Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74847.t1 | XP_013468913.1 | 99.1 | 334 | 3 | 0 | 1 | 334 | 1 | 334 | 6.10E-184 | 653.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74847.t1 | O04482 | 81.1 | 334 | 57 | 2 | 1 | 333 | 1 | 329 | 2.0e-151 | 536.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74847.t1 | A0A072VY12 | 99.1 | 334 | 3 | 0 | 1 | 334 | 1 | 334 | 4.4e-184 | 653.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74847 | MS.gene20187 | PPI |
| MS.gene32974 | MS.gene74847 | PPI |
| MS.gene74847 | MS.gene57218 | PPI |
| MS.gene74847 | MS.gene55853 | PPI |
| MS.gene74847 | MS.gene24542 | PPI |
| MS.gene74847 | MS.gene051630 | PPI |
| MS.gene06206 | MS.gene74847 | PPI |
| MS.gene048987 | MS.gene74847 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74847.t1 | MTR_1g078300 | 99.102 | 334 | 3 | 0 | 1 | 334 | 1 | 334 | 0.0 | 678 |
| MS.gene74847.t1 | MTR_1g078300 | 99.048 | 315 | 3 | 0 | 20 | 334 | 1 | 315 | 0.0 | 637 |
| MS.gene74847.t1 | MTR_4g100360 | 27.966 | 236 | 148 | 7 | 3 | 228 | 12 | 235 | 8.24e-19 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74847.t1 | AT1G65650 | 80.240 | 334 | 60 | 2 | 1 | 333 | 1 | 329 | 0.0 | 536 |
| MS.gene74847.t1 | AT5G16310 | 69.486 | 331 | 95 | 2 | 1 | 325 | 1 | 331 | 3.12e-176 | 491 |
| MS.gene74847.t1 | AT4G17510 | 29.741 | 232 | 139 | 10 | 3 | 222 | 13 | 232 | 1.10e-15 | 75.9 |
Find 78 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAGAAAGTTAAACAAAA+AGG | 0.236038 | 1.1:-58744264 | None:intergenic |
| CTGGTCTTGCAAAGCTATTA+TGG | 0.260960 | 1.1:-58743746 | None:intergenic |
| CTCAATTGCAGGCCTGTATA+CGG | 0.334622 | 1.1:+58743383 | MS.gene74847:intron |
| TGGTCTTGCAAAGCTATTAT+GGG | 0.354227 | 1.1:-58743745 | None:intergenic |
| ATAAGCTATCTACCTGTTGA+TGG | 0.361784 | 1.1:+58743828 | MS.gene74847:CDS |
| TACTGGTGGGCAAGGTGATA+TGG | 0.364077 | 1.1:+58743905 | MS.gene74847:CDS |
| GTGGTAAACATCATCATCTT+TGG | 0.371984 | 1.1:-58743802 | None:intergenic |
| TCCTCCCGAGCTCAAAGGTT+TGG | 0.375532 | 1.1:+58743692 | MS.gene74847:CDS |
| TGCTACTGAGAAGATCTTAA+TGG | 0.383992 | 1.1:+58744181 | MS.gene74847:CDS |
| CTGCTTGGCCTTCTCAATGA+GGG | 0.389121 | 1.1:-58744315 | None:intergenic |
| ATCAGCCTTGGCCAGTGTAC+TGG | 0.390779 | 1.1:+58743888 | MS.gene74847:CDS |
| GCTATTATGGGCTGCACGTA+TGG | 0.392820 | 1.1:-58743733 | None:intergenic |
| GAGCTCGGGAGGAAAGTTCT+TGG | 0.395084 | 1.1:-58743682 | None:intergenic |
| AATACCTTTCGATGCGTTCC+TGG | 0.397377 | 1.1:-58743956 | None:intergenic |
| AATGCAAGTGAAAGGGGTTC+AGG | 0.406139 | 1.1:+58740800 | MS.gene74847:CDS |
| TCTTCAGGGACAAAAGGTTC+TGG | 0.407299 | 1.1:-58743765 | None:intergenic |
| CTAAGGCTATTGAGAGCATC+GGG | 0.411036 | 1.1:-58743263 | None:intergenic |
| GTCTATTCTTCTTAATTCAC+CGG | 0.414307 | 1.1:+58743617 | MS.gene74847:CDS |
| AGCAGAAAACAAGCAGTTCT+CGG | 0.434141 | 1.1:+58744333 | MS.gene74847:CDS |
| TTCAGCAAATGCAAGTGAAA+GGG | 0.436137 | 1.1:+58740793 | MS.gene74847:CDS |
| CAAATGGCGCCCAGGGGAAA+AGG | 0.436593 | 1.1:+58743421 | MS.gene74847:CDS |
| TTCAAATTGGAATCATGTCT+TGG | 0.439779 | 1.1:+58740632 | None:intergenic |
| TCTCTCTCTGAAGTGAATGC+TGG | 0.450749 | 1.1:+58744149 | MS.gene74847:CDS |
| GATGGTGCAACCTGTGATCC+AGG | 0.455112 | 1.1:+58743938 | MS.gene74847:CDS |
| GGAGTATTGTATGAGCTTGA+TGG | 0.462854 | 1.1:+58743849 | MS.gene74847:CDS |
| TCCTTGCAATCGTTAAGAAC+AGG | 0.463915 | 1.1:+58744003 | MS.gene74847:CDS |
| GAAGAATAGACAAGATTGCC+TGG | 0.472116 | 1.1:-58743605 | None:intergenic |
| TCATACAATACTCCATCAAC+AGG | 0.475061 | 1.1:-58743840 | None:intergenic |
| CTCTCTCTGAAGTGAATGCT+GGG | 0.475955 | 1.1:+58744150 | MS.gene74847:CDS |
| GGTATTCACAAAATGAGATA+AGG | 0.477044 | 1.1:+58743973 | MS.gene74847:CDS |
| TGCATCGAAGGCAGAGAGAC+TGG | 0.478763 | 1.1:+58744094 | MS.gene74847:CDS |
| AGCCTTGGCCAGTGTACTGG+TGG | 0.481930 | 1.1:+58743891 | MS.gene74847:CDS |
| CCGATGCTCTCAATAGCCTT+AGG | 0.486610 | 1.1:+58743264 | MS.gene74847:CDS |
| TCTGCTTGGCCTTCTCAATG+AGG | 0.491137 | 1.1:-58744316 | None:intergenic |
| GCAGCAGCTGTCTGCATCGA+AGG | 0.492895 | 1.1:+58744082 | MS.gene74847:CDS |
| TTCAATGGGTATACCGGGAT+CGG | 0.495557 | 1.1:-58740668 | None:intergenic |
| TCGATGCGTTCCTGGATCAC+AGG | 0.497546 | 1.1:-58743948 | None:intergenic |
