Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051007.t1 | XP_003627474.1 | 99.1 | 542 | 5 | 0 | 1 | 542 | 1 | 542 | 1.50E-301 | 1044.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051007.t1 | Q9FK30 | 62.6 | 530 | 178 | 8 | 27 | 542 | 43 | 566 | 5.7e-188 | 658.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051007.t1 | G7L9X3 | 99.1 | 542 | 5 | 0 | 1 | 542 | 1 | 542 | 1.1e-301 | 1044.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene051007 | 0.808565 | 2.91E-50 | -1.69E-46 |
| MS.gene051007 | MS.gene054584 | 0.809675 | 1.68E-50 | -1.69E-46 |
| MS.gene051007 | MS.gene26381 | 0.825942 | 3.56E-54 | -1.69E-46 |
| MS.gene051007 | MS.gene32024 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene051007 | MS.gene32927 | 0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene051007 | MS.gene34286 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene051007 | MS.gene38303 | 0.81333 | 2.70E-51 | -1.69E-46 |
| MS.gene051007 | MS.gene79951 | 0.822516 | 2.27E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051007 | MS.gene81052 | PPI |
| MS.gene051007 | MS.gene25028 | PPI |
| MS.gene051007 | MS.gene08466 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051007.t1 | MTR_8g023490 | 99.077 | 542 | 5 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1117 |
| MS.gene051007.t1 | MTR_8g023490 | 99.174 | 484 | 4 | 0 | 1 | 484 | 1 | 484 | 0.0 | 997 |
| MS.gene051007.t1 | MTR_2g006810 | 77.391 | 115 | 22 | 2 | 251 | 364 | 502 | 613 | 5.29e-45 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051007.t1 | AT1G17270 | 60.424 | 566 | 193 | 8 | 3 | 542 | 4 | 564 | 0.0 | 688 |
| MS.gene051007.t1 | AT1G17270 | 60.424 | 566 | 193 | 8 | 3 | 542 | 4 | 564 | 0.0 | 688 |
| MS.gene051007.t1 | AT5G50420 | 60.457 | 569 | 190 | 9 | 3 | 542 | 4 | 566 | 0.0 | 672 |
| MS.gene051007.t1 | AT1G53770 | 59.253 | 562 | 188 | 10 | 6 | 542 | 18 | 563 | 0.0 | 660 |
| MS.gene051007.t1 | AT1G53770 | 55.333 | 600 | 189 | 11 | 6 | 542 | 18 | 601 | 0.0 | 639 |
Find 131 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCATATTAATAAATGTTT+AGG | 0.213341 | 8.3:-68619405 | MS.gene051007:CDS |
| TTAGTTGCTATTTGTGTTTC+CGG | 0.216242 | 8.3:-68619549 | MS.gene051007:CDS |
| TTTGCCTCAACCTTGTTATT+TGG | 0.238205 | 8.3:-68619298 | MS.gene051007:CDS |
| GAATGTAGAGGGAGGTGTTC+GGG | 0.272733 | 8.3:+68620070 | None:intergenic |
| ATTGATCCTGAATTCAATTT+CGG | 0.284521 | 8.3:-68619675 | MS.gene051007:CDS |
| GGCGATTCTGAACAGGGTTT+TGG | 0.289374 | 8.3:-68619478 | MS.gene051007:CDS |
| GAAGTTGGATGGGTTGGGTT+TGG | 0.289769 | 8.3:-68619259 | MS.gene051007:CDS |
| ATCATATTAATAAATGTTTA+GGG | 0.291964 | 8.3:-68619404 | MS.gene051007:CDS |
| AAGTTGGATGGGTTGGGTTT+GGG | 0.298746 | 8.3:-68619258 | MS.gene051007:CDS |
| TATTGAATGGAATCCTAAAA+AGG | 0.306443 | 8.3:-68619580 | MS.gene051007:CDS |
| GAATTTCCGAAATTGAATTC+AGG | 0.320671 | 8.3:+68619669 | None:intergenic |
| TTGTGGAGGGTTGGTGGATG+AGG | 0.325976 | 8.3:+68620096 | None:intergenic |
| TCTTCAATTAGCTTAGGGTT+AGG | 0.344093 | 8.3:+68619783 | None:intergenic |
| GAGGTAAATGGCGCGTAATT+CGG | 0.350363 | 8.3:+68619866 | None:intergenic |
| TGAGTAAACCTAAGGCTGTT+TGG | 0.356001 | 8.3:-68619233 | MS.gene051007:CDS |
| GTGAAGTAGCGGCGGAGATT+GGG | 0.366938 | 8.3:+68619933 | None:intergenic |
| TTCTTATGATGATGATGTTA+TGG | 0.367863 | 8.3:-68619151 | MS.gene051007:CDS |
| GAAAACTGTTCAGGATGTTA+TGG | 0.370308 | 8.3:-68619181 | MS.gene051007:CDS |
| GAGTAAACCTAAGGCTGTTT+GGG | 0.376187 | 8.3:-68619232 | MS.gene051007:CDS |
| CTTCAATTAGCTTAGGGTTA+GGG | 0.381882 | 8.3:+68619784 | None:intergenic |
| GGTGAAGTAGCGGCGGAGAT+TGG | 0.381999 | 8.3:+68619932 | None:intergenic |
| GGAAGAGAAGGAGGAGGAGA+AGG | 0.389816 | 8.3:+68619970 | None:intergenic |
| GCTGAGCAGTAAGCAAAATA+AGG | 0.389924 | 8.3:+68619028 | None:intergenic |
| TTGAAGAAGTTGGATGGGTT+GGG | 0.392285 | 8.3:-68619264 | MS.gene051007:CDS |
| CGATTTATTCAGACATTCCT+TGG | 0.392434 | 8.3:-68619006 | MS.gene051007:CDS |
| GAAATTCAAATTTCAATGTT+GGG | 0.393322 | 8.3:-68619653 | MS.gene051007:CDS |
| TCATCCTCCCAAACAGCCTT+AGG | 0.396707 | 8.3:+68619225 | None:intergenic |
| AAGATCTCAATTCCCGATTC+CGG | 0.397943 | 8.3:-68620040 | MS.gene051007:CDS |
| TCCGAAGAAGAAAACTGTTC+AGG | 0.400163 | 8.3:-68619190 | MS.gene051007:CDS |
| TTCAGATCTTCAATTAGCTT+AGG | 0.405765 | 8.3:+68619777 | None:intergenic |
| GGAAATTCAAATTTCAATGT+TGG | 0.407138 | 8.3:-68619654 | MS.gene051007:CDS |
| AGTCTGTTCCACTTGTAATT+CGG | 0.409574 | 8.3:-68618281 | MS.gene051007:CDS |
| GTAAGCAAAATAAGGCGATT+AGG | 0.416760 | 8.3:+68619036 | None:intergenic |
| GGAATGTAGAGGGAGGTGTT+CGG | 0.421929 | 8.3:+68620069 | None:intergenic |
