Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62646.t1 | XP_003631011.1 | 98.2 | 965 | 17 | 0 | 1 | 965 | 1 | 965 | 0.00E+00 | 1687.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62646.t1 | O48844 | 83.7 | 970 | 148 | 4 | 1 | 964 | 1 | 966 | 0.0e+00 | 1478.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62646.t1 | G7LCC0 | 98.2 | 965 | 17 | 0 | 1 | 965 | 1 | 965 | 0.0e+00 | 1687.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57118 | MS.gene62646 | PPI |
| MS.gene62646 | MS.gene058594 | PPI |
| MS.gene62646 | MS.gene20187 | PPI |
| MS.gene048987 | MS.gene62646 | PPI |
| MS.gene62646 | MS.gene55853 | PPI |
| MS.gene06206 | MS.gene62646 | PPI |
| MS.gene95863 | MS.gene62646 | PPI |
| MS.gene62646 | MS.gene57118 | PPI |
| MS.gene62646 | MS.gene015610 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62646.t1 | MTR_8g106120 | 99.600 | 1001 | 4 | 0 | 1 | 1001 | 1 | 1001 | 0.0 | 2044 |
| MS.gene62646.t1 | MTR_2g067250 | 97.602 | 1001 | 22 | 1 | 1 | 1001 | 1 | 999 | 0.0 | 2006 |
| MS.gene62646.t1 | MTR_8g106120 | 99.743 | 779 | 2 | 0 | 223 | 1001 | 1 | 779 | 0.0 | 1589 |
| MS.gene62646.t1 | MTR_8g106120 | 99.723 | 721 | 2 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1479 |
| MS.gene62646.t1 | MTR_3g009940 | 77.037 | 270 | 15 | 2 | 1 | 270 | 1 | 223 | 3.11e-131 | 400 |
| MS.gene62646.t1 | MTR_3g009940 | 77.698 | 139 | 9 | 2 | 694 | 832 | 224 | 340 | 6.76e-62 | 215 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62646.t1 | AT2G32730 | 84.341 | 1009 | 145 | 9 | 1 | 1001 | 1 | 1004 | 0.0 | 1676 |
| MS.gene62646.t1 | AT1G04810 | 81.719 | 1012 | 162 | 8 | 1 | 1001 | 1 | 1000 | 0.0 | 1638 |
Find 269 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCCTGAGGGAAAATT+TGG | 0.159807 | 4.2:+924782 | MS.gene62646:CDS |
| TCCAGCCGTTGCACTGAATT+TGG | 0.186516 | 4.2:-924917 | None:intergenic |
| CATTATTGCATTGGCATAAA+TGG | 0.189798 | 4.2:-924739 | None:intergenic |
| GAGCAAGATGGGTGCAATTT+TGG | 0.199961 | 4.2:+926239 | MS.gene62646:CDS |
| CCAGTTAAGTTGGCACCTTC+AGG | 0.213525 | 4.2:+926986 | MS.gene62646:CDS |
| CATCTCCACAGACTGCTTTA+TGG | 0.226890 | 4.2:-924691 | None:intergenic |
| TTGTCAGTGTCTTATGTTCT+TGG | 0.227488 | 4.2:+924150 | MS.gene62646:CDS |
| GGTTGAGCAGAGCTACTAAT+TGG | 0.236302 | 4.2:+924893 | MS.gene62646:CDS |
| AAACAAAGATGATGCTCTTT+TGG | 0.252990 | 4.2:+924222 | MS.gene62646:CDS |
| GACTATGTCCATACTCTTCT+AGG | 0.285306 | 4.2:+923208 | MS.gene62646:CDS |
| GGCTCTGATTTCTTCTCTGT+TGG | 0.292922 | 4.2:-926872 | None:intergenic |
| TGGAGAGAGCGTGAATCTTC+AGG | 0.293532 | 4.2:-922108 | None:intergenic |
| GAGGGTACCAATACCAAAAT+TGG | 0.295987 | 4.2:-926365 | None:intergenic |
| GCTTTATGGTCTTCAAAATA+AGG | 0.300890 | 4.2:-924677 | None:intergenic |
| GGAATTGCTCTTACGGTTTA+CGG | 0.306338 | 4.2:+925520 | MS.gene62646:CDS |
| CCTGAAGGTGCCAACTTAAC+TGG | 0.312725 | 4.2:-926986 | None:intergenic |
| GAATCTGCATCACTGGGTTT+TGG | 0.319869 | 4.2:-924352 | None:intergenic |
| AGGACTGCGGTCCTAGCATT+AGG | 0.329300 | 4.2:+925715 | MS.gene62646:CDS |
| TAGTGAGGCCATATCTTTGC+TGG | 0.339539 | 4.2:+925990 | MS.gene62646:CDS |
| TACTTGCCTCAGGGTGGGAC+TGG | 0.339564 | 4.2:+924994 | MS.gene62646:CDS |
| TGAGAGGTTAAACAAAATAA+AGG | 0.344216 | 4.2:+924480 | MS.gene62646:CDS |
| TTTCTTACTAGCCCTGGCTT+TGG | 0.346140 | 4.2:-926580 | None:intergenic |
| ATGCCACCATAACGTAATAT+TGG | 0.348326 | 4.2:-925595 | None:intergenic |
| CCTGCTGCAAATGACCTCTA+TGG | 0.350310 | 4.2:-924951 | None:intergenic |
| GCTCTGATTTCTTCTCTGTT+GGG | 0.354056 | 4.2:-926871 | None:intergenic |
| TGAGCAGGAACCACTCTTGC+TGG | 0.358571 | 4.2:-926923 | None:intergenic |
| TGAGGCTGCTGGTATCAGTA+TGG | 0.362240 | 4.2:+925322 | MS.gene62646:CDS |
| GTGGGAACAGTCGTAGGCTT+GGG | 0.369188 | 4.2:-926504 | None:intergenic |
| ATATGCTAGTTTCAAGTCTA+AGG | 0.370644 | 4.2:+923446 | MS.gene62646:CDS |
| AGTCTTAGAAAGTAGTCTTA+TGG | 0.371639 | 4.2:-926298 | None:intergenic |
| CTCAGCTTTCTTACTAGCCC+TGG | 0.372570 | 4.2:-926586 | None:intergenic |
| AGAGCACCACCTTCTGAGTA+TGG | 0.376878 | 4.2:-925027 | None:intergenic |
| TCCGCCAGCATCAAGGATTC+CGG | 0.379806 | 4.2:-926265 | None:intergenic |
| CGTGTATTCCAGGCGACAAT+TGG | 0.383184 | 4.2:+926182 | MS.gene62646:intron |
| GGAAACAGTCTCACTTGTTA+TGG | 0.391974 | 4.2:-924555 | None:intergenic |
| CAAAGGCTCCAGCAAAGATA+TGG | 0.396501 | 4.2:-925998 | None:intergenic |
| TTTGCTGGAGCCTTTGACTT+CGG | 0.397652 | 4.2:+926005 | MS.gene62646:CDS |
| TGACAAATGCTCAGATAATC+TGG | 0.399990 | 4.2:-924133 | None:intergenic |
| TCCACAATTGCTTCCAGTCT+AGG | 0.406822 | 4.2:-923495 | None:intergenic |
| ATTCGCGTGTTGGAACCTTC+AGG | 0.407002 | 4.2:+926103 | MS.gene62646:CDS |
| GGCATTTCCTGTGCGGGTAC+AGG | 0.408036 | 4.2:+925964 | MS.gene62646:CDS |
| AATTCTCACCTAGAAGAGTA+TGG | 0.416307 | 4.2:-923216 | None:intergenic |
| TAGCGGAACAGCAAACAATA+AGG | 0.416651 | 4.2:+925639 | MS.gene62646:CDS |
| GGACTGCGGTCCTAGCATTA+GGG | 0.417017 | 4.2:+925716 | MS.gene62646:CDS |
| GCCTCCGGAATCCTTGATGC+TGG | 0.420374 | 4.2:+926261 | MS.gene62646:CDS |
| CTGAGTAGAATCTGCATCAC+TGG | 0.422471 | 4.2:-924359 | None:intergenic |
| CCTCAGGGTGGGACTGGTGG+TGG | 0.423831 | 4.2:+925000 | MS.gene62646:CDS |
| AGCAAGAGTGGTTCCTGCTC+AGG | 0.424076 | 4.2:+926925 | MS.gene62646:CDS |
| TTCAGTGCAACGGCTGGACT+TGG | 0.424201 | 4.2:+924922 | MS.gene62646:CDS |
| CAGTTAAGTTGGCACCTTCA+GGG | 0.424877 | 4.2:+926987 | MS.gene62646:CDS |
| TCAGTAATAGCAAGAACTTC+AGG | 0.425883 | 4.2:-927043 | None:intergenic |
| CTATCCTATGCCCTTGGAGC+TGG | 0.426899 | 4.2:+923157 | MS.gene62646:CDS |
| AATCCTGTGAAACATCAAAC+AGG | 0.428256 | 4.2:-923183 | None:intergenic |
| TCTTATCTATTTCATAAGCT+TGG | 0.430502 | 4.2:+926386 | MS.gene62646:CDS |
| ACATCAACTGCTGGCGGGTC+AGG | 0.431417 | 4.2:+927082 | MS.gene62646:CDS |
| GGCCTACTCATGGTTGGAAC+AGG | 0.433364 | 4.2:+925344 | MS.gene62646:CDS |
| AGAGGGAGTTGCAAGCATAT+TGG | 0.434576 | 4.2:+924180 | MS.gene62646:CDS |
| TCCCCTGTTTGATGTTTCAC+AGG | 0.436490 | 4.2:+923180 | MS.gene62646:CDS |
| TGCCATTGAATGCAGGAGAT+TGG | 0.436671 | 4.2:+923664 | MS.gene62646:CDS |
| GCTGGTTCCCCGTCCGTCAT+TGG | 0.437439 | 4.2:-924412 | None:intergenic |
| GACTCTAAAGGTTGAGACTT+TGG | 0.437729 | 4.2:-924322 | None:intergenic |
| CAGATATGTTCCAGTTAAGT+TGG | 0.438153 | 4.2:+926976 | MS.gene62646:CDS |
| ACAATCTGGTCGATAGCTTC+TGG | 0.438425 | 4.2:+922137 | MS.gene62646:CDS |
| AATATGCTTGCAACTCCCTC+TGG | 0.439832 | 4.2:-924178 | None:intergenic |
| GGTGGGAACAGTCGTAGGCT+TGG | 0.440669 | 4.2:-926505 | None:intergenic |
| ATCCAATCTCCTGCATTCAA+TGG | 0.441331 | 4.2:-923666 | None:intergenic |
| TCCGTCATTGGAACATCATC+TGG | 0.441477 | 4.2:-924400 | None:intergenic |
| GATTAAAGCCGTTGGTGAAA+AGG | 0.442049 | 4.2:-926409 | None:intergenic |
| ATCAGCAATGGCTGTGGATG+AGG | 0.444703 | 4.2:+927126 | MS.gene62646:CDS |
| GATGGCGCCCTACTTGCCTC+AGG | 0.446713 | 4.2:+924984 | MS.gene62646:CDS |
| TGGAAAATACCAACAAGCTA+TGG | 0.449129 | 4.2:+923637 | MS.gene62646:CDS |
| TACACTGATAGTGCTGTTGC+CGG | 0.449237 | 4.2:+925299 | MS.gene62646:CDS |
| GGAACACTTGTGGAGATCTC+TGG | 0.452349 | 4.2:-922160 | None:intergenic |
| TGAGACAAGAACTCAAACTT+TGG | 0.455764 | 4.2:-926456 | None:intergenic |
| CATGGTGCATGTCTAGGTCT+TGG | 0.456191 | 4.2:+925218 | MS.gene62646:CDS |
| TTTGTTAGAATCTCAAAAGT+AGG | 0.456278 | 4.2:-926899 | None:intergenic |
| TTGCCTCAGGGTGGGACTGG+TGG | 0.456946 | 4.2:+924997 | MS.gene62646:CDS |
