Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066824.t1 | AES72057.2 | 99.5 | 380 | 2 | 0 | 1 | 380 | 1 | 380 | 6.60E-158 | 567 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066824.t1 | Q8GYF7 | 74.6 | 264 | 67 | 0 | 107 | 370 | 107 | 370 | 3.8e-106 | 386.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066824.t1 | G7JC14 | 99.5 | 380 | 2 | 0 | 1 | 380 | 1 | 380 | 4.7e-158 | 567.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052076 | MS.gene066824 | 0.809722 | 1.64E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041425 | MS.gene066824 | PPI |
| MS.gene066761 | MS.gene066824 | PPI |
| MS.gene066824 | MS.gene58234 | PPI |
| MS.gene066824 | MS.gene77100 | PPI |
| MS.gene066824 | MS.gene022597 | PPI |
| MS.gene066824 | MS.gene57751 | PPI |
| MS.gene066824 | MS.gene01351 | PPI |
| MS.gene83071 | MS.gene066824 | PPI |
| MS.gene066824 | MS.gene36232 | PPI |
| MS.gene98969 | MS.gene066824 | PPI |
| MS.gene042304 | MS.gene066824 | PPI |
| MS.gene25190 | MS.gene066824 | PPI |
| MS.gene066824 | MS.gene002376 | PPI |
| MS.gene066824 | MS.gene026533 | PPI |
| MS.gene066824 | MS.gene047509 | PPI |
| MS.gene86368 | MS.gene066824 | PPI |
| MS.gene89051 | MS.gene066824 | PPI |
| MS.gene041828 | MS.gene066824 | PPI |
| MS.gene066824 | MS.gene58754 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066824.t1 | MTR_3g085590 | 99.211 | 380 | 3 | 0 | 1 | 380 | 1 | 380 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066824.t1 | AT1G24310 | 67.560 | 373 | 106 | 4 | 10 | 370 | 1 | 370 | 1.96e-164 | 465 |
Find 117 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACCTTAAAAGCGTATT+TGG | 0.127759 | 3.4:-79908487 | None:intergenic |
| TGAGTAGTCAATTGAGAATT+TGG | 0.173685 | 3.4:-79908286 | None:intergenic |
| CTATCACCTTCTACTGGTTT+TGG | 0.175988 | 3.4:+79908223 | MS.gene066824:CDS |
| CAGACTTTGATCGTGAATTT+TGG | 0.193440 | 3.4:-79912167 | None:intergenic |
| TGGTAACTCAGCTCATCTTC+TGG | 0.215937 | 3.4:+79912138 | MS.gene066824:CDS |
| TATCTGCTTGAAAATGTCTT+TGG | 0.301845 | 3.4:-79911701 | None:intergenic |
| GAAGCGAGACGCACGGGATA+TGG | 0.316915 | 3.4:+79912408 | MS.gene066824:CDS |
| AAAACCTTAAAAGCGTATTT+GGG | 0.319798 | 3.4:-79908486 | None:intergenic |
| CAATCTTCATCTTCCCTCTT+CGG | 0.322179 | 3.4:+79907983 | MS.gene066824:CDS |
| AACCCAAAGCAATGTTAAAA+TGG | 0.323703 | 3.4:+79911582 | MS.gene066824:CDS |
| GTGTAACAGACCCACAGTTT+AGG | 0.324603 | 3.4:+79909140 | MS.gene066824:CDS |
| GTTGTTGCTGCTGCTGTTGT+TGG | 0.325620 | 3.4:-79908183 | None:intergenic |
| GACATGGGAACCTCAGAAAA+TGG | 0.331518 | 3.4:+79912448 | MS.gene066824:CDS |
| TTGTTGCTGCTGCTGTTGTT+GGG | 0.347224 | 3.4:-79908182 | None:intergenic |
| GGTAACTCAGCTCATCTTCT+GGG | 0.368462 | 3.4:+79912139 | MS.gene066824:CDS |
| CCTTCTTCAACTCCCGCTTT+TGG | 0.369276 | 3.4:+79908088 | MS.gene066824:CDS |
| GGATCTTTCCCAACGCCTTA+AGG | 0.376166 | 3.4:+79909375 | MS.gene066824:CDS |
| TGTAACAGACCCACAGTTTA+GGG | 0.381508 | 3.4:+79909141 | MS.gene066824:CDS |
| GCTTCTTCTACACCCGCTTT+CGG | 0.390655 | 3.4:+79908112 | MS.gene066824:CDS |
| AATCTTCATCTTCCCTCTTC+GGG | 0.396928 | 3.4:+79907984 | MS.gene066824:CDS |
| AAGGCTAATAGCAATGGATT+TGG | 0.408263 | 3.4:+79912118 | MS.gene066824:CDS |
| GATCATGTGGGCGGAAGCTA+TGG | 0.409669 | 3.4:+79909285 | MS.gene066824:intron |
| CTGGAGCGGAATTATCTAGA+AGG | 0.413522 | 3.4:+79912065 | MS.gene066824:CDS |
| GTGCTGATAGAGAACGTCTT+TGG | 0.413609 | 3.4:+79909329 | MS.gene066824:CDS |
| AAAATTTACCTTAAGGCGTT+GGG | 0.422159 | 3.4:-79909383 | None:intergenic |
| AACGGCGAAGGTTGCGGCGC+CGG | 0.423275 | 3.4:-79908262 | None:intergenic |
| GCATTCGGCACTCCAACTTT+CGG | 0.423472 | 3.4:+79908019 | MS.gene066824:CDS |
| GAAGAAGGGGTACCGAAGCC+TGG | 0.427369 | 3.4:-79908073 | None:intergenic |
| TTCTCAATTGACTACTCAAA+TGG | 0.443096 | 3.4:+79908291 | MS.gene066824:CDS |
| TGCCGTATTCCATTAACAAA+AGG | 0.445652 | 3.4:+79911919 | MS.gene066824:CDS |
| GCTTTCAGCACCCCAGGCTT+CGG | 0.445658 | 3.4:+79908061 | MS.gene066824:CDS |
| TCTACACCCGCTTTCGGTGG+TGG | 0.448947 | 3.4:+79908118 | MS.gene066824:CDS |
| GGGACCCCATCTTCAGCATT+CGG | 0.452689 | 3.4:+79908004 | MS.gene066824:CDS |
| TGAAACCCAAAACCAGTAGA+AGG | 0.453433 | 3.4:-79908229 | None:intergenic |
| GAGAATAGTGGAGGCGTTGG+AGG | 0.455797 | 3.4:+79911888 | MS.gene066824:CDS |
| TTCAAGCAGATACTCTTCCT+TGG | 0.459845 | 3.4:+79911712 | MS.gene066824:CDS |
| CTTTGGCCACAACAAGTTCA+AGG | 0.461110 | 3.4:+79909346 | MS.gene066824:CDS |
| ACGCCGCACACCACCATGTT+CGG | 0.462481 | 3.4:+79907956 | None:intergenic |
| AAGCCTGGGGTGCTGAAAGC+TGG | 0.465129 | 3.4:-79908058 | None:intergenic |
| CAAAATTCACGATCAAAGTC+TGG | 0.467189 | 3.4:+79912168 | MS.gene066824:CDS |
| TCCGCTAGTGAGAATGGAAC+TGG | 0.468365 | 3.4:-79908325 | None:intergenic |
| TATGGGGAAGCTTGAGGGTA+TGG | 0.469058 | 3.4:+79909303 | MS.gene066824:CDS |
| CAGTTTAGGGTGAAGCCTGC+TGG | 0.475949 | 3.4:+79909154 | MS.gene066824:CDS |
| TTTGGAAACGGCGAAGGTTG+CGG | 0.476917 | 3.4:-79908268 | None:intergenic |
| TCAAAGTCTGGCTGACCTGC+AGG | 0.480292 | 3.4:+79912180 | MS.gene066824:CDS |
| GTCAATTGAGAATTTGGAAA+CGG | 0.480882 | 3.4:-79908280 | None:intergenic |
| GATGAGAATAGTGGAGGCGT+TGG | 0.481773 | 3.4:+79911885 | MS.gene066824:CDS |
| TCACGATCCGCTAGTGAGAA+TGG | 0.483587 | 3.4:-79908331 | None:intergenic |
| GCCGTATTCCATTAACAAAA+GGG | 0.485365 | 3.4:+79911920 | MS.gene066824:CDS |