| GTTGAAGAAGTTGGATGGGT+TGG | 0.422746 | 8.3:-68619265 | MS.gene051007:CDS |
| TTCTTTCATTCGATCGGAGA+TGG | 0.424663 | 8.3:+68619890 | None:intergenic |
| TGATGAGAGGTTGAAGAAGT+TGG | 0.429311 | 8.3:-68619274 | MS.gene051007:CDS |
| CTGTTGAATCCACATAGAAC+AGG | 0.430746 | 8.3:-68619705 | MS.gene051007:CDS |
| TCAGATCTTCAATTAGCTTA+GGG | 0.433199 | 8.3:+68619778 | None:intergenic |
| AGGGTTGGTGGATGAGGTTG+TGG | 0.433360 | 8.3:+68620102 | None:intergenic |
| TGATAATCAACTTTAGAACT+TGG | 0.433498 | 8.3:+68619450 | None:intergenic |
| TTGTTGGCGCAAGAGGTAAA+TGG | 0.433822 | 8.3:+68619854 | None:intergenic |
| TGAAATTGACGCGCCGGAAT+CGG | 0.434406 | 8.3:+68620027 | None:intergenic |
| AAGGAGGAGGAGAAGGAGAA+TGG | 0.435348 | 8.3:+68619977 | None:intergenic |
| AATGGGATGCTTTGTTGTAC+AGG | 0.436207 | 8.3:-68618236 | MS.gene051007:CDS |
| TTGAGAGACGTTGTTGTTGT+TGG | 0.437985 | 8.3:+68619838 | None:intergenic |
| CAATCTGCTGCTTGAGGGAT+GGG | 0.440779 | 8.3:+68618411 | None:intergenic |
| GATGATGATGTTATGGCAAT+TGG | 0.442339 | 8.3:-68619144 | MS.gene051007:CDS |
| GAAATTGACGCGCCGGAATC+GGG | 0.444155 | 8.3:+68620028 | None:intergenic |
| GATGCAGCTGAAAGTGAAAC+TGG | 0.457579 | 8.3:-68618336 | MS.gene051007:CDS |
| ATCCGTAGAAAGATATATGA+TGG | 0.464180 | 8.3:+68618356 | None:intergenic |
| TTGTACAGGCATCATATTGA+GGG | 0.469353 | 8.3:-68618222 | MS.gene051007:CDS |
| TTCGGATTCTTTCATTCGAT+CGG | 0.469561 | 8.3:+68619884 | None:intergenic |
| AGAAGAGGAAGAGAAGGAGG+AGG | 0.475110 | 8.3:+68619964 | None:intergenic |
| GCATGAATGGGTTATGCAAC+CGG | 0.476154 | 8.3:-68619097 | MS.gene051007:CDS |
| CTTGCGGCTGAGAAAGGACT+GGG | 0.485227 | 8.3:-68616851 | MS.gene051007:CDS |
| ATGCTGAAGTGGAGCATGAA+TGG | 0.486444 | 8.3:-68619110 | MS.gene051007:CDS |
| CTGAGAAGAAGAGGAAGAGA+AGG | 0.490020 | 8.3:+68619958 | None:intergenic |
| AGAAGAAGAGGAAGAGAAGG+AGG | 0.491803 | 8.3:+68619961 | None:intergenic |
| CAAGATGTCTTCAGTGAAAG+TGG | 0.493024 | 8.3:+68616870 | None:intergenic |
| ACTGAAGGTGGAAGCTATGT+TGG | 0.493826 | 8.3:-68616941 | MS.gene051007:intron |
| CACTTGTAATTCGGCCAGCT+CGG | 0.495746 | 8.3:-68618272 | MS.gene051007:CDS |
| CAAAGAGGAAAACTATTGAA+TGG | 0.498658 | 8.3:-68619593 | MS.gene051007:CDS |
| GTCTTGCATTGATGAGCAAT+CGG | 0.499882 | 8.3:+68619069 | None:intergenic |
| CAGTCACTGATCGTGCTGAA+TGG | 0.500810 | 8.3:-68618306 | MS.gene051007:CDS |
| AGCGTGTTCATTGGAGCACC+TGG | 0.501788 | 8.3:-68616895 | MS.gene051007:CDS |
| AGACATCTTGCGGCTGAGAA+AGG | 0.504340 | 8.3:-68616857 | MS.gene051007:CDS |
| ATTACATTCCCTGTTCTATG+TGG | 0.511766 | 8.3:+68619696 | None:intergenic |
| TGCTGAAGTGGAGCATGAAT+GGG | 0.512626 | 8.3:-68619109 | MS.gene051007:CDS |
| GTTGTTGTTGTTGGCGCAAG+AGG | 0.519086 | 8.3:+68619847 | None:intergenic |
| CATTCGATCGGAGATGGAGT+CGG | 0.521245 | 8.3:+68619896 | None:intergenic |
| TTGATCAGAGTTTGTCAAAG+AGG | 0.522693 | 8.3:-68619608 | MS.gene051007:CDS |
| CAAATGATTCGACATTTGAC+CGG | 0.524066 | 8.3:+68619530 | None:intergenic |
| TTATTCAGACATTCCTTGGA+AGG | 0.535294 | 8.3:-68619002 | MS.gene051007:CDS |
| AAGATGCAATCTGCTGCTTG+AGG | 0.535947 | 8.3:+68618405 | None:intergenic |
| GCAATCTGCTGCTTGAGGGA+TGG | 0.535959 | 8.3:+68618410 | None:intergenic |
| AGATGCAATCTGCTGCTTGA+GGG | 0.537297 | 8.3:+68618406 | None:intergenic |
| TTTCGCGGCGATTCTGAACA+GGG | 0.537645 | 8.3:-68619484 | MS.gene051007:CDS |
| AGCAGCAGATTGCATCTTGA+GGG | 0.538084 | 8.3:-68618400 | MS.gene051007:CDS |
| GTGGTGGTCGTCGTCTTCGT+CGG | 0.541192 | 8.3:+68620121 | None:intergenic |
| GTCGTCGTCTTCGTCGGAGG+AGG | 0.543349 | 8.3:+68620127 | None:intergenic |
| TCATATTGAGGGAGATTCAC+AGG | 0.543571 | 8.3:-68618211 | MS.gene051007:intron |
| CAATATTCGGTTCTTCACCT+TGG | 0.544512 | 8.3:+68616797 | None:intergenic |
| GTTGTACAGGCATCATATTG+AGG | 0.546833 | 8.3:-68618223 | MS.gene051007:CDS |
| TAAGGCTGTTTGGGAGGATG+AGG | 0.546866 | 8.3:-68619223 | MS.gene051007:CDS |
| CTCTCATCATCCAAATAACA+AGG | 0.547604 | 8.3:+68619288 | None:intergenic |
| ACCCATCATATATCTTTCTA+CGG | 0.548743 | 8.3:-68618358 | MS.gene051007:CDS |
| GATGGAGTCGGAGGTGAATG+AGG | 0.551470 | 8.3:+68619908 | None:intergenic |
| TCTTGCGGCTGAGAAAGGAC+TGG | 0.552823 | 8.3:-68616852 | MS.gene051007:CDS |
| AGAGGTTGAAGAAGTTGGAT+GGG | 0.564955 | 8.3:-68619269 | MS.gene051007:CDS |
| TGATGAGCAATCGGTCCACC+CGG | 0.566103 | 8.3:+68619078 | None:intergenic |
| CATGAATGGGTTATGCAACC+GGG | 0.566495 | 8.3:-68619096 | MS.gene051007:CDS |
| CTGATCGGAAGAGTTGAAAA+CGG | 0.566837 | 8.3:+68619815 | None:intergenic |
| GCCATGTCTAGCGTGTTCAT+TGG | 0.568070 | 8.3:-68616904 | MS.gene051007:CDS |
| AAGCAATGAAGTTCCTTCCA+AGG | 0.569377 | 8.3:+68618989 | None:intergenic |
| GAGAGGTTGAAGAAGTTGGA+TGG | 0.570927 | 8.3:-68619270 | MS.gene051007:CDS |