| CTCACTTGTTATGGCTGTAA+AGG | 0.458815 | 4.2:-924546 | None:intergenic |
| GCCAAATTCAGTGCAACGGC+TGG | 0.460539 | 4.2:+924916 | MS.gene62646:CDS |
| GATGAAGAACTCTGCAATCC+TGG | 0.462319 | 4.2:-927106 | None:intergenic |
| AGCTCTGGGAATTGCTCTTA+CGG | 0.463949 | 4.2:+925513 | MS.gene62646:CDS |
| GAGAGGTTAAACAAAATAAA+GGG | 0.463995 | 4.2:+924481 | MS.gene62646:CDS |
| TCTCTCCAACCTCAACAATC+TGG | 0.466462 | 4.2:+922123 | MS.gene62646:CDS |
| CCATAGAGGTCATTTGCAGC+AGG | 0.467827 | 4.2:+924951 | MS.gene62646:CDS |
| AGGACAGAACTAACCTGCTC+TGG | 0.470545 | 4.2:-925757 | None:intergenic |
| CCCTAGACTGGAAGCAATTG+TGG | 0.471366 | 4.2:+923494 | MS.gene62646:CDS |
| TTAATGAACTTCTCCTGAGC+AGG | 0.471986 | 4.2:-926938 | None:intergenic |
| TCCAGCATGCATTATTGCAT+TGG | 0.472646 | 4.2:-924748 | None:intergenic |
| CCACAATTGCTTCCAGTCTA+GGG | 0.473984 | 4.2:-923494 | None:intergenic |
| GCTGTTGCCGGTGAGGCTGC+TGG | 0.476468 | 4.2:+925311 | MS.gene62646:CDS |
| AAGCTTATGAAATAGATAAG+AGG | 0.477531 | 4.2:-926384 | None:intergenic |
| GGCTTCTCCATCCTTCTCAC+TGG | 0.480813 | 4.2:-926685 | None:intergenic |
| CATTTCTTCCGCCAGCATCA+AGG | 0.480834 | 4.2:-926272 | None:intergenic |
| CTCTGATTTCTTCTCTGTTG+GGG | 0.482784 | 4.2:-926870 | None:intergenic |
| TGACCATAGCCATTGCTATG+AGG | 0.488921 | 4.2:-926056 | None:intergenic |
| GGAGAGAGCGTGAATCTTCA+GGG | 0.489567 | 4.2:-922107 | None:intergenic |
| TGGCAGTTCCCATAGCTTGT+TGG | 0.489815 | 4.2:-923646 | None:intergenic |
| GACTCACTATCCTATGCCCT+TGG | 0.491337 | 4.2:+923151 | MS.gene62646:CDS |
| TGAGCAGATGACTCGAGATC+AGG | 0.492635 | 4.2:+925570 | MS.gene62646:CDS |
| TGGCATGTATGCACTGGCTT+TGG | 0.492933 | 4.2:+925612 | MS.gene62646:CDS |
| TCTACATCAGCTCCAAGTGC+TGG | 0.494421 | 4.2:+926648 | MS.gene62646:CDS |
| CAGGATCCAATATTACGTTA+TGG | 0.496766 | 4.2:+925589 | MS.gene62646:CDS |
| ATGTTTCAGAGGGTTAGCTC+TGG | 0.498173 | 4.2:+925498 | MS.gene62646:intron |
| GTCCCACCCTGAGGCAAGTA+GGG | 0.504577 | 4.2:-924991 | None:intergenic |
| CATCAGCTAAGGCCAAAGCC+AGG | 0.505060 | 4.2:+926568 | MS.gene62646:CDS |
| ACGACGTTGGTCAGCTCAGC+CGG | 0.507655 | 4.2:+922049 | MS.gene62646:CDS |
| CAGCTCAGCCGGTGGCATGT+TGG | 0.508274 | 4.2:+922060 | MS.gene62646:CDS |
| GCAGTTGATGTCGTAGATGC+AGG | 0.509373 | 4.2:-927070 | None:intergenic |
| TCAGCTCCAAGTGCTGGAAA+AGG | 0.509472 | 4.2:+926654 | MS.gene62646:CDS |
| CTTGGAGCTGATGTAGAGTC+AGG | 0.509922 | 4.2:-926642 | None:intergenic |
| TAAGAAAGCTGAGGAACAGA+AGG | 0.510396 | 4.2:+926596 | MS.gene62646:CDS |
| TTTGGCTCTACGGACTCTAA+AGG | 0.511037 | 4.2:-924334 | None:intergenic |
| GTTGAGCAGAGCTACTAATT+GGG | 0.514161 | 4.2:+924894 | MS.gene62646:CDS |
| GTTGAGACTTTGGCAATGAA+AGG | 0.514680 | 4.2:-924312 | None:intergenic |
| GACCATAGCCATTGCTATGA+GGG | 0.517067 | 4.2:-926055 | None:intergenic |
| ATCGACCAGATTGTTGAGGT+TGG | 0.517100 | 4.2:-922128 | None:intergenic |
| ATGATGTTCCAATGACGGAC+GGG | 0.518455 | 4.2:+924404 | MS.gene62646:CDS |
| TTTGATGCCCTCTCCATGGT+TGG | 0.520103 | 4.2:-925073 | None:intergenic |
| TACAATCCACATGTTCGTTA+CGG | 0.520609 | 4.2:+925925 | MS.gene62646:CDS |
| CTGATGTGAGTGATGATGTC+AGG | 0.520902 | 4.2:+925692 | MS.gene62646:CDS |
| TATCAAAGTAGACCCTAGAC+TGG | 0.521922 | 4.2:+923482 | MS.gene62646:CDS |
| GTGGATTGTATGATTCTGAT+AGG | 0.523060 | 4.2:-925912 | None:intergenic |
| TTCTTCATCAGCAATGGCTG+TGG | 0.523176 | 4.2:+927120 | MS.gene62646:CDS |
| GGTGGTGCTCTTTATGCCCT+CGG | 0.523440 | 4.2:+925039 | MS.gene62646:CDS |
| TAGAATCTCAAAAGTAGGCT+CGG | 0.523778 | 4.2:-926894 | None:intergenic |
| CGCCCTACTTGCCTCAGGGT+GGG | 0.525021 | 4.2:+924989 | MS.gene62646:CDS |
| GCTGTGGGCATTTCCTGTGC+GGG | 0.525424 | 4.2:+925958 | MS.gene62646:CDS |
| GGTTGGAACAGGCAGTGATA+AGG | 0.525506 | 4.2:+925355 | MS.gene62646:CDS |
| ACTGCTGGCGGGTCAGGACC+AGG | 0.525643 | 4.2:+927088 | MS.gene62646:CDS |
| CAGCATGGCCAACATGCCAC+CGG | 0.526548 | 4.2:-922068 | None:intergenic |
| GAGGATACCATGAGCAAGAT+GGG | 0.527104 | 4.2:+926228 | MS.gene62646:CDS |
| TTCAGTCATGGCTACGACGT+TGG | 0.527304 | 4.2:+922036 | None:intergenic |
| GAAGCTAGTGATTCGCGTGT+TGG | 0.527917 | 4.2:+926093 | MS.gene62646:CDS |
| AGTCCCACCCTGAGGCAAGT+AGG | 0.529432 | 4.2:-924992 | None:intergenic |
| CAATTCAGGTGTATTGTGGA+TGG | 0.530057 | 4.2:+923617 | MS.gene62646:intron |
| ATTCAACATGGTGCATGTCT+AGG | 0.530327 | 4.2:+925212 | MS.gene62646:CDS |
| TCTTCAATTCAGGTGTATTG+TGG | 0.532154 | 4.2:+923613 | MS.gene62646:intron |
| AGAATCTCAAAAGTAGGCTC+GGG | 0.532463 | 4.2:-926893 | None:intergenic |
| TGACATTTAGAAGAAAAGCT+TGG | 0.532851 | 4.2:-924282 | None:intergenic |
| TGCCGCATTACTTGTATCAA+AGG | 0.534132 | 4.2:+922800 | MS.gene62646:CDS |
| TCGTGCTGCGCAAGCTATCA+CGG | 0.534450 | 4.2:-925104 | None:intergenic |
| CATAGCAATGGCTATGGTCA+TGG | 0.535078 | 4.2:+926059 | MS.gene62646:CDS |
| AGGAGTTTGATCAGCATCAA+AGG | 0.536478 | 4.2:+922772 | MS.gene62646:CDS |
| GATGTTGACAAAACAGCAGT+TGG | 0.538017 | 4.2:-926549 | None:intergenic |
| CGTGAATCTTCAGGGAGATG+TGG | 0.540725 | 4.2:-922099 | None:intergenic |
| GGAAAATACCAACAAGCTAT+GGG | 0.540976 | 4.2:+923638 | MS.gene62646:CDS |
| TCGAATGGTTGAGGAGGTTG+AGG | 0.541370 | 4.2:-927151 | None:intergenic |
| TATCAGTATGGGCCTACTCA+TGG | 0.541724 | 4.2:+925334 | MS.gene62646:CDS |
| TGTTTCAGAGGGTTAGCTCT+GGG | 0.542560 | 4.2:+925499 | MS.gene62646:intron |
| GGCACATTGACAGCAGAAGC+TGG | 0.542844 | 4.2:-924430 | None:intergenic |
| CTTGCGCAGCACGACTGTTG+AGG | 0.543633 | 4.2:+925113 | MS.gene62646:CDS |
| TTACGGAGCAGCTCTTGCTG+TGG | 0.543767 | 4.2:+925942 | MS.gene62646:CDS |
| GAGGCTGCTGGTATCAGTAT+GGG | 0.546660 | 4.2:+925323 | MS.gene62646:CDS |
| TGAGGATACCATGAGCAAGA+TGG | 0.547720 | 4.2:+926227 | MS.gene62646:CDS |
| TGGGAACTGCCATTGAATGC+AGG | 0.550560 | 4.2:+923657 | MS.gene62646:CDS |
| ACTAAGACCTGTACCCGCAC+AGG | 0.553691 | 4.2:-925971 | None:intergenic |
| GCCAATGCAATAATGCATGC+TGG | 0.554004 | 4.2:+924747 | MS.gene62646:CDS |
| TACGGAGCAGCTCTTGCTGT+GGG | 0.554446 | 4.2:+925943 | MS.gene62646:CDS |
| GAAATACTTTAACAAGGAGA+CGG | 0.555096 | 4.2:-924096 | None:intergenic |
| GGGACCAGCTCCAAGGGCAT+AGG | 0.559805 | 4.2:-923161 | None:intergenic |
| TGCTGTGGGCATTTCCTGTG+CGG | 0.561269 | 4.2:+925957 | MS.gene62646:CDS |
| ACTCAGAATGCTGGTGTGAG+TGG | 0.561477 | 4.2:+924376 | MS.gene62646:CDS |
| AGGAAAGTCTTCCAGTGAGA+AGG | 0.561790 | 4.2:+926674 | MS.gene62646:CDS |
| AAGTCTTCCAGTGAGAAGGA+TGG | 0.561796 | 4.2:+926678 | MS.gene62646:CDS |
| TTCCCTCAGGAAAGTATCCA+CGG | 0.561912 | 4.2:-924775 | None:intergenic |
| GCAGAGTTCTTCATCAGCAA+TGG | 0.561955 | 4.2:+927114 | MS.gene62646:CDS |
| ATCTCTAGGAACTGCTGATG+AGG | 0.563533 | 4.2:+925247 | MS.gene62646:CDS |
| TGCCCTCATAGCAATGGCTA+TGG | 0.563797 | 4.2:+926053 | MS.gene62646:CDS |
| GAGGTCATTTGCAGCAGGGA+AGG | 0.563886 | 4.2:+924956 | MS.gene62646:CDS |
| TGAGAGTTTGTACGAAGATG+AGG | 0.564498 | 4.2:+922752 | MS.gene62646:CDS |
| GAAGGATGGAGAAGCCATGC+AGG | 0.566051 | 4.2:+926692 | MS.gene62646:CDS |
| CTACGACATCAACTGCTGGC+GGG | 0.566474 | 4.2:+927077 | MS.gene62646:CDS |
| ATTGTTTGATGCCCTCTCCA+TGG | 0.568153 | 4.2:-925077 | None:intergenic |
| TTCTGCTGTCAATGTGCCTG+AGG | 0.568847 | 4.2:+924435 | MS.gene62646:CDS |
| GCAAGAACTTCAGGCTCAGT+AGG | 0.571786 | 4.2:-927034 | None:intergenic |
| ATACATAAGGGGAACACTTG+TGG | 0.572276 | 4.2:-922170 | None:intergenic |
| AAACAGGGGACCAGCTCCAA+GGG | 0.572325 | 4.2:-923167 | None:intergenic |
| ATTGTATGATTCTGATAGGA+GGG | 0.573007 | 4.2:-925908 | None:intergenic |
