AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052297

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052297.t1 MTR_4g075980 97.667 300 6 1 1 300 1 299 0.0 609
MS.gene052297.t1 MTR_4g134460 53.947 152 65 2 14 162 53 202 3.57e-56 187
MS.gene052297.t1 MTR_8g467490 45.771 201 89 5 4 188 1 197 1.81e-53 179
MS.gene052297.t1 MTR_6g011860 46.231 199 88 5 16 199 16 210 6.45e-53 178
MS.gene052297.t1 MTR_5g040420 43.684 190 90 3 12 188 11 196 6.61e-50 170
MS.gene052297.t1 MTR_2g093810 39.485 233 119 4 17 237 16 238 1.51e-48 164
MS.gene052297.t1 MTR_5g012080 42.289 201 104 5 17 207 9 207 1.16e-47 163
MS.gene052297.t1 MTR_2g080010 40.476 210 103 5 6 198 5 209 2.02e-47 162
MS.gene052297.t1 MTR_7g085220 43.750 192 88 4 9 180 1 192 5.89e-47 161
MS.gene052297.t1 MTR_5g090970 37.339 233 123 4 12 221 15 247 6.83e-47 160
MS.gene052297.t1 MTR_3g088110 46.386 166 77 3 9 166 1 162 2.08e-46 158
MS.gene052297.t1 MTR_5g090970 37.339 233 122 5 12 221 15 246 2.83e-45 155
MS.gene052297.t1 MTR_4g036030 36.323 223 113 6 17 213 9 228 3.03e-45 156
MS.gene052297.t1 MTR_5g041940 48.148 162 72 2 17 169 5 163 3.66e-45 154
MS.gene052297.t1 MTR_1g097300 40.306 196 107 3 15 208 19 206 4.69e-45 160
MS.gene052297.t1 MTR_5g014300 40.000 215 112 5 17 219 8 217 7.29e-45 155
MS.gene052297.t1 MTR_8g059170 49.375 160 70 3 13 164 11 167 9.36e-45 155
MS.gene052297.t1 MTR_8g063550 40.639 219 105 5 16 212 7 222 1.89e-44 154
MS.gene052297.t1 MTR_4g081870 47.561 164 74 2 17 171 11 171 1.97e-44 152
MS.gene052297.t1 MTR_2g079990 49.375 160 72 4 13 166 13 169 1.98e-44 154
MS.gene052297.t1 MTR_6g477900 44.242 165 82 3 17 174 8 169 2.08e-44 151
MS.gene052297.t1 MTR_8g063550 40.826 218 104 5 16 211 7 221 2.15e-44 156
MS.gene052297.t1 MTR_4g101680 49.007 151 68 3 17 161 9 156 2.18e-44 155
MS.gene052297.t1 MTR_8g063550 40.826 218 104 5 16 211 7 221 5.19e-44 155
MS.gene052297.t1 MTR_4g089135 42.021 188 79 4 6 164 5 191 6.95e-44 153
MS.gene052297.t1 MTR_2g064090 42.690 171 84 4 17 179 8 172 7.59e-44 153
MS.gene052297.t1 MTR_3g435150 46.552 174 79 6 4 166 1 171 7.62e-44 152
MS.gene052297.t1 MTR_3g096140 45.000 160 78 3 9 161 1 157 8.61e-44 151
MS.gene052297.t1 MTR_8g076110 46.296 162 78 4 12 167 3 161 1.12e-43 151
MS.gene052297.t1 MTR_4g035590 46.471 170 83 4 17 181 10 176 1.22e-43 152
MS.gene052297.t1 MTR_5g021710 45.283 159 78 3 12 164 5 160 1.41e-43 152
MS.gene052297.t1 MTR_3g064580 43.407 182 90 4 17 188 8 186 1.43e-43 158
MS.gene052297.t1 MTR_4g108760 44.000 175 83 5 4 166 1 172 1.44e-43 152
MS.gene052297.t1 MTR_7g100990 40.488 205 108 4 6 210 2 192 7.06e-43 150
MS.gene052297.t1 MTR_2157s0010 43.787 169 81 2 17 171 10 178 8.76e-43 148
MS.gene052297.t1 MTR_3g096140 45.000 160 78 3 9 161 1 157 1.06e-42 150
MS.gene052297.t1 MTR_8g024480 45.714 175 75 4 17 174 17 188 1.68e-42 151
MS.gene052297.t1 MTR_2g068920 38.696 230 109 6 1 204 1 224 1.81e-42 148
MS.gene052297.t1 MTR_2g062730 46.707 167 81 5 17 177 12 176 2.47e-42 149
MS.gene052297.t1 MTR_7g105170 43.605 172 77 6 17 171 6 174 2.57e-42 146
MS.gene052297.t1 MTR_5g076850 46.154 156 74 4 17 165 8 160 2.65e-42 154
MS.gene052297.t1 MTR_1g096430 46.584 161 77 3 9 163 1 158 3.34e-42 148
MS.gene052297.t1 MTR_3g116070 39.367 221 106 8 1 207 2 208 3.65e-42 149
MS.gene052297.t1 MTR_6g084430 41.463 164 90 2 17 177 7 167 4.97e-42 147
MS.gene052297.t1 MTR_3g096920 44.304 158 76 2 17 166 9 162 5.15e-42 147
MS.gene052297.t1 MTR_3g109340 45.570 158 82 2 12 166 19 175 9.76e-42 147
MS.gene052297.t1 MTR_4g098630 43.956 182 95 3 17 191 8 189 1.01e-41 147
MS.gene052297.t1 MTR_3g109340 45.283 159 82 2 12 166 19 176 1.40e-41 147
MS.gene052297.t1 MTR_2g068880 42.328 189 84 5 1 164 1 189 1.79e-41 145
MS.gene052297.t1 MTR_6g012670 44.375 160 79 2 17 169 22 178 2.74e-41 145
MS.gene052297.t1 MTR_2g079990 52.206 136 61 3 13 147 13 145 6.49e-41 146
MS.gene052297.t1 MTR_6g032770 39.320 206 109 5 7 197 9 213 2.60e-40 144
MS.gene052297.t1 MTR_1g008740 43.750 160 84 3 12 166 10 168 3.48e-40 143
MS.gene052297.t1 MTR_1g008740 43.750 160 84 3 12 166 24 182 3.95e-40 144
MS.gene052297.t1 MTR_8g094580 44.654 159 75 4 17 166 9 163 4.29e-40 141
MS.gene052297.t1 MTR_8g093580 48.366 153 69 3 16 161 7 156 4.50e-40 146
MS.gene052297.t1 MTR_2g078700 51.969 127 60 1 17 143 25 150 5.01e-40 144
MS.gene052297.t1 MTR_4g052620 39.899 198 104 5 12 196 2 197 1.40e-39 139
MS.gene052297.t1 MTR_0036s0150 46.795 156 71 5 17 164 7 158 2.50e-39 145
MS.gene052297.t1 MTR_1g090720 44.670 197 86 5 17 193 44 237 3.55e-39 143
MS.gene052297.t1 MTR_3g096920 48.062 129 63 1 17 145 9 133 4.48e-39 140
MS.gene052297.t1 MTR_1g090723 44.516 155 76 4 17 164 10 161 2.29e-38 142
MS.gene052297.t1 MTR_7g085260 43.671 158 81 3 17 166 19 176 3.32e-38 139
MS.gene052297.t1 MTR_1g090723 44.516 155 76 4 17 164 10 161 3.35e-38 142
MS.gene052297.t1 MTR_1g090723 45.513 156 74 5 17 164 10 162 4.33e-38 142