| GCATCTTGAGGGTGATTGAG+AGG | 0.572158 | 8.3:-68618389 | MS.gene051007:CDS |
| AATGTAGAGGGAGGTGTTCG+GGG | 0.572856 | 8.3:+68620071 | None:intergenic |
| AAGATATATGATGGGTGCAT+CGG | 0.573461 | 8.3:+68618365 | None:intergenic |
| GATTGGGGACTGAGAAGAAG+AGG | 0.575965 | 8.3:+68619949 | None:intergenic |
| TGAAGTAGCGGCGGAGATTG+GGG | 0.576892 | 8.3:+68619934 | None:intergenic |
| TCATCCAAATAACAAGGTTG+AGG | 0.580652 | 8.3:+68619294 | None:intergenic |
| TCTTCGACGTGGAATGTAGA+GGG | 0.580661 | 8.3:+68620059 | None:intergenic |
| AAGCAGCAGATTGCATCTTG+AGG | 0.583857 | 8.3:-68618401 | MS.gene051007:CDS |
| TTTGGGTATGAGTAAACCTA+AGG | 0.587132 | 8.3:-68619241 | MS.gene051007:CDS |
| CATCTTGAGGGTGATTGAGA+GGG | 0.588073 | 8.3:-68618388 | MS.gene051007:CDS |
| GGAAGGTGAAATTGACGCGC+CGG | 0.588929 | 8.3:+68620021 | None:intergenic |
| ATCTTCGACGTGGAATGTAG+AGG | 0.600566 | 8.3:+68620058 | None:intergenic |
| GTTGGTGGATGAGGTTGTGG+TGG | 0.603656 | 8.3:+68620105 | None:intergenic |
| TCCAATGAACACGCTAGACA+TGG | 0.603721 | 8.3:+68616903 | None:intergenic |
| TCTTCAGTGAAAGTGGAACC+AGG | 0.609539 | 8.3:+68616877 | None:intergenic |
| TAAACCTAAGGCTGTTTGGG+AGG | 0.614046 | 8.3:-68619229 | MS.gene051007:CDS |
| CTTGTTATTTGGATGATGAG+AGG | 0.615113 | 8.3:-68619287 | MS.gene051007:CDS |
| TCCGTAGAAAGATATATGAT+GGG | 0.622070 | 8.3:+68618357 | None:intergenic |
| CTTTCACTGAAGACATCTTG+CGG | 0.622202 | 8.3:-68616867 | MS.gene051007:CDS |
| GTGGTCGTCGTCTTCGTCGG+AGG | 0.625911 | 8.3:+68620124 | None:intergenic |
| CGAGCTGGCCGAATTACAAG+TGG | 0.629533 | 8.3:+68618273 | None:intergenic |
| TCGTCGGAGGAGGAATCCAT+TGG | 0.632241 | 8.3:+68620137 | None:intergenic |
| AATCTGCTGCTTGAGGGATG+GGG | 0.632784 | 8.3:+68618412 | None:intergenic |
| TGTGATGAGTATCTTTGCCA+AGG | 0.635336 | 8.3:-68616814 | MS.gene051007:CDS |
| TGAATGAGGTGGTGAAGTAG+CGG | 0.637393 | 8.3:+68619922 | None:intergenic |
| TCGATCGGAGATGGAGTCGG+AGG | 0.656256 | 8.3:+68619899 | None:intergenic |
| ATGAGGTGGTGAAGTAGCGG+CGG | 0.673475 | 8.3:+68619925 | None:intergenic |
| TGTTGAATCCACATAGAACA+GGG | 0.688035 | 8.3:-68619704 | MS.gene051007:CDS |
| TGAAGAACCGAATATTGTAG+CGG | 0.689587 | 8.3:-68616791 | MS.gene051007:CDS |
| GAATGGGTTATGCAACCGGG+TGG | 0.697233 | 8.3:-68619093 | MS.gene051007:CDS |
| GGAGTCGGAGGTGAATGAGG+TGG | 0.703315 | 8.3:+68619911 | None:intergenic |
| TCGACGTGGAATGTAGAGGG+AGG | 0.708402 | 8.3:+68620062 | None:intergenic |
| TTTGGGAGGATGAGGATACG+AGG | 0.712720 | 8.3:-68619215 | MS.gene051007:CDS |
| TTGCGGCTGAGAAAGGACTG+GGG | 0.724371 | 8.3:-68616850 | MS.gene051007:CDS |
| GGGAATTGAGATCTTCGACG+TGG | 0.734919 | 8.3:+68620048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATATTAATAAATGTTTA+GGG | - | chr8.3:68617510-68617529 | MS.gene051007:intron | 10.0% |
| !! | GATCATATTAATAAATGTTT+AGG | - | chr8.3:68617509-68617528 | MS.gene051007:intron | 15.0% |
| !! | TTAATTTCTCATAAGATTAT+GGG | - | chr8.3:68618008-68618027 | MS.gene051007:intron | 15.0% |
| !!! | AATCAGTATTTTGTAAATAA+AGG | + | chr8.3:68618933-68618952 | None:intergenic | 15.0% |
| !!! | ACTAAAAATTTATCCTTTTT+AGG | + | chr8.3:68617350-68617369 | None:intergenic | 15.0% |
| !!! | TTTAATTTCTCATAAGATTA+TGG | - | chr8.3:68618007-68618026 | MS.gene051007:intron | 15.0% |
| !! | ATTTACAAATGAAAGTTTCA+TGG | - | chr8.3:68618824-68618843 | MS.gene051007:intron | 20.0% |
| !! | GAAATTCAAATTTCAATGTT+GGG | - | chr8.3:68617261-68617280 | MS.gene051007:intron | 20.0% |
| !! | TAATTTCTCATAAGATTATG+GGG | - | chr8.3:68618009-68618028 | MS.gene051007:intron | 20.0% |
| !! | TACTCTCTTTCAATTTATTT+CGG | - | chr8.3:68619925-68619944 | MS.gene051007:CDS | 20.0% |
| !! | TTTACAAATGAAAGTTTCAT+GGG | - | chr8.3:68618825-68618844 | MS.gene051007:intron | 20.0% |
| !! | TTTCATAGTGGTTTAAAAAT+TGG | + | chr8.3:68619833-68619852 | None:intergenic | 20.0% |
| !!! | GAATTTTTGAATGTTAAGAA+GGG | - | chr8.3:68617557-68617576 | MS.gene051007:intron | 20.0% |
| !!! | TGAATTTTTGAATGTTAAGA+AGG | - | chr8.3:68617556-68617575 | MS.gene051007:intron | 20.0% |
| ! | AACATGAAAATGGATAAGTA+AGG | + | chr8.3:68618450-68618469 | None:intergenic | 25.0% |
| ! | AATTTCTCATAAGATTATGG+GGG | - | chr8.3:68618010-68618029 | MS.gene051007:intron | 25.0% |
| ! | ACTAAGCTTCAAACTTAAAA+GGG | + | chr8.3:68619133-68619152 | None:intergenic | 25.0% |
| ! | AGTCAACAACTTAAAATCTT+TGG | + | chr8.3:68618197-68618216 | None:intergenic | 25.0% |
| ! | ATATCAAACCAAATTTAGCA+GGG | + | chr8.3:68619634-68619653 | None:intergenic | 25.0% |
| ! | ATTCATTATGTGTCTATTCT+AGG | - | chr8.3:68618898-68618917 | MS.gene051007:intron | 25.0% |
| ! | ATTGATCCTGAATTCAATTT+CGG | - | chr8.3:68617239-68617258 | MS.gene051007:intron | 25.0% |
| ! | CACATGAAAAAAAATAAGCA+AGG | + | chr8.3:68618741-68618760 | None:intergenic | 25.0% |
| ! | GAATTTATTGTTGTAAGTTC+TGG | - | chr8.3:68619073-68619092 | MS.gene051007:CDS | 25.0% |
| ! | GGAAATTCAAATTTCAATGT+TGG | - | chr8.3:68617260-68617279 | MS.gene051007:intron | 25.0% |
| ! | TAAACCAGAAAAAGGAATAA+AGG | + | chr8.3:68617991-68618010 | None:intergenic | 25.0% |
| ! | TACTAAGCTTCAAACTTAAA+AGG | + | chr8.3:68619134-68619153 | None:intergenic | 25.0% |
| ! | TATGAGCCTACAAAAAAAAT+CGG | + | chr8.3:68619667-68619686 | None:intergenic | 25.0% |
| ! | TATTGAATGGAATCCTAAAA+AGG | - | chr8.3:68617334-68617353 | MS.gene051007:intron | 25.0% |
| ! | TGACATAGTGGTTTAAAAAT+TGG | + | chr8.3:68619865-68619884 | None:intergenic | 25.0% |
| ! | TGAGAAATTAAACCAGAAAA+AGG | + | chr8.3:68617999-68618018 | None:intergenic | 25.0% |
| ! | TTAAACTTAAATAGTGTACC+TGG | - | chr8.3:68618763-68618782 | MS.gene051007:intron | 25.0% |
| ! | TTTGTAAATTGTAACAGAAG+AGG | + | chr8.3:68618990-68619009 | None:intergenic | 25.0% |
| !! | TATGAATATTTTCACACTGA+AGG | - | chr8.3:68619958-68619977 | MS.gene051007:CDS | 25.0% |
| !! | TGTTATAACATTTTACTGTC+AGG | - | chr8.3:68619186-68619205 | MS.gene051007:CDS | 25.0% |
| !! | TTCTTATGATGATGATGTTA+TGG | - | chr8.3:68617763-68617782 | MS.gene051007:intron | 25.0% |
| !!! | AGTTGTTTTGTTTCATTTCA+TGG | - | chr8.3:68618312-68618331 | MS.gene051007:CDS | 25.0% |
| !!! | GTGTTTACAAGTTGTTATTT+TGG | + | chr8.3:68619517-68619536 | None:intergenic | 25.0% |
| !!! | TGATAATCAACTTTAGAACT+TGG | + | chr8.3:68617467-68617486 | None:intergenic | 25.0% |
| AAAAGTTATGCATGCATGTA+AGG | - | chr8.3:68618362-68618381 | MS.gene051007:CDS | 30.0% | |
| AATAAATTCAAGCGAAAACC+AGG | + | chr8.3:68619062-68619081 | None:intergenic | 30.0% | |
| AATGGATAAGTAAGGCAATA+TGG | + | chr8.3:68618442-68618461 | None:intergenic | 30.0% | |
| ACATCAAATTGTTGACATAG+TGG | + | chr8.3:68619877-68619896 | None:intergenic | 30.0% | |
| ACCCATCATATATCTTTCTA+CGG | - | chr8.3:68618556-68618575 | MS.gene051007:intron | 30.0% | |
| AGATACTTAAACTTATTCCC+GGG | + | chr8.3:68619298-68619317 | None:intergenic | 30.0% | |
| ATAAATTCAAGCGAAAACCA+GGG | + | chr8.3:68619061-68619080 | None:intergenic | 30.0% | |
| ATCCGTAGAAAGATATATGA+TGG | + | chr8.3:68618561-68618580 | None:intergenic | 30.0% | |
| CAAAGAGGAAAACTATTGAA+TGG | - | chr8.3:68617321-68617340 | MS.gene051007:intron | 30.0% | |
| CAGATACTTAAACTTATTCC+CGG | + | chr8.3:68619299-68619318 | None:intergenic | 30.0% | |
| CATATCAAACCAAATTTAGC+AGG | + | chr8.3:68619635-68619654 | None:intergenic | 30.0% | |
| CATTACTGCAAACATGAAAA+TGG | + | chr8.3:68618460-68618479 | None:intergenic | 30.0% | |
| GAATTTCCGAAATTGAATTC+AGG | + | chr8.3:68617248-68617267 | None:intergenic | 30.0% | |
| GTTAGTTAGTAGAAGTTAGT+TGG | + | chr8.3:68619563-68619582 | None:intergenic | 30.0% | |
| TAGCAAACTTGAAATCAAAG+CGG | - | chr8.3:68618159-68618178 | MS.gene051007:intron | 30.0% | |
| TCCGTAGAAAGATATATGAT+GGG | + | chr8.3:68618560-68618579 | None:intergenic | 30.0% | |
| TTAATCTAACGCATAGATTC+AGG | + | chr8.3:68618081-68618100 | None:intergenic | 30.0% | |
| TTTGTCAGTAGAGAATTATC+TGG | + | chr8.3:68619430-68619449 | None:intergenic | 30.0% | |
| ! | AACATTTTACTGTCAGGAAA+AGG | - | chr8.3:68619192-68619211 | MS.gene051007:CDS | 30.0% |
| ! | ACTACCTTTATTCCTTTTTC+TGG | - | chr8.3:68617984-68618003 | MS.gene051007:intron | 30.0% |
| ! | ACTTCATTGCTTTGCATTTT+CGG | - | chr8.3:68617936-68617955 | MS.gene051007:intron | 30.0% |
| ! | TCAGATCTTCAATTAGCTTA+GGG | + | chr8.3:68617139-68617158 | None:intergenic | 30.0% |
| ! | TCATTTTCCGCTACAATATT+CGG | + | chr8.3:68620133-68620152 | None:intergenic | 30.0% |
| ! | TGCTATTAAAGCTGATTCAA+CGG | + | chr8.3:68618144-68618163 | None:intergenic | 30.0% |
| ! | TTCAGATCTTCAATTAGCTT+AGG | + | chr8.3:68617140-68617159 | None:intergenic | 30.0% |
| ! | TTTTGTAGGCTCATAATGAA+AGG | - | chr8.3:68619672-68619691 | MS.gene051007:CDS | 30.0% |
| !! | AGAAAAGCATATGTTTTTCG+CGG | - | chr8.3:68617415-68617434 | MS.gene051007:intron | 30.0% |
| !! | CTGCTAAATTTGGTTTGATA+TGG | - | chr8.3:68619633-68619652 | MS.gene051007:CDS | 30.0% |
| !! | TTAGTTGCTATTTGTGTTTC+CGG | - | chr8.3:68617365-68617384 | MS.gene051007:intron | 30.0% |
| !!! | AATGTAGTGCTTTTTTTGGA+AGG | + | chr8.3:68616913-68616932 | None:intergenic | 30.0% |
| !!! | GACACGGTTTTTTGAAATTT+TGG | - | chr8.3:68617960-68617979 | MS.gene051007:intron | 30.0% |
| !!! | GTGTAGAATTTTTTACTGCA+GGG | - | chr8.3:68618225-68618244 | MS.gene051007:CDS | 30.0% |
| !!! | TAGTCACCGATTTTTTTTGT+AGG | - | chr8.3:68619658-68619677 | MS.gene051007:CDS | 30.0% |
| !!! | TGATGTTTTTTATGCTGAAG+TGG | - | chr8.3:68617793-68617812 | MS.gene051007:intron | 30.0% |
| !!! | TGTGTAGAATTTTTTACTGC+AGG | - | chr8.3:68618224-68618243 | MS.gene051007:CDS | 30.0% |
| AAACCACTATGAAAGCTGAT+TGG | - | chr8.3:68619839-68619858 | MS.gene051007:CDS | 35.0% | |
| AAGTAAGGCAATATGGTAGA+GGG | + | chr8.3:68618435-68618454 | None:intergenic | 35.0% | |
| AATTTAGCAGGGATTCTGTA+AGG | + | chr8.3:68619623-68619642 | None:intergenic | 35.0% | |
| AGTCTGTTCCACTTGTAATT+CGG | - | chr8.3:68618633-68618652 | MS.gene051007:intron | 35.0% | |
| ATTACATTCCCTGTTCTATG+TGG | + | chr8.3:68617221-68617240 | None:intergenic | 35.0% | |
| CAAATGATTCGACATTTGAC+CGG | + | chr8.3:68617387-68617406 | None:intergenic | 35.0% | |
| CGATTTATTCAGACATTCCT+TGG | - | chr8.3:68617908-68617927 | MS.gene051007:intron | 35.0% | |
| CTCTCATCATCCAAATAACA+AGG | + | chr8.3:68617629-68617648 | None:intergenic | 35.0% | |
| CTTGCATATGTAGTCAAGAT+CGG | - | chr8.3:68618111-68618130 | MS.gene051007:intron | 35.0% | |
| CTTTGTGTAATTCCCCAAAA+CGG | - | chr8.3:68619331-68619350 | MS.gene051007:CDS | 35.0% | |
| GAAAACTGTTCAGGATGTTA+TGG | - | chr8.3:68617733-68617752 | MS.gene051007:intron | 35.0% | |
| GTAAGCAAAATAAGGCGATT+AGG | + | chr8.3:68617881-68617900 | None:intergenic | 35.0% | |
| GTAATCCTAATGATCAGCTT+TGG | + | chr8.3:68618803-68618822 | None:intergenic | 35.0% | |
| GTCTTTAAATATCCCTCGAA+TGG | + | chr8.3:68619484-68619503 | None:intergenic | 35.0% | |
| GTTGGCACTTCATTCAAATT+CGG | + | chr8.3:68618253-68618272 | None:intergenic | 35.0% | |
| TAAATTCAAGCGAAAACCAG+GGG | + | chr8.3:68619060-68619079 | None:intergenic | 35.0% | |
| TAAGTAAGGCAATATGGTAG+AGG | + | chr8.3:68618436-68618455 | None:intergenic | 35.0% | |
| TACAGAATCCCTGCTAAATT+TGG | - | chr8.3:68619623-68619642 | MS.gene051007:CDS | 35.0% | |
| TCATCCAAATAACAAGGTTG+AGG | + | chr8.3:68617623-68617642 | None:intergenic | 35.0% | |
| TCGGAATTCAGCAGAAAAAT+GGG | - | chr8.3:68618661-68618680 | MS.gene051007:intron | 35.0% | |
| TGAAAGTTTCATGGGTAACT+TGG | - | chr8.3:68618833-68618852 | MS.gene051007:intron | 35.0% | |
| TGAAGAACCGAATATTGTAG+CGG | - | chr8.3:68620123-68620142 | MS.gene051007:CDS | 35.0% | |
| TGTTGAATCCACATAGAACA+GGG | - | chr8.3:68617210-68617229 | MS.gene051007:intron | 35.0% | |
| TTATTCAGACATTCCTTGGA+AGG | - | chr8.3:68617912-68617931 | MS.gene051007:intron | 35.0% | |
| TTCAAGGCTTAGACAACTAA+AGG | + | chr8.3:68619259-68619278 | None:intergenic | 35.0% | |
| TTCGGATTCTTTCATTCGAT+CGG | + | chr8.3:68617033-68617052 | None:intergenic | 35.0% | |
| TTGATCAGAGTTTGTCAAAG+AGG | - | chr8.3:68617306-68617325 | MS.gene051007:intron | 35.0% | |
| TTGTACAGGCATCATATTGA+GGG | - | chr8.3:68618692-68618711 | MS.gene051007:intron | 35.0% | |
| TTTGGGTATGAGTAAACCTA+AGG | - | chr8.3:68617673-68617692 | MS.gene051007:intron | 35.0% | |
| TTTGTGTAATTCCCCAAAAC+GGG | - | chr8.3:68619332-68619351 | MS.gene051007:CDS | 35.0% | |
| ! | AAAATTTTCAGAGAGAGGGA+AGG | + | chr8.3:68619781-68619800 | None:intergenic | 35.0% |
| ! | AACTTAAAAGGGCCTTTTCA+AGG | + | chr8.3:68619122-68619141 | None:intergenic | 35.0% |
| ! | ACTCAATTCTATCCCGTTTT+GGG | + | chr8.3:68619347-68619366 | None:intergenic | 35.0% |
| ! | ACTTAAAAGGGCCTTTTCAA+GGG | + | chr8.3:68619121-68619140 | None:intergenic | 35.0% |
| ! | CGCAAAAATTTTCAGAGAGA+GGG | + | chr8.3:68619785-68619804 | None:intergenic | 35.0% |
| ! | CTTCAATTAGCTTAGGGTTA+GGG | + | chr8.3:68617133-68617152 | None:intergenic | 35.0% |
| ! | GAATATTTTCACACTGAAGG+TGG | - | chr8.3:68619961-68619980 | MS.gene051007:CDS | 35.0% |
| ! | GATGATGATGTTATGGCAAT+TGG | - | chr8.3:68617770-68617789 | MS.gene051007:intron | 35.0% |
| ! | GGAAACAAGTTGAATACCAT+AGG | + | chr8.3:68619238-68619257 | None:intergenic | 35.0% |
| ! | TACTCAATTCTATCCCGTTT+TGG | + | chr8.3:68619348-68619367 | None:intergenic | 35.0% |
| ! | TCCTGAACAGTTTTCTTCTT+CGG | + | chr8.3:68617728-68617747 | None:intergenic | 35.0% |
| ! | TCTTCAATTAGCTTAGGGTT+AGG | + | chr8.3:68617134-68617153 | None:intergenic | 35.0% |
| !! | AAAGAGAGCACTAAAATTGC+AGG | + | chr8.3:68618410-68618429 | None:intergenic | 35.0% |
| !! | AAGATATATGATGGGTGCAT+CGG | + | chr8.3:68618552-68618571 | None:intergenic | 35.0% |
| !! | CTTGTTATTTGGATGATGAG+AGG | - | chr8.3:68617627-68617646 | MS.gene051007:intron | 35.0% |
| !! | TTCAACGCTTCTCTAAGATA+TGG | + | chr8.3:68618879-68618898 | None:intergenic | 35.0% |
| !! | TTTGCCTCAACCTTGTTATT+TGG | - | chr8.3:68617616-68617635 | MS.gene051007:intron | 35.0% |
| !!! | CGAGAATGTAGTGCTTTTTT+TGG | + | chr8.3:68616917-68616936 | None:intergenic | 35.0% |
| !!! | GTTAGGGTTTTGATTCTGAT+CGG | + | chr8.3:68617117-68617136 | None:intergenic | 35.0% |
| AAATATCCCTCGAATGGTAG+AGG | + | chr8.3:68619478-68619497 | None:intergenic | 40.0% | |