| ACTTAAGATGTGTACTCGAA+TGG | 0.573319 | 4.2:-927166 | None:intergenic |
| TTTCACTGTTGAAGTAGTGG+TGG | 0.574051 | 4.2:-926523 | None:intergenic |
| GCATCTACGACATCAACTGC+TGG | 0.574200 | 4.2:+927073 | MS.gene62646:CDS |
| ACTGATACCAGCAGCCTCAC+CGG | 0.575307 | 4.2:-925318 | None:intergenic |
| GGTCTTGGATTGGCATCTCT+AGG | 0.577061 | 4.2:+925233 | MS.gene62646:CDS |
| TTCAGACCGATTAAAGCCGT+TGG | 0.577561 | 4.2:-926417 | None:intergenic |
| GGACTTGGTGTTATCCATAG+AGG | 0.578245 | 4.2:+924937 | MS.gene62646:CDS |
| GCGCCCTACTTGCCTCAGGG+TGG | 0.578270 | 4.2:+924988 | MS.gene62646:CDS |
| TCCGGAATCCTTGATGCTGG+CGG | 0.580078 | 4.2:+926264 | MS.gene62646:CDS |
| ATGGCGCCCTACTTGCCTCA+GGG | 0.581130 | 4.2:+924985 | MS.gene62646:CDS |
| TCTAACAAATCCAGCAAGAG+TGG | 0.582580 | 4.2:+926913 | MS.gene62646:CDS |
| GCTGTACTCTGATCCAGAGC+AGG | 0.584183 | 4.2:+925744 | MS.gene62646:CDS |
| ATTCATGCCAACCATGGAGA+GGG | 0.584575 | 4.2:+925066 | MS.gene62646:CDS |
| AATTGCACCCATCTTGCTCA+TGG | 0.584856 | 4.2:-926235 | None:intergenic |
| TTCACTGTTGAAGTAGTGGT+GGG | 0.585150 | 4.2:-926522 | None:intergenic |
| TGGGAACAGTCGTAGGCTTG+GGG | 0.585173 | 4.2:-926503 | None:intergenic |
| GATAAAGTTACTGCAGTGGT+TGG | 0.586930 | 4.2:+926327 | MS.gene62646:CDS |
| GTGAATCTTCAGGGAGATGT+GGG | 0.588767 | 4.2:-922098 | None:intergenic |
| AGTATGGGCCTACTCATGGT+TGG | 0.589770 | 4.2:+925338 | MS.gene62646:CDS |
| TGAGTAGAATCTGCATCACT+GGG | 0.589801 | 4.2:-924358 | None:intergenic |
| AAGTTTCACTGTTGAAGTAG+TGG | 0.590303 | 4.2:-926526 | None:intergenic |
| GATGTGTACTCGAATGGTTG+AGG | 0.593404 | 4.2:-927160 | None:intergenic |
| ATGCTCAGATAATCTGGTGA+AGG | 0.593508 | 4.2:-924127 | None:intergenic |
| AGCTTATGAAATAGATAAGA+GGG | 0.594563 | 4.2:-926383 | None:intergenic |
| CAGGAGATTGGATAAACTTG+AGG | 0.594774 | 4.2:+923676 | MS.gene62646:CDS |
| TCAACAACATCCGAAGTCAA+AGG | 0.594848 | 4.2:-926015 | None:intergenic |
| TGGTATCCTCATGCTTGTCA+AGG | 0.595965 | 4.2:-926215 | None:intergenic |
| CATAGAGGTCATTTGCAGCA+GGG | 0.597007 | 4.2:+924952 | MS.gene62646:CDS |
| ATCAGCTAAGGCCAAAGCCA+GGG | 0.602026 | 4.2:+926569 | MS.gene62646:CDS |
| GGTCTTCAAAATAAGGAGGT+CGG | 0.604928 | 4.2:-924670 | None:intergenic |
| ACAGCACAAACCCTAATGCT+AGG | 0.605035 | 4.2:-925726 | None:intergenic |
| TGCATGTCTAGGTCTTGGAT+TGG | 0.605817 | 4.2:+925223 | MS.gene62646:CDS |
| AAAGTGAAGTAATTGACGAA+TGG | 0.609715 | 4.2:-925662 | None:intergenic |
| GCAGATTCTACTCAGAATGC+TGG | 0.609773 | 4.2:+924367 | MS.gene62646:CDS |
| CAGGGCTAGTAAGAAAGCTG+AGG | 0.614232 | 4.2:+926587 | MS.gene62646:CDS |
| CAAACAGGGGACCAGCTCCA+AGG | 0.614560 | 4.2:-923168 | None:intergenic |
| TGATGTTCCAATGACGGACG+GGG | 0.615778 | 4.2:+924405 | MS.gene62646:CDS |
| AGCTATCGACCAGATTGTTG+AGG | 0.617954 | 4.2:-922132 | None:intergenic |
| TTAAGAAGCACAAACCCTGA+AGG | 0.618792 | 4.2:-927001 | None:intergenic |
| TGATAGTGCTGTTGCCGGTG+AGG | 0.619271 | 4.2:+925304 | MS.gene62646:CDS |
| GAAGACCATAAAGCAGTCTG+TGG | 0.620130 | 4.2:+924686 | MS.gene62646:CDS |
| ACCAGATGATGTTCCAATGA+CGG | 0.620385 | 4.2:+924399 | MS.gene62646:CDS |
| GCAGCAGGGAAGGTCACTGA+TGG | 0.621007 | 4.2:+924966 | MS.gene62646:CDS |
| TCAGGGTGCCCTCATAGCAA+TGG | 0.622547 | 4.2:+926047 | MS.gene62646:CDS |
| TTGGGCCAAATTCAGTGCAA+CGG | 0.622608 | 4.2:+924912 | MS.gene62646:CDS |
| GGTGGTAGTCCATACTCAGA+AGG | 0.623238 | 4.2:+925018 | MS.gene62646:CDS |
| TATGTTCTTGGATGAGCCAG+AGG | 0.626390 | 4.2:+924162 | MS.gene62646:CDS |
| GATCCAATATTACGTTATGG+TGG | 0.627085 | 4.2:+925592 | MS.gene62646:CDS |
| TCTACGACATCAACTGCTGG+CGG | 0.628294 | 4.2:+927076 | MS.gene62646:CDS |
| GGTCTGATTCATGCCAACCA+TGG | 0.628696 | 4.2:+925060 | MS.gene62646:CDS |
| GATAGGAGGGAAACAATTCG+AGG | 0.629557 | 4.2:-925895 | None:intergenic |
| GATGATGTTCCAATGACGGA+CGG | 0.631033 | 4.2:+924403 | MS.gene62646:CDS |
| TATGGCCAGGTCATTCAACA+TGG | 0.632302 | 4.2:+925200 | MS.gene62646:intron |
| GATGTGGGACTCGTGCAGCA+TGG | 0.634411 | 4.2:-922083 | None:intergenic |
| GGTTTACGGAAGAGAAGAAG+AGG | 0.635138 | 4.2:+925534 | MS.gene62646:CDS |
| AACCGTGGATACTTTCCTGA+GGG | 0.636227 | 4.2:+924773 | MS.gene62646:CDS |
| AGAGTGATTACATACATAAG+GGG | 0.636567 | 4.2:-922181 | None:intergenic |
| ACAAGAAGTGACAATGTGCA+AGG | 0.637151 | 4.2:+923707 | MS.gene62646:CDS |
| GATTCATGCCAACCATGGAG+AGG | 0.637281 | 4.2:+925065 | MS.gene62646:CDS |
| TTATGGTCTTCAAAATAAGG+AGG | 0.637784 | 4.2:-924674 | None:intergenic |
| ATGTTCTTGGATGAGCCAGA+GGG | 0.637862 | 4.2:+924163 | MS.gene62646:CDS |
| GTAGTGGTGGGAACAGTCGT+AGG | 0.638941 | 4.2:-926510 | None:intergenic |
| GCATGATAAAGTTACTGCAG+TGG | 0.640321 | 4.2:+926323 | MS.gene62646:CDS |
| GTTGGCATGAATCAGACCGA+GGG | 0.641472 | 4.2:-925055 | None:intergenic |
| TTATGGTGGCATGTATGCAC+TGG | 0.648795 | 4.2:+925606 | MS.gene62646:CDS |
| GCCAGCATCAAGGATTCCGG+AGG | 0.649554 | 4.2:-926262 | None:intergenic |
| GAATCTTAGAGAATACAGAC+AGG | 0.652688 | 4.2:+923769 | MS.gene62646:CDS |
| GCTGCTCCGTAACGAACATG+TGG | 0.655887 | 4.2:-925931 | None:intergenic |
| ATCCTGTGAAACATCAAACA+GGG | 0.656841 | 4.2:-923182 | None:intergenic |
| GGTAGTCCATACTCAGAAGG+TGG | 0.657262 | 4.2:+925021 | MS.gene62646:CDS |
| AATTATCCTTGACAAGCATG+AGG | 0.660003 | 4.2:+926209 | MS.gene62646:CDS |
| GATTGTATGATTCTGATAGG+AGG | 0.661847 | 4.2:-925909 | None:intergenic |
| TGCCTGTTCCAACCATGAGT+AGG | 0.663707 | 4.2:-925346 | None:intergenic |
| TGCGGGTACAGGTCTTAGTG+AGG | 0.666367 | 4.2:+925975 | MS.gene62646:CDS |
| GCACTGGCTTTGGCGTATAG+CGG | 0.666930 | 4.2:+925622 | MS.gene62646:CDS |
| TAATGTATGCATTACCTGCA+TGG | 0.667865 | 4.2:-926706 | None:intergenic |
| AATGCATGCTGGAACAACCG+TGG | 0.668717 | 4.2:+924758 | MS.gene62646:CDS |
| TACCTTTGATACAAGTAATG+CGG | 0.671026 | 4.2:-922802 | None:intergenic |
| ACGTTGGTCAGCTCAGCCGG+TGG | 0.681112 | 4.2:+922052 | MS.gene62646:CDS |
| GGTTGGCATGAATCAGACCG+AGG | 0.688601 | 4.2:-925056 | None:intergenic |
| TCTTAGAGAATACAGACAGG+AGG | 0.696091 | 4.2:+923772 | MS.gene62646:CDS |
| TTACGGAAGAGAAGAAGAGG+CGG | 0.701441 | 4.2:+925537 | MS.gene62646:CDS |
| CAACCGTGGATACTTTCCTG+AGG | 0.701995 | 4.2:+924772 | MS.gene62646:CDS |
| CCACCACCAGTCCCACCCTG+AGG | 0.702255 | 4.2:-925000 | None:intergenic |
| GTGTACTCGAATGGTTGAGG+AGG | 0.711248 | 4.2:-927157 | None:intergenic |
| TCCTGTGAAACATCAAACAG+GGG | 0.711450 | 4.2:-923181 | None:intergenic |
| TGCTGCGCAAGCTATCACGG+AGG | 0.731636 | 4.2:-925101 | None:intergenic |
| ATGTGAGTGATGATGTCAGG+AGG | 0.740753 | 4.2:+925695 | MS.gene62646:CDS |
| GTATTCTCTAAGATTCACAA+AGG | 0.747713 | 4.2:-923762 | None:intergenic |
| TGATGATGTCAGGAGGACTG+CGG | 0.772419 | 4.2:+925702 | MS.gene62646:CDS |
| TGGCATAAATGGTAGCACTG+TGG | 0.777224 | 4.2:-924728 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATCATAAAAATTTCAA+TGG | - | chr4.2:923905-923924 | None:intergenic | 10.0% |
| !! | CATCTAAGAATAATAATATA+TGG | - | chr4.2:923043-923062 | None:intergenic | 15.0% |
| !!! | TTATAAAGAATTTTTAACAG+CGG | + | chr4.2:924024-924043 | MS.gene62646:intron | 15.0% |
| !!! | TTTTGTTCCTTTAAAATTTT+AGG | + | chr4.2:924867-924886 | MS.gene62646:intron | 15.0% |
| !! | AATGAAAAGTCTTAATGATT+TGG | - | chr4.2:922599-922618 | None:intergenic | 20.0% |
| !! | ACGAAAAAATTATAAGGTAA+AGG | + | chr4.2:925414-925433 | MS.gene62646:intron | 20.0% |
| !! | AGAGGAAATATAAAAAGAAA+AGG | - | chr4.2:925780-925799 | None:intergenic | 20.0% |
| !! | ATATTATTATTCTTAGATGC+TGG | + | chr4.2:923044-923063 | MS.gene62646:intron | 20.0% |