MS.gene052297.t1 MTR_7g005280 41.573 178 93 5 4 174 1 174 2.41e-37 133
MS.gene052297.t1 MTR_3g093040 37.441 211 119 5 14 216 106 311 2.90e-37 135
MS.gene052297.t1 MTR_5g069030 46.358 151 71 3 18 161 28 175 2.96e-37 140
MS.gene052297.t1 MTR_1g069805 37.895 190 103 5 17 203 12 189 4.28e-37 133
MS.gene052297.t1 MTR_7g011130 46.358 151 74 3 1 147 1 148 4.68e-37 135
MS.gene052297.t1 MTR_3g093050 45.806 155 73 4 15 161 21 172 7.06e-37 139
MS.gene052297.t1 MTR_3g070030 45.695 151 75 3 1 147 1 148 7.98e-37 134
MS.gene052297.t1 MTR_3g093050 45.806 155 73 4 15 161 21 172 8.64e-37 139
MS.gene052297.t1 MTR_2g064470 43.373 166 78 5 4 161 1 158 8.88e-37 133
MS.gene052297.t1 MTR_7g097090 42.177 147 79 3 17 160 12 155 7.59e-36 130
MS.gene052297.t1 MTR_2g086690 41.379 174 82 6 17 174 6 175 1.52e-35 129
MS.gene052297.t1 MTR_7g011120 36.893 206 119 4 9 206 1 203 2.77e-34 127
MS.gene052297.t1 MTR_2g086880 41.096 146 80 3 16 160 19 159 3.65e-34 131
MS.gene052297.t1 MTR_8g099750 49.606 127 61 2 17 143 16 139 3.90e-34 124
MS.gene052297.t1 MTR_2g086880 41.096 146 80 3 16 160 19 159 5.42e-34 130
MS.gene052297.t1 MTR_3g096140 44.203 138 67 3 31 161 2 136 2.41e-33 125
MS.gene052297.t1 MTR_3g098810 44.056 143 75 3 4 143 1 141 1.89e-30 113
MS.gene052297.t1 MTR_8g023840 43.056 144 77 4 18 158 14 155 2.25e-30 118
MS.gene052297.t1 MTR_8g023860 43.056 144 77 4 18 158 15 156 6.59e-30 117
MS.gene052297.t1 MTR_3g098810 39.429 175 90 4 4 164 1 173 8.43e-30 113
MS.gene052297.t1 MTR_8g023930 38.095 168 91 5 18 182 27 184 1.44e-27 111
MS.gene052297.t1 MTR_8g094580 46.903 113 47 4 63 166 1 109 5.38e-27 105
MS.gene052297.t1 MTR_8g023900 39.474 152 81 6 18 162 15 162 5.71e-27 110
MS.gene052297.t1 MTR_8g023900 39.456 147 84 4 18 161 196 340 2.99e-26 107
MS.gene052297.t1 MTR_3g070040 30.172 232 147 5 19 241 12 237 1.61e-24 101
MS.gene052297.t1 MTR_8g023880 39.506 162 73 8 18 161 10 164 3.58e-23 96.7
MS.gene052297.t1 MTR_4g094302 35.256 156 81 3 17 161 13 159 3.94e-23 94.4
MS.gene052297.t1 MTR_4g094302 38.583 127 69 2 17 143 13 130 3.09e-22 91.3
MS.gene052297.t1 MTR_7g070140 43.820 89 47 2 68 154 17 104 7.50e-22 89.4
MS.gene052297.t1 MTR_8g093790 35.185 162 74 8 17 173 12 147 1.18e-16 76.6
MS.gene052297.t1 MTR_7g070150 44.828 58 30 1 109 164 3 60 4.46e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052297.t1 AT2G17040 60.140 286 96 7 14 297 5 274 4.61e-112 325
MS.gene052297.t1 AT2G02450 53.642 151 65 2 14 161 50 198 3.05e-57 189
MS.gene052297.t1 AT2G02450 53.642 151 65 2 14 161 50 198 3.12e-57 189
MS.gene052297.t1 AT5G39820 58.647 133 54 1 12 144 17 148 5.97e-53 176
MS.gene052297.t1 AT1G26870 44.393 214 90 6 12 209 13 213 1.28e-49 170
MS.gene052297.t1 AT1G62700 47.771 157 73 3 17 167 9 162 7.56e-48 164
MS.gene052297.t1 AT1G62700 47.771 157 73 3 17 167 9 162 7.56e-48 164
MS.gene052297.t1 AT3G10480 51.974 152 63 3 17 161 29 177 2.84e-47 164
MS.gene052297.t1 AT3G10480 52.288 153 62 4 17 161 29 178 5.26e-47 164
MS.gene052297.t1 AT4G27410 51.266 158 68 5 13 164 11 165 2.04e-46 158
MS.gene052297.t1 AT1G69490 44.693 179 86 3 10 178 3 178 1.38e-45 155
MS.gene052297.t1 AT3G10490 49.359 156 62 5 17 161 29 178 1.62e-45 154
MS.gene052297.t1 AT2G43000 49.045 157 71 3 16 166 19 172 1.66e-45 155
MS.gene052297.t1 AT1G12260 43.915 189 84 5 17 199 9 181 1.67e-45 157
MS.gene052297.t1 AT1G01720 48.701 154 66 3 17 161 9 158 3.23e-45 155
MS.gene052297.t1 AT1G34180 44.000 175 88 3 13 185 14 180 3.25e-45 159
MS.gene052297.t1 AT3G17730 46.875 160 75 3 17 169 8 164 4.76e-45 153
MS.gene052297.t1 AT1G12260 43.915 189 84 5 17 199 9 181 4.92e-45 157
MS.gene052297.t1 AT5G04410 49.697 165 72 5 17 173 11 172 9.46e-45 160
MS.gene052297.t1 AT1G77450 39.648 227 113 6 17 228 12 229 9.96e-45 152
MS.gene052297.t1 AT3G10490 49.359 156 62 5 17 161 29 178 1.29e-44 157
MS.gene052297.t1 AT1G34180 44.000 175 88 3 13 185 14 180 1.90e-44 159
MS.gene052297.t1 AT5G08790 39.904 208 106 6 13 209 4 203 2.41e-44 152
MS.gene052297.t1 AT4G17980 50.000 154 67 4 17 161 8 160 3.08e-44 152
MS.gene052297.t1 AT4G17980 50.000 154 67 4 17 161 8 160 4.79e-44 152
MS.gene052297.t1 AT1G61110 43.478 184 84 3 17 182 18 199 4.89e-44 153
MS.gene052297.t1 AT1G65910 43.548 186 90 5 17 194 8 186 7.62e-44 158
MS.gene052297.t1 AT3G04070 46.584 161 70 3 17 162 12 171 8.16e-44 153
MS.gene052297.t1 AT1G34190 44.000 175 88 3 13 185 14 180 9.02e-44 157
MS.gene052297.t1 AT5G46590 50.327 153 66 3 17 161 8 158 1.26e-43 151
MS.gene052297.t1 AT5G61430 46.626 163 76 4 12 166 12 171 1.50e-43 152
MS.gene052297.t1 AT3G03200 43.158 190 93 4 17 198 8 190 2.24e-43 155
MS.gene052297.t1 AT3G15500 47.500 160 75 3 13 166 11 167 2.92e-43 150
MS.gene052297.t1 AT5G62380 48.344 151 69 3 17 161 9 156 3.02e-43 151
MS.gene052297.t1 AT5G62380 48.344 151 69 3 17 161 9 156 3.02e-43 151
MS.gene052297.t1 AT3G15510 37.736 212 111 4 19 214 21 227 3.79e-43 151
MS.gene052297.t1 AT4G27410 46.857 175 67 6 13 164 11 182 4.16e-43 150