| AAGATCTCAATTCCCGATTC+CGG | - | chr8.3:68616874-68616893 | MS.gene051007:CDS | 40.0% | |
| AAGCAATGAAGTTCCTTCCA+AGG | + | chr8.3:68617928-68617947 | None:intergenic | 40.0% | |
| AAGGAAACTTTCAGAGCTGT+AGG | - | chr8.3:68619211-68619230 | MS.gene051007:CDS | 40.0% | |
| AATATCCCTCGAATGGTAGA+GGG | + | chr8.3:68619477-68619496 | None:intergenic | 40.0% | |
| ACCATCCAAAGCTGATCATT+AGG | - | chr8.3:68618795-68618814 | MS.gene051007:intron | 40.0% | |
| AGAGAATTATCTGGCGTGAA+AGG | + | chr8.3:68619421-68619440 | None:intergenic | 40.0% | |
| AGAGGTTGAAGAAGTTGGAT+GGG | - | chr8.3:68617645-68617664 | MS.gene051007:intron | 40.0% | |
| AGATGATAACCTTCCACACA+AGG | - | chr8.3:68619375-68619394 | MS.gene051007:CDS | 40.0% | |
| CAAGATGTCTTCAGTGAAAG+TGG | + | chr8.3:68620047-68620066 | None:intergenic | 40.0% | |
| CAATATTCGGTTCTTCACCT+TGG | + | chr8.3:68620120-68620139 | None:intergenic | 40.0% | |
| CGATCTTGACTACATATGCA+AGG | + | chr8.3:68618113-68618132 | None:intergenic | 40.0% | |
| CTCGGAATTCAGCAGAAAAA+TGG | - | chr8.3:68618660-68618679 | MS.gene051007:intron | 40.0% | |
| CTGATCGGAAGAGTTGAAAA+CGG | + | chr8.3:68617102-68617121 | None:intergenic | 40.0% | |
| CTGTTGAATCCACATAGAAC+AGG | - | chr8.3:68617209-68617228 | MS.gene051007:intron | 40.0% | |
| CTTTCACTGAAGACATCTTG+CGG | - | chr8.3:68620047-68620066 | MS.gene051007:CDS | 40.0% | |
| GAGTAAACCTAAGGCTGTTT+GGG | - | chr8.3:68617682-68617701 | MS.gene051007:intron | 40.0% | |
| GCTGAGCAGTAAGCAAAATA+AGG | + | chr8.3:68617889-68617908 | None:intergenic | 40.0% | |
| GTTGTACAGGCATCATATTG+AGG | - | chr8.3:68618691-68618710 | MS.gene051007:intron | 40.0% | |
| TAGTTGTCTAAGCCTTGAAG+CGG | - | chr8.3:68619260-68619279 | MS.gene051007:CDS | 40.0% | |
| TCATATTGAGGGAGATTCAC+AGG | - | chr8.3:68618703-68618722 | MS.gene051007:intron | 40.0% | |
| TCCGAAGAAGAAAACTGTTC+AGG | - | chr8.3:68617724-68617743 | MS.gene051007:intron | 40.0% | |
| TGAGTAAACCTAAGGCTGTT+TGG | - | chr8.3:68617681-68617700 | MS.gene051007:intron | 40.0% | |
| TGATGAGAGGTTGAAGAAGT+TGG | - | chr8.3:68617640-68617659 | MS.gene051007:intron | 40.0% | |
| TGTGATGAGTATCTTTGCCA+AGG | - | chr8.3:68620100-68620119 | MS.gene051007:CDS | 40.0% | |
| TTCTTTCATTCGATCGGAGA+TGG | + | chr8.3:68617027-68617046 | None:intergenic | 40.0% | |
| TTTCCATGGCTCATGAGTTA+TGG | - | chr8.3:68618277-68618296 | MS.gene051007:CDS | 40.0% | |
| ! | AATGGGATGCTTTGTTGTAC+AGG | - | chr8.3:68618678-68618697 | MS.gene051007:intron | 40.0% |
| ! | CTCAATTCTATCCCGTTTTG+GGG | + | chr8.3:68619346-68619365 | None:intergenic | 40.0% |
| ! | GCGCAAAAATTTTCAGAGAG+AGG | + | chr8.3:68619786-68619805 | None:intergenic | 40.0% |
| ! | GTCTTGCATTGATGAGCAAT+CGG | + | chr8.3:68617848-68617867 | None:intergenic | 40.0% |
| ! | TTGAAGAAGTTGGATGGGTT+GGG | - | chr8.3:68617650-68617669 | MS.gene051007:intron | 40.0% |
| ! | TTGAGAGACGTTGTTGTTGT+TGG | + | chr8.3:68617079-68617098 | None:intergenic | 40.0% |
| !! | CAGCTTTGGATGGTGAATTT+AGG | + | chr8.3:68618789-68618808 | None:intergenic | 40.0% |
| !! | CTTAAAAGGGCCTTTTCAAG+GGG | + | chr8.3:68619120-68619139 | None:intergenic | 40.0% |
| !! | TCCTAATGATCAGCTTTGGA+TGG | + | chr8.3:68618799-68618818 | None:intergenic | 40.0% |
| AAGCAGCAGATTGCATCTTG+AGG | - | chr8.3:68618513-68618532 | MS.gene051007:intron | 45.0% | |
| AAGTGCCAACTGCATTTCCA+TGG | - | chr8.3:68618263-68618282 | MS.gene051007:CDS | 45.0% | |
| ACTGAAGGTGGAAGCTATGT+TGG | - | chr8.3:68619973-68619992 | MS.gene051007:CDS | 45.0% | |
| AGAAGAAGAGGAAGAGAAGG+AGG | + | chr8.3:68616956-68616975 | None:intergenic | 45.0% | |
| AGCAGCAGATTGCATCTTGA+GGG | - | chr8.3:68618514-68618533 | MS.gene051007:intron | 45.0% | |
| AGTTGTCTAAGCCTTGAAGC+GGG | - | chr8.3:68619261-68619280 | MS.gene051007:CDS | 45.0% | |
| ATATCCCTCGAATGGTAGAG+GGG | + | chr8.3:68619476-68619495 | None:intergenic | 45.0% | |
| ATCTTCGACGTGGAATGTAG+AGG | + | chr8.3:68616859-68616878 | None:intergenic | 45.0% | |
| ATGAGCCATGGAAATGCAGT+TGG | + | chr8.3:68618271-68618290 | None:intergenic | 45.0% | |
| ATGCTGAAGTGGAGCATGAA+TGG | - | chr8.3:68617804-68617823 | MS.gene051007:intron | 45.0% | |
| CATCTTGAGGGTGATTGAGA+GGG | - | chr8.3:68618526-68618545 | MS.gene051007:intron | 45.0% | |
| CTGAGAAGAAGAGGAAGAGA+AGG | + | chr8.3:68616959-68616978 | None:intergenic | 45.0% | |
| GAGAGGTTGAAGAAGTTGGA+TGG | - | chr8.3:68617644-68617663 | MS.gene051007:intron | 45.0% | |
| GAGGTAAATGGCGCGTAATT+CGG | + | chr8.3:68617051-68617070 | None:intergenic | 45.0% | |
| GATGCAGCTGAAAGTGAAAC+TGG | - | chr8.3:68618578-68618597 | MS.gene051007:intron | 45.0% | |
| GTTGAAGAAGTTGGATGGGT+TGG | - | chr8.3:68617649-68617668 | MS.gene051007:intron | 45.0% | |