| !! | TAAAATTAAAGGGATGAAAA+GGG | - | chr4.2:923866-923885 | None:intergenic | 20.0% |
| !! | TAATAAAAGACCTAAGATAA+AGG | - | chr4.2:923115-923134 | None:intergenic | 20.0% |
| !! | TTAGATCATCATTTATTTGT+TGG | + | chr4.2:924594-924613 | MS.gene62646:intron | 20.0% |
| !!! | AACCAATCCTAAAATTTTAA+AGG | - | chr4.2:924877-924896 | None:intergenic | 20.0% |
| !!! | AGATAACAAATAAGTATTGT+CGG | + | chr4.2:922951-922970 | MS.gene62646:intron | 20.0% |
| !!! | CCTTTAAAACAATAAAGTTT+CGG | - | chr4.2:926844-926863 | None:intergenic | 20.0% |
| !!! | GTTTTTTAGTGTTAATTTGT+TGG | + | chr4.2:922673-922692 | MS.gene62646:intron | 20.0% |
| !!! | TAAGATTTTATAAATTGTCG+TGG | - | chr4.2:923401-923420 | None:intergenic | 20.0% |
| !!! | TATATCTAATGTGTTGTTTA+TGG | + | chr4.2:925182-925201 | MS.gene62646:intron | 20.0% |
| !!! | TTCCTTTAAAATTTTAGGAT+TGG | + | chr4.2:924872-924891 | MS.gene62646:intron | 20.0% |
| ! | AAAGAGTGATTACATACATA+AGG | - | chr4.2:922186-922205 | None:intergenic | 25.0% |
| ! | AAGAGTGATTACATACATAA+GGG | - | chr4.2:922185-922204 | None:intergenic | 25.0% |
| ! | AAGCTTATGAAATAGATAAG+AGG | - | chr4.2:926387-926406 | None:intergenic | 25.0% |
| ! | AGCCACACAAAAAAAAAAAA+GGG | - | chr4.2:925817-925836 | None:intergenic | 25.0% |
| ! | AGCTCAATGACTAAAATTAA+AGG | - | chr4.2:923877-923896 | None:intergenic | 25.0% |
| ! | AGCTTATGAAATAGATAAGA+GGG | - | chr4.2:926386-926405 | None:intergenic | 25.0% |
| ! | CACAACACGAAAAAATTATA+AGG | + | chr4.2:925408-925427 | MS.gene62646:CDS | 25.0% |
| ! | CTAAAATTAAAGGGATGAAA+AGG | - | chr4.2:923867-923886 | None:intergenic | 25.0% |
| ! | GAGAGGTTAAACAAAATAAA+GGG | + | chr4.2:924481-924500 | MS.gene62646:CDS | 25.0% |
| ! | GCTCAATGACTAAAATTAAA+GGG | - | chr4.2:923876-923895 | None:intergenic | 25.0% |
| ! | TACTATGATCTCTATGAAAA+TGG | + | chr4.2:923292-923311 | MS.gene62646:intron | 25.0% |
| ! | TATCATGTTTCTTTCTTACT+TGG | + | chr4.2:922642-922661 | MS.gene62646:intron | 25.0% |
| ! | TCTTATCTATTTCATAAGCT+TGG | + | chr4.2:926386-926405 | MS.gene62646:CDS | 25.0% |
| ! | TGAGAGGTTAAACAAAATAA+AGG | + | chr4.2:924480-924499 | MS.gene62646:CDS | 25.0% |
| ! | TGATATCAACAAGTGAAAAA+AGG | - | chr4.2:922627-922646 | None:intergenic | 25.0% |
| ! | TTTGAAAGCTTCTGAATTAA+GGG | + | chr4.2:922565-922584 | MS.gene62646:intron | 25.0% |
| ! | TTTGTTAGAATCTCAAAAGT+AGG | - | chr4.2:926902-926921 | None:intergenic | 25.0% |
| !! | AAAATAAAGGGAATTTTGTC+TGG | + | chr4.2:924493-924512 | MS.gene62646:CDS | 25.0% |
| !! | AAATCTTATGTTTTCAGCTA+AGG | + | chr4.2:923413-923432 | MS.gene62646:intron | 25.0% |
| !! | ATCATTTATTTGTTGGTACT+TGG | + | chr4.2:924601-924620 | MS.gene62646:intron | 25.0% |
| !! | ATCTTAGGTCTTTTATTACT+TGG | + | chr4.2:923117-923136 | MS.gene62646:intron | 25.0% |
| !! | CATCTTTTAAACATCTCTTT+TGG | + | chr4.2:923927-923946 | MS.gene62646:intron | 25.0% |
| !! | GAAGTTCATTAAATTTTTGC+AGG | + | chr4.2:926949-926968 | MS.gene62646:CDS | 25.0% |
| !! | GGTAAGGAAAGTATATTATT+TGG | + | chr4.2:926124-926143 | MS.gene62646:intron | 25.0% |
| !! | TCTTAGGTCTTTTATTACTT+GGG | + | chr4.2:923118-923137 | MS.gene62646:intron | 25.0% |
| !!! | ACTTCAAATAGCTTTTGATT+TGG | + | chr4.2:924246-924265 | MS.gene62646:CDS | 25.0% |
| !!! | ATTGATAATATTGGTTCAGT+TGG | + | chr4.2:923320-923339 | MS.gene62646:intron | 25.0% |
| !!! | ATTGTTTCTAAATGTTTCAG+AGG | + | chr4.2:925487-925506 | MS.gene62646:intron | 25.0% |
| !!! | CCGAAACTTTATTGTTTTAA+AGG | + | chr4.2:926841-926860 | MS.gene62646:intron | 25.0% |
| !!! | GCTTTTGAAATACTTTAACA+AGG | - | chr4.2:924105-924124 | None:intergenic | 25.0% |
| !!! | GTTAGTGGTTTTATTCATTT+TGG | + | chr4.2:923351-923370 | MS.gene62646:intron | 25.0% |
| !!! | TGCTTGTTTTTTTTTTGTTC+AGG | + | chr4.2:924069-924088 | MS.gene62646:intron | 25.0% |
| !!! | TTCTTTGATTTCATGCTTTT+CGG | + | chr4.2:922214-922233 | MS.gene62646:intron | 25.0% |
| !!! | TTGTTTCTAAATGTTTCAGA+GGG | + | chr4.2:925488-925507 | MS.gene62646:intron | 25.0% |
| !!! | TTTTGAAAGCTTCTGAATTA+AGG | + | chr4.2:922564-922583 | MS.gene62646:intron | 25.0% |
| AAAAAAAAAAGGGGGTAACT+CGG | - | chr4.2:925807-925826 | None:intergenic | 30.0% | |
| AAAACCTATGTTGTCAATAG+TGG | - | chr4.2:922548-922567 | None:intergenic | 30.0% | |
| AAAGTGAAGTAATTGACGAA+TGG | - | chr4.2:925665-925684 | None:intergenic | 30.0% | |
| AATATACTTTCCTTACCTGA+AGG | - | chr4.2:926121-926140 | None:intergenic | 30.0% | |
| AGAGTGATTACATACATAAG+GGG | - | chr4.2:922184-922203 | None:intergenic | 30.0% | |
| AGATTTGAGAGTCCTATTAA+CGG | - | chr4.2:923959-923978 | None:intergenic | 30.0% | |
| ATGAAAAAACTTAAGTCCTC+CGG | - | chr4.2:923018-923037 | None:intergenic | 30.0% | |
| ATTGTATGATTCTGATAGGA+GGG | - | chr4.2:925911-925930 | None:intergenic | 30.0% | |
| CAACGAAAATTGAGAATTGA+GGG | - | chr4.2:923589-923608 | None:intergenic | 30.0% | |
| CAGCCACACAAAAAAAAAAA+AGG | - | chr4.2:925818-925837 | None:intergenic | 30.0% | |
| CCACACAAAAAAAAAAAAGG+GGG | - | chr4.2:925815-925834 | None:intergenic | 30.0% | |
| GAAATACTTTAACAAGGAGA+CGG | - | chr4.2:924099-924118 | None:intergenic | 30.0% | |
| GCCACACAAAAAAAAAAAAG+GGG | - | chr4.2:925816-925835 | None:intergenic | 30.0% | |
| GCTTTATGGTCTTCAAAATA+AGG | - | chr4.2:924680-924699 | None:intergenic | 30.0% | |
| GTTCAAATTCTACTACACAA+TGG | - | chr4.2:922417-922436 | None:intergenic | 30.0% | |
| TACCTTTGATACAAGTAATG+CGG | - | chr4.2:922805-922824 | None:intergenic | 30.0% | |
| TGACATTTAGAAGAAAAGCT+TGG | - | chr4.2:924285-924304 | None:intergenic | 30.0% | |
| TTATGGTCTTCAAAATAAGG+AGG | - | chr4.2:924677-924696 | None:intergenic | 30.0% | |
| TTGAAAGCTTCTGAATTAAG+GGG | + | chr4.2:922566-922585 | MS.gene62646:intron | 30.0% | |
| TTTCTTCACTCCTTTATCTT+AGG | + | chr4.2:923102-923121 | MS.gene62646:intron | 30.0% | |
| ! | AAACAAAGATGATGCTCTTT+TGG | + | chr4.2:924222-924241 | MS.gene62646:CDS | 30.0% |
| ! | AGCAATAGTCTTTTCTTTGA+CGG | - | chr4.2:925163-925182 | None:intergenic | 30.0% |
| ! | AGTCTTAGAAAGTAGTCTTA+TGG | - | chr4.2:926301-926320 | None:intergenic | 30.0% |
| ! | ATATGCTAGTTTCAAGTCTA+AGG | + | chr4.2:923446-923465 | MS.gene62646:CDS | 30.0% |
| ! | ATGGACTGCATTGATAATAT+TGG | + | chr4.2:923311-923330 | MS.gene62646:intron | 30.0% |
| ! | CATTATTGCATTGGCATAAA+TGG | - | chr4.2:924742-924761 | None:intergenic | 30.0% |
| ! | GTTGGAATGAGAATGTTTTT+GGG | + | chr4.2:922691-922710 | MS.gene62646:intron | 30.0% |
| ! | TAAAGAATTTTTAACAGCGG+TGG | + | chr4.2:924027-924046 | MS.gene62646:intron | 30.0% |
| ! | TGTTGGAATGAGAATGTTTT+TGG | + | chr4.2:922690-922709 | MS.gene62646:intron | 30.0% |
| !! | ATGTTGGTTCTTATACTGTT+TGG | + | chr4.2:924628-924647 | MS.gene62646:intron | 30.0% |
| !! | GAGTTTATTTTCAATCGTGT+AGG | + | chr4.2:922337-922356 | MS.gene62646:intron | 30.0% |
| !! | GTATTCTCTAAGATTCACAA+AGG | - | chr4.2:923765-923784 | None:intergenic | 30.0% |
| !! | TAGTACAAAGTGTTGTCAAT+TGG | + | chr4.2:922466-922485 | MS.gene62646:intron | 30.0% |
| !! | TTGGAATGAGAATGTTTTTG+GGG | + | chr4.2:922692-922711 | MS.gene62646:intron | 30.0% |
| !! | TTTTCAGCCAATTTTGGTAT+TGG | + | chr4.2:926358-926377 | MS.gene62646:CDS | 30.0% |
| !!! | TCAGCATACATTTTTTCACT+TGG | - | chr4.2:924463-924482 | None:intergenic | 30.0% |
| AAAAAAAAAGGGGGTAACTC+GGG | - | chr4.2:925806-925825 | None:intergenic | 35.0% | |
| AAGTTTCACTGTTGAAGTAG+TGG | - | chr4.2:926529-926548 | None:intergenic | 35.0% | |