| ATAGCCAAACCTTTGAGCTC+GGG | 0.498036 | 1.1:-58743696 | None:intergenic |
| GGTAGAGGAACTGTACTCAT+TGG | 0.504617 | 1.1:+58743238 | MS.gene74847:intron |
| TGCACCATTGAATCCGATCC+CGG | 0.504762 | 1.1:+58740655 | MS.gene74847:CDS |
| AGTACACTGGCCAAGGCTGA+TGG | 0.508061 | 1.1:-58743886 | None:intergenic |
| TCCTGTTCTTAACGATTGCA+AGG | 0.509913 | 1.1:-58744004 | None:intergenic |
| TATACCGGGATCGGATTCAA+TGG | 0.513481 | 1.1:-58740659 | None:intergenic |
| TGCTTGGCCTTCTCAATGAG+GGG | 0.519958 | 1.1:-58744314 | None:intergenic |
| GATAGCCAAACCTTTGAGCT+CGG | 0.525007 | 1.1:-58743697 | None:intergenic |
| GTATGAGCTTGATGGATTGA+AGG | 0.525461 | 1.1:+58743857 | MS.gene74847:CDS |
| CTATTATGGGCTGCACGTAT+GGG | 0.528919 | 1.1:-58743732 | None:intergenic |
| ATTCAGCAAATGCAAGTGAA+AGG | 0.531846 | 1.1:+58740792 | MS.gene74847:CDS |
| TGAAGGAACTTCAAAAGAGA+AGG | 0.539822 | 1.1:+58744048 | MS.gene74847:CDS |
| AAGGAGGGTCCCATCAGCCT+TGG | 0.540379 | 1.1:+58743876 | MS.gene74847:CDS |
| GGCCAGTGTACTGGTGGGCA+AGG | 0.551431 | 1.1:+58743897 | MS.gene74847:CDS |
| AACTTTCCTCCCGAGCTCAA+AGG | 0.554321 | 1.1:+58743687 | MS.gene74847:CDS |
| GCCCACCAGTACACTGGCCA+AGG | 0.556849 | 1.1:-58743893 | None:intergenic |
| TCTGGACCAATGTCAACATC+CGG | 0.557238 | 1.1:-58743636 | None:intergenic |
| CCTAAGGCTATTGAGAGCAT+CGG | 0.559938 | 1.1:-58743264 | None:intergenic |
| GGTGTATACTTCCGAGCTGA+AGG | 0.562585 | 1.1:+58744031 | MS.gene74847:CDS |
| CAGGTAGATAGCTTATAAAG+TGG | 0.562822 | 1.1:-58743821 | None:intergenic |
| AATTCACCGGATGTTGACAT+TGG | 0.570784 | 1.1:+58743630 | MS.gene74847:CDS |
| GTACACTGGCCAAGGCTGAT+GGG | 0.571085 | 1.1:-58743885 | None:intergenic |
| CACCTTGCCCACCAGTACAC+TGG | 0.572504 | 1.1:-58743899 | None:intergenic |
| TAATAATGCTTGTGCAACCC+AGG | 0.579000 | 1.1:+58743587 | MS.gene74847:CDS |
| TCAGCAAATGCAAGTGAAAG+GGG | 0.591308 | 1.1:+58740794 | MS.gene74847:CDS |
| GCCTTGGCCAGTGTACTGGT+GGG | 0.596712 | 1.1:+58743892 | MS.gene74847:CDS |
| AAGAATAGACAAGATTGCCT+GGG | 0.602580 | 1.1:-58743604 | None:intergenic |
| GAAGGAACTTCAAAAGAGAA+GGG | 0.605269 | 1.1:+58744049 | MS.gene74847:CDS |
| GCCAAACCTTTGAGCTCGGG+AGG | 0.610846 | 1.1:-58743693 | None:intergenic |
| GTTGAAGCCCCTCATTGAGA+AGG | 0.617051 | 1.1:+58744307 | MS.gene74847:CDS |
| GGAGGACAGAAAATATTCGT+AGG | 0.623650 | 1.1:+58744225 | MS.gene74847:CDS |
| AATCGTTAAGAACAGGAAAG+AGG | 0.624792 | 1.1:+58744010 | MS.gene74847:CDS |
| AACTTCAAAAGAGAAGGGAG+CGG | 0.625720 | 1.1:+58744054 | MS.gene74847:CDS |
| GTGGGCAAGGTGATATGGAA+TGG | 0.627230 | 1.1:+58743910 | MS.gene74847:CDS |
| TGATCCAGGAACGCATCGAA+AGG | 0.631333 | 1.1:+58743952 | MS.gene74847:CDS |
| TGATATGGAATGGCTTAAGA+TGG | 0.636787 | 1.1:+58743920 | MS.gene74847:CDS |
| TACTGAGAAGATCTTAATGG+AGG | 0.661434 | 1.1:+58744184 | MS.gene74847:CDS |
| GAGCTTGATGGATTGAAGGA+GGG | 0.662500 | 1.1:+58743861 | MS.gene74847:CDS |
| TGAGCTTGATGGATTGAAGG+AGG | 0.679530 | 1.1:+58743860 | MS.gene74847:CDS |
| ATCGAAGGCAGAGAGACTGG+TGG | 0.735051 | 1.1:+58744097 | MS.gene74847:CDS |
| TAAGGCTATTGAGAGCATCG+GGG | 0.777245 | 1.1:-58743262 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAAATTTTCAACTAA+AGG | + | chr1.1:58742320-58742339 | MS.gene74847:intron | 10.0% |
| !!! | AATTTAAATTTTCAACTAAA+GGG | + | chr1.1:58742321-58742340 | MS.gene74847:intron | 10.0% |
| !!! | TTTATTTTTTAACTATTTCT+TGG | - | chr1.1:58742758-58742777 | None:intergenic | 10.0% |
| !! | AGAAAAATTAAAAAGCAAAA+AGG | + | chr1.1:58742848-58742867 | MS.gene74847:intron | 15.0% |
| !! | CTAGAAATGTTAAAAAAAAA+TGG | - | chr1.1:58741489-58741508 | None:intergenic | 15.0% |
| !! | TAGATAGAAAATGAAAATTA+AGG | + | chr1.1:58742620-58742639 | MS.gene74847:intron | 15.0% |
| !! | TATTATTAATGTTGTGTTTA+GGG | + | chr1.1:58740707-58740726 | MS.gene74847:intron | 15.0% |
| !! | TGTTATAAATGTATGAAAAT+AGG | + | chr1.1:58742796-58742815 | MS.gene74847:intron | 15.0% |
| !! | TTAAGAAAGTTAAACAAAAA+GGG | - | chr1.1:58744266-58744285 | None:intergenic | 15.0% |
| !! | TTATTATTAATGTTGTGTTT+AGG | + | chr1.1:58740706-58740725 | MS.gene74847:intron | 15.0% |
| !! | TTCAATTCAAAAAATTCAAT+GGG | - | chr1.1:58740685-58740704 | None:intergenic | 15.0% |
| !! | TTGATATGTAAAAAAACTTT+GGG | + | chr1.1:58741264-58741283 | MS.gene74847:intron | 15.0% |