MS.gene052297.t1 AT1G33060 43.350 203 95 5 9 198 12 207 5.71e-43 156
MS.gene052297.t1 AT1G33060 43.350 203 95 5 9 198 12 207 6.15e-43 156
MS.gene052297.t1 AT4G36160 49.007 151 68 4 17 161 12 159 7.01e-43 151
MS.gene052297.t1 AT4G36160 49.007 151 68 4 17 161 12 159 7.01e-43 151
MS.gene052297.t1 AT5G46590 54.545 132 56 2 17 146 8 137 9.03e-43 148
MS.gene052297.t1 AT4G36160 49.007 151 68 4 17 161 16 163 9.91e-43 151
MS.gene052297.t1 AT2G18060 43.713 167 82 4 4 164 1 161 1.25e-42 150
MS.gene052297.t1 AT2G18060 43.713 167 82 4 4 164 1 161 1.25e-42 150
MS.gene052297.t1 AT3G10500 47.097 155 72 4 17 164 11 162 1.55e-42 154
MS.gene052297.t1 AT5G39610 48.101 158 71 4 12 161 16 170 3.62e-42 147
MS.gene052297.t1 AT5G63790 43.103 174 84 4 13 175 47 216 3.88e-42 147
MS.gene052297.t1 AT1G34180 40.107 187 90 3 13 185 14 192 4.21e-42 151
MS.gene052297.t1 AT5G63790 40.000 205 103 5 13 206 57 252 4.37e-42 147
MS.gene052297.t1 AT1G52890 46.250 160 77 3 13 166 11 167 5.45e-42 147
MS.gene052297.t1 AT1G33280 46.154 156 76 3 17 167 10 162 8.42e-42 146
MS.gene052297.t1 AT4G10350 43.605 172 86 3 17 180 11 179 9.17e-42 147
MS.gene052297.t1 AT5G07680 38.723 235 124 7 12 238 13 235 1.12e-41 147
MS.gene052297.t1 AT2G46770 41.799 189 86 3 1 168 2 187 1.38e-41 147
MS.gene052297.t1 AT5G07680 38.428 229 122 6 17 238 5 221 1.61e-41 146
MS.gene052297.t1 AT5G17260 45.752 153 72 3 17 161 8 157 1.77e-41 149
MS.gene052297.t1 AT1G71930 45.695 151 73 3 17 161 11 158 2.08e-41 146
MS.gene052297.t1 AT1G71930 45.695 151 73 3 17 161 11 158 2.08e-41 146
MS.gene052297.t1 AT1G34180 40.107 187 90 3 13 185 14 192 2.16e-41 151
MS.gene052297.t1 AT2G24430 43.396 159 85 2 12 166 13 170 2.20e-41 145
MS.gene052297.t1 AT2G24430 43.396 159 85 2 12 166 13 170 2.20e-41 145
MS.gene052297.t1 AT3G15170 46.203 158 77 2 12 162 17 173 2.49e-41 145
MS.gene052297.t1 AT3G04070 42.373 177 70 3 17 162 12 187 3.02e-41 146
MS.gene052297.t1 AT3G29035 52.239 134 60 2 11 143 19 149 5.97e-41 144
MS.gene052297.t1 AT3G18400 43.506 154 80 2 17 166 7 157 1.05e-40 144
MS.gene052297.t1 AT5G18270 46.053 152 73 3 17 161 23 172 1.64e-40 144
MS.gene052297.t1 AT3G10480 43.011 186 62 5 17 161 29 211 1.65e-40 148
MS.gene052297.t1 AT5G66300 44.231 156 77 3 17 165 14 166 2.17e-40 142
MS.gene052297.t1 AT5G18270 46.053 152 73 3 17 161 23 172 2.42e-40 143
MS.gene052297.t1 AT5G09330 47.368 152 70 4 17 161 8 156 2.73e-40 147
MS.gene052297.t1 AT5G09330 47.368 152 70 4 17 161 8 156 2.73e-40 147
MS.gene052297.t1 AT5G09330 47.368 152 70 4 17 161 8 156 2.73e-40 147
MS.gene052297.t1 AT5G09330 47.368 152 70 4 17 161 8 156 2.73e-40 147
MS.gene052297.t1 AT5G09330 47.368 152 70 4 17 161 8 156 2.73e-40 147
MS.gene052297.t1 AT1G76420 44.156 154 81 2 17 166 24 176 3.02e-40 143
MS.gene052297.t1 AT1G32770 44.706 170 71 5 17 167 18 183 4.10e-40 143
MS.gene052297.t1 AT5G53950 41.584 202 106 5 13 204 15 214 5.80e-40 143
MS.gene052297.t1 AT3G04060 46.053 152 73 3 17 161 22 171 1.23e-39 142
MS.gene052297.t1 AT5G64060 46.711 152 71 4 17 161 8 156 1.98e-39 142
MS.gene052297.t1 AT3G61910 41.753 194 94 6 17 200 13 197 2.01e-39 141
MS.gene052297.t1 AT1G32510 46.386 166 76 4 17 169 8 173 6.25e-39 138
MS.gene052297.t1 AT1G52880 44.375 160 75 2 19 164 21 180 6.31e-39 139
MS.gene052297.t1 AT1G79580 48.387 155 73 3 17 166 19 171 9.14e-39 140
MS.gene052297.t1 AT1G79580 48.387 155 73 3 17 166 19 171 9.14e-39 140
MS.gene052297.t1 AT1G79580 48.387 155 73 3 17 166 19 171 9.14e-39 140
MS.gene052297.t1 AT1G79580 48.387 155 73 3 17 166 19 171 9.14e-39 140
MS.gene052297.t1 AT1G79580 48.387 155 73 3 17 166 19 171 9.14e-39 140
MS.gene052297.t1 AT3G44350 40.206 194 97 7 18 198 8 195 1.05e-38 137
MS.gene052297.t1 AT5G22380 38.660 194 103 6 12 192 3 193 2.41e-38 135
MS.gene052297.t1 AT3G12910 41.379 174 82 4 12 166 18 190 4.75e-38 137
MS.gene052297.t1 AT4G35580 46.452 155 72 4 15 161 8 159 4.96e-38 141
MS.gene052297.t1 AT4G35580 46.452 155 72 4 15 161 8 159 5.83e-38 141
MS.gene052297.t1 AT4G35580 46.452 155 72 4 15 161 8 159 6.39e-38 141
MS.gene052297.t1 AT1G56010 38.500 200 111 5 17 207 21 217 9.47e-38 136
MS.gene052297.t1 AT5G24590 43.784 185 90 5 15 191 12 190 3.14e-37 137
MS.gene052297.t1 AT3G49530 42.222 180 93 5 15 186 12 188 6.43e-37 136
MS.gene052297.t1 AT5G04395 45.395 152 70 1 8 146 21 172 9.00e-37 130
MS.gene052297.t1 AT1G54330 46.309 149 73 3 17 161 8 153 1.01e-36 133
MS.gene052297.t1 AT5G13180 47.651 149 70 3 17 161 16 160 1.26e-36 131
MS.gene052297.t1 AT3G49530 42.222 180 93 5 15 186 12 188 1.46e-36 136
MS.gene052297.t1 AT3G12977 42.857 154 79 3 17 164 20 170 2.10e-36 132
MS.gene052297.t1 AT5G22290 38.220 191 108 4 15 199 21 207 4.17e-36 132
MS.gene052297.t1 AT2G33480 46.358 151 72 3 17 164 17 161 7.98e-36 130
MS.gene052297.t1 AT4G28530 42.169 166 72 5 17 162 12 173 9.02e-36 132
MS.gene052297.t1 AT2G33480 45.752 153 72 4 17 164 17 163 5.77e-35 127