| TTTCAACTATCACCTTCTAC+TGG | 0.487130 | 3.4:+79908217 | MS.gene066824:CDS |
| GAAGCTATGGGGAAGCTTGA+GGG | 0.490154 | 3.4:+79909298 | MS.gene066824:CDS |
| CAGAGACAATGACTTCATCT+TGG | 0.494474 | 3.4:-79911540 | None:intergenic |
| AAGAAGGGGTACCGAAGCCT+GGG | 0.499083 | 3.4:-79908072 | None:intergenic |
| TTAAAACCTTGAACTTGTTG+TGG | 0.500336 | 3.4:-79909352 | None:intergenic |
| GTGGAGGCGTTGGAGGGAAA+AGG | 0.503729 | 3.4:+79911895 | MS.gene066824:CDS |
| CCAAAAGCGGGAGTTGAAGA+AGG | 0.506648 | 3.4:-79908088 | None:intergenic |
| ACACCAGCTTTCAGCACCCC+AGG | 0.510458 | 3.4:+79908055 | MS.gene066824:CDS |
| TTCTACCTGTCTAGTTATTG+TGG | 0.512168 | 3.4:-79911968 | None:intergenic |
| TGTTGCTGCTGCTGTTGTTG+GGG | 0.517011 | 3.4:-79908181 | None:intergenic |
| AGAGAACGGTGTTGAGAAGA+GGG | 0.519091 | 3.4:-79908146 | None:intergenic |
| GATTATGATGGCTGAGGACA+TGG | 0.520825 | 3.4:+79912432 | MS.gene066824:CDS |
| TGTTTCAGTCTTTGAATCCA+AGG | 0.521920 | 3.4:-79911729 | None:intergenic |
| ACAGGTATTGCAGCAGCAGA+TGG | 0.527438 | 3.4:+79912357 | MS.gene066824:intron |
| GATTCTTATAAAGAAGATGC+TGG | 0.529366 | 3.4:+79908459 | MS.gene066824:CDS |
| TGAGAATTTGGAAACGGCGA+AGG | 0.531345 | 3.4:-79908274 | None:intergenic |
| GGTAGAATCTTACCTCCTGC+AGG | 0.538215 | 3.4:-79912195 | None:intergenic |
| GGAGTGCCGAATGCTGAAGA+TGG | 0.538730 | 3.4:-79908010 | None:intergenic |
| ACTAGCCACAATAACTAGAC+AGG | 0.539256 | 3.4:+79911963 | MS.gene066824:CDS |
| ATCATGTGGGCGGAAGCTAT+GGG | 0.541380 | 3.4:+79909286 | MS.gene066824:CDS |
| CGTGTCAAGGCTAATAGCAA+TGG | 0.543360 | 3.4:+79912112 | MS.gene066824:CDS |
| CTGAAGATGGGGTCCCGAAG+AGG | 0.544355 | 3.4:-79907997 | None:intergenic |
| CAGAGAACGGTGTTGAGAAG+AGG | 0.544554 | 3.4:-79908147 | None:intergenic |
| GGAAGCTATGGGGAAGCTTG+AGG | 0.544713 | 3.4:+79909297 | MS.gene066824:CDS |
| GTTTATGTTGCTAGATCATG+TGG | 0.544933 | 3.4:+79909272 | MS.gene066824:intron |
| AGTAGAAGGTGATAGTTGAA+AGG | 0.545911 | 3.4:-79908215 | None:intergenic |
| CTGAAAGCTGGTGTTGAAGA+AGG | 0.547067 | 3.4:-79908046 | None:intergenic |
| AGAATAGTGGAGGCGTTGGA+GGG | 0.552709 | 3.4:+79911889 | MS.gene066824:CDS |
| GTAGAAGGTGATAGTTGAAA+GGG | 0.559248 | 3.4:-79908214 | None:intergenic |
| GAGTGCCGAATGCTGAAGAT+GGG | 0.561315 | 3.4:-79908009 | None:intergenic |
| TGTTCTGAAGCGAGACGCAC+GGG | 0.561337 | 3.4:+79912402 | MS.gene066824:CDS |
| AACACTGCCAAGTCTTGCTA+TGG | 0.563127 | 3.4:-79912383 | None:intergenic |
| GAAGAACCACCACCGAAAGC+GGG | 0.563527 | 3.4:-79908124 | None:intergenic |
| GAAGAAGGAGTACCGAAAGT+TGG | 0.564163 | 3.4:-79908031 | None:intergenic |
| GTGTTCTGAAGCGAGACGCA+CGG | 0.568554 | 3.4:+79912401 | MS.gene066824:CDS |
| GGAAGAACCACCACCGAAAG+CGG | 0.569387 | 3.4:-79908125 | None:intergenic |
| TCCAGTTCCATTCTCACTAG+CGG | 0.572002 | 3.4:+79908324 | MS.gene066824:CDS |
| TGAAGATGGGGTCCCGAAGA+GGG | 0.572735 | 3.4:-79907996 | None:intergenic |
| TGAAGATTGACCGCCGAACA+TGG | 0.577493 | 3.4:-79907969 | None:intergenic |
| ATTGAAGGTGATGAGAATAG+TGG | 0.583298 | 3.4:+79911876 | MS.gene066824:intron |
| CAAAAGCGGGAGTTGAAGAA+GGG | 0.585231 | 3.4:-79908087 | None:intergenic |
| GTAGAAGAAGCACCAAAAGC+GGG | 0.586298 | 3.4:-79908100 | None:intergenic |
| TCTTCTACACCCGCTTTCGG+TGG | 0.586639 | 3.4:+79908115 | MS.gene066824:CDS |
| ACGGGATATGGAGATTATGA+TGG | 0.590444 | 3.4:+79912420 | MS.gene066824:CDS |
| TATGGAGATTATGATGGCTG+AGG | 0.590797 | 3.4:+79912426 | MS.gene066824:CDS |
| ATGGATGCCATAGCAAGACT+TGG | 0.599180 | 3.4:+79912376 | MS.gene066824:CDS |
| CAGGCTTCACCCTAAACTGT+GGG | 0.612681 | 3.4:-79909150 | None:intergenic |
| ATTATGATGGCTGAGGACAT+GGG | 0.618742 | 3.4:+79912433 | MS.gene066824:CDS |
| CTTACATCTGAAACACCAGC+AGG | 0.625885 | 3.4:-79909169 | None:intergenic |
| CCGTATTCCATTAACAAAAG+GGG | 0.630334 | 3.4:+79911921 | MS.gene066824:CDS |
| AAACCTTAAAAGCGTATTTG+GGG | 0.630724 | 3.4:-79908485 | None:intergenic |
| TGGAGCGGAATTATCTAGAA+GGG | 0.631061 | 3.4:+79912066 | MS.gene066824:CDS |
| GGTTGTTGTTGAGCAGAGAA+CGG | 0.632380 | 3.4:-79908160 | None:intergenic |
| TCAGCTGAAAGGATCTGGAG+CGG | 0.638114 | 3.4:+79912051 | MS.gene066824:intron |
| TGTAGAAGAAGCACCAAAAG+CGG | 0.643383 | 3.4:-79908101 | None:intergenic |
| GCAGGCTTCACCCTAAACTG+TGG | 0.646030 | 3.4:-79909151 | None:intergenic |
| GAAGGTGATGAGAATAGTGG+AGG | 0.650075 | 3.4:+79911879 | MS.gene066824:intron |
| ACTCGGCGTATCTCGTGTCA+AGG | 0.651033 | 3.4:+79912099 | MS.gene066824:CDS |
| AGAAGGGTACAAAATCTACT+CGG | 0.654843 | 3.4:+79912082 | MS.gene066824:CDS |
| TGGGTTTCAGAATTCTACGC+CGG | 0.655438 | 3.4:+79908243 | MS.gene066824:CDS |
| CCGCACACCACCATGTTCGG+CGG | 0.655972 | 3.4:+79907959 | None:intergenic |
| AAGTCTGGCTGACCTGCAGG+AGG | 0.657558 | 3.4:+79912183 | MS.gene066824:CDS |
| TCATGTGGGCGGAAGCTATG+GGG | 0.675093 | 3.4:+79909287 | MS.gene066824:CDS |
| TTTATGTTGCTAGATCATGT+GGG | 0.694092 | 3.4:+79909273 | MS.gene066824:intron |
| ATGTTGCTAGATCATGTGGG+CGG | 0.703435 | 3.4:+79909276 | MS.gene066824:intron |
| AAAAGCGGGAGTTGAAGAAG+GGG | 0.703806 | 3.4:-79908086 | None:intergenic |
| AGAAGGGGTACCGAAGCCTG+GGG | 0.706896 | 3.4:-79908071 | None:intergenic |
| AGTGCCGAATGCTGAAGATG+GGG | 0.747720 | 3.4:-79908008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTATTTGGAATTATA+GGG | + | chr3.4:79908532-79908551 | MS.gene066824:intron | 10.0% |
| !!! | AGTTTAATTTTTAGTAAAAT+AGG | + | chr3.4:79909810-79909829 | MS.gene066824:intron | 10.0% |
| !!! | GTTTAATTTTTAGTAAAATA+GGG | + | chr3.4:79909811-79909830 | MS.gene066824:intron | 10.0% |
| !!! | TAAAATTTATTTGGAATTAT+AGG | + | chr3.4:79908531-79908550 | MS.gene066824:intron | 10.0% |
| !!! | TTCTTCATTTAAAATTTATT+TGG | + | chr3.4:79908522-79908541 | MS.gene066824:intron | 10.0% |
| !!! | TTTAATTTTTAGTAAAATAG+GGG | + | chr3.4:79909812-79909831 | MS.gene066824:intron | 10.0% |
| !! | ATCATAAAATTTCCAAATAT+TGG | + | chr3.4:79909605-79909624 | MS.gene066824:intron | 15.0% |
| !! | ATTTATTCTAACAAGAAAAT+GGG | - | chr3.4:79910257-79910276 | None:intergenic | 15.0% |
| !! | CTAAAACAACTAAAATTAAT+AGG | - | chr3.4:79911105-79911124 | None:intergenic | 15.0% |
| !! | TATTGATCTAATACTAAAAT+TGG | - | chr3.4:79911319-79911338 | None:intergenic | 15.0% |
| !! | TATTTATTCTAACAAGAAAA+TGG | - | chr3.4:79910258-79910277 | None:intergenic | 15.0% |
| !! | TGTTTATAATAGATTTAGAA+TGG | - | chr3.4:79909891-79909910 | None:intergenic | 15.0% |
| !! | TTAATTAACAAGTTAAAACA+AGG | + | chr3.4:79910300-79910319 | MS.gene066824:intron | 15.0% |
| !!! | AAACTAGTTGATTAAATTTT+TGG | + | chr3.4:79908763-79908782 | MS.gene066824:intron | 15.0% |
| !!! | AATATTTGGAAATTTTATGA+TGG | - | chr3.4:79909606-79909625 | None:intergenic | 15.0% |
| !!! | AGCTTATAACTTATTTTTAT+TGG | - | chr3.4:79908963-79908982 | None:intergenic | 15.0% |
| !!! | TTTTTATAGTGTTTAAAACA+GGG | + | chr3.4:79909466-79909485 | MS.gene066824:intron | 15.0% |
| !!! | TTTTTTATAGTGTTTAAAAC+AGG | + | chr3.4:79909465-79909484 | MS.gene066824:intron | 15.0% |
| !! | AAAATTTCCAAATATTGGTA+TGG | + | chr3.4:79909610-79909629 | MS.gene066824:intron | 20.0% |
| !! | AATTAGAAACTGTTGAAATA+CGG | + | chr3.4:79911478-79911497 | MS.gene066824:intron | 20.0% |
| !! | AGAAAATAAAACGTATTAGA+TGG | - | chr3.4:79909504-79909523 | None:intergenic | 20.0% |
| !! | AGAAATGTCATGTAATTTAT+AGG | - | chr3.4:79910823-79910842 | None:intergenic | 20.0% |
| !! | ATTATAGCAATGAATTTGAT+AGG | + | chr3.4:79909695-79909714 | MS.gene066824:intron | 20.0% |
| !! | TATATTGAAATATGCCATAA+TGG | + | chr3.4:79911374-79911393 | MS.gene066824:intron | 20.0% |
| !! | TATTAATATAGCATGTGTTT+GGG | + | chr3.4:79911167-79911186 | MS.gene066824:intron | 20.0% |
| !! | TATTTAACATCTAAATTGCA+AGG | - | chr3.4:79909920-79909939 | None:intergenic | 20.0% |
| !! | TTATTAATATAGCATGTGTT+TGG | + | chr3.4:79911166-79911185 | MS.gene066824:intron | 20.0% |
| !! | TTTGGATAAATAGCTTAATT+AGG | - | chr3.4:79908578-79908597 | None:intergenic | 20.0% |
| !!! | ACATTTTAAATGAAGTTGAT+CGG | + | chr3.4:79910864-79910883 | MS.gene066824:intron | 20.0% |
| !!! | TTATCTTTGTTTTTCCAATT+AGG | + | chr3.4:79908428-79908447 | MS.gene066824:intron | 20.0% |
| !!! | TTATTTTCTTTACCAATTTG+TGG | + | chr3.4:79909515-79909534 | MS.gene066824:intron | 20.0% |
| !!! | TTGATTAAATTTTTGGTGTT+TGG | + | chr3.4:79908770-79908789 | MS.gene066824:intron | 20.0% |
| ! | AAAACTACCATACCAATATT+TGG | - | chr3.4:79909620-79909639 | None:intergenic | 25.0% |
| ! | AAAAGTTTAATTCCGATGTT+TGG | - | chr3.4:79909576-79909595 | None:intergenic | 25.0% |
| ! | AAACGAGAGAAATATGATAT+GGG | + | chr3.4:79911125-79911144 | MS.gene066824:intron | 25.0% |
| ! | AAAGTTTAATTCCGATGTTT+GGG | - | chr3.4:79909575-79909594 | None:intergenic | 25.0% |
| ! | AATATATACAACTCTTCACT+GGG | + | chr3.4:79911347-79911366 | MS.gene066824:intron | 25.0% |
| ! | ACATATGATTAGACATAATG+AGG | - | chr3.4:79911852-79911871 | None:intergenic | 25.0% |
| ! | AGCAGAAAAAATTTACCTTA+AGG | - | chr3.4:79909393-79909412 | None:intergenic | 25.0% |
| ! | ATAATGATGTGGAAATGAAA+GGG | - | chr3.4:79910632-79910651 | None:intergenic | 25.0% |
| ! | ATATGATTAGACATAATGAG+GGG | - | chr3.4:79911850-79911869 | None:intergenic | 25.0% |
| ! | ATATGCTAAAGGATAAGTTA+AGG | + | chr3.4:79911263-79911282 | MS.gene066824:intron | 25.0% |
| ! | ATGATAAATTAGGTTCTGTT+TGG | - | chr3.4:79908596-79908615 | None:intergenic | 25.0% |
| ! | ATGGGAATAATATATGCTAA+AGG | + | chr3.4:79911252-79911271 | MS.gene066824:intron | 25.0% |
| ! | ATTAGAAACTGTTGAAATAC+GGG | + | chr3.4:79911479-79911498 | MS.gene066824:intron | 25.0% |
| ! | CATATGATTAGACATAATGA+GGG | - | chr3.4:79911851-79911870 | None:intergenic | 25.0% |
| ! | GAAACAGCTTATGATAAATT+AGG | - | chr3.4:79908606-79908625 | None:intergenic | 25.0% |
| ! | GTCAATTCTAAGTAAAATGT+TGG | + | chr3.4:79910398-79910417 | MS.gene066824:intron | 25.0% |
| ! | TAAAACAAGGCATAACATAT+GGG | + | chr3.4:79910313-79910332 | MS.gene066824:intron | 25.0% |
| ! | TAAAATCAAGTTCAAATGTC+TGG | - | chr3.4:79910004-79910023 | None:intergenic | 25.0% |
| ! | TAATGATAGGTGAAATTGAA+TGG | - | chr3.4:79909646-79909665 | None:intergenic | 25.0% |
| ! | TAGATATCCAAACAGAAAAT+AGG | + | chr3.4:79909664-79909683 | MS.gene066824:intron | 25.0% |
| ! | TGTGAAAAGTAGAACAAAAT+AGG | + | chr3.4:79910357-79910376 | MS.gene066824:intron | 25.0% |
| ! | TTAAAACAAGGCATAACATA+TGG | + | chr3.4:79910312-79910331 | MS.gene066824:intron | 25.0% |
| !! | AAAACCTTAAAAGCGTATTT+GGG | - | chr3.4:79908489-79908508 | None:intergenic | 25.0% |
| !! | AGACAATTTAAGACAGATTA+TGG | - | chr3.4:79908628-79908647 | None:intergenic | 25.0% |
| !! | CTTGAATATACGATTTTAGA+AGG | + | chr3.4:79909743-79909762 | MS.gene066824:intron | 25.0% |
| !! | GAAATATATGCTTTTCTGAA+AGG | - | chr3.4:79910579-79910598 | None:intergenic | 25.0% |
| !! | GTTCTATTTTCAAAACAAAC+TGG | + | chr3.4:79910149-79910168 | MS.gene066824:intron | 25.0% |
| !!! | AACTTAAGCTGTTTTTGAAA+AGG | - | chr3.4:79910526-79910545 | None:intergenic | 25.0% |
| !!! | AATAACCATGCCTTTTAATT+TGG | - | chr3.4:79911151-79911170 | None:intergenic | 25.0% |
| !!! | ACTTAAGCTGTTTTTGAAAA+GGG | - | chr3.4:79910525-79910544 | None:intergenic | 25.0% |
| !!! | ATACCATTTTAACATTGCTT+TGG | - | chr3.4:79911588-79911607 | None:intergenic | 25.0% |
| !!! | TACCATTTTAACATTGCTTT+GGG | - | chr3.4:79911587-79911606 | None:intergenic | 25.0% |
| !!! | TATACGATTTTAGAAGGAAA+TGG | + | chr3.4:79909749-79909768 | MS.gene066824:intron | 25.0% |
| !!! | TTTTTTCTCAACTTTTGTTG+TGG | - | chr3.4:79910996-79911015 | None:intergenic | 25.0% |
| AAAAAATGAAACTGAACAGC+TGG | - | chr3.4:79910445-79910464 | None:intergenic | 30.0% | |
| AAAAATTTACCTTAAGGCGT+TGG | - | chr3.4:79909387-79909406 | None:intergenic | 30.0% | |
| AACATCTAAATTGCAAGGTA+AGG | - | chr3.4:79909915-79909934 | None:intergenic | 30.0% | |
| AACCCAAAGCAATGTTAAAA+TGG | + | chr3.4:79911582-79911601 | MS.gene066824:CDS | 30.0% | |
| AAGGAAATGGATGTTCATAT+GGG | + | chr3.4:79909762-79909781 | MS.gene066824:intron | 30.0% | |
| AATTATAGGGTCATGGATAT+AGG | + | chr3.4:79908545-79908564 | MS.gene066824:intron | 30.0% | |
| ATAAGCTTGTGAGAAAATGA+CGG | + | chr3.4:79908976-79908995 | MS.gene066824:intron | 30.0% | |
| ATATATATATAGACGTGCGT+CGG | + | chr3.4:79910199-79910218 | MS.gene066824:intron | 30.0% | |
| ATCAGCTCATATGACTAAAA+AGG | - | chr3.4:79909015-79909034 | None:intergenic | 30.0% | |
| ATGAGAAAACATGAAAGCTA+CGG | - | chr3.4:79909082-79909101 | None:intergenic | 30.0% | |
| ATGATATGGGCCAAATTAAA+AGG | + | chr3.4:79911138-79911157 | MS.gene066824:intron | 30.0% | |
| ATTATAGGGTCATGGATATA+GGG | + | chr3.4:79908546-79908565 | MS.gene066824:intron | 30.0% | |
| CATAATGATGTGGAAATGAA+AGG | - | chr3.4:79910633-79910652 | None:intergenic | 30.0% | |
| CATATATTATTCCCATTCGT+AGG | - | chr3.4:79911248-79911267 | None:intergenic | 30.0% | |
| CTGTTTGGATATCTAATGAT+AGG | - | chr3.4:79909659-79909678 | None:intergenic | 30.0% | |
| GAAACGAGAGAAATATGATA+TGG | + | chr3.4:79911124-79911143 | MS.gene066824:intron | 30.0% | |
| GAAGAACTCAATGTTAATGA+TGG | + | chr3.4:79912320-79912339 | MS.gene066824:intron | 30.0% | |
| GAATATATACAACTCTTCAC+TGG | + | chr3.4:79911346-79911365 | MS.gene066824:intron | 30.0% | |
| GAATTTGATAGGTTAACTAC+TGG | + | chr3.4:79909706-79909725 | MS.gene066824:intron | 30.0% | |
| GATAGGTTAGCATAAAAAAC+CGG | - | chr3.4:79911652-79911671 | None:intergenic | 30.0% | |
| GATTCTTATAAAGAAGATGC+TGG | + | chr3.4:79908459-79908478 | MS.gene066824:CDS | 30.0% | |
| GCTTATAAGTTAACTTACAG+CGG | + | chr3.4:79908720-79908739 | MS.gene066824:intron | 30.0% | |
| GTCAATTGAGAATTTGGAAA+CGG | - | chr3.4:79908283-79908302 | None:intergenic | 30.0% | |
| GTCTAAGTTACTGTTTGAAT+CGG | - | chr3.4:79908675-79908694 | None:intergenic | 30.0% | |
| TAAACCTCATATTGCCATAT+TGG | - | chr3.4:79912219-79912238 | None:intergenic | 30.0% | |
| TAATCATATGTCGTGATTGA+AGG | + | chr3.4:79911861-79911880 | MS.gene066824:intron | 30.0% | |
| TAATGATGTGGAAATGAAAG+GGG | - | chr3.4:79910631-79910650 | None:intergenic | 30.0% | |
| TATCTGCTTGAAAATGTCTT+TGG | - | chr3.4:79911704-79911723 | None:intergenic | 30.0% | |
| TATGTTTGGATTGATTGGAA+GGG | + | chr3.4:79909417-79909436 | MS.gene066824:intron | 30.0% | |
| TGAGTAAAAATGTGTCATCA+AGG | - | chr3.4:79911505-79911524 | None:intergenic | 30.0% | |
| TGAGTAGTCAATTGAGAATT+TGG | - | chr3.4:79908289-79908308 | None:intergenic | 30.0% | |
| TGATTGATTGCATAATGATG+TGG | - | chr3.4:79910643-79910662 | None:intergenic | 30.0% | |
| TTCTCAATTGACTACTCAAA+TGG | + | chr3.4:79908291-79908310 | MS.gene066824:CDS | 30.0% | |
| TTTAAATGAAGAAGACAGAG+AGG | - | chr3.4:79908515-79908534 | None:intergenic | 30.0% | |
| TTTATGTTGCTAGATCATGT+GGG | + | chr3.4:79909273-79909292 | MS.gene066824:intron | 30.0% | |
| TTTCAAAACAAACTGGTGAT+AGG | + | chr3.4:79910156-79910175 | MS.gene066824:intron | 30.0% | |
| ! | AAAATGTCTTTTCAGCTGAA+AGG | + | chr3.4:79912040-79912059 | MS.gene066824:intron | 30.0% |
| ! | AAAATTTACCTTAAGGCGTT+GGG | - | chr3.4:79909386-79909405 | None:intergenic | 30.0% |
| ! | AAACCTTAAAAGCGTATTTG+GGG | - | chr3.4:79908488-79908507 | None:intergenic | 30.0% |
| ! | AAATGAAAAAGGTGTAGTGT+AGG | - | chr3.4:79910485-79910504 | None:intergenic | 30.0% |
| ! | ACAACAAGTTCAAGGTTTTA+AGG | + | chr3.4:79909354-79909373 | MS.gene066824:CDS | 30.0% |
| ! | ATTTGATGATAGAAAGAGGT+AGG | + | chr3.4:79911034-79911053 | MS.gene066824:intron | 30.0% |
| ! | CATTAAATGTCCATTTTCTG+AGG | - | chr3.4:79912461-79912480 | None:intergenic | 30.0% |
| ! | GAAAACCTTAAAAGCGTATT+TGG | - | chr3.4:79908490-79908509 | None:intergenic | 30.0% |
| ! | TATAGTGTTTAAAACAGGGT+TGG | + | chr3.4:79909470-79909489 | MS.gene066824:intron | 30.0% |
| ! | TATTTGGAATTATAGGGTCA+TGG | + | chr3.4:79908538-79908557 | MS.gene066824:intron | 30.0% |
| ! | TGACATTTGATGATAGAAAG+AGG | + | chr3.4:79911030-79911049 | MS.gene066824:intron | 30.0% |
| ! | TGTAAATCCCCATTTTGTAA+CGG | + | chr3.4:79910740-79910759 | MS.gene066824:intron | 30.0% |
| !! | AGCAACGTATTTTAAGAGTA+TGG | + | chr3.4:79911769-79911788 | MS.gene066824:intron | 30.0% |
| !! | AGTTTTGGTCCAAATGAAAA+AGG | - | chr3.4:79910496-79910515 | None:intergenic | 30.0% |