| !! | TTTCAATTCAAAAAATTCAA+TGG | - | chr1.1:58740686-58740705 | None:intergenic | 15.0% |
| !!! | AAATATATTTGGAATAAAAG+AGG | + | chr1.1:58741650-58741669 | MS.gene74847:intron | 15.0% |
| !!! | CATTTTTTTTTAACATTTCT+AGG | + | chr1.1:58741487-58741506 | MS.gene74847:intron | 15.0% |
| !!! | GATTAATTTTTCTTTTCAAA+TGG | + | chr1.1:58743405-58743424 | MS.gene74847:CDS | 15.0% |
| !!! | TAATTTTCATTTTCTATCTA+CGG | - | chr1.1:58742620-58742639 | None:intergenic | 15.0% |
| !!! | TTATTCCAAATATATTTTAG+AGG | - | chr1.1:58741647-58741666 | None:intergenic | 15.0% |
| !!! | TTTTAGTTTTACTAATCTTA+TGG | + | chr1.1:58743547-58743566 | MS.gene74847:intron | 15.0% |
| !! | ATAAGAGTAAATCTTCAATT+TGG | + | chr1.1:58741973-58741992 | MS.gene74847:intron | 20.0% |
| !! | ATGAACAATAGATAAAAGTA+GGG | + | chr1.1:58742422-58742441 | MS.gene74847:intron | 20.0% |
| !! | ATTCTTAAAAGAAAATAACC+TGG | - | chr1.1:58743496-58743515 | None:intergenic | 20.0% |
| !! | ATTGTATTAAATCCATAAAG+TGG | + | chr1.1:58742267-58742286 | MS.gene74847:intron | 20.0% |
| !! | ATTTGATTAAATTGAAATGC+TGG | - | chr1.1:58741824-58741843 | None:intergenic | 20.0% |
| !! | CATATACTAAAAATTCTAAC+TGG | - | chr1.1:58743190-58743209 | None:intergenic | 20.0% |
| !! | CTTAAGAAAGTTAAACAAAA+AGG | - | chr1.1:58744267-58744286 | None:intergenic | 20.0% |
| !! | CTTGATATGTAAAAAAACTT+TGG | + | chr1.1:58741263-58741282 | MS.gene74847:intron | 20.0% |
| !! | GATTTAATACAATATTACAC+TGG | - | chr1.1:58742260-58742279 | None:intergenic | 20.0% |
| !!! | AACTTTTGAAATCATTATCA+GGG | + | chr1.1:58741438-58741457 | MS.gene74847:intron | 20.0% |
| !!! | AATGTCCTCTAAAATATATT+TGG | + | chr1.1:58741639-58741658 | MS.gene74847:intron | 20.0% |
| !!! | ACAATTTTTTTCCTTTTCAA+TGG | + | chr1.1:58743092-58743111 | MS.gene74847:intron | 20.0% |
| !!! | GTGCATTTTATGTAATTATT+TGG | - | chr1.1:58741850-58741869 | None:intergenic | 20.0% |
| !!! | GTTGTTTTACTTCTTAATTT+TGG | - | chr1.1:58741758-58741777 | None:intergenic | 20.0% |
| ! | AAAAAATTCAATGGGTATAC+CGG | - | chr1.1:58740677-58740696 | None:intergenic | 25.0% |
| ! | AACAAAAGCTAAAAACAATG+AGG | - | chr1.1:58740846-58740865 | None:intergenic | 25.0% |
| ! | AAGAGAAATTCAAAAAATGG+AGG | + | chr1.1:58744207-58744226 | MS.gene74847:CDS | 25.0% |
| ! | AATCCTAACAAATGCTAATT+GGG | + | chr1.1:58741192-58741211 | MS.gene74847:intron | 25.0% |
| ! | AATCTTATGGATTCATTTGT+AGG | + | chr1.1:58743560-58743579 | MS.gene74847:intron | 25.0% |
| ! | ACAAAAGCTAAAAACAATGA+GGG | - | chr1.1:58740845-58740864 | None:intergenic | 25.0% |
| ! | AGAAAAATTAATCCGTATAC+AGG | - | chr1.1:58743398-58743417 | None:intergenic | 25.0% |
| ! | AGGAAGAGAAATTCAAAAAA+TGG | + | chr1.1:58744204-58744223 | MS.gene74847:CDS | 25.0% |
| ! | CAAAGAGTAAACCTTAAATT+TGG | - | chr1.1:58742220-58742239 | None:intergenic | 25.0% |
| ! | CATGAACAATAGATAAAAGT+AGG | + | chr1.1:58742421-58742440 | MS.gene74847:intron | 25.0% |
| ! | GATAGATTGAGAATAGTTTA+GGG | + | chr1.1:58742135-58742154 | MS.gene74847:intron | 25.0% |
| ! | GCAAAAAATAAGTTAGGATT+GGG | - | chr1.1:58743470-58743489 | None:intergenic | 25.0% |
| ! | GTATGAAAATAGGAAATGAA+AGG | + | chr1.1:58742806-58742825 | MS.gene74847:intron | 25.0% |
| ! | TAATCCTAACAAATGCTAAT+TGG | + | chr1.1:58741191-58741210 | MS.gene74847:intron | 25.0% |
| ! | TACATACAACGTATACATAA+CGG | - | chr1.1:58742493-58742512 | None:intergenic | 25.0% |
| ! | TGATAGATTGAGAATAGTTT+AGG | + | chr1.1:58742134-58742153 | MS.gene74847:intron | 25.0% |
| ! | TGCAAAAAATAAGTTAGGAT+TGG | - | chr1.1:58743471-58743490 | None:intergenic | 25.0% |
| !! | ATTATATTTCTATAGCTCAG+AGG | + | chr1.1:58742163-58742182 | MS.gene74847:intron | 25.0% |
| !! | CTATAAAAATGAAGTGTTAG+AGG | - | chr1.1:58741238-58741257 | None:intergenic | 25.0% |
| !! | CTTTTCAACAAAAATTGTAG+TGG | - | chr1.1:58741784-58741803 | None:intergenic | 25.0% |
| !! | TATTTAACTTCAAATACCAC+AGG | - | chr1.1:58741956-58741975 | None:intergenic | 25.0% |
| !! | TTATCATTTTCGATAGTTCA+AGG | - | chr1.1:58742027-58742046 | None:intergenic | 25.0% |
| !! | TTTCTGATAGTTTTCTGATT+TGG | - | chr1.1:58743046-58743065 | None:intergenic | 25.0% |
| !!! | AAAAAACTTTGGGAGAATTT+TGG | + | chr1.1:58741274-58741293 | MS.gene74847:intron | 25.0% |
| !!! | ACTTTTGAAATCATTATCAG+GGG | + | chr1.1:58741439-58741458 | MS.gene74847:intron | 25.0% |
| !!! | GAACTTTTGAAATCATTATC+AGG | + | chr1.1:58741437-58741456 | MS.gene74847:intron | 25.0% |
| AAAAATTCAATGGGTATACC+GGG | - | chr1.1:58740676-58740695 | None:intergenic | 30.0% | |
| ACATACAACGTATACATAAC+GGG | - | chr1.1:58742492-58742511 | None:intergenic | 30.0% | |
| AGAACCTAAATATCCTAAAG+AGG | - | chr1.1:58740870-58740889 | None:intergenic | 30.0% | |
| AGAATACCTCTGTAAATATC+AGG | + | chr1.1:58743132-58743151 | MS.gene74847:intron | 30.0% | |
| ATAAGTTCAGTAAAAACACC+TGG | - | chr1.1:58740774-58740793 | None:intergenic | 30.0% | |
| CTAAAAATTCTAACTGGACT+AGG | - | chr1.1:58743184-58743203 | None:intergenic | 30.0% | |
| GAATACCTCTGTAAATATCA+GGG | + | chr1.1:58743133-58743152 | MS.gene74847:intron | 30.0% | |
| GGTATTCACAAAATGAGATA+AGG | + | chr1.1:58743973-58743992 | MS.gene74847:CDS | 30.0% | |
| GGTTTACTCTTTGCAATAAA+AGG | + | chr1.1:58742227-58742246 | MS.gene74847:intron | 30.0% | |
| GTATTAAATCCATAAAGTGG+TGG | + | chr1.1:58742270-58742289 | MS.gene74847:intron | 30.0% | |
| GTCTATTCTTCTTAATTCAC+CGG | + | chr1.1:58743617-58743636 | MS.gene74847:CDS | 30.0% | |
| TAAGTTCAGTAAAAACACCT+GGG | - | chr1.1:58740773-58740792 | None:intergenic | 30.0% | |
| TAGTTTACGGACCAAATTTA+AGG | + | chr1.1:58742206-58742225 | MS.gene74847:intron | 30.0% | |
| TCCTAAAGAAAGTAAGTATC+CGG | + | chr1.1:58741577-58741596 | MS.gene74847:intron | 30.0% | |
| TGTAAACAAGTTCGAAAATG+TGG | + | chr1.1:58742889-58742908 | MS.gene74847:intron | 30.0% | |
| ! | TAAACATGACTGATTCAAGA+CGG | - | chr1.1:58741730-58741749 | None:intergenic | 30.0% |
| ! | TAGGATATTTAGGTTCTGTT+TGG | + | chr1.1:58740873-58740892 | MS.gene74847:intron | 30.0% |
| ! | TCAACAAAAATTGTAGTGGA+TGG | - | chr1.1:58741780-58741799 | None:intergenic | 30.0% |
| ! | TCTGTTTTCATAAGCTATCT+TGG | - | chr1.1:58741005-58741024 | None:intergenic | 30.0% |
| ! | TGGCTTGCAAAAAATAAGTT+AGG | - | chr1.1:58743476-58743495 | None:intergenic | 30.0% |
| !! | GTATTGTGTTTTGTTAGAGA+GGG | - | chr1.1:58741902-58741921 | None:intergenic | 30.0% |
| !! | GTTTCCTCTTTAGGATATTT+AGG | + | chr1.1:58740863-58740882 | MS.gene74847:intron | 30.0% |
| !! | TATTGTGTTTTGTTAGAGAG+GGG | - | chr1.1:58741901-58741920 | None:intergenic | 30.0% |
| !! | TGATATTTACAGAGGTATTC+TGG | - | chr1.1:58743133-58743152 | None:intergenic | 30.0% |
| !! | TGTATTGTGTTTTGTTAGAG+AGG | - | chr1.1:58741903-58741922 | None:intergenic | 30.0% |
| !! | TTAGCTTTTGTTTCCTCTTT+AGG | + | chr1.1:58740854-58740873 | MS.gene74847:intron | 30.0% |
| !!! | CTTTTGAAATCATTATCAGG+GGG | + | chr1.1:58741440-58741459 | MS.gene74847:intron | 30.0% |
| !!! | TAACTTATTTTTTGCAAGCC+AGG | + | chr1.1:58743475-58743494 | MS.gene74847:CDS | 30.0% |
| !!! | TGCATAACTTATTTTTGACG+TGG | + | chr1.1:58741083-58741102 | MS.gene74847:intron | 30.0% |
| !!! | TTTTGAAATCATTATCAGGG+GGG | + | chr1.1:58741441-58741460 | MS.gene74847:intron | 30.0% |
| AAAGTAAGTATCCGGTTAGA+GGG | + | chr1.1:58741585-58741604 | MS.gene74847:intron | 35.0% | |
| AACAAGTTCGAAAATGTGGA+AGG | + | chr1.1:58742893-58742912 | MS.gene74847:intron | 35.0% | |
| AACCACTTGTTTGACTGTTT+GGG | + | chr1.1:58740926-58740945 | MS.gene74847:intron | 35.0% | |
| AAGAATAGACAAGATTGCCT+GGG | - | chr1.1:58743607-58743626 | None:intergenic | 35.0% | |
| AAGTTCAGTAAAAACACCTG+GGG | - | chr1.1:58740772-58740791 | None:intergenic | 35.0% | |
| AATAAGCTGTTTACGCAAAC+AGG | + | chr1.1:58741386-58741405 | MS.gene74847:intron | 35.0% | |
| AATCGTTAAGAACAGGAAAG+AGG | + | chr1.1:58744010-58744029 | MS.gene74847:CDS | 35.0% | |
| ACAAGTTCGAAAATGTGGAA+GGG | + | chr1.1:58742894-58742913 | MS.gene74847:intron | 35.0% | |
| ACAGCTAATTTGATCCATCT+GGG | + | chr1.1:58743010-58743029 | MS.gene74847:intron | 35.0% | |
| ACCGGATACTTACTTTCTTT+AGG | - | chr1.1:58741581-58741600 | None:intergenic | 35.0% | |
| AGAGAGGAAGTGATAGTTTA+CGG | + | chr1.1:58742193-58742212 | MS.gene74847:intron | 35.0% | |
| ATAAGCTATCTACCTGTTGA+TGG | + | chr1.1:58743828-58743847 | MS.gene74847:CDS | 35.0% | |
| ATAAGCTGTTTACGCAAACA+GGG | + | chr1.1:58741387-58741406 | MS.gene74847:intron | 35.0% | |
| ATGATAAGTGTGGTTATGTC+AGG | - | chr1.1:58741339-58741358 | None:intergenic | 35.0% | |