MS.gene052297.t1 AT1G32870 49.045 157 66 4 17 164 12 163 6.32e-34 130
MS.gene052297.t1 AT1G32870 49.045 157 66 4 17 164 12 163 6.48e-34 130
MS.gene052297.t1 AT1G32870 49.045 157 66 4 17 164 48 199 1.15e-33 129
MS.gene052297.t1 AT3G44350 44.604 139 66 4 18 149 8 142 3.74e-33 120
MS.gene052297.t1 AT4G01550 44.444 153 76 4 16 162 5 154 5.20e-33 126
MS.gene052297.t1 AT2G27300 39.597 149 82 4 16 162 15 157 2.85e-32 122
MS.gene052297.t1 AT3G44290 40.816 147 81 3 15 160 14 155 9.96e-32 118
MS.gene052297.t1 AT3G44290 40.816 147 81 3 15 160 14 155 4.76e-31 119
MS.gene052297.t1 AT4G01520 38.961 154 90 3 18 167 7 160 7.01e-30 115
MS.gene052297.t1 AT1G56010 51.376 109 42 4 63 163 1 106 1.72e-29 113
MS.gene052297.t1 AT5G61430 48.649 111 47 3 63 166 1 108 3.40e-29 112
MS.gene052297.t1 AT4G01540 39.103 156 91 3 16 167 5 160 1.52e-28 114
MS.gene052297.t1 AT4G01540 39.103 156 91 3 16 167 5 160 2.55e-28 112
MS.gene052297.t1 AT4G01540 39.103 156 91 3 16 167 5 160 3.19e-28 113
MS.gene052297.t1 AT4G01540 39.103 156 91 3 16 167 5 160 3.30e-28 112
MS.gene052297.t1 AT4G10350 44.068 118 58 2 68 180 18 132 1.09e-27 109
MS.gene052297.t1 AT3G12977 48.077 104 45 3 64 161 14 114 1.21e-27 107
MS.gene052297.t1 AT5G64530 35.088 171 88 4 17 177 5 162 1.57e-22 92.8
MS.gene052297.t1 AT2G33480 45.098 102 48 3 68 164 8 106 2.16e-22 93.2
MS.gene052297.t1 AT5G64530 39.535 129 65 3 17 145 5 120 2.73e-22 91.3
MS.gene052297.t1 AT1G02250 38.000 150 85 4 18 162 6 152 9.23e-22 94.4
MS.gene052297.t1 AT1G02230 33.533 167 99 5 18 177 6 167 1.98e-20 90.5
MS.gene052297.t1 AT3G04420 31.138 167 108 3 18 180 6 169 4.31e-19 85.9
MS.gene052297.t1 AT1G01010 34.706 170 92 7 18 174 6 169 9.31e-19 86.3
MS.gene052297.t1 AT3G04420 31.138 167 108 3 18 180 6 169 1.24e-18 85.1
MS.gene052297.t1 AT2G43000 44.792 96 44 3 77 166 2 94 3.92e-18 81.3
MS.gene052297.t1 AT4G28530 38.938 113 48 3 17 112 12 120 1.32e-17 82.0
MS.gene052297.t1 AT2G18060 47.297 74 33 2 94 164 3 73 9.52e-17 79.0
MS.gene052297.t1 AT3G04430 41.739 115 50 6 21 127 6 111 2.08e-16 76.6
MS.gene052297.t1 AT3G56530 34.395 157 93 5 10 159 46 199 6.32e-16 77.4
MS.gene052297.t1 AT1G02220 33.103 145 87 4 18 158 6 144 1.68e-15 76.6
MS.gene052297.t1 AT3G10490 46.988 83 29 4 88 161 2 78 2.23e-15 75.9
MS.gene052297.t1 AT3G10490 46.988 83 29 4 88 161 2 78 2.23e-15 75.9
MS.gene052297.t1 AT3G55210 31.928 166 95 6 17 167 13 175 2.39e-15 75.1
MS.gene052297.t1 AT5G14000 32.812 128 79 3 18 143 18 140 5.36e-15 71.6
MS.gene052297.t1 AT5G22290 36.036 111 62 3 94 199 2 108 5.78e-15 73.2
MS.gene052297.t1 AT5G14000 28.902 173 111 6 14 179 13 180 1.02e-14 72.0
MS.gene052297.t1 AT5G50820 31.217 189 105 7 17 197 19 190 2.48e-13 67.8

Find 76 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGACCCAAGATACATTT+TGG 0.198299 4.2:-33122197 MS.gene052297:CDS
TCATGTTCAGATTCTTTCTT+AGG 0.221095 4.2:+33122360 None:intergenic
TGATTTCTATCTTAAGAATA+TGG 0.228122 4.2:-33124307 MS.gene052297:CDS
GCACAACTGAGAAAGGTTTC+TGG 0.285017 4.2:-33123993 MS.gene052297:CDS
AATGACTTGTTGAAACAATA+AGG 0.289381 4.2:+33122383 None:intergenic
GTCTTGTTGTGTGTAGTTAA+AGG 0.331878 4.2:+33122422 None:intergenic
CCGGAAAATCGTGACGTTAT+CGG 0.347516 4.2:-33123953 MS.gene052297:CDS
ACTGAACAAATTACACTTCC+AGG 0.347917 4.2:-33124363 MS.gene052297:CDS
ATAGTCCTTGGCTACAAAAC+TGG 0.348323 4.2:-33122164 MS.gene052297:CDS
TCGGATCCGAAACGCATAAT+CGG 0.363961 4.2:-33123934 MS.gene052297:CDS
AATTGTGAAAGATAATAAAA+AGG 0.367531 4.2:-33122292 MS.gene052297:CDS
CTCAACCCGATTATGCGTTT+CGG 0.375306 4.2:+33123928 None:intergenic
TATATAGGTTTGTCAAAGGT+TGG 0.383447 4.2:-33124081 MS.gene052297:intron
GAAGAAGGTGGGGAAGATGT+AGG 0.386986 4.2:+33122462 None:intergenic
AAGAAGGTGGGGAAGATGTA+GGG 0.391402 4.2:+33122463 None:intergenic
AAACTTCGTTATGATGTCAT+TGG 0.391717 4.2:-33124273 MS.gene052297:CDS
ATATAGGTTTGTCAAAGGTT+GGG 0.396654 4.2:-33124080 MS.gene052297:intron
ACATCTTTGCAATTGCCCTT+AGG 0.396815 4.2:-33122261 MS.gene052297:CDS
CATCTTTGCAATTGCCCTTA+GGG 0.400405 4.2:-33122260 MS.gene052297:CDS
GCTATAGGTAACTGAAGTTC+AGG 0.401665 4.2:+33122225 None:intergenic
GGGCTCAGCTTAATAGTCCT+TGG 0.407233 4.2:-33122176 MS.gene052297:CDS
CAAGAGGAACCAAGACTGAT+TGG 0.409549 4.2:-33123873 MS.gene052297:CDS
CCTTTCTCAGTTGTGCGATT+AGG 0.410304 4.2:+33124000 None:intergenic
CAATCAGTCTTGGTTCCTCT+TGG 0.413050 4.2:+33123874 None:intergenic
GCTGAGCCCAAAATGTATCT+TGG 0.418008 4.2:+33122190 None:intergenic
TATCTTAAGAATATGGTTGT+TGG 0.419156 4.2:-33124300 MS.gene052297:CDS
TTGATTATATATGGCATCAA+TGG 0.441959 4.2:-33124403 None:intergenic
CGGATCCGAAACGCATAATC+GGG 0.449323 4.2:-33123933 MS.gene052297:CDS
TATAGGTTTGTCAAAGGTTG+GGG 0.462857 4.2:-33124079 MS.gene052297:intron
CTGAGCCCAAAATGTATCTT+GGG 0.464405 4.2:+33122191 None:intergenic
AGTTACCTATAGCTGCAGAT+TGG 0.469574 4.2:-33122215 MS.gene052297:CDS
TTAGGCAAGGGGCTATTGTC+AGG 0.479868 4.2:+33123829 None:intergenic