| AATCCTGTGAAACATCAAAC+AGG | - | chr4.2:923186-923205 | None:intergenic | 35.0% | |
| AATTATCCTTGACAAGCATG+AGG | + | chr4.2:926209-926228 | MS.gene62646:CDS | 35.0% | |
| AATTCTCACCTAGAAGAGTA+TGG | - | chr4.2:923219-923238 | None:intergenic | 35.0% | |
| AGAGGGAGAAAACAAAACTA+TGG | - | chr4.2:924820-924839 | None:intergenic | 35.0% | |
| AGGAACAAAAACCTCAAGAA+TGG | - | chr4.2:924857-924876 | None:intergenic | 35.0% | |
| ATCCTGTGAAACATCAAACA+GGG | - | chr4.2:923185-923204 | None:intergenic | 35.0% | |
| ATGCCACCATAACGTAATAT+TGG | - | chr4.2:925598-925617 | None:intergenic | 35.0% | |
| ATTAAAGGGATGAAAAGGGA+AGG | - | chr4.2:923862-923881 | None:intergenic | 35.0% | |
| ATTGAGGGAACTCAAAGTTA+AGG | - | chr4.2:923574-923593 | None:intergenic | 35.0% | |
| CAAATTCTACTACACAATGG+TGG | - | chr4.2:922414-922433 | None:intergenic | 35.0% | |
| CAATCCACTATTGACAACAT+AGG | + | chr4.2:922541-922560 | MS.gene62646:intron | 35.0% | |
| CAGATATGTTCCAGTTAAGT+TGG | + | chr4.2:926976-926995 | MS.gene62646:CDS | 35.0% | |
| CAGGATCCAATATTACGTTA+TGG | + | chr4.2:925589-925608 | MS.gene62646:CDS | 35.0% | |
| CATTCGAGTACACATCTTAA+TGG | + | chr4.2:927167-927186 | MS.gene62646:CDS | 35.0% | |
| CTCAAGAATGGGAAATTACA+GGG | - | chr4.2:924845-924864 | None:intergenic | 35.0% | |
| GAATCTTAGAGAATACAGAC+AGG | + | chr4.2:923769-923788 | MS.gene62646:CDS | 35.0% | |
| GAGGGAGAAAACAAAACTAT+GGG | - | chr4.2:924819-924838 | None:intergenic | 35.0% | |
| GATCCAATATTACGTTATGG+TGG | + | chr4.2:925592-925611 | MS.gene62646:CDS | 35.0% | |
| GATTGTATGATTCTGATAGG+AGG | - | chr4.2:925912-925931 | None:intergenic | 35.0% | |
| GCAACGAAAATTGAGAATTG+AGG | - | chr4.2:923590-923609 | None:intergenic | 35.0% | |
| GGAAAATACCAACAAGCTAT+GGG | + | chr4.2:923638-923657 | MS.gene62646:CDS | 35.0% | |
| GGAACAAAAACCTCAAGAAT+GGG | - | chr4.2:924856-924875 | None:intergenic | 35.0% | |
| GTCTATACGCAGAATATATC+CGG | + | chr4.2:923827-923846 | MS.gene62646:intron | 35.0% | |
| GTGAAAAAATGTATGCTGAG+AGG | + | chr4.2:924464-924483 | MS.gene62646:CDS | 35.0% | |
| TAATGTATGCATTACCTGCA+TGG | - | chr4.2:926709-926728 | None:intergenic | 35.0% | |
| TACAATCCACATGTTCGTTA+CGG | + | chr4.2:925925-925944 | MS.gene62646:CDS | 35.0% | |
| TACTTTCCTGAGGGAAAATT+TGG | + | chr4.2:924782-924801 | MS.gene62646:CDS | 35.0% | |
| TAGAATCTCAAAAGTAGGCT+CGG | - | chr4.2:926897-926916 | None:intergenic | 35.0% | |
| TCAGTAATAGCAAGAACTTC+AGG | - | chr4.2:927046-927065 | None:intergenic | 35.0% | |
| TCGTTGCATTTCTTCAATTC+AGG | + | chr4.2:923603-923622 | MS.gene62646:intron | 35.0% | |
| TCTTCAATTCAGGTGTATTG+TGG | + | chr4.2:923613-923632 | MS.gene62646:intron | 35.0% | |
| TGACAAATGCTCAGATAATC+TGG | - | chr4.2:924136-924155 | None:intergenic | 35.0% | |
| TGAGACAAGAACTCAAACTT+TGG | - | chr4.2:926459-926478 | None:intergenic | 35.0% | |
| TGGAAAATACCAACAAGCTA+TGG | + | chr4.2:923637-923656 | MS.gene62646:CDS | 35.0% | |
| TTAAAGGGATGAAAAGGGAA+GGG | - | chr4.2:923861-923880 | None:intergenic | 35.0% | |
| TTGTCAGTGTCTTATGTTCT+TGG | + | chr4.2:924150-924169 | MS.gene62646:CDS | 35.0% | |
| ! | GCAATAGTCTTTTCTTTGAC+GGG | - | chr4.2:925162-925181 | None:intergenic | 35.0% |
| ! | GTGGATTGTATGATTCTGAT+AGG | - | chr4.2:925915-925934 | None:intergenic | 35.0% |
| ! | TGTTTTGTCAACATCAGCTA+AGG | + | chr4.2:926557-926576 | MS.gene62646:CDS | 35.0% |
| ! | TTGCAGTTTTCAGCCAATTT+TGG | + | chr4.2:926352-926371 | MS.gene62646:CDS | 35.0% |
| ! | TTGGGGTATTCAAAAAGTGA+AGG | - | chr4.2:926489-926508 | None:intergenic | 35.0% |
| !! | CAATAGTGGATTGCAGAAAA+TGG | - | chr4.2:922534-922553 | None:intergenic | 35.0% |
| !! | TAAGGTAAAGGTGTTTCACT+CGG | + | chr4.2:925426-925445 | MS.gene62646:intron | 35.0% |
| !! | TACAAAGTGTTGTCAATTGG+CGG | + | chr4.2:922469-922488 | MS.gene62646:intron | 35.0% |
| !! | TCATCCTTTTTGATTGTACC+CGG | + | chr4.2:922977-922996 | MS.gene62646:intron | 35.0% |
| !! | TTTTCACCAACGGCTTTAAT+CGG | + | chr4.2:926411-926430 | MS.gene62646:CDS | 35.0% |
| !!! | ATTTTTTCACTTGGATCCTC+AGG | - | chr4.2:924454-924473 | None:intergenic | 35.0% |
| !!! | CCCCCTTTTTTTTTTTTGTG+TGG | + | chr4.2:925812-925831 | MS.gene62646:intron | 35.0% |
| !!! | GTTGTTGATTTTGTTCGTCA+GGG | + | chr4.2:926030-926049 | MS.gene62646:CDS | 35.0% |
| !!! | TGTTGTTGATTTTGTTCGTC+AGG | + | chr4.2:926029-926048 | MS.gene62646:CDS | 35.0% |
| !!! | TTTTGGTGTTGACCGTTAAT+AGG | + | chr4.2:923944-923963 | MS.gene62646:intron | 35.0% |
| AATGAGACAAATGTTTGCGC+TGG | + | chr4.2:923995-924014 | MS.gene62646:intron | 40.0% | |
| ACAAGAAGTGACAATGTGCA+AGG | + | chr4.2:923707-923726 | MS.gene62646:CDS | 40.0% | |
| ACCAGATGATGTTCCAATGA+CGG | + | chr4.2:924399-924418 | MS.gene62646:CDS | 40.0% | |
| AGAATACAGACAGGAGGTAA+GGG | + | chr4.2:923778-923797 | MS.gene62646:intron | 40.0% | |
| AGAATCTCAAAAGTAGGCTC+GGG | - | chr4.2:926896-926915 | None:intergenic | 40.0% | |
| AGGAGTTTGATCAGCATCAA+AGG | + | chr4.2:922772-922791 | MS.gene62646:CDS | 40.0% | |
| ATACATAAGGGGAACACTTG+TGG | - | chr4.2:922173-922192 | None:intergenic | 40.0% | |
| ATCCAATCTCCTGCATTCAA+TGG | - | chr4.2:923669-923688 | None:intergenic | 40.0% | |
| ATGCTCAGATAATCTGGTGA+AGG | - | chr4.2:924130-924149 | None:intergenic | 40.0% | |
| ATGGGAAATTACAGGGAAAG+AGG | - | chr4.2:924838-924857 | None:intergenic | 40.0% | |
| ATTCAACATGGTGCATGTCT+AGG | + | chr4.2:925212-925231 | MS.gene62646:CDS | 40.0% | |
| CAATTCAGGTGTATTGTGGA+TGG | + | chr4.2:923617-923636 | MS.gene62646:intron | 40.0% | |
| CAGGAGATTGGATAAACTTG+AGG | + | chr4.2:923676-923695 | MS.gene62646:CDS | 40.0% | |
| CCTCAAGAATGGGAAATTAC+AGG | - | chr4.2:924846-924865 | None:intergenic | 40.0% | |
| CCTGTAATTTCCCATTCTTG+AGG | + | chr4.2:924843-924862 | MS.gene62646:intron | 40.0% | |
| CTCTGATTTCTTCTCTGTTG+GGG | - | chr4.2:926873-926892 | None:intergenic | 40.0% | |
| GACTATGTCCATACTCTTCT+AGG | + | chr4.2:923208-923227 | MS.gene62646:CDS | 40.0% | |
| GATGTTGACAAAACAGCAGT+TGG | - | chr4.2:926552-926571 | None:intergenic | 40.0% | |
| GCTCTGATTTCTTCTCTGTT+GGG | - | chr4.2:926874-926893 | None:intergenic | 40.0% | |
| GGAATTGCTCTTACGGTTTA+CGG | + | chr4.2:925520-925539 | MS.gene62646:CDS | 40.0% | |
| GGTCTTCAAAATAAGGAGGT+CGG | - | chr4.2:924673-924692 | None:intergenic | 40.0% | |
| GTTGAGACTTTGGCAATGAA+AGG | - | chr4.2:924315-924334 | None:intergenic | 40.0% | |
| GTTGAGCAGAGCTACTAATT+GGG | + | chr4.2:924894-924913 | MS.gene62646:CDS | 40.0% | |
| TAAGAAAGCTGAGGAACAGA+AGG | + | chr4.2:926596-926615 | MS.gene62646:CDS | 40.0% | |
| TAGCGGAACAGCAAACAATA+AGG | + | chr4.2:925639-925658 | MS.gene62646:CDS | 40.0% | |
| TATCAAAGTAGACCCTAGAC+TGG | + | chr4.2:923482-923501 | MS.gene62646:CDS | 40.0% | |
| TCAACAACATCCGAAGTCAA+AGG | - | chr4.2:926018-926037 | None:intergenic | 40.0% | |
| TCCAGCATGCATTATTGCAT+TGG | - | chr4.2:924751-924770 | None:intergenic | 40.0% | |
| TCCTGTGAAACATCAAACAG+GGG | - | chr4.2:923184-923203 | None:intergenic | 40.0% | |
| TCTAACAAATCCAGCAAGAG+TGG | + | chr4.2:926913-926932 | MS.gene62646:CDS | 40.0% | |
| TCTTAGAGAATACAGACAGG+AGG | + | chr4.2:923772-923791 | MS.gene62646:CDS | 40.0% | |
| TGAGAGTTTGTACGAAGATG+AGG | + | chr4.2:922752-922771 | MS.gene62646:CDS | 40.0% | |
| TGAGTAGAATCTGCATCACT+GGG | - | chr4.2:924361-924380 | None:intergenic | 40.0% | |
| TGCCGCATTACTTGTATCAA+AGG | + | chr4.2:922800-922819 | MS.gene62646:CDS | 40.0% | |