| ATTCAGCAAATGCAAGTGAA+AGG | + | chr1.1:58740792-58740811 | MS.gene74847:CDS | 35.0% | |
| ATTTGCTTGACATGCTCATT+TGG | + | chr1.1:58741415-58741434 | MS.gene74847:intron | 35.0% | |
| CAGAATGCATTCCATTGAAA+AGG | - | chr1.1:58743106-58743125 | None:intergenic | 35.0% | |
| CAGGTAGATAGCTTATAAAG+TGG | - | chr1.1:58743824-58743843 | None:intergenic | 35.0% | |
| CTGAAGACTTTCACAAAATC+AGG | - | chr1.1:58741537-58741556 | None:intergenic | 35.0% | |
| GAAGGAACTTCAAAAGAGAA+GGG | + | chr1.1:58744049-58744068 | MS.gene74847:CDS | 35.0% | |
| GAATAAAAGAGGATGTGACT+AGG | + | chr1.1:58741661-58741680 | MS.gene74847:intron | 35.0% | |
| GGACAAAGAGTTATAGTTCA+TGG | + | chr1.1:58742104-58742123 | MS.gene74847:intron | 35.0% | |
| GTGGTAAACATCATCATCTT+TGG | - | chr1.1:58743805-58743824 | None:intergenic | 35.0% | |
| TAACCACTTGTTTGACTGTT+TGG | + | chr1.1:58740925-58740944 | MS.gene74847:intron | 35.0% | |
| TACAGCTAATTTGATCCATC+TGG | + | chr1.1:58743009-58743028 | MS.gene74847:intron | 35.0% | |
| TACTGAGAAGATCTTAATGG+AGG | + | chr1.1:58744184-58744203 | MS.gene74847:CDS | 35.0% | |
| TCATACAATACTCCATCAAC+AGG | - | chr1.1:58743843-58743862 | None:intergenic | 35.0% | |
| TCATGCTTGCTTATCTGAAA+AGG | - | chr1.1:58742406-58742425 | None:intergenic | 35.0% | |
| TGAACATTTGTCTGCTCTAT+GGG | + | chr1.1:58743351-58743370 | MS.gene74847:intron | 35.0% | |
| TGAAGGAACTTCAAAAGAGA+AGG | + | chr1.1:58744048-58744067 | MS.gene74847:CDS | 35.0% | |
| TGATAAGTGTGGTTATGTCA+GGG | - | chr1.1:58741338-58741357 | None:intergenic | 35.0% | |
| TGATATGGAATGGCTTAAGA+TGG | + | chr1.1:58743920-58743939 | MS.gene74847:CDS | 35.0% | |
| TGCTACTGAGAAGATCTTAA+TGG | + | chr1.1:58744181-58744200 | MS.gene74847:CDS | 35.0% | |
| TGTCCCAATTAGCATTTGTT+AGG | - | chr1.1:58741198-58741217 | None:intergenic | 35.0% | |
| TTCAGCAAATGCAAGTGAAA+GGG | + | chr1.1:58740793-58740812 | MS.gene74847:CDS | 35.0% | |
| ! | ATTTTCAACTAAAGGGACGA+AGG | + | chr1.1:58742328-58742347 | MS.gene74847:intron | 35.0% |
| ! | CCTATTTTGTAAGTAACCGA+GGG | - | chr1.1:58742086-58742105 | None:intergenic | 35.0% |
| ! | CGGTCTTGAACTTTTAATGA+TGG | + | chr1.1:58743305-58743324 | MS.gene74847:intron | 35.0% |
| ! | TCCTATTTTGTAAGTAACCG+AGG | - | chr1.1:58742087-58742106 | None:intergenic | 35.0% |
| ! | TGGTCTTGCAAAGCTATTAT+GGG | - | chr1.1:58743748-58743767 | None:intergenic | 35.0% |
| !! | AATCTTTCAAGTTAGTCCCT+CGG | + | chr1.1:58742067-58742086 | MS.gene74847:intron | 35.0% |
| !! | TCTTTCAGTTTTGTCAACTC+TGG | - | chr1.1:58743657-58743676 | None:intergenic | 35.0% |
| AACTTCAAAAGAGAAGGGAG+CGG | + | chr1.1:58744054-58744073 | MS.gene74847:CDS | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | - | chr1.1:58740994-58741013 | None:intergenic | 40.0% | |
| AATTCACCGGATGTTGACAT+TGG | + | chr1.1:58743630-58743649 | MS.gene74847:CDS | 40.0% | |
| ACTAGGAATAAGACAGGCAA+AGG | + | chr1.1:58741678-58741697 | MS.gene74847:intron | 40.0% | |
| AGCAGAAAACAAGCAGTTCT+CGG | + | chr1.1:58744333-58744352 | MS.gene74847:CDS | 40.0% | |
| AGCGCTTATCATGATAAGTG+TGG | - | chr1.1:58741349-58741368 | None:intergenic | 40.0% | |
| ATAGCATTGCTATAGACTGG+TGG | + | chr1.1:58742377-58742396 | MS.gene74847:intron | 40.0% | |
| ATTTACAAGAGGTTCCCATG+AGG | + | chr1.1:58742528-58742547 | MS.gene74847:intron | 40.0% | |
| CAAGTTCGAAAATGTGGAAG+GGG | + | chr1.1:58742895-58742914 | MS.gene74847:intron | 40.0% | |
| CAGAACCCTGATATTTACAG+AGG | - | chr1.1:58743141-58743160 | None:intergenic | 40.0% | |
| CCAAGACATATCTAGCATGT+GGG | - | chr1.1:58743216-58743235 | None:intergenic | 40.0% | |
| CCCTCGGTTACTTACAAAAT+AGG | + | chr1.1:58742083-58742102 | MS.gene74847:intron | 40.0% | |
| CTATCACTTCCTCTCTCATT+TGG | - | chr1.1:58742189-58742208 | None:intergenic | 40.0% | |
| CTCATAGCATTGCTATAGAC+TGG | + | chr1.1:58742374-58742393 | MS.gene74847:intron | 40.0% | |
| GAAAGTAAGTATCCGGTTAG+AGG | + | chr1.1:58741584-58741603 | MS.gene74847:intron | 40.0% | |
| GAACATTTGTCTGCTCTATG+GGG | + | chr1.1:58743352-58743371 | MS.gene74847:intron | 40.0% | |
| GAAGAATAGACAAGATTGCC+TGG | - | chr1.1:58743608-58743627 | None:intergenic | 40.0% | |
| GATAAGTGTGGTTATGTCAG+GGG | - | chr1.1:58741337-58741356 | None:intergenic | 40.0% | |
| GATGTGACTAGGAATAAGAC+AGG | + | chr1.1:58741672-58741691 | MS.gene74847:intron | 40.0% | |