CCTAATCGCACAACTGAGAA+AGG 0.487326 4.2:-33124000 MS.gene052297:CDS
ATTCATAACCCAATCAGTCT+TGG 0.489277 4.2:+33123864 None:intergenic
AGGTACATTGTCCTTCCCTA+AGG 0.489812 4.2:+33122245 None:intergenic
ATGACTTGTTGAAACAATAA+GGG 0.490222 4.2:+33122384 None:intergenic
GTGGGGTGAAATCTGAATCC+TGG 0.490756 4.2:+33124345 None:intergenic
TTCCCCACCTTCTTCCTCTA+CGG 0.492417 4.2:-33122454 MS.gene052297:CDS
AGAAGAAGAGATGAAACAAA+TGG 0.498288 4.2:-33122493 MS.gene052297:CDS
TGGGTCCAATCTGCAGCTAT+AGG 0.498639 4.2:+33122210 None:intergenic
TCAAGGAGTTCTTCTTCTGT+GGG 0.500082 4.2:+33124327 None:intergenic
AAGAGGAACCAAGACTGATT+GGG 0.506930 4.2:-33123872 MS.gene052297:CDS
TATTCTTAAGATAGAAATCA+AGG 0.507383 4.2:+33124310 None:intergenic
CAAAGGTTGGGGAAAGAGAA+TGG 0.507736 4.2:-33124068 MS.gene052297:CDS
ATCAAGGAGTTCTTCTTCTG+TGG 0.511582 4.2:+33124326 None:intergenic
AGGGGCTATTGTCAGGTAAA+CGG 0.514663 4.2:+33123836 None:intergenic
CATGATCCTTGTGACTTGCC+AGG 0.515932 4.2:-33124231 MS.gene052297:intron
AGAAGGTGGGGAAGATGTAG+GGG 0.520080 4.2:+33122464 None:intergenic
TGACAATAGCCCCTTGCCTA+AGG 0.525791 4.2:-33123827 MS.gene052297:intron
ATTATGCAAGATATATAGAA+AGG 0.533180 4.2:-33122553 MS.gene052297:CDS
TTTCTGGAAAGCCACCGGTT+CGG 0.534834 4.2:-33123977 MS.gene052297:CDS
CTGGCAAGTCACAAGGATCA+TGG 0.537753 4.2:+33124232 None:intergenic
AGAAGAGATGAAACAAATGG+TGG 0.549954 4.2:-33122490 MS.gene052297:CDS
TTTGCAATTGCCCTTAGGGA+AGG 0.552390 4.2:-33122256 MS.gene052297:CDS
GGAAAGCCACCGGTTCGGAC+CGG 0.552889 4.2:-33123972 MS.gene052297:CDS
ATATACAATACCTTAGGCAA+GGG 0.556768 4.2:+33123817 None:intergenic
ATGATATATAGGTTTGTCAA+AGG 0.562913 4.2:-33124085 MS.gene052297:intron
TATATACAATACCTTAGGCA+AGG 0.566468 4.2:+33123816 None:intergenic
AAAGGTTTCTGGAAAGCCAC+CGG 0.569247 4.2:-33123982 MS.gene052297:CDS
GGTACATTGTCCTTCCCTAA+GGG 0.570401 4.2:+33122246 None:intergenic
CGAAACGCATAATCGGGTTG+AGG 0.590544 4.2:-33123927 MS.gene052297:CDS
ATTATATATGGCATCAATGG+AGG 0.593615 4.2:-33124400 None:intergenic
AATAATTAAAACTGAAGACA+TGG 0.594981 4.2:-33122337 MS.gene052297:CDS
GTCCGTAGAGGAAGAAGGTG+GGG 0.607988 4.2:+33122452 None:intergenic
GTGTCCGTAGAGGAAGAAGG+TGG 0.609803 4.2:+33122450 None:intergenic
ATAAGGGCATGGACACGTGT+TGG 0.615885 4.2:+33122400 None:intergenic
GAAGAGATGAAACAAATGGT+GGG 0.618089 4.2:-33122489 MS.gene052297:CDS
AATCGGGTTGAGGAAGACGT+TGG 0.622308 4.2:-33123917 MS.gene052297:CDS
ATTGTGTCCGTAGAGGAAGA+AGG 0.636049 4.2:+33122447 None:intergenic
AAAGGAGATTGTGTCCGTAG+AGG 0.637647 4.2:+33122440 None:intergenic
TGTCCGTAGAGGAAGAAGGT+GGG 0.638792 4.2:+33122451 None:intergenic
TTGTTGAAACAATAAGGGCA+TGG 0.638825 4.2:+33122389 None:intergenic
ACTATACCTGGCAAGTCACA+AGG 0.654035 4.2:+33124225 None:intergenic
TATACAATACCTTAGGCAAG+GGG 0.661978 4.2:+33123818 None:intergenic
CAAGGAGTTCTTCTTCTGTG+GGG 0.678001 4.2:+33124328 None:intergenic
TATGAGGGAAGAGCTCCAAG+AGG 0.740807 4.2:-33123889 MS.gene052297:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTATATATAATTGAATGA+AGG + chr4.2:33123508-33123527 None:intergenic 15.0%
!! AATTGTGAAAGATAATAAAA+AGG - chr4.2:33124235-33124254 MS.gene052297:CDS 15.0%
!! CATTCAATGTAAAAAAAAAT+GGG - chr4.2:33123158-33123177 MS.gene052297:intron 15.0%
!! TCATTCAATGTAAAAAAAAA+TGG - chr4.2:33123157-33123176 MS.gene052297:intron 15.0%
!! TTCAAATTAAATTAATGTCT+AGG + chr4.2:33122373-33122392 None:intergenic 15.0%
!!! TTTTTTTTTACATTGAATGA+AGG + chr4.2:33123157-33123176 None:intergenic 15.0%
!! AAAAATACTAATATATGCCA+TGG - chr4.2:33123929-33123948 MS.gene052297:CDS 20.0%
!! AATAATTAAAACTGAAGACA+TGG - chr4.2:33124190-33124209 MS.gene052297:intron 20.0%
!! AGATATATATACAATACCTT+AGG + chr4.2:33122719-33122738 None:intergenic 20.0%
!! ATTATGCAAGATATATAGAA+AGG - chr4.2:33123974-33123993 MS.gene052297:CDS 20.0%
!! ATTCATAGTTAAAGCTTATA+TGG + chr4.2:33122834-33122853 None:intergenic 20.0%
!! CAAACATAAACTAATGAAAT+TGG - chr4.2:33123875-33123894 MS.gene052297:CDS 20.0%
!! TATTCTTAAGATAGAAATCA+AGG + chr4.2:33122220-33122239 None:intergenic 20.0%
!! TGATTTCTATCTTAAGAATA+TGG - chr4.2:33122220-33122239 MS.gene052297:CDS 20.0%
!!! ATATAAGCTTTAACTATGAA+TGG - chr4.2:33122833-33122852 MS.gene052297:intron 20.0%
!!! TGTTTATTTTAGTCACAAAT+TGG - chr4.2:33123635-33123654 MS.gene052297:intron 20.0%
!!! TTTTTACTTTTTTCACAAGA+GGG - chr4.2:33123608-33123627 MS.gene052297:intron 20.0%
!!! TTTTTTACTTTTTTCACAAG+AGG - chr4.2:33123607-33123626 MS.gene052297:intron 20.0%
! AAAAAGATTCCCATGTTATT+TGG + chr4.2:33123592-33123611 None:intergenic 25.0%
! AAAGATAATAAAAAGGCTTG+TGG - chr4.2:33124242-33124261 MS.gene052297:CDS 25.0%
! AATTAGTTGCAAGTCTTAAT+TGG + chr4.2:33123829-33123848 None:intergenic 25.0%
! ACCAAAAATATACTACAGAA+TGG + chr4.2:33122781-33122800 None:intergenic 25.0%
! AGTTAAAGCTTATATGGTTA+TGG + chr4.2:33122828-33122847 None:intergenic 25.0%
! ATGATATATAGGTTTGTCAA+AGG - chr4.2:33122442-33122461 MS.gene052297:CDS 25.0%