| !! | TACACTACACCTTTTTCATT+TGG | + | chr3.4:79910484-79910503 | MS.gene066824:intron | 30.0% |
| !! | TCAAAAACAGCTTAAGTTGA+TGG | + | chr3.4:79910528-79910547 | MS.gene066824:intron | 30.0% |
| !! | TTAAAACCTTGAACTTGTTG+TGG | - | chr3.4:79909355-79909374 | None:intergenic | 30.0% |
| !!! | TATGGGTTTTGTTTCATGTT+TGG | + | chr3.4:79910330-79910349 | MS.gene066824:intron | 30.0% |
| AATGATGTGGAAATGAAAGG+GGG | - | chr3.4:79910630-79910649 | None:intergenic | 35.0% | |
| AATGCATCCGTTACAAAATG+GGG | - | chr3.4:79910750-79910769 | None:intergenic | 35.0% | |
| AGAAAATGACGGTTACCAAA+CGG | + | chr3.4:79908987-79909006 | MS.gene066824:intron | 35.0% | |
| AGAATCAAGAATCGCCTAAT+TGG | - | chr3.4:79908445-79908464 | None:intergenic | 35.0% | |
| AGGAAATGGATGTTCATATG+GGG | + | chr3.4:79909763-79909782 | MS.gene066824:intron | 35.0% | |
| AGTAGAAGGTGATAGTTGAA+AGG | - | chr3.4:79908218-79908237 | None:intergenic | 35.0% | |
| AGTCATGTTCCTAAAAGCTT+TGG | - | chr3.4:79911293-79911312 | None:intergenic | 35.0% | |
| ATGACTAAAAAGGATCCGTT+TGG | - | chr3.4:79909005-79909024 | None:intergenic | 35.0% | |
| ATGTTTGGATTGATTGGAAG+GGG | + | chr3.4:79909418-79909437 | MS.gene066824:intron | 35.0% | |
| ATTGAAGGTGATGAGAATAG+TGG | + | chr3.4:79911876-79911895 | MS.gene066824:intron | 35.0% | |
| CAAAATTCACGATCAAAGTC+TGG | + | chr3.4:79912168-79912187 | MS.gene066824:CDS | 35.0% | |
| CAATGCATCCGTTACAAAAT+GGG | - | chr3.4:79910751-79910770 | None:intergenic | 35.0% | |
| CATCAGAGAATCGAAAAGAT+AGG | - | chr3.4:79911669-79911688 | None:intergenic | 35.0% | |
| CCGTATTCCATTAACAAAAG+GGG | + | chr3.4:79911921-79911940 | MS.gene066824:CDS | 35.0% | |
| CTATGTTTGGATTGATTGGA+AGG | + | chr3.4:79909416-79909435 | MS.gene066824:intron | 35.0% | |
| CTCTGCTTTAGTATAAACCA+TGG | - | chr3.4:79910072-79910091 | None:intergenic | 35.0% | |
| GAAGGAAATGGATGTTCATA+TGG | + | chr3.4:79909761-79909780 | MS.gene066824:intron | 35.0% | |
| GACTAACATACCAATCTTTG+CGG | - | chr3.4:79910940-79910959 | None:intergenic | 35.0% | |
| GAGGTAAGATTCTACCAATA+TGG | + | chr3.4:79912202-79912221 | MS.gene066824:intron | 35.0% | |
| GCCGTATTCCATTAACAAAA+GGG | + | chr3.4:79911920-79911939 | MS.gene066824:CDS | 35.0% | |
| GTAGAAGGTGATAGTTGAAA+GGG | - | chr3.4:79908217-79908236 | None:intergenic | 35.0% | |
| GTTTATGTTGCTAGATCATG+TGG | + | chr3.4:79909272-79909291 | MS.gene066824:intron | 35.0% | |
| TCCAATCAATCCAAACATAG+TGG | - | chr3.4:79909416-79909435 | None:intergenic | 35.0% | |
| TCCACTATGTTTGGATTGAT+TGG | + | chr3.4:79909412-79909431 | MS.gene066824:intron | 35.0% | |
| TCCCAAGAAAAATGTTGAAC+CGG | + | chr3.4:79911624-79911643 | MS.gene066824:intron | 35.0% | |
| TCTACCAATATGGCAATATG+AGG | + | chr3.4:79912212-79912231 | MS.gene066824:intron | 35.0% | |
| TCTTTACCAATTTGTGGCTA+TGG | + | chr3.4:79909521-79909540 | MS.gene066824:intron | 35.0% | |
| TGCCGTATTCCATTAACAAA+AGG | + | chr3.4:79911919-79911938 | MS.gene066824:CDS | 35.0% | |
| TGTTTCAGTCTTTGAATCCA+AGG | - | chr3.4:79911732-79911751 | None:intergenic | 35.0% | |
| TTAGCATAAAAAACCGGTAC+CGG | - | chr3.4:79911646-79911665 | None:intergenic | 35.0% | |
| TTAGTAAAATAGGGGAAACC+TGG | + | chr3.4:79909820-79909839 | MS.gene066824:intron | 35.0% | |
| TTCTACTCTAGTCTCTGTTA+TGG | + | chr3.4:79910839-79910858 | MS.gene066824:intron | 35.0% | |
| TTTCAACTATCACCTTCTAC+TGG | + | chr3.4:79908217-79908236 | MS.gene066824:CDS | 35.0% | |
| ! | AAACCCCAAATACGCTTTTA+AGG | + | chr3.4:79908482-79908501 | MS.gene066824:CDS | 35.0% |
| ! | AACAGCTACTCTGTGTTATT+AGG | - | chr3.4:79910705-79910724 | None:intergenic | 35.0% |
| ! | AAGGCTAATAGCAATGGATT+TGG | + | chr3.4:79912118-79912137 | MS.gene066824:CDS | 35.0% |
| ! | AGAAGGGTACAAAATCTACT+CGG | + | chr3.4:79912082-79912101 | MS.gene066824:CDS | 35.0% |
| ! | CAGACTTTGATCGTGAATTT+TGG | - | chr3.4:79912170-79912189 | None:intergenic | 35.0% |
| ! | CCCCTTTTGTTAATGGAATA+CGG | - | chr3.4:79911924-79911943 | None:intergenic | 35.0% |
| ! | CTATCTTTTCGATTCTCTGA+TGG | + | chr3.4:79911667-79911686 | MS.gene066824:intron | 35.0% |
| ! | GCTTTCATGTTTTCTCATGT+TGG | + | chr3.4:79909084-79909103 | MS.gene066824:intron | 35.0% |
| ! | TACGATGCCTATTTTCTGTT+TGG | - | chr3.4:79909674-79909693 | None:intergenic | 35.0% |
| ! | TGAAAAGGGAGAATGAGTTT+TGG | - | chr3.4:79910511-79910530 | None:intergenic | 35.0% |
| ! | TTGCTGATGTCAAGATTTTG+TGG | + | chr3.4:79910099-79910118 | MS.gene066824:intron | 35.0% |
| ! | TTTTTCTGCTCCACTATGTT+TGG | + | chr3.4:79909403-79909422 | MS.gene066824:intron | 35.0% |
| ! | TTTTTCTTATGTCATGCCAC+TGG | + | chr3.4:79909233-79909252 | MS.gene066824:intron | 35.0% |
| ! | TTTTTGCACCAAATACTGAC+TGG | - | chr3.4:79911429-79911448 | None:intergenic | 35.0% |
| !! | ACCGGTTCAACATTTTTCTT+GGG | - | chr3.4:79911628-79911647 | None:intergenic | 35.0% |
| !! | TTTCTCAACTTTTGTTGTGG+CGG | - | chr3.4:79910993-79911012 | None:intergenic | 35.0% |
| !!! | TACCGGTTCAACATTTTTCT+TGG | - | chr3.4:79911629-79911648 | None:intergenic | 35.0% |
| !!! | TATCACCTTCTACTGGTTTT+GGG | + | chr3.4:79908224-79908243 | MS.gene066824:CDS | 35.0% |
| AACTGAGCTTCCATGATAGT+TGG | + | chr3.4:79909846-79909865 | MS.gene066824:intron | 40.0% | |
| AATCTTCATCTTCCCTCTTC+GGG | + | chr3.4:79907984-79908003 | MS.gene066824:CDS | 40.0% | |
| AATGGATGTTCATATGGGGT+TGG | + | chr3.4:79909767-79909786 | MS.gene066824:intron | 40.0% | |