| TAAACCTAAGGCTGTTTGGG+AGG | - | chr8.3:68617685-68617704 | MS.gene051007:intron | 45.0% | |
| TAGCCATAACTCATGAGCCA+TGG | + | chr8.3:68618283-68618302 | None:intergenic | 45.0% | |
| TCCAATGAACACGCTAGACA+TGG | + | chr8.3:68620014-68620033 | None:intergenic | 45.0% | |
| TCTTCAGTGAAAGTGGAACC+AGG | + | chr8.3:68620040-68620059 | None:intergenic | 45.0% | |
| TCTTCGACGTGGAATGTAGA+GGG | + | chr8.3:68616858-68616877 | None:intergenic | 45.0% | |
| TGAATGAGGTGGTGAAGTAG+CGG | + | chr8.3:68616995-68617014 | None:intergenic | 45.0% | |
| TGCTGAAGTGGAGCATGAAT+GGG | - | chr8.3:68617805-68617824 | MS.gene051007:intron | 45.0% | |
| TGGCCAATCAGCTTTCATAG+TGG | + | chr8.3:68619845-68619864 | None:intergenic | 45.0% | |
| TTGGATGGTGAATTTAGGCC+AGG | + | chr8.3:68618784-68618803 | None:intergenic | 45.0% | |
| TTGTTGGCGCAAGAGGTAAA+TGG | + | chr8.3:68617063-68617082 | None:intergenic | 45.0% | |
| TTTCAGAGCTGTAGGTCCTA+TGG | - | chr8.3:68619219-68619238 | MS.gene051007:CDS | 45.0% | |
| ! | AAGATGCAATCTGCTGCTTG+AGG | + | chr8.3:68618512-68618531 | None:intergenic | 45.0% |
| ! | AGATGCAATCTGCTGCTTGA+GGG | + | chr8.3:68618511-68618530 | None:intergenic | 45.0% |
| ! | GCTTTGCATTTTCGGAGACA+CGG | - | chr8.3:68617944-68617963 | MS.gene051007:intron | 45.0% |
| ! | TTTTCTGCTGAATTCCGAGC+TGG | + | chr8.3:68618659-68618678 | None:intergenic | 45.0% |
| !! | AAGTTGGATGGGTTGGGTTT+GGG | - | chr8.3:68617656-68617675 | MS.gene051007:intron | 45.0% |
| !! | ACAACTGTTGATAATGCCCC+TGG | - | chr8.3:68619041-68619060 | MS.gene051007:CDS | 45.0% |
| !! | CATGAATGGGTTATGCAACC+GGG | - | chr8.3:68617818-68617837 | MS.gene051007:intron | 45.0% |
| !! | CCTTTTCAAGGGGAAAAAGG+GGG | + | chr8.3:68619110-68619129 | None:intergenic | 45.0% |
| !! | GCATGAATGGGTTATGCAAC+CGG | - | chr8.3:68617817-68617836 | MS.gene051007:intron | 45.0% |
| !! | GCCTTTTCAAGGGGAAAAAG+GGG | + | chr8.3:68619111-68619130 | None:intergenic | 45.0% |
| !! | GGCCTTTTCAAGGGGAAAAA+GGG | + | chr8.3:68619112-68619131 | None:intergenic | 45.0% |
| !! | TGAAAGGAGAGTGCTCCTTT+GGG | + | chr8.3:68619405-68619424 | None:intergenic | 45.0% |
| AAGCTTGTGACCTTGCGCTA+AGG | - | chr8.3:68618962-68618981 | MS.gene051007:CDS | 50.0% | |
| AAGGAGGAGGAGAAGGAGAA+TGG | + | chr8.3:68616940-68616959 | None:intergenic | 50.0% | |
| AGAAGAGGAAGAGAAGGAGG+AGG | + | chr8.3:68616953-68616972 | None:intergenic | 50.0% | |
| AGACATCTTGCGGCTGAGAA+AGG | - | chr8.3:68620057-68620076 | MS.gene051007:CDS | 50.0% | |
| ATCTTCCCCTCTACCATTCG+AGG | - | chr8.3:68619468-68619487 | MS.gene051007:CDS | 50.0% | |
| CACTTGTAATTCGGCCAGCT+CGG | - | chr8.3:68618642-68618661 | MS.gene051007:intron | 50.0% | |
| CAGTCACTGATCGTGCTGAA+TGG | - | chr8.3:68618608-68618627 | MS.gene051007:intron | 50.0% | |
| CATTCGATCGGAGATGGAGT+CGG | + | chr8.3:68617021-68617040 | None:intergenic | 50.0% | |
| GATTGGGGACTGAGAAGAAG+AGG | + | chr8.3:68616968-68616987 | None:intergenic | 50.0% | |
| GCATCTTGAGGGTGATTGAG+AGG | - | chr8.3:68618525-68618544 | MS.gene051007:intron | 50.0% | |
| GCCATGTCTAGCGTGTTCAT+TGG | - | chr8.3:68620010-68620029 | MS.gene051007:CDS | 50.0% | |
| GGGAATTGAGATCTTCGACG+TGG | + | chr8.3:68616869-68616888 | None:intergenic | 50.0% | |
| GGGATGGGGAAAAAGCAACT+TGG | + | chr8.3:68618491-68618510 | None:intergenic | 50.0% | |
| TAAGGCTGTTTGGGAGGATG+AGG | - | chr8.3:68617691-68617710 | MS.gene051007:intron | 50.0% | |
| TCATCCTCCCAAACAGCCTT+AGG | + | chr8.3:68617692-68617711 | None:intergenic | 50.0% | |
| TCTAAGCCTTGAAGCGGGAT+TGG | - | chr8.3:68619266-68619285 | MS.gene051007:CDS | 50.0% | |
| TCTTCCCCTCTACCATTCGA+GGG | - | chr8.3:68619469-68619488 | MS.gene051007:CDS | 50.0% | |
| TGAAATTGACGCGCCGGAAT+CGG | + | chr8.3:68616890-68616909 | None:intergenic | 50.0% | |
| TTTCGCGGCGATTCTGAACA+GGG | - | chr8.3:68617430-68617449 | MS.gene051007:intron | 50.0% | |
| TTTGGGAGGATGAGGATACG+AGG | - | chr8.3:68617699-68617718 | MS.gene051007:intron | 50.0% | |
| ! | AATCTGCTGCTTGAGGGATG+GGG | + | chr8.3:68618505-68618524 | None:intergenic | 50.0% |
| ! | CAATCTGCTGCTTGAGGGAT+GGG | + | chr8.3:68618506-68618525 | None:intergenic | 50.0% |
| ! | CCCCCTTTTTCCCCTTGAAA+AGG | - | chr8.3:68619107-68619126 | MS.gene051007:CDS | 50.0% |
| ! | GGCGATTCTGAACAGGGTTT+TGG | - | chr8.3:68617436-68617455 | MS.gene051007:intron | 50.0% |
| ! | GTTGTTGTTGTTGGCGCAAG+AGG | + | chr8.3:68617070-68617089 | None:intergenic | 50.0% |
| ! | TTTTCGCGGCGATTCTGAAC+AGG | - | chr8.3:68617429-68617448 | MS.gene051007:intron | 50.0% |
| !! | AATGTAGAGGGAGGTGTTCG+GGG | + | chr8.3:68616846-68616865 | None:intergenic | 50.0% |
| !! | GAAAGGAGAGTGCTCCTTTG+GGG | + | chr8.3:68619404-68619423 | None:intergenic | 50.0% |