| TGGGAAATTACAGGGAAAGA+GGG | - | chr4.2:924837-924856 | None:intergenic | 40.0% | |
| TTAATGAACTTCTCCTGAGC+AGG | - | chr4.2:926941-926960 | None:intergenic | 40.0% | |
| TTCACTGTTGAAGTAGTGGT+GGG | - | chr4.2:926525-926544 | None:intergenic | 40.0% | |
| TTTCACTGTTGAAGTAGTGG+TGG | - | chr4.2:926526-926545 | None:intergenic | 40.0% | |
| ! | AAAGGGAAGGGAAGATTTTC+CGG | - | chr4.2:923849-923868 | None:intergenic | 40.0% |
| ! | AACTCACCAAATTTTCCCTC+AGG | - | chr4.2:924791-924810 | None:intergenic | 40.0% |
| ! | AATTTTCTCCAATTGTCGCC+TGG | - | chr4.2:926193-926212 | None:intergenic | 40.0% |
| ! | GACTCTAAAGGTTGAGACTT+TGG | - | chr4.2:924325-924344 | None:intergenic | 40.0% |
| ! | GATTAAAGCCGTTGGTGAAA+AGG | - | chr4.2:926412-926431 | None:intergenic | 40.0% |
| ! | GGAAACAGTCTCACTTGTTA+TGG | - | chr4.2:924558-924577 | None:intergenic | 40.0% |
| ! | GTTGGTACTTGGTAGTATGT+TGG | + | chr4.2:924612-924631 | MS.gene62646:intron | 40.0% |
| ! | TTAAGAAGCACAAACCCTGA+AGG | - | chr4.2:927004-927023 | None:intergenic | 40.0% |
| !! | CAGTTGGTGTTACTTGTTAG+TGG | + | chr4.2:923336-923355 | MS.gene62646:intron | 40.0% |
| !! | CTAATGTGTTGTTTATGGCC+AGG | + | chr4.2:925187-925206 | MS.gene62646:intron | 40.0% |
| !! | CTCACTTGTTATGGCTGTAA+AGG | - | chr4.2:924549-924568 | None:intergenic | 40.0% |
| !! | GAGGGTACCAATACCAAAAT+TGG | - | chr4.2:926368-926387 | None:intergenic | 40.0% |
| !!! | CGATGCTGTTTTTGCACATA+CGG | + | chr4.2:922875-922894 | MS.gene62646:intron | 40.0% |
| AACCGTGGATACTTTCCTGA+GGG | + | chr4.2:924773-924792 | MS.gene62646:CDS | 45.0% | |
| AACTTAAGTCCTCCGGTGAT+TGG | - | chr4.2:923011-923030 | None:intergenic | 45.0% | |
| AAGTCTTCCAGTGAGAAGGA+TGG | + | chr4.2:926678-926697 | MS.gene62646:CDS | 45.0% | |
| AATATGCTTGCAACTCCCTC+TGG | - | chr4.2:924181-924200 | None:intergenic | 45.0% | |
| AATTGCACCCATCTTGCTCA+TGG | - | chr4.2:926238-926257 | None:intergenic | 45.0% | |
| ACAATCTGGTCGATAGCTTC+TGG | + | chr4.2:922137-922156 | MS.gene62646:CDS | 45.0% | |
| ACAGCACAAACCCTAATGCT+AGG | - | chr4.2:925729-925748 | None:intergenic | 45.0% | |
| AGAGGGAGTTGCAAGCATAT+TGG | + | chr4.2:924180-924199 | MS.gene62646:CDS | 45.0% | |
| AGATGCTGGATTTCGTCTCA+TGG | + | chr4.2:923058-923077 | MS.gene62646:intron | 45.0% | |
| AGCTATCGACCAGATTGTTG+AGG | - | chr4.2:922135-922154 | None:intergenic | 45.0% | |
| AGGAAAGTCTTCCAGTGAGA+AGG | + | chr4.2:926674-926693 | MS.gene62646:CDS | 45.0% | |
| ATCGACCAGATTGTTGAGGT+TGG | - | chr4.2:922131-922150 | None:intergenic | 45.0% | |
| ATGCACCATGTTGAATGACC+TGG | - | chr4.2:925208-925227 | None:intergenic | 45.0% | |
| ATGTTCTTGGATGAGCCAGA+GGG | + | chr4.2:924163-924182 | MS.gene62646:CDS | 45.0% | |
| ATTCATGCCAACCATGGAGA+GGG | + | chr4.2:925066-925085 | MS.gene62646:CDS | 45.0% | |
| ATTGTTTGATGCCCTCTCCA+TGG | - | chr4.2:925080-925099 | None:intergenic | 45.0% | |
| CAAAGGCTCCAGCAAAGATA+TGG | - | chr4.2:926001-926020 | None:intergenic | 45.0% | |
| CATAGAGGTCATTTGCAGCA+GGG | + | chr4.2:924952-924971 | MS.gene62646:CDS | 45.0% | |
| CATAGCAATGGCTATGGTCA+TGG | + | chr4.2:926059-926078 | MS.gene62646:CDS | 45.0% | |
| CATCTCCACAGACTGCTTTA+TGG | - | chr4.2:924694-924713 | None:intergenic | 45.0% | |
| CCACAATTGCTTCCAGTCTA+GGG | - | chr4.2:923497-923516 | None:intergenic | 45.0% | |
| CTGAGTAGAATCTGCATCAC+TGG | - | chr4.2:924362-924381 | None:intergenic | 45.0% | |
| GAAGACCATAAAGCAGTCTG+TGG | + | chr4.2:924686-924705 | MS.gene62646:CDS | 45.0% | |
| GAAGCCGGGTACAATCAAAA+AGG | - | chr4.2:922984-923003 | None:intergenic | 45.0% | |
| GACCATAGCCATTGCTATGA+GGG | - | chr4.2:926058-926077 | None:intergenic | 45.0% | |
| GAGAATACAGACAGGAGGTA+AGG | + | chr4.2:923777-923796 | MS.gene62646:intron | 45.0% | |
| GAGGATACCATGAGCAAGAT+GGG | + | chr4.2:926228-926247 | MS.gene62646:CDS | 45.0% | |
| GATAGGAGGGAAACAATTCG+AGG | - | chr4.2:925898-925917 | None:intergenic | 45.0% | |
| GATGAAGAACTCTGCAATCC+TGG | - | chr4.2:927109-927128 | None:intergenic | 45.0% | |
| GATGTGTACTCGAATGGTTG+AGG | - | chr4.2:927163-927182 | None:intergenic | 45.0% | |
| GCAGAGTTCTTCATCAGCAA+TGG | + | chr4.2:927114-927133 | MS.gene62646:CDS | 45.0% | |
| GCAGATTCTACTCAGAATGC+TGG | + | chr4.2:924367-924386 | MS.gene62646:CDS | 45.0% | |
| GCCAATGCAATAATGCATGC+TGG | + | chr4.2:924747-924766 | MS.gene62646:CDS | 45.0% | |
| GGTTGAGCAGAGCTACTAAT+TGG | + | chr4.2:924893-924912 | MS.gene62646:CDS | 45.0% | |
| GGTTTACGGAAGAGAAGAAG+AGG | + | chr4.2:925534-925553 | MS.gene62646:CDS | 45.0% | |
| GTGAATCTTCAGGGAGATGT+GGG | - | chr4.2:922101-922120 | None:intergenic | 45.0% | |
| TAGTGAGGCCATATCTTTGC+TGG | + | chr4.2:925990-926009 | MS.gene62646:CDS | 45.0% | |
| TATCAGTATGGGCCTACTCA+TGG | + | chr4.2:925334-925353 | MS.gene62646:CDS | 45.0% | |
| TATGGCCAGGTCATTCAACA+TGG | + | chr4.2:925200-925219 | MS.gene62646:intron | 45.0% | |
| TATGTTCTTGGATGAGCCAG+AGG | + | chr4.2:924162-924181 | MS.gene62646:CDS | 45.0% | |
| TCCACAATTGCTTCCAGTCT+AGG | - | chr4.2:923498-923517 | None:intergenic | 45.0% | |
| TCCCCTGTTTGATGTTTCAC+AGG | + | chr4.2:923180-923199 | MS.gene62646:CDS | 45.0% | |
| TCCGTCATTGGAACATCATC+TGG | - | chr4.2:924403-924422 | None:intergenic | 45.0% | |
| TCTCTCCAACCTCAACAATC+TGG | + | chr4.2:922123-922142 | MS.gene62646:CDS | 45.0% | |
| TGACCATAGCCATTGCTATG+AGG | - | chr4.2:926059-926078 | None:intergenic | 45.0% | |
| TGAGGATACCATGAGCAAGA+TGG | + | chr4.2:926227-926246 | MS.gene62646:CDS | 45.0% | |
| TGCATGTCTAGGTCTTGGAT+TGG | + | chr4.2:925223-925242 | MS.gene62646:CDS | 45.0% | |
| TGCCATTGAATGCAGGAGAT+TGG | + | chr4.2:923664-923683 | MS.gene62646:CDS | 45.0% | |
| TGGCATAAATGGTAGCACTG+TGG | - | chr4.2:924731-924750 | None:intergenic | 45.0% | |
| TGGTATCCTCATGCTTGTCA+AGG | - | chr4.2:926218-926237 | None:intergenic | 45.0% | |
| TTACGGAAGAGAAGAAGAGG+CGG | + | chr4.2:925537-925556 | MS.gene62646:CDS | 45.0% | |
| TTATGGTGGCATGTATGCAC+TGG | + | chr4.2:925606-925625 | MS.gene62646:CDS | 45.0% | |
| TTCAGACCGATTAAAGCCGT+TGG | - | chr4.2:926420-926439 | None:intergenic | 45.0% | |
| TTCTGACATGCGTGTATTCC+AGG | + | chr4.2:926172-926191 | MS.gene62646:intron | 45.0% | |
| TTCTTCATCAGCAATGGCTG+TGG | + | chr4.2:927120-927139 | MS.gene62646:CDS | 45.0% | |
| TTGGGCCAAATTCAGTGCAA+CGG | + | chr4.2:924912-924931 | MS.gene62646:CDS | 45.0% | |
| TTTCTTACTAGCCCTGGCTT+TGG | - | chr4.2:926583-926602 | None:intergenic | 45.0% | |
| ! | ATCTCTAGGAACTGCTGATG+AGG | + | chr4.2:925247-925266 | MS.gene62646:CDS | 45.0% |
| ! | ATGTGAGTGATGATGTCAGG+AGG | + | chr4.2:925695-925714 | MS.gene62646:CDS | 45.0% |
| ! | CTGATGTGAGTGATGATGTC+AGG | + | chr4.2:925692-925711 | MS.gene62646:CDS | 45.0% |
| ! | GAATCTGCATCACTGGGTTT+TGG | - | chr4.2:924355-924374 | None:intergenic | 45.0% |
| ! | GACTTTCCTTTTCCAGCACT+TGG | - | chr4.2:926663-926682 | None:intergenic | 45.0% |
| ! | GAGCAAGATGGGTGCAATTT+TGG | + | chr4.2:926239-926258 | MS.gene62646:CDS | 45.0% |
| ! | GATGATGTTCCAATGACGGA+CGG | + | chr4.2:924403-924422 | MS.gene62646:CDS | 45.0% |
| ! | GGCTCTGATTTCTTCTCTGT+TGG | - | chr4.2:926875-926894 | None:intergenic | 45.0% |
| ! | TACACTGATAGTGCTGTTGC+CGG | + | chr4.2:925299-925318 | MS.gene62646:CDS | 45.0% |
| ! | TGTGTGGCTGTAGTCTGTTT+TGG | + | chr4.2:925828-925847 | MS.gene62646:intron | 45.0% |
| ! | TTTGCTGGAGCCTTTGACTT+CGG | + | chr4.2:926005-926024 | MS.gene62646:CDS | 45.0% |
| !! | AAGCTTGGCCTTTTCACCAA+CGG | + | chr4.2:926401-926420 | MS.gene62646:CDS | 45.0% |