| ACGGGATATGGAGATTATGA+TGG | + | chr3.4:79912420-79912439 | MS.gene066824:CDS | 40.0% | |
| AGAAGGACAATGCACAAACT+TGG | - | chr3.4:79911223-79911242 | None:intergenic | 40.0% | |
| ATATACAACTCTTCACTGGG+TGG | + | chr3.4:79911350-79911369 | MS.gene066824:intron | 40.0% | |
| ATGAAAGCTACGGTTCTGTT+TGG | - | chr3.4:79909072-79909091 | None:intergenic | 40.0% | |
| ATGATAGAAAGAGGTAGGAG+TGG | + | chr3.4:79911039-79911058 | MS.gene066824:intron | 40.0% | |
| ATGGATGTTCATATGGGGTT+GGG | + | chr3.4:79909768-79909787 | MS.gene066824:intron | 40.0% | |
| ATGGGCCAAATTAAAAGGCA+TGG | + | chr3.4:79911143-79911162 | MS.gene066824:intron | 40.0% | |
| ATTATGATGGCTGAGGACAT+GGG | + | chr3.4:79912433-79912452 | MS.gene066824:CDS | 40.0% | |
| ATTCCCATTCGTAGGTTAGA+AGG | - | chr3.4:79911240-79911259 | None:intergenic | 40.0% | |
| CAATCTTCATCTTCCCTCTT+CGG | + | chr3.4:79907983-79908002 | MS.gene066824:CDS | 40.0% | |
| CAGAGACAATGACTTCATCT+TGG | - | chr3.4:79911543-79911562 | None:intergenic | 40.0% | |
| CCAATGCATCCGTTACAAAA+TGG | - | chr3.4:79910752-79910771 | None:intergenic | 40.0% | |
| GAAAAATGTTGAACCGGTAC+CGG | + | chr3.4:79911630-79911649 | MS.gene066824:intron | 40.0% | |
| GGTGATAGGAAGTGATATGA+AGG | + | chr3.4:79910170-79910189 | MS.gene066824:intron | 40.0% | |
| GGTGTAGTGTAGGTAACATT+TGG | - | chr3.4:79910475-79910494 | None:intergenic | 40.0% | |
| GTGCATAGAAAGGACTCAAT+TGG | + | chr3.4:79909440-79909459 | MS.gene066824:intron | 40.0% | |
| TACCAACTAGAATGCTCAGT+GGG | - | chr3.4:79909208-79909227 | None:intergenic | 40.0% | |
| TAGGACAGACGTTGAGAAAA+AGG | + | chr3.4:79910376-79910395 | MS.gene066824:intron | 40.0% | |
| TATGGAGATTATGATGGCTG+AGG | + | chr3.4:79912426-79912445 | MS.gene066824:CDS | 40.0% | |
| TATTCCCCAAAATTAGCCAG+TGG | - | chr3.4:79909252-79909271 | None:intergenic | 40.0% | |
| TGAAACCCAAAACCAGTAGA+AGG | - | chr3.4:79908232-79908251 | None:intergenic | 40.0% | |
| TGGAGCGGAATTATCTAGAA+GGG | + | chr3.4:79912066-79912085 | MS.gene066824:CDS | 40.0% | |
| TGTAACAGACCCACAGTTTA+GGG | + | chr3.4:79909141-79909160 | MS.gene066824:CDS | 40.0% | |
| TGTATCCACCAGTCAGTATT+TGG | + | chr3.4:79911418-79911437 | MS.gene066824:intron | 40.0% | |
| TGTCCTTCTAACCTACGAAT+GGG | + | chr3.4:79911234-79911253 | MS.gene066824:intron | 40.0% | |
| TTCAAGCAGATACTCTTCCT+TGG | + | chr3.4:79911712-79911731 | MS.gene066824:CDS | 40.0% | |
| TTCCATGATAGTTGGATCCA+AGG | + | chr3.4:79909854-79909873 | MS.gene066824:intron | 40.0% | |
| TTCCTTGGATCCAACTATCA+TGG | - | chr3.4:79909859-79909878 | None:intergenic | 40.0% | |
| TTGTCCTTCTAACCTACGAA+TGG | + | chr3.4:79911233-79911252 | MS.gene066824:intron | 40.0% | |
| ! | AACATTTTTCTTGGGAGAGC+AGG | - | chr3.4:79911620-79911639 | None:intergenic | 40.0% |
| ! | ATAGCATGTGTTTGGGATCA+TGG | + | chr3.4:79911174-79911193 | MS.gene066824:intron | 40.0% |
| ! | GAATGGATTTGAGTCTTCCT+TGG | - | chr3.4:79909874-79909893 | None:intergenic | 40.0% |
| ! | TAAGGAGAGCCAAAGCTTTT+AGG | + | chr3.4:79911281-79911300 | MS.gene066824:intron | 40.0% |
| ! | TCAGCTTCCCCTTTTGTTAA+TGG | - | chr3.4:79911931-79911950 | None:intergenic | 40.0% |
| ! | TCTTTTCAGCTGAAAGGATC+TGG | + | chr3.4:79912046-79912065 | MS.gene066824:intron | 40.0% |
| !! | TCATGCCACTGGCTAATTTT+GGG | + | chr3.4:79909244-79909263 | MS.gene066824:intron | 40.0% |
| !! | TGTAACGGATGCATTGGAAA+AGG | + | chr3.4:79910755-79910774 | MS.gene066824:intron | 40.0% |
| !! | TGTAGAAGAAGCACCAAAAG+CGG | - | chr3.4:79908104-79908123 | None:intergenic | 40.0% |
| !!! | CCATTTTGTAACGGATGCAT+TGG | + | chr3.4:79910749-79910768 | MS.gene066824:intron | 40.0% |
| !!! | CTATCACCTTCTACTGGTTT+TGG | + | chr3.4:79908223-79908242 | MS.gene066824:CDS | 40.0% |
| AAAAGCGGGAGTTGAAGAAG+GGG | - | chr3.4:79908089-79908108 | None:intergenic | 45.0% | |
| AAACTTGGATGTGCGTTAGG+TGG | - | chr3.4:79911208-79911227 | None:intergenic | 45.0% | |
| AACACTGCCAAGTCTTGCTA+TGG | - | chr3.4:79912386-79912405 | None:intergenic | 45.0% | |
| AACTTGGATGTGCGTTAGGT+GGG | - | chr3.4:79911207-79911226 | None:intergenic | 45.0% | |
| AATTCCGATGTTTGGGAGCA+CGG | - | chr3.4:79909568-79909587 | None:intergenic | 45.0% | |
| ACGGATGCATTGGAAAAGGA+AGG | + | chr3.4:79910759-79910778 | MS.gene066824:intron | 45.0% | |
| ATGGATGCCATAGCAAGACT+TGG | + | chr3.4:79912376-79912395 | MS.gene066824:CDS | 45.0% | |
| ATGGTCTACTTTGCGAGAAC+AGG | + | chr3.4:79912339-79912358 | MS.gene066824:intron | 45.0% | |
| ATGTTGCTAGATCATGTGGG+CGG | + | chr3.4:79909276-79909295 | MS.gene066824:intron | 45.0% | |
| CAAAAGCGGGAGTTGAAGAA+GGG | - | chr3.4:79908090-79908109 | None:intergenic | 45.0% | |
| CAAATGTCTGGCATCATTGC+AGG | - | chr3.4:79909992-79910011 | None:intergenic | 45.0% | |
| CACAAACTTGGATGTGCGTT+AGG | - | chr3.4:79911211-79911230 | None:intergenic | 45.0% | |
| CGTGTCAAGGCTAATAGCAA+TGG | + | chr3.4:79912112-79912131 | MS.gene066824:CDS | 45.0% | |
| CTACCAACTAGAATGCTCAG+TGG | - | chr3.4:79909209-79909228 | None:intergenic | 45.0% | |
| CTACTTCCTGTTCTGTTGCT+TGG | + | chr3.4:79912003-79912022 | MS.gene066824:intron | 45.0% | |
| CTGGAGCGGAATTATCTAGA+AGG | + | chr3.4:79912065-79912084 | MS.gene066824:CDS | 45.0% | |
| CTTTGGCCACAACAAGTTCA+AGG | + | chr3.4:79909346-79909365 | MS.gene066824:CDS | 45.0% | |
| GAAGGTGATGAGAATAGTGG+AGG | + | chr3.4:79911879-79911898 | MS.gene066824:intron | 45.0% | |