! CAATGTAAAAAAAAATGGGA+AGG - chr4.2:33123162-33123181 MS.gene052297:intron 25.0%
! CCAAAAATATACTACAGAAT+GGG + chr4.2:33122780-33122799 None:intergenic 25.0%
! GTAACACATAATATGATACT+AGG + chr4.2:33122343-33122362 None:intergenic 25.0%
! TAACCCTTTGATATATATCA+CGG - chr4.2:33123094-33123113 MS.gene052297:intron 25.0%
! TATCTTAAGAATATGGTTGT+TGG - chr4.2:33122227-33122246 MS.gene052297:CDS 25.0%
!! AAAAGATTCCCATGTTATTT+GGG + chr4.2:33123591-33123610 None:intergenic 25.0%
!! AGCTAGGAGTTAATTTTTAT+AGG - chr4.2:33123661-33123680 MS.gene052297:intron 25.0%
!! GAATGTTTTGCATGATATAT+AGG - chr4.2:33122431-33122450 MS.gene052297:CDS 25.0%
!!! AATGACTTGTTGAAACAATA+AGG + chr4.2:33124147-33124166 None:intergenic 25.0%
!!! ATGACTTGTTGAAACAATAA+GGG + chr4.2:33124146-33124165 None:intergenic 25.0%
AAACAAACATGACACTTCAT+AGG - chr4.2:33123466-33123485 MS.gene052297:intron 30.0%
AAACCCGTGATATATATCAA+AGG + chr4.2:33123101-33123120 None:intergenic 30.0%
AAACTTCGTTATGATGTCAT+TGG - chr4.2:33122254-33122273 MS.gene052297:CDS 30.0%
AAAGAAACGAAAGGTTCATA+AGG + chr4.2:33123794-33123813 None:intergenic 30.0%
AAATTTCCATGAAGATAGCT+AGG - chr4.2:33123732-33123751 MS.gene052297:intron 30.0%
AACCCGTGATATATATCAAA+GGG + chr4.2:33123100-33123119 None:intergenic 30.0%
AACCCTATATCAAAATCACA+TGG + chr4.2:33122885-33122904 None:intergenic 30.0%
AACCCTTTGATATATATCAC+GGG - chr4.2:33123095-33123114 MS.gene052297:intron 30.0%
AAGAAACGAAAGGTTCATAA+GGG + chr4.2:33123793-33123812 None:intergenic 30.0%
ACACCTTCATAAAAAGTAGT+TGG + chr4.2:33122976-33122995 None:intergenic 30.0%
ACCCTATATCAAAATCACAT+GGG + chr4.2:33122884-33122903 None:intergenic 30.0%
AGAAGAAGAGATGAAACAAA+TGG - chr4.2:33124034-33124053 MS.gene052297:CDS 30.0%
ATAAAAGACACCTTCACAAA+AGG + chr4.2:33122921-33122940 None:intergenic 30.0%
ATATACAATACCTTAGGCAA+GGG + chr4.2:33122713-33122732 None:intergenic 30.0%
ATATAGGTTTGTCAAAGGTT+GGG - chr4.2:33122447-33122466 MS.gene052297:CDS 30.0%
TATATACAATACCTTAGGCA+AGG + chr4.2:33122714-33122733 None:intergenic 30.0%
TATATAGGTTTGTCAAAGGT+TGG - chr4.2:33122446-33122465 MS.gene052297:CDS 30.0%
TCAATTAGTCATCGTATGAT+AGG + chr4.2:33122805-33122824 None:intergenic 30.0%
TCATGTTCAGATTCTTTCTT+AGG + chr4.2:33124170-33124189 None:intergenic 30.0%
TTCATCATGAAAGAAACGAA+AGG + chr4.2:33123803-33123822 None:intergenic 30.0%
! ATGATATGCTTGCTTTGTTA+TGG - chr4.2:33123556-33123575 MS.gene052297:intron 30.0%
! CCCATTCTGTAGTATATTTT+TGG - chr4.2:33122777-33122796 MS.gene052297:intron 30.0%
! TTCTTTCTGTACAAGTATTG+TGG - chr4.2:33123765-33123784 MS.gene052297:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG - chr4.2:33122970-33122989 MS.gene052297:intron 30.0%
!!! GAAGTGTCATGTTTGTTTTT+TGG + chr4.2:33123464-33123483 None:intergenic 30.0%
!!! GTTTTTTGGTTTTAACCCTT+TGG + chr4.2:33123450-33123469 None:intergenic 30.0%
AAAGTGAAAATCACACCTTG+AGG - chr4.2:33123019-33123038 MS.gene052297:intron 35.0%
ACTGAACAAATTACACTTCC+AGG - chr4.2:33122164-33122183 MS.gene052297:CDS 35.0%
AGAAACGAAAGGTTCATAAG+GGG + chr4.2:33123792-33123811 None:intergenic 35.0%
AGAAGAGATGAAACAAATGG+TGG - chr4.2:33124037-33124056 MS.gene052297:CDS 35.0%
ATTCATAACCCAATCAGTCT+TGG + chr4.2:33122666-33122685 None:intergenic 35.0%
CACCTTCATAAAAAGTAGTG+TGG + chr4.2:33123064-33123083 None:intergenic 35.0%
CAGATTCTCCCAAATAACAT+GGG - chr4.2:33123580-33123599 MS.gene052297:intron 35.0%
CATATCTCTCTTACATGGAA+GGG - chr4.2:33123709-33123728 MS.gene052297:intron 35.0%
GAAGAGATGAAACAAATGGT+GGG - chr4.2:33124038-33124057 MS.gene052297:CDS 35.0%
TATACAATACCTTAGGCAAG+GGG + chr4.2:33122712-33122731 None:intergenic 35.0%
TATAGGTTTGTCAAAGGTTG+GGG - chr4.2:33122448-33122467 MS.gene052297:CDS 35.0%
TGATTGATTAGCACTATACC+TGG + chr4.2:33122317-33122336 None:intergenic 35.0%
TTGTTGAAACAATAAGGGCA+TGG + chr4.2:33124141-33124160 None:intergenic 35.0%
TTTCACTTGAAATCGAACTC+AGG + chr4.2:33123343-33123362 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG - chr4.2:33122908-33122927 MS.gene052297:intron 35.0%
! ATTGGACCCAAGATACATTT+TGG - chr4.2:33124330-33124349 MS.gene052297:CDS 35.0%
! GTCTTGTTGTGTGTAGTTAA+AGG + chr4.2:33124108-33124127 None:intergenic 35.0%
! TTGGACCCAAGATACATTTT+GGG - chr4.2:33124331-33124350 MS.gene052297:CDS 35.0%
! TTTTATCAAGTCACACCTCA+AGG + chr4.2:33123037-33123056 None:intergenic 35.0%
!! GCCCATGTGATTTTGATATA+GGG - chr4.2:33122880-33122899 MS.gene052297:intron 35.0%
!! TGCCCATGTGATTTTGATAT+AGG - chr4.2:33122879-33122898 MS.gene052297:intron 35.0%
!!! AAGACGTTGGTTTTCTATGA+GGG - chr4.2:33122623-33122642 MS.gene052297:intron 35.0%
!!! AATGGTATTTTTTCGTGCCA+AGG - chr4.2:33122477-33122496 MS.gene052297:CDS 35.0%
!!! ATGGTATTTTTTCGTGCCAA+GGG - chr4.2:33122478-33122497 MS.gene052297:CDS 35.0%
!!! CACCACACTACTTTTTATGA+AGG - chr4.2:33123059-33123078 MS.gene052297:intron 35.0%
AAGAGGAACCAAGACTGATT+GGG - chr4.2:33122655-33122674 MS.gene052297:intron 40.0%