| !! | AGCTCTGGGAATTGCTCTTA+CGG | + | chr4.2:925513-925532 | MS.gene62646:CDS | 45.0% |
| !! | ATGATGTTCCAATGACGGAC+GGG | + | chr4.2:924404-924423 | MS.gene62646:CDS | 45.0% |
| !! | ATGTTTCAGAGGGTTAGCTC+TGG | + | chr4.2:925498-925517 | MS.gene62646:intron | 45.0% |
| !! | CAGTTAAGTTGGCACCTTCA+GGG | + | chr4.2:926987-927006 | MS.gene62646:CDS | 45.0% |
| !! | GGACTTGGTGTTATCCATAG+AGG | + | chr4.2:924937-924956 | MS.gene62646:CDS | 45.0% |
| !! | TACTGCTACTGACTCACGAT+AGG | + | chr4.2:922438-922457 | MS.gene62646:intron | 45.0% |
| !! | TGTTTCAGAGGGTTAGCTCT+GGG | + | chr4.2:925499-925518 | MS.gene62646:intron | 45.0% |
| !! | TTCCCTCAGGAAAGTATCCA+CGG | - | chr4.2:924778-924797 | None:intergenic | 45.0% |
| !! | TTTGGCTCTACGGACTCTAA+AGG | - | chr4.2:924337-924356 | None:intergenic | 45.0% |
| !!! | ATCACTGGGTTTTGGCTCTA+CGG | - | chr4.2:924347-924366 | None:intergenic | 45.0% |
| !! | TCTAATAAAATATTATTAAA+AGG | - | chr4.2:924579-924598 | None:intergenic | 5.0% |
| AATGCATGCTGGAACAACCG+TGG | + | chr4.2:924758-924777 | MS.gene62646:CDS | 50.0% | |
| ACTCAGAATGCTGGTGTGAG+TGG | + | chr4.2:924376-924395 | MS.gene62646:CDS | 50.0% | |
| AGGACAGAACTAACCTGCTC+TGG | - | chr4.2:925760-925779 | None:intergenic | 50.0% | |
| AGTATGGGCCTACTCATGGT+TGG | + | chr4.2:925338-925357 | MS.gene62646:CDS | 50.0% | |
| ATCAGCAATGGCTGTGGATG+AGG | + | chr4.2:927126-927145 | MS.gene62646:CDS | 50.0% | |
| ATCAGCTAAGGCCAAAGCCA+GGG | + | chr4.2:926569-926588 | MS.gene62646:CDS | 50.0% | |
| ATTCGAGGAGTCTGCAGTGT+AGG | - | chr4.2:925883-925902 | None:intergenic | 50.0% | |
| ATTCGCGTGTTGGAACCTTC+AGG | + | chr4.2:926103-926122 | MS.gene62646:CDS | 50.0% | |
| CAACCGTGGATACTTTCCTG+AGG | + | chr4.2:924772-924791 | MS.gene62646:CDS | 50.0% | |
| CATGGTGCATGTCTAGGTCT+TGG | + | chr4.2:925218-925237 | MS.gene62646:CDS | 50.0% | |
| CATTTCTTCCGCCAGCATCA+AGG | - | chr4.2:926275-926294 | None:intergenic | 50.0% | |
| CCAGAGAAGCCGTGGTTTAA+CGG | - | chr4.2:925456-925475 | None:intergenic | 50.0% | |
| CCATAGAGGTCATTTGCAGC+AGG | + | chr4.2:924951-924970 | MS.gene62646:CDS | 50.0% | |
| CCCTAGACTGGAAGCAATTG+TGG | + | chr4.2:923494-923513 | MS.gene62646:CDS | 50.0% | |
| CCGGCTTCTAAACCAATCAC+CGG | + | chr4.2:922996-923015 | MS.gene62646:intron | 50.0% | |
| CCTGCTGCAAATGACCTCTA+TGG | - | chr4.2:924954-924973 | None:intergenic | 50.0% | |
| CGTGAATCTTCAGGGAGATG+TGG | - | chr4.2:922102-922121 | None:intergenic | 50.0% | |
| CGTGTATTCCAGGCGACAAT+TGG | + | chr4.2:926182-926201 | MS.gene62646:intron | 50.0% | |
| CGTGTTGGAACCTTCAGGTA+AGG | + | chr4.2:926108-926127 | MS.gene62646:intron | 50.0% | |
| CTCAGCTTTCTTACTAGCCC+TGG | - | chr4.2:926589-926608 | None:intergenic | 50.0% | |
| CTCGGCAATCCGTTAAACCA+CGG | + | chr4.2:925444-925463 | MS.gene62646:intron | 50.0% | |
| CTTGGAGCTGATGTAGAGTC+AGG | - | chr4.2:926645-926664 | None:intergenic | 50.0% | |
| GAAGCTAGTGATTCGCGTGT+TGG | + | chr4.2:926093-926112 | MS.gene62646:CDS | 50.0% | |
| GACTCACTATCCTATGCCCT+TGG | + | chr4.2:923151-923170 | MS.gene62646:CDS | 50.0% | |
| GAGGCTGCTGGTATCAGTAT+GGG | + | chr4.2:925323-925342 | MS.gene62646:CDS | 50.0% | |
| GATTCATGCCAACCATGGAG+AGG | + | chr4.2:925065-925084 | MS.gene62646:CDS | 50.0% | |
| GCAAGAACTTCAGGCTCAGT+AGG | - | chr4.2:927037-927056 | None:intergenic | 50.0% | |
| GCATCTACGACATCAACTGC+TGG | + | chr4.2:927073-927092 | MS.gene62646:CDS | 50.0% | |
| GCTTCTAAACCAATCACCGG+AGG | + | chr4.2:922999-923018 | MS.gene62646:intron | 50.0% | |
| GGAACACTTGTGGAGATCTC+TGG | - | chr4.2:922163-922182 | None:intergenic | 50.0% | |
| GGTAGTCCATACTCAGAAGG+TGG | + | chr4.2:925021-925040 | MS.gene62646:CDS | 50.0% | |
| GGTCTGATTCATGCCAACCA+TGG | + | chr4.2:925060-925079 | MS.gene62646:CDS | 50.0% | |
| GGTGGTAGTCCATACTCAGA+AGG | + | chr4.2:925018-925037 | MS.gene62646:CDS | 50.0% | |
| GGTTGGAACAGGCAGTGATA+AGG | + | chr4.2:925355-925374 | MS.gene62646:CDS | 50.0% | |
| GTGTACTCGAATGGTTGAGG+AGG | - | chr4.2:927160-927179 | None:intergenic | 50.0% | |
| GTTGGCATGAATCAGACCGA+GGG | - | chr4.2:925058-925077 | None:intergenic | 50.0% | |
| TCCAGCCGTTGCACTGAATT+TGG | - | chr4.2:924920-924939 | None:intergenic | 50.0% | |
| TCGAATGGTTGAGGAGGTTG+AGG | - | chr4.2:927154-927173 | None:intergenic | 50.0% | |
| TCTACATCAGCTCCAAGTGC+TGG | + | chr4.2:926648-926667 | MS.gene62646:CDS | 50.0% | |
| TCTACGACATCAACTGCTGG+CGG | + | chr4.2:927076-927095 | MS.gene62646:CDS | 50.0% | |
| TGAGCAGATGACTCGAGATC+AGG | + | chr4.2:925570-925589 | MS.gene62646:CDS | 50.0% | |
| TGAGGCTGCTGGTATCAGTA+TGG | + | chr4.2:925322-925341 | MS.gene62646:CDS | 50.0% | |
| TGCCCTCATAGCAATGGCTA+TGG | + | chr4.2:926053-926072 | MS.gene62646:CDS | 50.0% | |
| TGCCTGTTCCAACCATGAGT+AGG | - | chr4.2:925349-925368 | None:intergenic | 50.0% | |
| TGGGAACTGCCATTGAATGC+AGG | + | chr4.2:923657-923676 | MS.gene62646:CDS | 50.0% | |
| TTCTGCTGTCAATGTGCCTG+AGG | + | chr4.2:924435-924454 | MS.gene62646:CDS | 50.0% | |
| TTTGATGCCCTCTCCATGGT+TGG | - | chr4.2:925076-925095 | None:intergenic | 50.0% | |
| ! | AGAGCACCACCTTCTGAGTA+TGG | - | chr4.2:925030-925049 | None:intergenic | 50.0% |
| ! | CAGGGCTAGTAAGAAAGCTG+AGG | + | chr4.2:926587-926606 | MS.gene62646:CDS | 50.0% |
| ! | GCAGTTGATGTCGTAGATGC+AGG | - | chr4.2:927073-927092 | None:intergenic | 50.0% |
| ! | GGAGAGAGCGTGAATCTTCA+GGG | - | chr4.2:922110-922129 | None:intergenic | 50.0% |
| ! | TGATGATGTCAGGAGGACTG+CGG | + | chr4.2:925702-925721 | MS.gene62646:CDS | 50.0% |
| ! | TGGAGAGAGCGTGAATCTTC+AGG | - | chr4.2:922111-922130 | None:intergenic | 50.0% |
| ! | TGGCAGTTCCCATAGCTTGT+TGG | - | chr4.2:923649-923668 | None:intergenic | 50.0% |
| !! | ATGGGTGCAATTTTGGCCTC+CGG | + | chr4.2:926246-926265 | MS.gene62646:CDS | 50.0% |
| !! | CCAGTTAAGTTGGCACCTTC+AGG | + | chr4.2:926986-927005 | MS.gene62646:CDS | 50.0% |
| !! | CCGGTGATTGGTTTAGAAGC+CGG | - | chr4.2:922999-923018 | None:intergenic | 50.0% |
| !! | CCTGAAGGTGCCAACTTAAC+TGG | - | chr4.2:926989-927008 | None:intergenic | 50.0% |
| !! | CGGTGATTGGTTTAGAAGCC+GGG | - | chr4.2:922998-923017 | None:intergenic | 50.0% |
| !! | GGTCTTGGATTGGCATCTCT+AGG | + | chr4.2:925233-925252 | MS.gene62646:CDS | 50.0% |
| !! | TCAGCTCCAAGTGCTGGAAA+AGG | + | chr4.2:926654-926673 | MS.gene62646:CDS | 50.0% |
| !! | TGATGTTCCAATGACGGACG+GGG | + | chr4.2:924405-924424 | MS.gene62646:CDS | 50.0% |
| !! | TGGCATGTATGCACTGGCTT+TGG | + | chr4.2:925612-925631 | MS.gene62646:CDS | 50.0% |
| AAACAGGGGACCAGCTCCAA+GGG | - | chr4.2:923170-923189 | None:intergenic | 55.0% | |
| ACTAAGACCTGTACCCGCAC+AGG | - | chr4.2:925974-925993 | None:intergenic | 55.0% | |
| ACTGATACCAGCAGCCTCAC+CGG | - | chr4.2:925321-925340 | None:intergenic | 55.0% | |
| AGCAAGAGTGGTTCCTGCTC+AGG | + | chr4.2:926925-926944 | MS.gene62646:CDS | 55.0% | |
| AGGACTGCGGTCCTAGCATT+AGG | + | chr4.2:925715-925734 | MS.gene62646:CDS | 55.0% | |
| CATCAGCTAAGGCCAAAGCC+AGG | + | chr4.2:926568-926587 | MS.gene62646:CDS | 55.0% | |
| CCGTTAAACCACGGCTTCTC+TGG | + | chr4.2:925453-925472 | MS.gene62646:intron | 55.0% | |
| CTACGACATCAACTGCTGGC+GGG | + | chr4.2:927077-927096 | MS.gene62646:CDS | 55.0% | |
| CTATCCTATGCCCTTGGAGC+TGG | + | chr4.2:923157-923176 | MS.gene62646:CDS | 55.0% | |
| GAAGGATGGAGAAGCCATGC+AGG | + | chr4.2:926692-926711 | MS.gene62646:CDS | 55.0% | |
| GAGGTCATTTGCAGCAGGGA+AGG | + | chr4.2:924956-924975 | MS.gene62646:CDS | 55.0% | |
| GCCAAATTCAGTGCAACGGC+TGG | + | chr4.2:924916-924935 | MS.gene62646:CDS | 55.0% | |
| GCTGCTCCGTAACGAACATG+TGG | - | chr4.2:925934-925953 | None:intergenic | 55.0% | |
| GCTGTACTCTGATCCAGAGC+AGG | + | chr4.2:925744-925763 | MS.gene62646:CDS | 55.0% | |
| GGACTGCGGTCCTAGCATTA+GGG | + | chr4.2:925716-925735 | MS.gene62646:CDS | 55.0% | |
| GGCACATTGACAGCAGAAGC+TGG | - | chr4.2:924433-924452 | None:intergenic | 55.0% | |
| GGCCTACTCATGGTTGGAAC+AGG | + | chr4.2:925344-925363 | MS.gene62646:CDS | 55.0% | |
| GGCTTCTCCATCCTTCTCAC+TGG | - | chr4.2:926688-926707 | None:intergenic | 55.0% | |
| GGTGGTGCTCTTTATGCCCT+CGG | + | chr4.2:925039-925058 | MS.gene62646:CDS | 55.0% | |
| GGTTGGCATGAATCAGACCG+AGG | - | chr4.2:925059-925078 | None:intergenic | 55.0% | |
| GTGGGAACAGTCGTAGGCTT+GGG | - | chr4.2:926507-926526 | None:intergenic | 55.0% | |
| TATCAGAGCCAGAGAAGCCG+TGG | - | chr4.2:925464-925483 | None:intergenic | 55.0% | |
| TCCGCCAGCATCAAGGATTC+CGG | - | chr4.2:926268-926287 | None:intergenic | 55.0% | |
| TCCGGAATCCTTGATGCTGG+CGG | + | chr4.2:926264-926283 | MS.gene62646:CDS | 55.0% | |
| TCGTGCTGCGCAAGCTATCA+CGG | - | chr4.2:925107-925126 | None:intergenic | 55.0% | |
| TGAGCAGGAACCACTCTTGC+TGG | - | chr4.2:926926-926945 | None:intergenic | 55.0% | |
| TGCGGGTACAGGTCTTAGTG+AGG | + | chr4.2:925975-925994 | MS.gene62646:CDS | 55.0% | |
| TGCTGTGGGCATTTCCTGTG+CGG | + | chr4.2:925957-925976 | MS.gene62646:CDS | 55.0% | |
| TGGGAACAGTCGTAGGCTTG+GGG | - | chr4.2:926506-926525 | None:intergenic | 55.0% | |
| TTACGGAGCAGCTCTTGCTG+TGG | + | chr4.2:925942-925961 | MS.gene62646:CDS | 55.0% | |
| TTCAGTGCAACGGCTGGACT+TGG | + | chr4.2:924922-924941 | MS.gene62646:CDS | 55.0% | |
| ! | GTAGTGGTGGGAACAGTCGT+AGG | - | chr4.2:926513-926532 | None:intergenic | 55.0% |
| ! | TACGGAGCAGCTCTTGCTGT+GGG | + | chr4.2:925943-925962 | MS.gene62646:CDS | 55.0% |
| ! | TCAGGGTGCCCTCATAGCAA+TGG | + | chr4.2:926047-926066 | MS.gene62646:CDS | 55.0% |
| ! | TGATAGTGCTGTTGCCGGTG+AGG | + | chr4.2:925304-925323 | MS.gene62646:CDS | 55.0% |
| !! | GCACTGGCTTTGGCGTATAG+CGG | + | chr4.2:925622-925641 | MS.gene62646:CDS | 55.0% |
| ACGACGTTGGTCAGCTCAGC+CGG | + | chr4.2:922049-922068 | MS.gene62646:CDS | 60.0% | |
| AGGGGGTAACTCGGGACAAG+AGG | - | chr4.2:925798-925817 | None:intergenic | 60.0% | |
| AGTCCCACCCTGAGGCAAGT+AGG | - | chr4.2:924995-925014 | None:intergenic | 60.0% | |
| ATGGCGCCCTACTTGCCTCA+GGG | + | chr4.2:924985-925004 | MS.gene62646:CDS | 60.0% | |
| CAAACAGGGGACCAGCTCCA+AGG | - | chr4.2:923171-923190 | None:intergenic | 60.0% | |
| CAGCATGGCCAACATGCCAC+CGG | - | chr4.2:922071-922090 | None:intergenic | 60.0% | |
| CTTGCGCAGCACGACTGTTG+AGG | + | chr4.2:925113-925132 | MS.gene62646:CDS | 60.0% | |
| GATGTGGGACTCGTGCAGCA+TGG | - | chr4.2:922086-922105 | None:intergenic | 60.0% | |
| GCAGCAGGGAAGGTCACTGA+TGG | + | chr4.2:924966-924985 | MS.gene62646:CDS | 60.0% | |
| GCCAGCATCAAGGATTCCGG+AGG | - | chr4.2:926265-926284 | None:intergenic | 60.0% | |
| GCCTCCGGAATCCTTGATGC+TGG | + | chr4.2:926261-926280 | MS.gene62646:CDS | 60.0% | |
| GCTGTGGGCATTTCCTGTGC+GGG | + | chr4.2:925958-925977 | MS.gene62646:CDS | 60.0% | |
| GGCATTTCCTGTGCGGGTAC+AGG | + | chr4.2:925964-925983 | MS.gene62646:CDS | 60.0% | |
| GGTGGGAACAGTCGTAGGCT+TGG | - | chr4.2:926508-926527 | None:intergenic | 60.0% | |
| GTCCCACCCTGAGGCAAGTA+GGG | - | chr4.2:924994-925013 | None:intergenic | 60.0% | |
| TACTTGCCTCAGGGTGGGAC+TGG | + | chr4.2:924994-925013 | MS.gene62646:CDS | 60.0% | |
| TGCTGCGCAAGCTATCACGG+AGG | - | chr4.2:925104-925123 | None:intergenic | 60.0% | |
| ! | ACATCAACTGCTGGCGGGTC+AGG | + | chr4.2:927082-927101 | MS.gene62646:CDS | 60.0% |
| ACGTTGGTCAGCTCAGCCGG+TGG | + | chr4.2:922052-922071 | MS.gene62646:CDS | 65.0% | |
| CAGCTCAGCCGGTGGCATGT+TGG | + | chr4.2:922060-922079 | MS.gene62646:CDS | 65.0% | |
| CGCCCTACTTGCCTCAGGGT+GGG | + | chr4.2:924989-925008 | MS.gene62646:CDS | 65.0% | |
| GATGGCGCCCTACTTGCCTC+AGG | + | chr4.2:924984-925003 | MS.gene62646:CDS | 65.0% | |
| TTGCCTCAGGGTGGGACTGG+TGG | + | chr4.2:924997-925016 | MS.gene62646:CDS | 65.0% | |
| ! | GCTGGTTCCCCGTCCGTCAT+TGG | - | chr4.2:924415-924434 | None:intergenic | 65.0% |
| ! | GGGACCAGCTCCAAGGGCAT+AGG | - | chr4.2:923164-923183 | None:intergenic | 65.0% |
| CCACCACCAGTCCCACCCTG+AGG | - | chr4.2:925003-925022 | None:intergenic | 70.0% | |
| GCGCCCTACTTGCCTCAGGG+TGG | + | chr4.2:924988-925007 | MS.gene62646:CDS | 70.0% | |
| GCTGTTGCCGGTGAGGCTGC+TGG | + | chr4.2:925311-925330 | MS.gene62646:CDS | 70.0% | |
| ! | ACTGCTGGCGGGTCAGGACC+AGG | + | chr4.2:927088-927107 | MS.gene62646:CDS | 70.0% |
| ! | CCTCAGGGTGGGACTGGTGG+TGG | + | chr4.2:925000-925019 | MS.gene62646:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 922043 | 927186 | 922043 | ID=MS.gene62646 |
| chr4.2 | mRNA | 922043 | 927186 | 922043 | ID=MS.gene62646.t1;Parent=MS.gene62646 |
| chr4.2 | exon | 922043 | 922188 | 922043 | ID=MS.gene62646.t1.exon1;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 922043 | 922188 | 922043 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 922752 | 922821 | 922752 | ID=MS.gene62646.t1.exon2;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 922752 | 922821 | 922752 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 923124 | 923229 | 923124 | ID=MS.gene62646.t1.exon3;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 923124 | 923229 | 923124 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 923430 | 923532 | 923430 | ID=MS.gene62646.t1.exon4;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 923430 | 923532 | 923430 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 923625 | 923793 | 923625 | ID=MS.gene62646.t1.exon5;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 923625 | 923793 | 923625 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 924091 | 924563 | 924091 | ID=MS.gene62646.t1.exon6;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 924091 | 924563 | 924091 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 924668 | 924803 | 924668 | ID=MS.gene62646.t1.exon7;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 924668 | 924803 | 924668 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 924889 | 925134 | 924889 | ID=MS.gene62646.t1.exon8;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 924889 | 925134 | 924889 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 925209 | 925429 | 925209 | ID=MS.gene62646.t1.exon9;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 925209 | 925429 | 925209 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 925507 | 925765 | 925507 | ID=MS.gene62646.t1.exon10;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 925507 | 925765 | 925507 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 925892 | 926124 | 925892 | ID=MS.gene62646.t1.exon11;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 925892 | 926124 | 925892 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 926194 | 926713 | 926194 | ID=MS.gene62646.t1.exon12;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 926194 | 926713 | 926194 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| chr4.2 | exon | 926863 | 927186 | 926863 | ID=MS.gene62646.t1.exon13;Parent=MS.gene62646.t1 |
| chr4.2 | CDS | 926863 | 927186 | 926863 | ID=cds.MS.gene62646.t1;Parent=MS.gene62646.t1 |
| Gene Sequence |
| Protein sequence |