| !! | GAAGTTGGATGGGTTGGGTT+TGG | - | chr8.3:68617655-68617674 | MS.gene051007:intron | 50.0% |
| !! | GAATGTAGAGGGAGGTGTTC+GGG | + | chr8.3:68616847-68616866 | None:intergenic | 50.0% |
| !! | GGAATGTAGAGGGAGGTGTT+CGG | + | chr8.3:68616848-68616867 | None:intergenic | 50.0% |
| !! | GGGCCTTTTCAAGGGGAAAA+AGG | + | chr8.3:68619113-68619132 | None:intergenic | 50.0% |
| !! | GTGAAAGGAGAGTGCTCCTT+TGG | + | chr8.3:68619406-68619425 | None:intergenic | 50.0% |
| AGAAGAGGAGCCTTAGCGCA+AGG | + | chr8.3:68618975-68618994 | None:intergenic | 55.0% | |
| ATGAGGTGGTGAAGTAGCGG+CGG | + | chr8.3:68616992-68617011 | None:intergenic | 55.0% | |
| CGAGCTGGCCGAATTACAAG+TGG | + | chr8.3:68618644-68618663 | None:intergenic | 55.0% | |
| CTGAAGCCAATCCCGCTTCA+AGG | + | chr8.3:68619275-68619294 | None:intergenic | 55.0% | |
| CTTGCGGCTGAGAAAGGACT+GGG | - | chr8.3:68620063-68620082 | MS.gene051007:CDS | 55.0% | |
| GAAATTGACGCGCCGGAATC+GGG | + | chr8.3:68616889-68616908 | None:intergenic | 55.0% | |
| GATGGAGTCGGAGGTGAATG+AGG | + | chr8.3:68617009-68617028 | None:intergenic | 55.0% | |
| GGAAGAGAAGGAGGAGGAGA+AGG | + | chr8.3:68616947-68616966 | None:intergenic | 55.0% | |
| GGAAGGTGAAATTGACGCGC+CGG | + | chr8.3:68616896-68616915 | None:intergenic | 55.0% | |
| GTGAAGTAGCGGCGGAGATT+GGG | + | chr8.3:68616984-68617003 | None:intergenic | 55.0% | |
| TCCACACAAGGCTACCCCAA+AGG | - | chr8.3:68619387-68619406 | MS.gene051007:CDS | 55.0% | |
| TCGACGTGGAATGTAGAGGG+AGG | + | chr8.3:68616855-68616874 | None:intergenic | 55.0% | |
| TCTTGCGGCTGAGAAAGGAC+TGG | - | chr8.3:68620062-68620081 | MS.gene051007:CDS | 55.0% | |
| TGAAGTAGCGGCGGAGATTG+GGG | + | chr8.3:68616983-68617002 | None:intergenic | 55.0% | |
| TGATGAGCAATCGGTCCACC+CGG | + | chr8.3:68617839-68617858 | None:intergenic | 55.0% | |
| TTGCGGCTGAGAAAGGACTG+GGG | - | chr8.3:68620064-68620083 | MS.gene051007:CDS | 55.0% | |
| ! | AGCGTGTTCATTGGAGCACC+TGG | - | chr8.3:68620019-68620038 | MS.gene051007:CDS | 55.0% |
| ! | GCAATCTGCTGCTTGAGGGA+TGG | + | chr8.3:68618507-68618526 | None:intergenic | 55.0% |
| ! | GTTGGTGGATGAGGTTGTGG+TGG | + | chr8.3:68616812-68616831 | None:intergenic | 55.0% |
| !! | AGGGTTGGTGGATGAGGTTG+TGG | + | chr8.3:68616815-68616834 | None:intergenic | 55.0% |
| !! | AGGTGTTCGGGGTTTTGTGG+AGG | + | chr8.3:68616835-68616854 | None:intergenic | 55.0% |
| !! | GAATGGGTTATGCAACCGGG+TGG | - | chr8.3:68617821-68617840 | MS.gene051007:intron | 55.0% |
| !! | GGTGTTCGGGGTTTTGTGGA+GGG | + | chr8.3:68616834-68616853 | None:intergenic | 55.0% |
| !! | TCCTTTGGGGTAGCCTTGTG+TGG | + | chr8.3:68619391-68619410 | None:intergenic | 55.0% |
| !! | TTCGGGGTTTTGTGGAGGGT+TGG | + | chr8.3:68616830-68616849 | None:intergenic | 55.0% |
| !! | TTGGGGTAGCCTTGTGTGGA+AGG | + | chr8.3:68619387-68619406 | None:intergenic | 55.0% |
| !! | TTGTGGAGGGTTGGTGGATG+AGG | + | chr8.3:68616821-68616840 | None:intergenic | 55.0% |
| GGAGTCGGAGGTGAATGAGG+TGG | + | chr8.3:68617006-68617025 | None:intergenic | 60.0% | |
| GGTGAAGTAGCGGCGGAGAT+TGG | + | chr8.3:68616985-68617004 | None:intergenic | 60.0% | |
| GTGGTGGTCGTCGTCTTCGT+CGG | + | chr8.3:68616796-68616815 | None:intergenic | 60.0% | |
| TCGATCGGAGATGGAGTCGG+AGG | + | chr8.3:68617018-68617037 | None:intergenic | 60.0% | |
| !! | AAGCGGGATTGGCTTCAGCC+CGG | - | chr8.3:68619277-68619296 | MS.gene051007:CDS | 60.0% |
| !! | GGGGTTTTGTGGAGGGTTGG+TGG | + | chr8.3:68616827-68616846 | None:intergenic | 60.0% |
| !!! | GGGAGGTGTTCGGGGTTTTG+TGG | + | chr8.3:68616838-68616857 | None:intergenic | 60.0% |
| GTCGTCGTCTTCGTCGGAGG+AGG | + | chr8.3:68616790-68616809 | None:intergenic | 65.0% | |
| GTGGTCGTCGTCTTCGTCGG+AGG | + | chr8.3:68616793-68616812 | None:intergenic | 65.0% | |
| !! | AGCGGGATTGGCTTCAGCCC+GGG | - | chr8.3:68619278-68619297 | MS.gene051007:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 68616780 | 68620156 | 68616780 | ID=MS.gene051007 |
| chr8.3 | mRNA | 68616780 | 68620156 | 68616780 | ID=MS.gene051007.t1;Parent=MS.gene051007 |
| chr8.3 | exon | 68618955 | 68620156 | 68618955 | ID=MS.gene051007.t1.exon1;Parent=MS.gene051007.t1 |
| chr8.3 | CDS | 68618955 | 68620156 | 68618955 | ID=cds.MS.gene051007.t1;Parent=MS.gene051007.t1 |
| chr8.3 | exon | 68618212 | 68618461 | 68618212 | ID=MS.gene051007.t1.exon2;Parent=MS.gene051007.t1 |
| chr8.3 | CDS | 68618212 | 68618461 | 68618212 | ID=cds.MS.gene051007.t1;Parent=MS.gene051007.t1 |
| chr8.3 | exon | 68616780 | 68616956 | 68616780 | ID=MS.gene051007.t1.exon3;Parent=MS.gene051007.t1 |
| chr8.3 | CDS | 68616780 | 68616956 | 68616780 | ID=cds.MS.gene051007.t1;Parent=MS.gene051007.t1 |
| Gene Sequence |
| Protein sequence |