ACATCTTTGCAATTGCCCTT+AGG - chr4.2:33124266-33124285 MS.gene052297:CDS 40.0%
ACCAAGTGATTGAACTCAAG+TGG - chr4.2:33123280-33123299 MS.gene052297:intron 40.0%
ACCACTTGAGTTCAATCACT+TGG + chr4.2:33123284-33123303 None:intergenic 40.0%
ACGTGCATATCTCTCTTACA+TGG - chr4.2:33123704-33123723 MS.gene052297:intron 40.0%
AGGGACAAAAAACATGGTAG+TGG - chr4.2:33122497-33122516 MS.gene052297:CDS 40.0%
AGTTACCTATAGCTGCAGAT+TGG - chr4.2:33124312-33124331 MS.gene052297:CDS 40.0%
ATAGTCCTTGGCTACAAAAC+TGG - chr4.2:33124363-33124382 MS.gene052297:CDS 40.0%
ATCAAGGAGTTCTTCTTCTG+TGG + chr4.2:33122204-33122223 None:intergenic 40.0%
CATCTTTGCAATTGCCCTTA+GGG - chr4.2:33124267-33124286 MS.gene052297:CDS 40.0%
CCAGATTCTCCCAAATAACA+TGG - chr4.2:33123579-33123598 MS.gene052297:intron 40.0%
CTCGAACAATTCGTTCTATG+AGG + chr4.2:33123316-33123335 None:intergenic 40.0%
CTGAGCCCAAAATGTATCTT+GGG + chr4.2:33124339-33124358 None:intergenic 40.0%
GCATATCTCTCTTACATGGA+AGG - chr4.2:33123708-33123727 MS.gene052297:intron 40.0%
GCTATAGGTAACTGAAGTTC+AGG + chr4.2:33124305-33124324 None:intergenic 40.0%
GGAAAATGATCCTGGTAATC+GGG + chr4.2:33123406-33123425 None:intergenic 40.0%
GGGAAAATGATCCTGGTAAT+CGG + chr4.2:33123407-33123426 None:intergenic 40.0%
TCAAGGAGTTCTTCTTCTGT+GGG + chr4.2:33122203-33122222 None:intergenic 40.0%
TCACTACCTAGCTATCTTCA+TGG + chr4.2:33123741-33123760 None:intergenic 40.0%
! CCATGTTATTTGGGAGAATC+TGG + chr4.2:33123582-33123601 None:intergenic 40.0%
!! AAAAACATGGTAGTGGAGGA+AGG - chr4.2:33122504-33122523 MS.gene052297:CDS 40.0%
!! AGTCACAAATTGGACTAGCT+AGG - chr4.2:33123645-33123664 MS.gene052297:intron 40.0%
!! GACAAAAAACATGGTAGTGG+AGG - chr4.2:33122500-33122519 MS.gene052297:CDS 40.0%
!!! CTACCATGTTTTTTGTCCCT+TGG + chr4.2:33122497-33122516 None:intergenic 40.0%
!!! GAAGACGTTGGTTTTCTATG+AGG - chr4.2:33122622-33122641 MS.gene052297:intron 40.0%
AAAGGAGATTGTGTCCGTAG+AGG + chr4.2:33124090-33124109 None:intergenic 45.0%
AACCCTTTGGATTACGAGTC+CGG + chr4.2:33123437-33123456 None:intergenic 45.0%
AACCGGACTCGTAATCCAAA+GGG - chr4.2:33123432-33123451 MS.gene052297:intron 45.0%
AAGAAGGTGGGGAAGATGTA+GGG + chr4.2:33124067-33124086 None:intergenic 45.0%
ACTATACCTGGCAAGTCACA+AGG + chr4.2:33122305-33122324 None:intergenic 45.0%
AGGGGCTATTGTCAGGTAAA+CGG + chr4.2:33122694-33122713 None:intergenic 45.0%
AGGTACATTGTCCTTCCCTA+AGG + chr4.2:33124285-33124304 None:intergenic 45.0%
ATTGTGTCCGTAGAGGAAGA+AGG + chr4.2:33124083-33124102 None:intergenic 45.0%
CAAAGGTTGGGGAAAGAGAA+TGG - chr4.2:33122459-33122478 MS.gene052297:CDS 45.0%
CAAGAGGAACCAAGACTGAT+TGG - chr4.2:33122654-33122673 MS.gene052297:intron 45.0%
CAAGGAGTTCTTCTTCTGTG+GGG + chr4.2:33122202-33122221 None:intergenic 45.0%
CAATCAGTCTTGGTTCCTCT+TGG + chr4.2:33122656-33122675 None:intergenic 45.0%
CCGGAAAATCGTGACGTTAT+CGG - chr4.2:33122574-33122593 MS.gene052297:intron 45.0%
CCTAATCGCACAACTGAGAA+AGG - chr4.2:33122527-33122546 MS.gene052297:CDS 45.0%
CCTTTCTCAGTTGTGCGATT+AGG + chr4.2:33122530-33122549 None:intergenic 45.0%
CTCAACCCGATTATGCGTTT+CGG + chr4.2:33122602-33122621 None:intergenic 45.0%
GCACAACTGAGAAAGGTTTC+TGG - chr4.2:33122534-33122553 MS.gene052297:CDS 45.0%
GCTGAGCCCAAAATGTATCT+TGG + chr4.2:33124340-33124359 None:intergenic 45.0%
GGTACATTGTCCTTCCCTAA+GGG + chr4.2:33124284-33124303 None:intergenic 45.0%
GTGCCAAGGGACAAAAAACA+TGG - chr4.2:33122491-33122510 MS.gene052297:CDS 45.0%
TCGGATCCGAAACGCATAAT+CGG - chr4.2:33122593-33122612 MS.gene052297:intron 45.0%
TTCCTAGGGGAAAATGATCC+TGG + chr4.2:33123414-33123433 None:intergenic 45.0%
TTTGCAATTGCCCTTAGGGA+AGG - chr4.2:33124271-33124290 MS.gene052297:CDS 45.0%
! AAAGGTTTCTGGAAAGCCAC+CGG - chr4.2:33122545-33122564 MS.gene052297:CDS 45.0%
! CCGATAACGTCACGATTTTC+CGG + chr4.2:33122577-33122596 None:intergenic 45.0%
! GATCATTTTCCCCTAGGAAC+CGG - chr4.2:33123415-33123434 MS.gene052297:intron 45.0%
! TACCAGGATCATTTTCCCCT+AGG - chr4.2:33123409-33123428 MS.gene052297:intron 45.0%
AGAAGGTGGGGAAGATGTAG+GGG + chr4.2:33124066-33124085 None:intergenic 50.0%
ATTACGAGTCCGGTTCCTAG+GGG + chr4.2:33123427-33123446 None:intergenic 50.0%
CGGATCCGAAACGCATAATC+GGG - chr4.2:33122594-33122613 MS.gene052297:intron 50.0%
CTACCAAACTCCCGATTACC+AGG - chr4.2:33123393-33123412 MS.gene052297:intron 50.0%
CTGGCAAGTCACAAGGATCA+TGG + chr4.2:33122298-33122317 None:intergenic 50.0%
GAACCGGACTCGTAATCCAA+AGG - chr4.2:33123431-33123450 MS.gene052297:intron 50.0%
GAAGAAGGTGGGGAAGATGT+AGG + chr4.2:33124068-33124087 None:intergenic 50.0%
GATCCTGGTAATCGGGAGTT+TGG + chr4.2:33123399-33123418 None:intergenic 50.0%
GATTACGAGTCCGGTTCCTA+GGG + chr4.2:33123428-33123447 None:intergenic 50.0%
GGGCTCAGCTTAATAGTCCT+TGG - chr4.2:33124351-33124370 MS.gene052297:CDS 50.0%
GTCCTGTCACATACGTACCA+TGG + chr4.2:33123949-33123968 None:intergenic 50.0%
GTGGGGTGAAATCTGAATCC+TGG + chr4.2:33122185-33122204 None:intergenic 50.0%
TATGAGGGAAGAGCTCCAAG+AGG - chr4.2:33122638-33122657 MS.gene052297:intron 50.0%