| GACATGGGAACCTCAGAAAA+TGG | + | chr3.4:79912448-79912467 | MS.gene066824:CDS | 45.0% | |
| GATTATGATGGCTGAGGACA+TGG | + | chr3.4:79912432-79912451 | MS.gene066824:CDS | 45.0% | |
| GGTAACTCAGCTCATCTTCT+GGG | + | chr3.4:79912139-79912158 | MS.gene066824:CDS | 45.0% | |
| GTAGCTCCATAGCCACAAAT+TGG | - | chr3.4:79909530-79909549 | None:intergenic | 45.0% | |
| GTGTAACAGACCCACAGTTT+AGG | + | chr3.4:79909140-79909159 | MS.gene066824:CDS | 45.0% | |
| TCAAACAATCCCCTCCACAA+AGG | - | chr3.4:79910898-79910917 | None:intergenic | 45.0% | |
| TCCAGTTCCATTCTCACTAG+CGG | + | chr3.4:79908324-79908343 | MS.gene066824:CDS | 45.0% | |
| TGAGAATTTGGAAACGGCGA+AGG | - | chr3.4:79908277-79908296 | None:intergenic | 45.0% | |
| TGGGTTTCAGAATTCTACGC+CGG | + | chr3.4:79908243-79908262 | MS.gene066824:CDS | 45.0% | |
| TGGTAACTCAGCTCATCTTC+TGG | + | chr3.4:79912138-79912157 | MS.gene066824:CDS | 45.0% | |
| TGTGGAGGGGATTGTTTGAT+TGG | + | chr3.4:79910899-79910918 | MS.gene066824:intron | 45.0% | |
| TTCCATCCAAGCAACAGAAC+AGG | - | chr3.4:79912012-79912031 | None:intergenic | 45.0% | |
| TTCCCACTGAGCATTCTAGT+TGG | + | chr3.4:79909203-79909222 | MS.gene066824:intron | 45.0% | |
| TTCTGCTCATCAGATGTCCA+TGG | + | chr3.4:79910052-79910071 | MS.gene066824:intron | 45.0% | |
| TTGTTGCTGCTGCTGTTGTT+GGG | - | chr3.4:79908185-79908204 | None:intergenic | 45.0% | |
| ! | AGAGAACGGTGTTGAGAAGA+GGG | - | chr3.4:79908149-79908168 | None:intergenic | 45.0% |
| ! | ATTGGAAGGGGTGCATAGAA+AGG | + | chr3.4:79909430-79909449 | MS.gene066824:intron | 45.0% |
| ! | CTGAAAGCTGGTGTTGAAGA+AGG | - | chr3.4:79908049-79908068 | None:intergenic | 45.0% |
| ! | CTTACATCTGAAACACCAGC+AGG | - | chr3.4:79909172-79909191 | None:intergenic | 45.0% |
| ! | GCAGCAGTCTTTTGCCATTA+TGG | - | chr3.4:79911391-79911410 | None:intergenic | 45.0% |
| ! | GGTTGTTGTTGAGCAGAGAA+CGG | - | chr3.4:79908163-79908182 | None:intergenic | 45.0% |
| ! | GTGCTGATAGAGAACGTCTT+TGG | + | chr3.4:79909329-79909348 | MS.gene066824:CDS | 45.0% |
| ! | TCATATGGGGTTGGGCATTT+TGG | + | chr3.4:79909776-79909795 | MS.gene066824:intron | 45.0% |
| ! | TTCCTGTTCTGTTGCTTGGA+TGG | + | chr3.4:79912007-79912026 | MS.gene066824:intron | 45.0% |
| ! | TTGCACCAAATACTGACTGG+TGG | - | chr3.4:79911426-79911445 | None:intergenic | 45.0% |
| !! | CATGCCACTGGCTAATTTTG+GGG | + | chr3.4:79909245-79909264 | MS.gene066824:intron | 45.0% |
| !! | GAAGAAGGAGTACCGAAAGT+TGG | - | chr3.4:79908034-79908053 | None:intergenic | 45.0% |
| !! | GTAGAAGAAGCACCAAAAGC+GGG | - | chr3.4:79908103-79908122 | None:intergenic | 45.0% |
| !! | GTCATGCCACTGGCTAATTT+TGG | + | chr3.4:79909243-79909262 | MS.gene066824:intron | 45.0% |
| !! | ATGTTAAATAATTATATAAA+TGG | + | chr3.4:79909930-79909949 | MS.gene066824:intron | 5.0% |
| ATCATGTGGGCGGAAGCTAT+GGG | + | chr3.4:79909286-79909305 | MS.gene066824:CDS | 50.0% | |
| CAGGCTTCACCCTAAACTGT+GGG | - | chr3.4:79909153-79909172 | None:intergenic | 50.0% | |
| CATGGAAGCTCAGTTACACC+AGG | - | chr3.4:79909841-79909860 | None:intergenic | 50.0% | |
| CCAAAAGCGGGAGTTGAAGA+AGG | - | chr3.4:79908091-79908110 | None:intergenic | 50.0% | |
| GAAGCTATGGGGAAGCTTGA+GGG | + | chr3.4:79909298-79909317 | MS.gene066824:CDS | 50.0% | |
| GAGTTAGCAGCCGCAAAGAT+TGG | + | chr3.4:79910927-79910946 | MS.gene066824:intron | 50.0% | |
| GATCGGCGTCTAATCCTTTG+TGG | + | chr3.4:79910881-79910900 | MS.gene066824:intron | 50.0% | |
| GCATTCGGCACTCCAACTTT+CGG | + | chr3.4:79908019-79908038 | MS.gene066824:CDS | 50.0% | |
| GCGTCTAATCCTTTGTGGAG+GGG | + | chr3.4:79910886-79910905 | MS.gene066824:intron | 50.0% | |
| GCTTCTTCTACACCCGCTTT+CGG | + | chr3.4:79908112-79908131 | MS.gene066824:CDS | 50.0% | |
| GGATCTTTCCCAACGCCTTA+AGG | + | chr3.4:79909375-79909394 | MS.gene066824:CDS | 50.0% | |
| GGCGTCTAATCCTTTGTGGA+GGG | + | chr3.4:79910885-79910904 | MS.gene066824:intron | 50.0% | |
| GGTAGAATCTTACCTCCTGC+AGG | - | chr3.4:79912198-79912217 | None:intergenic | 50.0% | |
| GTTGTTGCTGCTGCTGTTGT+TGG | - | chr3.4:79908186-79908205 | None:intergenic | 50.0% | |
| TATGGGGAAGCTTGAGGGTA+TGG | + | chr3.4:79909303-79909322 | MS.gene066824:CDS | 50.0% | |
| TCACGATCCGCTAGTGAGAA+TGG | - | chr3.4:79908334-79908353 | None:intergenic | 50.0% | |
| TCAGCTGAAAGGATCTGGAG+CGG | + | chr3.4:79912051-79912070 | MS.gene066824:intron | 50.0% | |
| TCCGCTAGTGAGAATGGAAC+TGG | - | chr3.4:79908328-79908347 | None:intergenic | 50.0% | |
| TCTTCCGTGCTCCCAAACAT+CGG | + | chr3.4:79909561-79909580 | MS.gene066824:intron | 50.0% | |
| TGTGGAAATGAAAGGGGGCA+TGG | - | chr3.4:79910625-79910644 | None:intergenic | 50.0% | |
| TGTTGCTGCTGCTGTTGTTG+GGG | - | chr3.4:79908184-79908203 | None:intergenic | 50.0% | |
| TTAGCAGTTCCCGTGTGTCT+AGG | - | chr3.4:79910228-79910247 | None:intergenic | 50.0% | |
| TTCTTGGGAGAGCAGGAGAA+AGG | - | chr3.4:79911613-79911632 | None:intergenic | 50.0% | |
| TTTGGAAACGGCGAAGGTTG+CGG | - | chr3.4:79908271-79908290 | None:intergenic | 50.0% | |
| ! | AAAGGGGGCATGGCATTAAC+AGG | - | chr3.4:79910615-79910634 | None:intergenic | 50.0% |
| ! | ACAGGTATTGCAGCAGCAGA+TGG | + | chr3.4:79912357-79912376 | MS.gene066824:intron | 50.0% |
| ! | AGTGCCGAATGCTGAAGATG+GGG | - | chr3.4:79908011-79908030 | None:intergenic | 50.0% |
| ! | CAGAGAACGGTGTTGAGAAG+AGG | - | chr3.4:79908150-79908169 | None:intergenic | 50.0% |
| ! | CCTTCTTCAACTCCCGCTTT+TGG | + | chr3.4:79908088-79908107 | MS.gene066824:CDS | 50.0% |
| ! | GATGAGAATAGTGGAGGCGT+TGG | + | chr3.4:79911885-79911904 | MS.gene066824:CDS | 50.0% |
| ! | GCATGTGTTTGGGATCATGG+TGG | + | chr3.4:79911177-79911196 | MS.gene066824:intron | 50.0% |
| !! | AGAATAGTGGAGGCGTTGGA+GGG | + | chr3.4:79911889-79911908 | MS.gene066824:CDS | 50.0% |
| !! | GAGTGCCGAATGCTGAAGAT+GGG | - | chr3.4:79908012-79908031 | None:intergenic | 50.0% |
| ACTCGGCGTATCTCGTGTCA+AGG | + | chr3.4:79912099-79912118 | MS.gene066824:CDS | 55.0% | |
| CGGCGTCTAATCCTTTGTGG+AGG | + | chr3.4:79910884-79910903 | MS.gene066824:intron | 55.0% | |
| CGTCGGTAACCTAGACACAC+GGG | + | chr3.4:79910216-79910235 | MS.gene066824:intron | 55.0% | |
| GAAGAACCACCACCGAAAGC+GGG | - | chr3.4:79908127-79908146 | None:intergenic | 55.0% | |
| GATCATGTGGGCGGAAGCTA+TGG | + | chr3.4:79909285-79909304 | MS.gene066824:intron | 55.0% | |
| GCAGGCTTCACCCTAAACTG+TGG | - | chr3.4:79909154-79909173 | None:intergenic | 55.0% | |
| GGAAGAACCACCACCGAAAG+CGG | - | chr3.4:79908128-79908147 | None:intergenic | 55.0% | |
| GGAAGCTATGGGGAAGCTTG+AGG | + | chr3.4:79909297-79909316 | MS.gene066824:CDS | 55.0% | |
| GGGACCCCATCTTCAGCATT+CGG | + | chr3.4:79908004-79908023 | MS.gene066824:CDS | 55.0% | |
| TCAAAGTCTGGCTGACCTGC+AGG | + | chr3.4:79912180-79912199 | MS.gene066824:CDS | 55.0% | |
| TCATGTGGGCGGAAGCTATG+GGG | + | chr3.4:79909287-79909306 | MS.gene066824:CDS | 55.0% | |
| TCTTCTACACCCGCTTTCGG+TGG | + | chr3.4:79908115-79908134 | MS.gene066824:CDS | 55.0% | |
| TGAAGATGGGGTCCCGAAGA+GGG | - | chr3.4:79907999-79908018 | None:intergenic | 55.0% | |
| ! | CAGTTTAGGGTGAAGCCTGC+TGG | + | chr3.4:79909154-79909173 | MS.gene066824:CDS | 55.0% |
| ! | GATGTTTGGGAGCACGGAAG+AGG | - | chr3.4:79909562-79909581 | None:intergenic | 55.0% |
| ! | GCGTCGGTAACCTAGACACA+CGG | + | chr3.4:79910215-79910234 | MS.gene066824:intron | 55.0% |
| !! | AAGAAGGGGTACCGAAGCCT+GGG | - | chr3.4:79908075-79908094 | None:intergenic | 55.0% |
| !! | GAGAATAGTGGAGGCGTTGG+AGG | + | chr3.4:79911888-79911907 | MS.gene066824:CDS | 55.0% |
| !! | GGAGTGCCGAATGCTGAAGA+TGG | - | chr3.4:79908013-79908032 | None:intergenic | 55.0% |
| !! | GTGTTCTGAAGCGAGACGCA+CGG | + | chr3.4:79912401-79912420 | MS.gene066824:CDS | 55.0% |
| !! | TGTTCTGAAGCGAGACGCAC+GGG | + | chr3.4:79912402-79912421 | MS.gene066824:CDS | 55.0% |
| AAGTCTGGCTGACCTGCAGG+AGG | + | chr3.4:79912183-79912202 | MS.gene066824:CDS | 60.0% | |
| ACACCAGCTTTCAGCACCCC+AGG | + | chr3.4:79908055-79908074 | MS.gene066824:CDS | 60.0% | |
| CTGAAGATGGGGTCCCGAAG+AGG | - | chr3.4:79908000-79908019 | None:intergenic | 60.0% | |
| GAAGCGAGACGCACGGGATA+TGG | + | chr3.4:79912408-79912427 | MS.gene066824:CDS | 60.0% | |
| GCTTTCAGCACCCCAGGCTT+CGG | + | chr3.4:79908061-79908080 | MS.gene066824:CDS | 60.0% | |
| TCTACACCCGCTTTCGGTGG+TGG | + | chr3.4:79908118-79908137 | MS.gene066824:CDS | 60.0% | |
| !! | AAGCCTGGGGTGCTGAAAGC+TGG | - | chr3.4:79908061-79908080 | None:intergenic | 60.0% |
| !! | AGAAGGGGTACCGAAGCCTG+GGG | - | chr3.4:79908074-79908093 | None:intergenic | 60.0% |
| !! | GAAGAAGGGGTACCGAAGCC+TGG | - | chr3.4:79908076-79908095 | None:intergenic | 60.0% |
| !! | GTGGAGGCGTTGGAGGGAAA+AGG | + | chr3.4:79911895-79911914 | MS.gene066824:CDS | 60.0% |
| AACGGCGAAGGTTGCGGCGC+CGG | - | chr3.4:79908265-79908284 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79907971 | 79912483 | 79907971 | ID=MS.gene066824 |
| chr3.4 | mRNA | 79907971 | 79912483 | 79907971 | ID=MS.gene066824.t1;Parent=MS.gene066824 |
| chr3.4 | exon | 79907971 | 79908360 | 79907971 | ID=MS.gene066824.t1.exon1;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79907971 | 79908360 | 79907971 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79908450 | 79908503 | 79908450 | ID=MS.gene066824.t1.exon2;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79908450 | 79908503 | 79908450 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79909127 | 79909186 | 79909127 | ID=MS.gene066824.t1.exon3;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79909127 | 79909186 | 79909127 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79909286 | 79909396 | 79909286 | ID=MS.gene066824.t1.exon4;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79909286 | 79909396 | 79909286 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79911538 | 79911603 | 79911538 | ID=MS.gene066824.t1.exon5;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79911538 | 79911603 | 79911538 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79911699 | 79911785 | 79911699 | ID=MS.gene066824.t1.exon6;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79911699 | 79911785 | 79911699 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79911883 | 79911984 | 79911883 | ID=MS.gene066824.t1.exon7;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79911883 | 79911984 | 79911883 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79912055 | 79912204 | 79912055 | ID=MS.gene066824.t1.exon8;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79912055 | 79912204 | 79912055 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| chr3.4 | exon | 79912361 | 79912483 | 79912361 | ID=MS.gene066824.t1.exon9;Parent=MS.gene066824.t1 |
| chr3.4 | CDS | 79912361 | 79912483 | 79912361 | ID=cds.MS.gene066824.t1;Parent=MS.gene066824.t1 |
| Gene Sequence |
| Protein sequence |