| GCTTTACCTGGATTTACAAG+AGG | + | chr1.1:58742517-58742536 | MS.gene74847:intron | 40.0% | |
| GGAGGACAGAAAATATTCGT+AGG | + | chr1.1:58744225-58744244 | MS.gene74847:CDS | 40.0% | |
| GTGAACATTTGTCTGCTCTA+TGG | + | chr1.1:58743350-58743369 | MS.gene74847:intron | 40.0% | |
| TAATAATGCTTGTGCAACCC+AGG | + | chr1.1:58743587-58743606 | MS.gene74847:CDS | 40.0% | |
| TCAGCAAATGCAAGTGAAAG+GGG | + | chr1.1:58740794-58740813 | MS.gene74847:CDS | 40.0% | |
| TCCTGTTCTTAACGATTGCA+AGG | - | chr1.1:58744007-58744026 | None:intergenic | 40.0% | |
| TCCTTGCAATCGTTAAGAAC+AGG | + | chr1.1:58744003-58744022 | MS.gene74847:CDS | 40.0% | |
| TGAGATAGTACACTGACCTA+AGG | - | chr1.1:58743283-58743302 | None:intergenic | 40.0% | |
| TGTATGTAGACAGCTTTACC+TGG | + | chr1.1:58742505-58742524 | MS.gene74847:intron | 40.0% | |
| TTGAAATGCTGGCATCTTCA+AGG | - | chr1.1:58741813-58741832 | None:intergenic | 40.0% | |
| ! | TTTTGCTCTTCAGGGACAAA+AGG | - | chr1.1:58743774-58743793 | None:intergenic | 40.0% |
| ! | TTTTGTCCCTGAAGAGCAAA+AGG | + | chr1.1:58743773-58743792 | MS.gene74847:CDS | 40.0% |
| !! | ACTTTGGGAGAATTTTGGTG+TGG | + | chr1.1:58741279-58741298 | MS.gene74847:intron | 40.0% |
| !! | AGAACTGCTTGTTTTCTGCT+TGG | - | chr1.1:58744333-58744352 | None:intergenic | 40.0% |
| !! | CTGGTCTTGCAAAGCTATTA+TGG | - | chr1.1:58743749-58743768 | None:intergenic | 40.0% |
| !! | GGAGTATTGTATGAGCTTGA+TGG | + | chr1.1:58743849-58743868 | MS.gene74847:CDS | 40.0% |
| !! | GTATGAGCTTGATGGATTGA+AGG | + | chr1.1:58743857-58743876 | MS.gene74847:CDS | 40.0% |
| !!! | CTTTTGAAGTTCCTTCAGCT+CGG | - | chr1.1:58744045-58744064 | None:intergenic | 40.0% |
| AAAAACACCTGGGGAGAAAG+AGG | - | chr1.1:58740763-58740782 | None:intergenic | 45.0% | |
| AAAACACCTGGGGAGAAAGA+GGG | - | chr1.1:58740762-58740781 | None:intergenic | 45.0% | |
| AATACCTTTCGATGCGTTCC+TGG | - | chr1.1:58743959-58743978 | None:intergenic | 45.0% | |
| AATGCAAGTGAAAGGGGTTC+AGG | + | chr1.1:58740800-58740819 | MS.gene74847:CDS | 45.0% | |
| AGATATGTCTTGGCAGGTAG+AGG | + | chr1.1:58743223-58743242 | MS.gene74847:intron | 45.0% | |
| ATACCACAGGACAATGTCTG+AGG | - | chr1.1:58741943-58741962 | None:intergenic | 45.0% | |
| ATAGCCAAACCTTTGAGCTC+GGG | - | chr1.1:58743699-58743718 | None:intergenic | 45.0% | |
| ATCTACGGTTCCTGCTTGAA+GGG | - | chr1.1:58742605-58742624 | None:intergenic | 45.0% | |
| ATGCAATTCATGGCTAGGTG+TGG | - | chr1.1:58741311-58741330 | None:intergenic | 45.0% | |
| CATGCTAGATATGTCTTGGC+AGG | + | chr1.1:58743217-58743236 | MS.gene74847:intron | 45.0% | |
| CCCACATGCTAGATATGTCT+TGG | + | chr1.1:58743213-58743232 | MS.gene74847:intron | 45.0% | |
| CTCAATTGCAGGCCTGTATA+CGG | + | chr1.1:58743383-58743402 | MS.gene74847:intron | 45.0% | |
| CTCCCAAACAGTCAAACAAG+TGG | - | chr1.1:58740931-58740950 | None:intergenic | 45.0% | |
| CTTCCAGAAAAGCTTGTGTG+TGG | + | chr1.1:58742929-58742948 | MS.gene74847:intron | 45.0% | |
| GATAGCCAAACCTTTGAGCT+CGG | - | chr1.1:58743700-58743719 | None:intergenic | 45.0% | |
| GCCAAGACATATCTAGCATG+TGG | - | chr1.1:58743217-58743236 | None:intergenic | 45.0% | |
| GCTATGTGATGAAGAGGTCA+TGG | - | chr1.1:58742554-58742573 | None:intergenic | 45.0% | |
| GCTGTAGCTATGTGATGAAG+AGG | - | chr1.1:58742560-58742579 | None:intergenic | 45.0% | |
| GGTAGAGGAACTGTACTCAT+TGG | + | chr1.1:58743238-58743257 | MS.gene74847:intron | 45.0% | |
| GGTCAGTGTACTATCTCAGT+CGG | + | chr1.1:58743285-58743304 | MS.gene74847:intron | 45.0% | |
| TATACCGGGATCGGATTCAA+TGG | - | chr1.1:58740662-58740681 | None:intergenic | 45.0% | |
| TATCTACGGTTCCTGCTTGA+AGG | - | chr1.1:58742606-58742625 | None:intergenic | 45.0% | |
| TCCTTCACTCCACCACTTTA+TGG | - | chr1.1:58742282-58742301 | None:intergenic | 45.0% | |
| TCTGGACCAATGTCAACATC+CGG | - | chr1.1:58743639-58743658 | None:intergenic | 45.0% | |
| TCTTCAGGGACAAAAGGTTC+TGG | - | chr1.1:58743768-58743787 | None:intergenic | 45.0% | |
| TGGGAACCTCTTGTAAATCC+AGG | - | chr1.1:58742526-58742545 | None:intergenic | 45.0% | |
| TTCAACTAAAGGGACGAAGG+TGG | + | chr1.1:58742331-58742350 | MS.gene74847:intron | 45.0% | |
| TTCAATGGGTATACCGGGAT+CGG | - | chr1.1:58740671-58740690 | None:intergenic | 45.0% | |
| TTGGTTGTGACAATCCCAGA+TGG | - | chr1.1:58743027-58743046 | None:intergenic | 45.0% | |
| ! | CACACACAAGCTTTTCTGGA+AGG | - | chr1.1:58742931-58742950 | None:intergenic | 45.0% |
| ! | CCTAAGGCTATTGAGAGCAT+CGG | - | chr1.1:58743267-58743286 | None:intergenic | 45.0% |
| ! | CTATTATGGGCTGCACGTAT+GGG | - | chr1.1:58743735-58743754 | None:intergenic | 45.0% |
| ! | GAAGAGGGAGTGTACTACTA+GGG | + | chr1.1:58741607-58741626 | MS.gene74847:intron | 45.0% |
| ! | TAGCAGCCTTTTGCTCTTCA+GGG | - | chr1.1:58743782-58743801 | None:intergenic | 45.0% |
| ! | TCCATAAAGTGGTGGAGTGA+AGG | + | chr1.1:58742278-58742297 | MS.gene74847:intron | 45.0% |
| ! | TTCTTTTCAAATGGCGCCCA+GGG | + | chr1.1:58743414-58743433 | MS.gene74847:CDS | 45.0% |
| ! | TTTCTTTTCAAATGGCGCCC+AGG | + | chr1.1:58743413-58743432 | MS.gene74847:CDS | 45.0% |
| !! | CTAAGGCTATTGAGAGCATC+GGG | - | chr1.1:58743266-58743285 | None:intergenic | 45.0% |
| !! | CTCTCTCTGAAGTGAATGCT+GGG | + | chr1.1:58744150-58744169 | MS.gene74847:CDS | 45.0% |
| !! | GAGCTTGATGGATTGAAGGA+GGG | + | chr1.1:58743861-58743880 | MS.gene74847:CDS | 45.0% |
| !! | TAAGGCTATTGAGAGCATCG+GGG | - | chr1.1:58743265-58743284 | None:intergenic | 45.0% |
| !! | TCTCTCTCTGAAGTGAATGC+TGG | + | chr1.1:58744149-58744168 | MS.gene74847:CDS | 45.0% |
| !! | TGAGCTTGATGGATTGAAGG+AGG | + | chr1.1:58743860-58743879 | MS.gene74847:CDS | 45.0% |
| !!! | TTTTTTCCCTCTTTCTCCCC+AGG | + | chr1.1:58740753-58740772 | MS.gene74847:intron | 45.0% |
| AACTTTCCTCCCGAGCTCAA+AGG | + | chr1.1:58743687-58743706 | MS.gene74847:CDS | 50.0% | |
| AAGTGTGGTTATGTCAGGGG+AGG | - | chr1.1:58741334-58741353 | None:intergenic | 50.0% | |
| ACCATAGACTCCAGCATGGA+AGG | - | chr1.1:58742460-58742479 | None:intergenic | 50.0% | |
| AGTATCCGGTTAGAGGGAAG+AGG | + | chr1.1:58741591-58741610 | MS.gene74847:intron | 50.0% | |
| AGTCCTCAGACATTGTCCTG+TGG | + | chr1.1:58741937-58741956 | MS.gene74847:intron | 50.0% | |
| ATGAAGAGGTCATGGCCTCA+TGG | - | chr1.1:58742546-58742565 | None:intergenic | 50.0% | |
| CCGATGCTCTCAATAGCCTT+AGG | + | chr1.1:58743264-58743283 | MS.gene74847:CDS | 50.0% | |
| CGAAAATGTGGAAGGGGATG+TGG | + | chr1.1:58742901-58742920 | MS.gene74847:intron | 50.0% | |
| GGAGGATGCAATTCATGGCT+AGG | - | chr1.1:58741316-58741335 | None:intergenic | 50.0% | |
| GGGTTTCCACACTCAATTGC+AGG | + | chr1.1:58743372-58743391 | MS.gene74847:intron | 50.0% | |
| GGTGTATACTTCCGAGCTGA+AGG | + | chr1.1:58744031-58744050 | MS.gene74847:CDS | 50.0% | |
| GTATCCGGTTAGAGGGAAGA+GGG | + | chr1.1:58741592-58741611 | MS.gene74847:intron | 50.0% | |
| GTGGGCAAGGTGATATGGAA+TGG | + | chr1.1:58743910-58743929 | MS.gene74847:CDS | 50.0% | |
| GTTGAAGCCCCTCATTGAGA+AGG | + | chr1.1:58744307-58744326 | MS.gene74847:CDS | 50.0% | |
| TACAGGCCTGCAATTGAGTG+TGG | - | chr1.1:58743381-58743400 | None:intergenic | 50.0% | |
| TCAGGGGAGGATGCAATTCA+TGG | - | chr1.1:58741321-58741340 | None:intergenic | 50.0% | |
| TCCAGCATGGAAGGAGTCTT+AGG | - | chr1.1:58742451-58742470 | None:intergenic | 50.0% | |
| TCCTAAGACTCCTTCCATGC+TGG | + | chr1.1:58742447-58742466 | MS.gene74847:intron | 50.0% | |
| TCCTTCCATGCTGGAGTCTA+TGG | + | chr1.1:58742456-58742475 | MS.gene74847:intron | 50.0% | |
| TCTACGGTTCCTGCTTGAAG+GGG | - | chr1.1:58742604-58742623 | None:intergenic | 50.0% | |
| TGAAGAGGTCATGGCCTCAT+GGG | - | chr1.1:58742545-58742564 | None:intergenic | 50.0% | |
| TGATCCAGGAACGCATCGAA+AGG | + | chr1.1:58743952-58743971 | MS.gene74847:CDS | 50.0% | |
| TGCACCATTGAATCCGATCC+CGG | + | chr1.1:58740655-58740674 | MS.gene74847:CDS | 50.0% | |
| ! | AGGCTGCTCAGTCTCTTTTC+AGG | + | chr1.1:58741698-58741717 | MS.gene74847:intron | 50.0% |
| ! | CACGTTCATCCTTTTCCCCT+GGG | - | chr1.1:58743433-58743452 | None:intergenic | 50.0% |
| ! | CTGCCACACACAAGCTTTTC+TGG | - | chr1.1:58742935-58742954 | None:intergenic | 50.0% |
| ! | CTGCTTGGCCTTCTCAATGA+GGG | - | chr1.1:58744318-58744337 | None:intergenic | 50.0% |
| ! | GCTATTATGGGCTGCACGTA+TGG | - | chr1.1:58743736-58743755 | None:intergenic | 50.0% |
| ! | GGAAGAGGGAGTGTACTACT+AGG | + | chr1.1:58741606-58741625 | MS.gene74847:intron | 50.0% |
| ! | GTAGCAGCCTTTTGCTCTTC+AGG | - | chr1.1:58743783-58743802 | None:intergenic | 50.0% |
| ! | TACTGGTGGGCAAGGTGATA+TGG | + | chr1.1:58743905-58743924 | MS.gene74847:CDS | 50.0% |
| ! | TCTGCTTGGCCTTCTCAATG+AGG | - | chr1.1:58744319-58744338 | None:intergenic | 50.0% |
| ! | TCTTTTCAAATGGCGCCCAG+GGG | + | chr1.1:58743415-58743434 | MS.gene74847:CDS | 50.0% |
| ! | TGCTTGGCCTTCTCAATGAG+GGG | - | chr1.1:58744317-58744336 | None:intergenic | 50.0% |
| !! | CTGCTCAGTCTCTTTTCAGG+TGG | + | chr1.1:58741701-58741720 | MS.gene74847:intron | 50.0% |
| AGCTTGTGTGTGGCAGTTCC+TGG | + | chr1.1:58742939-58742958 | MS.gene74847:intron | 55.0% | |
| AGTACACTGGCCAAGGCTGA+TGG | - | chr1.1:58743889-58743908 | None:intergenic | 55.0% | |
| ATCAGCCTTGGCCAGTGTAC+TGG | + | chr1.1:58743888-58743907 | MS.gene74847:CDS | 55.0% | |
| ATCGAAGGCAGAGAGACTGG+TGG | + | chr1.1:58744097-58744116 | MS.gene74847:CDS | 55.0% | |
| CACTCCCTCTTCCCTCTAAC+CGG | - | chr1.1:58741599-58741618 | None:intergenic | 55.0% | |
| CCATGCTGGAGTCTATGGTG+AGG | + | chr1.1:58742461-58742480 | MS.gene74847:intron | 55.0% | |
| CCTCACCATAGACTCCAGCA+TGG | - | chr1.1:58742464-58742483 | None:intergenic | 55.0% | |
| GACGTGCTTAACTCATGCCC+AGG | - | chr1.1:58742960-58742979 | None:intergenic | 55.0% | |
| GAGCTCGGGAGGAAAGTTCT+TGG | - | chr1.1:58743685-58743704 | None:intergenic | 55.0% | |
| GATGGTGCAACCTGTGATCC+AGG | + | chr1.1:58743938-58743957 | MS.gene74847:CDS | 55.0% | |
| GCTCAGAGGCCAAATGAGAG+AGG | + | chr1.1:58742177-58742196 | MS.gene74847:intron | 55.0% | |
| GCTGGAGTCTATGGTGAGGT+TGG | + | chr1.1:58742465-58742484 | MS.gene74847:intron | 55.0% | |
| GCTTGTGTGTGGCAGTTCCT+GGG | + | chr1.1:58742940-58742959 | MS.gene74847:intron | 55.0% | |
| GTACACTGGCCAAGGCTGAT+GGG | - | chr1.1:58743888-58743907 | None:intergenic | 55.0% | |
| TCCTCCCGAGCTCAAAGGTT+TGG | + | chr1.1:58743692-58743711 | MS.gene74847:CDS | 55.0% | |
| TCCTGCTTGAAGGGGAGCTT+TGG | - | chr1.1:58742596-58742615 | None:intergenic | 55.0% | |
| TCGATGCGTTCCTGGATCAC+AGG | - | chr1.1:58743951-58743970 | None:intergenic | 55.0% | |
| TGCATCGAAGGCAGAGAGAC+TGG | + | chr1.1:58744094-58744113 | MS.gene74847:CDS | 55.0% | |
| ! | GCACGTTCATCCTTTTCCCC+TGG | - | chr1.1:58743434-58743453 | None:intergenic | 55.0% |
| AAGGAGGGTCCCATCAGCCT+TGG | + | chr1.1:58743876-58743895 | MS.gene74847:CDS | 60.0% | |
| AGCCTTGGCCAGTGTACTGG+TGG | + | chr1.1:58743891-58743910 | MS.gene74847:CDS | 60.0% | |
| CAAATGGCGCCCAGGGGAAA+AGG | + | chr1.1:58743421-58743440 | MS.gene74847:CDS | 60.0% | |
| CACCTTGCCCACCAGTACAC+TGG | - | chr1.1:58743902-58743921 | None:intergenic | 60.0% | |
| GCAGCAGCTGTCTGCATCGA+AGG | + | chr1.1:58744082-58744101 | MS.gene74847:CDS | 60.0% | |
| GCCAAACCTTTGAGCTCGGG+AGG | - | chr1.1:58743696-58743715 | None:intergenic | 60.0% | |
| GCCAAAGCTCCCCTTCAAGC+AGG | + | chr1.1:58742592-58742611 | MS.gene74847:intron | 60.0% | |
| ! | GCCTTGGCCAGTGTACTGGT+GGG | + | chr1.1:58743892-58743911 | MS.gene74847:CDS | 60.0% |
| GCCCACCAGTACACTGGCCA+AGG | - | chr1.1:58743896-58743915 | None:intergenic | 65.0% | |
| ! | GGCCAGTGTACTGGTGGGCA+AGG | + | chr1.1:58743897-58743916 | MS.gene74847:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58740646 | 58744358 | 58740646 | ID=MS.gene74847 |
| chr1.1 | mRNA | 58740646 | 58744358 | 58740646 | ID=MS.gene74847.t1;Parent=MS.gene74847 |
| chr1.1 | exon | 58740646 | 58740676 | 58740646 | ID=MS.gene74847.t1.exon1;Parent=MS.gene74847.t1 |
| chr1.1 | CDS | 58740646 | 58740676 | 58740646 | ID=cds.MS.gene74847.t1;Parent=MS.gene74847.t1 |
| chr1.1 | exon | 58740775 | 58740821 | 58740775 | ID=MS.gene74847.t1.exon2;Parent=MS.gene74847.t1 |
| chr1.1 | CDS | 58740775 | 58740821 | 58740775 | ID=cds.MS.gene74847.t1;Parent=MS.gene74847.t1 |
| chr1.1 | exon | 58743239 | 58743285 | 58743239 | ID=MS.gene74847.t1.exon3;Parent=MS.gene74847.t1 |
| chr1.1 | CDS | 58743239 | 58743285 | 58743239 | ID=cds.MS.gene74847.t1;Parent=MS.gene74847.t1 |
| chr1.1 | exon | 58743394 | 58743496 | 58743394 | ID=MS.gene74847.t1.exon4;Parent=MS.gene74847.t1 |
| chr1.1 | CDS | 58743394 | 58743496 | 58743394 | ID=cds.MS.gene74847.t1;Parent=MS.gene74847.t1 |
| chr1.1 | exon | 58743582 | 58744358 | 58743582 | ID=MS.gene74847.t1.exon5;Parent=MS.gene74847.t1 |
| chr1.1 | CDS | 58743582 | 58744358 | 58743582 | ID=cds.MS.gene74847.t1;Parent=MS.gene74847.t1 |
| Gene Sequence |
| Protein sequence |