TGACAATAGCCCCTTGCCTA+AGG - chr4.2:33122700-33122719 MS.gene052297:intron 50.0%
TGCCATGGTACGTATGTGAC+AGG - chr4.2:33123944-33123963 MS.gene052297:CDS 50.0%
TGGGTCCAATCTGCAGCTAT+AGG + chr4.2:33124320-33124339 None:intergenic 50.0%
TGTCCGTAGAGGAAGAAGGT+GGG + chr4.2:33124079-33124098 None:intergenic 50.0%
TTAGGCAAGGGGCTATTGTC+AGG + chr4.2:33122701-33122720 None:intergenic 50.0%
TTCCCCACCTTCTTCCTCTA+CGG - chr4.2:33124073-33124092 MS.gene052297:CDS 50.0%
! ATAAGGGCATGGACACGTGT+TGG + chr4.2:33124130-33124149 None:intergenic 50.0%
! CATGATCCTTGTGACTTGCC+AGG - chr4.2:33122296-33122315 MS.gene052297:CDS 50.0%
! CGAAACGCATAATCGGGTTG+AGG - chr4.2:33122600-33122619 MS.gene052297:intron 50.0%
! TTTCTGGAAAGCCACCGGTT+CGG - chr4.2:33122550-33122569 MS.gene052297:CDS 50.0%
!! AATCGGGTTGAGGAAGACGT+TGG - chr4.2:33122610-33122629 MS.gene052297:intron 50.0%
!! GCACTCCAGTTTTGTAGCCA+AGG + chr4.2:33124371-33124390 None:intergenic 50.0%
GGATTACGAGTCCGGTTCCT+AGG + chr4.2:33123429-33123448 None:intergenic 55.0%
GTCCGTAGAGGAAGAAGGTG+GGG + chr4.2:33124078-33124097 None:intergenic 55.0%
GTGTCCGTAGAGGAAGAAGG+TGG + chr4.2:33124080-33124099 None:intergenic 55.0%
! CACGATTTTCCGGTCCGAAC+CGG + chr4.2:33122567-33122586 None:intergenic 55.0%
! GATTTTCCGGTCCGAACCGG+TGG + chr4.2:33122564-33122583 None:intergenic 60.0%
!! GGAAAGCCACCGGTTCGGAC+CGG - chr4.2:33122555-33122574 MS.gene052297:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 33122134 33124415 33122134 ID=MS.gene052297
chr4.2 mRNA 33122134 33124415 33122134 ID=MS.gene052297.t1;Parent=MS.gene052297
chr4.2 exon 33124232 33124415 33124232 ID=MS.gene052297.t1.exon1;Parent=MS.gene052297.t1
chr4.2 CDS 33124232 33124415 33124232 ID=cds.MS.gene052297.t1;Parent=MS.gene052297.t1
chr4.2 exon 33123828 33124096 33123828 ID=MS.gene052297.t1.exon2;Parent=MS.gene052297.t1
chr4.2 CDS 33123828 33124096 33123828 ID=cds.MS.gene052297.t1;Parent=MS.gene052297.t1
chr4.2 exon 33122134 33122583 33122134 ID=MS.gene052297.t1.exon3;Parent=MS.gene052297.t1
chr4.2 CDS 33122134 33122583 33122134 ID=cds.MS.gene052297.t1;Parent=MS.gene052297.t1
Gene Sequence

>MS.gene052297

ATGGCATCAATGGAGGACATCAACATGTGTACTGAACAAATTACACTTCCAGGATTCAGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTTAAGAATATGGTTGTTGGCAAAAAACTTCGTTATGATGTCATTGGTTTTCTAAATATCTATCACCATGATCCTTGTGACTTGCCAGGTATAGTGCTAATCAATCAATTCCTAGTATCATATTATGTGTTACATATTTTCCTAGACATTAATTTAATTTGAAATTATAGTGACTATTTTGATATATATTAATAAAATTATGAATGTTTTGCATGATATATAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTTTTCGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAATCGCACAACTGAGAAAGGTTTCTGGAAAGCCACCGGTTCGGACCGGAAAATCGTGACGTTATCGGATCCGAAACGCATAATCGGGTTGAGGAAGACGTTGGTTTTCTATGAGGGAAGAGCTCCAAGAGGAACCAAGACTGATTGGGTTATGAATGAATACCGTTTACCTGACAATAGCCCCTTGCCTAAGGTATTGTATATATATCTTTCTTCATTTGAATTTGAACTATATAGTCTACATTAGACCCATTCTGTAGTATATTTTTGGTTCCTATCATACGATGACTAATTGACCATAACCATATAAGCTTTAACTATGAATGGATGTGAGTAAAGTTTTAGATTCATGCCCATGTGATTTTGATATAGGGTTATGATAGAAGACACCTTTTGTGAAGGTGTCTTTTATCAAGTTACTCTATGAGCATTTGTTAAAAGACACCAACTACTTTTTATGAAGGTGTCTTTTATCAAAGTTATAACTAAAAAAGTGAAAATCACACCTTGAGGTGTGACTTGATAAAAGACACCACACTACTTTTTATGAAGGTGTCTTGTAACATAACCCTTTGATATATATCACGGGTTTATGTCATTTGATTTACATTGTTCGTTAATTTATCCTTCATTCAATGTAAAAAAAAATGGGAAGGAGAAAATTATTGTTAGTTAAAGTAATATTTTGTAATCATTTTATAATGTACTAGTTATAAACTTAAAATCTTATTACTAAAATCAAAATTCATAAACCAAGTGATTGAACTCAAGTGGTTAATGAGCTCCTCATAGAACGAATTGTTCGAGAAAACCTGAGTTCGATTTCAAGTGAAAACAATTATTAGTCAGACTTTACTTACATCTCTACCAAACTCCCGATTACCAGGATCATTTTCCCCTAGGAACCGGACTCGTAATCCAAAGGGTTAAAACCAAAAAACAAACATGACACTTCATAGGAAAATAATAATAAGTTCCTTCATTCAATTATATATAGTTCATTGATTTATTCATAATTTCTTACAAGATGATATGCTTGCTTTGTTATGGCCAGATTCTCCCAAATAACATGGGAATCTTTTTTACTTTTTTCACAAGAGGGAATTTGTTTATTTTAGTCACAAATTGGACTAGCTAGGAGTTAATTTTTATAGGTAGAAGTGAATAAATAATTAACGTGCATATCTCTCTTACATGGAAGGGAAATTTCCATGAAGATAGCTAGGTAGTGACACTTTCTTTCTGTACAAGTATTGTGGTCCCCTTATGAACCTTTCGTTTCTTTCATGATGAAGTTCCAATTAAGACTTGCAACTAATTAAGATTAAATGTCTTCAAATTTCAAGCAAACATAAACTAATGAAATTGGTTTACTATTTCTACTTACAGCAAAAAAAAAAAAAAATACTAATATATGCCATGGTACGTATGTGACAGGACATAGTATTATGCAAGATATATAGAAAGGCAACTTCGTTGAAAGTGCTTGAACAAAGAGCAGCAGAAGAAGAAGAGATGAAACAAATGGTGGGTTCCCCTACATCTTCCCCACCTTCTTCCTCTACGGACACAATCTCCTTTAACTACACACAACAAGACCAACACGTGTCCATGCCCTTATTGTTTCAACAAGTCATTCCTAAGAAAGAATCTGAACATGAAATAATTAAAACTGAAGACATGGTTTCTTTGTCAAGTCATGAAAAAATTGTGAAAGATAATAAAAAGGCTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTACCTGAACTTCAGTTACCTATAGCTGCAGATTGGACCCAAGATACATTTTGGGCTCAGCTTAATAGTCCTTGGCTACAAAACTGGAGTGCTTACACTAATATCCTGAATTTTTAA
Protein sequence

>MS.gene052297.t1

MASMEDINMCTEQITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYHHDPCDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGTKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMVGSPTSSPPSSSTDTISFNYTQQDQHVSMPLLFQQVIPKKESEHEIIKTEDMVSLSSHEKIVKDNKKACGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQLNSPWLQNWSAYTNILNF