Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52596.t1 | XP_013449374.1 | 98.3 | 361 | 6 | 0 | 1 | 361 | 1 | 361 | 1.20E-176 | 629.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52596.t1 | O04153 | 81.8 | 346 | 62 | 1 | 17 | 361 | 20 | 365 | 7.2e-138 | 491.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52596.t1 | A0A072U156 | 98.3 | 361 | 6 | 0 | 1 | 361 | 1 | 361 | 8.6e-177 | 629.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051207 | MS.gene52596 | 0.818749 | 1.67E-52 | -1.69E-46 |
| MS.gene051544 | MS.gene52596 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene052297 | MS.gene52596 | 0.82213 | 2.79E-53 | -1.69E-46 |
| MS.gene052637 | MS.gene52596 | 0.803591 | 3.24E-49 | -1.69E-46 |
| MS.gene053641 | MS.gene52596 | 0.814766 | 1.30E-51 | -1.69E-46 |
| MS.gene054093 | MS.gene52596 | 0.830154 | 3.45E-55 | -1.69E-46 |
| MS.gene058378 | MS.gene52596 | 0.811943 | 5.44E-51 | -1.69E-46 |
| MS.gene058736 | MS.gene52596 | 0.823738 | 1.18E-53 | -1.69E-46 |
| MS.gene059820 | MS.gene52596 | 0.816314 | 5.89E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44181 | MS.gene52596 | PPI |
| MS.gene005307 | MS.gene52596 | PPI |
| MS.gene40797 | MS.gene52596 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52596.t1 | MTR_7g080370 | 99.050 | 421 | 4 | 0 | 1 | 421 | 1 | 421 | 0.0 | 857 |
| MS.gene52596.t1 | MTR_7g080370 | 99.020 | 408 | 4 | 0 | 1 | 408 | 1 | 408 | 0.0 | 829 |
| MS.gene52596.t1 | MTR_4g068080 | 81.818 | 352 | 63 | 1 | 6 | 356 | 4 | 355 | 0.0 | 612 |
| MS.gene52596.t1 | MTR_1g083960 | 64.286 | 336 | 120 | 0 | 22 | 357 | 21 | 356 | 1.69e-160 | 459 |
| MS.gene52596.t1 | MTR_8g095680 | 32.360 | 411 | 202 | 13 | 1 | 346 | 1 | 400 | 1.07e-54 | 190 |
| MS.gene52596.t1 | MTR_3g098430 | 33.659 | 410 | 199 | 14 | 1 | 348 | 1 | 399 | 1.67e-54 | 189 |
| MS.gene52596.t1 | MTR_3g098430 | 33.659 | 410 | 199 | 14 | 1 | 348 | 1 | 399 | 1.94e-54 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52596.t1 | AT1G08450 | 75.837 | 418 | 92 | 3 | 12 | 421 | 8 | 424 | 0.0 | 625 |
| MS.gene52596.t1 | AT1G08450 | 70.574 | 418 | 89 | 4 | 12 | 421 | 8 | 399 | 0.0 | 563 |
| MS.gene52596.t1 | AT1G09210 | 62.921 | 356 | 131 | 1 | 11 | 365 | 8 | 363 | 3.40e-167 | 476 |
| MS.gene52596.t1 | AT1G56340 | 64.507 | 355 | 123 | 3 | 12 | 365 | 11 | 363 | 3.02e-166 | 473 |
| MS.gene52596.t1 | AT1G56340 | 64.507 | 355 | 123 | 3 | 12 | 365 | 11 | 363 | 8.73e-166 | 472 |
| MS.gene52596.t1 | AT1G08450 | 60.775 | 413 | 104 | 5 | 11 | 421 | 14 | 370 | 2.56e-153 | 439 |
| MS.gene52596.t1 | AT5G61790 | 34.913 | 401 | 187 | 13 | 10 | 347 | 5 | 394 | 3.96e-60 | 204 |
| MS.gene52596.t1 | AT5G07340 | 35.789 | 380 | 175 | 13 | 26 | 347 | 36 | 404 | 1.18e-53 | 187 |
| MS.gene52596.t1 | AT5G07340 | 35.526 | 380 | 176 | 13 | 26 | 347 | 28 | 396 | 1.26e-53 | 187 |
Find 100 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTGGATTTGGTATCTT+TGG | 0.251014 | 7.4:-25884044 | None:intergenic |
| CACTGCAGGTCCTTCTTTAC+CGG | 0.255730 | 7.4:-25882591 | None:intergenic |
| TTTGTTAATCAAAAGAAATT+TGG | 0.279487 | 7.4:+25882106 | MS.gene52596:CDS |
| TCAAGCACACGGCTGGGAAA+TGG | 0.314152 | 7.4:+25881615 | MS.gene52596:CDS |
| TTCCATTTCCCTTTGTAGTT+AGG | 0.319731 | 7.4:-25884210 | None:intergenic |
| CAACTAACCTCTTTAGCCTT+TGG | 0.340138 | 7.4:-25883849 | None:intergenic |
| GTTCATGTACCTCCTCCTCT+TGG | 0.352586 | 7.4:-25885041 | None:intergenic |
| GTTTGGCATCATTAGATGTT+TGG | 0.355336 | 7.4:-25881958 | None:intergenic |
| TTCCATGGTCCTTTGTATGC+TGG | 0.361782 | 7.4:-25884059 | None:intergenic |
| ACCTCAGGTTTGACAGCATT+AGG | 0.362351 | 7.4:-25883691 | None:intergenic |
| GTGTCTGTTCCACATAAATC+TGG | 0.363941 | 7.4:-25882525 | None:intergenic |
| ATGAAGATGAAGATGGAATA+TGG | 0.364616 | 7.4:+25884015 | MS.gene52596:CDS |
| TGCAGAGATCGCAAAGTGTT+TGG | 0.365410 | 7.4:-25881975 | None:intergenic |
| GATAATAGAGAGCGAGATTC+CGG | 0.368628 | 7.4:+25882684 | MS.gene52596:CDS |
| GGTCCTTTGTATGCTGGATT+TGG | 0.374372 | 7.4:-25884053 | None:intergenic |
| TCATCTTCATCCCAACTATC+AGG | 0.377430 | 7.4:-25884002 | None:intergenic |
| GAATAAGCAACACACCTATA+TGG | 0.379411 | 7.4:-25882139 | None:intergenic |
| TCTATGCCGACATATTTGAT+AGG | 0.381388 | 7.4:-25884395 | None:intergenic |
| CCTCAGGTTTGACAGCATTA+GGG | 0.383111 | 7.4:-25883690 | None:intergenic |
| CTATTCGCAGCCCGCAGATT+GGG | 0.390617 | 7.4:+25883645 | MS.gene52596:intron |
| ACCTCTTTAGCCTTTGGATC+AGG | 0.399373 | 7.4:-25883843 | None:intergenic |
| CAAGCACACGGCTGGGAAAT+GGG | 0.400621 | 7.4:+25881616 | MS.gene52596:CDS |
| TTCATGTACCTCCTCCTCTT+GGG | 0.404891 | 7.4:-25885040 | None:intergenic |
| ATCCTAACTACAAAGGGAAA+TGG | 0.410266 | 7.4:+25884208 | MS.gene52596:CDS |
| AATATGTCGGCATAGAAGTT+TGG | 0.412710 | 7.4:+25884402 | MS.gene52596:CDS |
| ATTCTCTACAGTGTAATGTT+TGG | 0.413800 | 7.4:+25882501 | MS.gene52596:intron |
| CCTATTCGCAGCCCGCAGAT+TGG | 0.426278 | 7.4:+25883644 | MS.gene52596:intron |
| TTTGGATCAGGAATTTCTGC+TGG | 0.426476 | 7.4:-25883831 | None:intergenic |
| TCTGAATTAGCCTGATAGTT+GGG | 0.429924 | 7.4:+25883992 | MS.gene52596:intron |
| GGTTCGTTCAAGCACACGGC+TGG | 0.430500 | 7.4:+25881608 | MS.gene52596:CDS |
| GGCTTAAGCACATAAAGATC+GGG | 0.434356 | 7.4:-25884374 | None:intergenic |
| CTGTTCTTGTTGCTGAACTC+TGG | 0.437882 | 7.4:-25882004 | None:intergenic |
| CAACAAGTACCTTTATCATC+TGG | 0.442115 | 7.4:-25881647 | None:intergenic |
| CCAATCTGTATACAGGCTTC+CGG | 0.442635 | 7.4:-25882703 | None:intergenic |
| CTCTGAATTAGCCTGATAGT+TGG | 0.446966 | 7.4:+25883991 | MS.gene52596:intron |
| CCGGAAGCCTGTATACAGAT+TGG | 0.462529 | 7.4:+25882703 | MS.gene52596:CDS |
| CACACGGCTGGGAAATGGGC+TGG | 0.464724 | 7.4:+25881620 | MS.gene52596:CDS |
| GGTTACATGAAGCTCCTCTC+TGG | 0.465293 | 7.4:+25882082 | MS.gene52596:CDS |
| AGATGGATGGCGAAGTCGTT+GGG | 0.466818 | 7.4:+25881550 | MS.gene52596:intron |
| GAATATCCCAATCTGTATAC+AGG | 0.467718 | 7.4:-25882710 | None:intergenic |
| CAACAAACCTTTCGTTTCCA+TGG | 0.469118 | 7.4:-25884074 | None:intergenic |
| CGGAAGCCTGTATACAGATT+GGG | 0.473200 | 7.4:+25882704 | MS.gene52596:CDS |
| GCTGGAGATCCAGATGATAA+AGG | 0.477830 | 7.4:+25881638 | MS.gene52596:CDS |
| TCCTGATCCAAAGGCTAAAG+AGG | 0.483883 | 7.4:+25883842 | MS.gene52596:CDS |
| GTTAATCAAAAGAAATTTGG+TGG | 0.491208 | 7.4:+25882109 | MS.gene52596:CDS |
| AGCCGTGTGCTTGAACGAAC+CGG | 0.494358 | 7.4:-25881606 | None:intergenic |
| TTGGATCAGGAATTTCTGCT+GGG | 0.499650 | 7.4:-25883830 | None:intergenic |
| AAGAAAAGCCCAAGAGGAGG+AGG | 0.504679 | 7.4:+25885032 | MS.gene52596:CDS |
| TCAAGAATCCTAACTACAAA+GGG | 0.508174 | 7.4:+25884202 | MS.gene52596:CDS |
| ACTTGTCAGTTTCACACTGC+AGG | 0.509837 | 7.4:-25882605 | None:intergenic |
| TCAAAATTACCCGGTAAAGA+AGG | 0.510564 | 7.4:+25882581 | MS.gene52596:CDS |
| GCAGCATCGCCGCGATTACA+TGG | 0.517741 | 7.4:+25885574 | MS.gene52596:intron |
| TTCTCTGTCGTCCCAATCTG+CGG | 0.522625 | 7.4:-25883656 | None:intergenic |
| AGAACACTGTATGTAGCATC+TGG | 0.525406 | 7.4:-25882657 | None:intergenic |
| AGATGCTACATACAGTGTTC+TGG | 0.526327 | 7.4:+25882659 | MS.gene52596:CDS |
| AGGCTTAAGCACATAAAGAT+CGG | 0.527530 | 7.4:-25884375 | None:intergenic |
| TTAATCAAAAGAAATTTGGT+GGG | 0.527656 | 7.4:+25882110 | MS.gene52596:CDS |
| GAGCAAGAGAAGACGGTGAA+AGG | 0.541436 | 7.4:+25885157 | MS.gene52596:CDS |
| ATCTGTCTCTATGTCTGTCA+CGG | 0.542268 | 7.4:-25885209 | None:intergenic |
| ATGTTTGGACCAGATTTATG+TGG | 0.542362 | 7.4:+25882516 | MS.gene52596:CDS |
| AAAAGTAGCGAAGGCAAAGC+CGG | 0.546475 | 7.4:+25881587 | MS.gene52596:CDS |
| ATCAAGAATCCTAACTACAA+AGG | 0.551395 | 7.4:+25884201 | MS.gene52596:CDS |
| ATGAAGATGGAATATGGAAG+AGG | 0.552425 | 7.4:+25884021 | MS.gene52596:CDS |
| TCTCTGTCGTCCCAATCTGC+GGG | 0.553759 | 7.4:-25883655 | None:intergenic |
| ACATAGAGACAGATATAGAA+AGG | 0.555956 | 7.4:+25885218 | MS.gene52596:CDS |
| TGTCGGCATAGAAGTTTGGC+AGG | 0.557113 | 7.4:+25884406 | MS.gene52596:CDS |
| AAGGGAAATGGAAAACTCCA+TGG | 0.558271 | 7.4:+25884220 | MS.gene52596:CDS |
| TTGGTGGGGATACGCCATAT+AGG | 0.559039 | 7.4:+25882125 | MS.gene52596:CDS |
| TAATCAAAAGAAATTTGGTG+GGG | 0.560107 | 7.4:+25882111 | MS.gene52596:CDS |
| GCTCAAAGAGCAAGAGAAGA+CGG | 0.562934 | 7.4:+25885150 | MS.gene52596:CDS |
| CAAGAGAAGACGGTGAAAGG+TGG | 0.564949 | 7.4:+25885160 | MS.gene52596:CDS |
| AAGATGGATGGCGAAGTCGT+TGG | 0.569423 | 7.4:+25881549 | MS.gene52596:intron |
| GAAAATAAGAAAAGCCCAAG+AGG | 0.570219 | 7.4:+25885026 | MS.gene52596:CDS |
| AGTTGGGATGAAGATGAAGA+TGG | 0.576627 | 7.4:+25884008 | MS.gene52596:CDS |
| ACTCCATGGATTGATAATCC+AGG | 0.577290 | 7.4:+25884234 | MS.gene52596:CDS |
| AGCCGGTTCGTTCAAGCACA+CGG | 0.577430 | 7.4:+25881604 | MS.gene52596:CDS |
| AGCAGAAATTCCTGATCCAA+AGG | 0.579110 | 7.4:+25883833 | MS.gene52596:CDS |
| GTTCGTTCAAGCACACGGCT+GGG | 0.581442 | 7.4:+25881609 | MS.gene52596:CDS |
| CAAGAGATTGAATGTGGTGG+AGG | 0.581822 | 7.4:+25882061 | MS.gene52596:CDS |
| GAAAGGTGGAGAAAAGAGAG+AGG | 0.587198 | 7.4:+25885174 | MS.gene52596:CDS |
| ACTGCAGGTCCTTCTTTACC+GGG | 0.588635 | 7.4:-25882590 | None:intergenic |
| ATACCTGGATTATCAATCCA+TGG | 0.589530 | 7.4:-25884237 | None:intergenic |
| GTCGTTGGGTAAGATCAGAC+TGG | 0.597270 | 7.4:+25881564 | MS.gene52596:CDS |
| CTTAAGCCTATCAAATATGT+CGG | 0.600649 | 7.4:+25884389 | MS.gene52596:CDS |
| TTTGAACAAGAGATTGAATG+TGG | 0.613935 | 7.4:+25882055 | MS.gene52596:CDS |
| AATAAGAAAAGCCCAAGAGG+AGG | 0.620304 | 7.4:+25885029 | MS.gene52596:CDS |
| CATGTCATAGTCTCTTACCA+AGG | 0.632816 | 7.4:+25882558 | MS.gene52596:CDS |
| CAAAGGACCATGGAAACGAA+AGG | 0.637290 | 7.4:+25884067 | MS.gene52596:CDS |
| ATCCAGCATACAAAGGACCA+TGG | 0.638923 | 7.4:+25884057 | MS.gene52596:CDS |
| TCAGACTGGAAAAGTAGCGA+AGG | 0.639971 | 7.4:+25881578 | MS.gene52596:CDS |
| TTACCAAGGTCAAAATTACC+CGG | 0.651196 | 7.4:+25882572 | MS.gene52596:CDS |
| ATACCAAATCCAGCATACAA+AGG | 0.656179 | 7.4:+25884050 | MS.gene52596:CDS |
| TTTGATTAACAAATCCAGAG+AGG | 0.658404 | 7.4:-25882096 | None:intergenic |
| CCCTAATGCTGTCAAACCTG+AGG | 0.659724 | 7.4:+25883690 | MS.gene52596:CDS |
| GAACAAGAGATTGAATGTGG+TGG | 0.669177 | 7.4:+25882058 | MS.gene52596:CDS |
| CTTGGTAAGAGACTATGACA+TGG | 0.669207 | 7.4:-25882557 | None:intergenic |
| ATGTGCAGGATGAACTCTGA+TGG | 0.669481 | 7.4:+25886004 | MS.gene52596:intron |
| GATAATCATCCATGTAATCG+CGG | 0.671982 | 7.4:-25885583 | None:intergenic |
| GCTTAAGCACATAAAGATCG+GGG | 0.701732 | 7.4:-25884373 | None:intergenic |
| TGAAGTGTTTGCCAACAGAG+AGG | 0.753342 | 7.4:+25884642 | MS.gene52596:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr7.4:25883428-25883447 | None:intergenic | 10.0% |
| !!! | TAAAATTAATGCATATATTT+TGG | + | chr7.4:25884543-25884562 | MS.gene52596:intron | 10.0% |
| !!! | TTTTAGCTTAATTATTTTTT+TGG | - | chr7.4:25883089-25883108 | None:intergenic | 10.0% |
| !! | AAAATGAATAAAAGACAAAT+AGG | + | chr7.4:25881411-25881430 | MS.gene52596:intron | 15.0% |
| !! | ACTCATAAATAAACAATATT+AGG | - | chr7.4:25885383-25885402 | None:intergenic | 15.0% |
| !! | AGAAAAAGTTATTATTACAT+TGG | - | chr7.4:25883364-25883383 | None:intergenic | 15.0% |
| !! | ATGTATAAAAGTTAGATATA+AGG | + | chr7.4:25882961-25882980 | MS.gene52596:intron | 15.0% |
| !! | GTAACATATTATTAATTGAA+GGG | - | chr7.4:25883398-25883417 | None:intergenic | 15.0% |
| !! | TATTACTTCAAGAATTTAAT+TGG | + | chr7.4:25881240-25881259 | MS.gene52596:intron | 15.0% |
| !! | TGAAGTTATAAAAAAATACA+TGG | - | chr7.4:25883046-25883065 | None:intergenic | 15.0% |
| !! | TGTAACATATTATTAATTGA+AGG | - | chr7.4:25883399-25883418 | None:intergenic | 15.0% |
| !! | TTTGATTAATATTAAAGTAG+AGG | - | chr7.4:25882241-25882260 | None:intergenic | 15.0% |
| !! | TTTGTTAATCAAAAGAAATT+TGG | + | chr7.4:25882106-25882125 | MS.gene52596:CDS | 15.0% |
| !!! | AAAAATACATGGATTATTAA+AGG | - | chr7.4:25883035-25883054 | None:intergenic | 15.0% |
| !!! | AACTCATTTATTTTTTTCAT+TGG | + | chr7.4:25883785-25883804 | MS.gene52596:intron | 15.0% |
| !!! | AATGTAAAATGGATTATTAT+AGG | + | chr7.4:25881727-25881746 | MS.gene52596:intron | 15.0% |
| !!! | ACTTTTATACATAAAAGATA+AGG | - | chr7.4:25882953-25882972 | None:intergenic | 15.0% |
| !!! | ATATTTCTAATGACATTATT+AGG | - | chr7.4:25885460-25885479 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr7.4:25883324-25883343 | None:intergenic | 15.0% |
| !!! | CTTGTAATTTTATTGTAAAA+GGG | + | chr7.4:25881817-25881836 | MS.gene52596:intron | 15.0% |
| !!! | TCATAACATTAGTTTAAAAA+GGG | + | chr7.4:25885770-25885789 | MS.gene52596:intron | 15.0% |
| !!! | TCTTGTAATTTTATTGTAAA+AGG | + | chr7.4:25881816-25881835 | MS.gene52596:intron | 15.0% |
| !!! | TGACTTTTTTTTTTTTTTGA+AGG | - | chr7.4:25885753-25885772 | None:intergenic | 15.0% |
| !!! | TTAACTATTAGATGTTATTT+TGG | + | chr7.4:25881750-25881769 | MS.gene52596:intron | 15.0% |
| !! | AAATGCAAATTAGTGAAATA+CGG | + | chr7.4:25881853-25881872 | MS.gene52596:intron | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr7.4:25883462-25883481 | None:intergenic | 20.0% |
| !! | AATAGAAATTTAAACATACG+TGG | - | chr7.4:25881193-25881212 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr7.4:25883461-25883480 | MS.gene52596:intron | 20.0% |
| !! | ACAAAGAACAAGAAATAAAT+TGG | - | chr7.4:25884266-25884285 | None:intergenic | 20.0% |
| !! | AGTGAAAAGTTAGTTAAATT+TGG | + | chr7.4:25881079-25881098 | MS.gene52596:intron | 20.0% |
| !! | ATTAATAGAGGATAGATAAA+AGG | - | chr7.4:25885409-25885428 | None:intergenic | 20.0% |
| !! | ATTATGTGATATTAATGTGT+TGG | + | chr7.4:25881518-25881537 | MS.gene52596:intron | 20.0% |
| !! | CATTAATATCACATAATCAA+TGG | - | chr7.4:25881515-25881534 | None:intergenic | 20.0% |
| !! | CTCTATTAATAAAATATACG+TGG | + | chr7.4:25885419-25885438 | MS.gene52596:intron | 20.0% |
| !! | TCTAAATAGAGAAATATATG+AGG | + | chr7.4:25883928-25883947 | MS.gene52596:intron | 20.0% |
| !! | TGTGATTATGATTATAAGAA+TGG | + | chr7.4:25881343-25881362 | MS.gene52596:intron | 20.0% |
| !! | TTAATCAAAAGAAATTTGGT+GGG | + | chr7.4:25882110-25882129 | MS.gene52596:CDS | 20.0% |
| !!! | ATCTTTTATAAAACACTGTT+TGG | - | chr7.4:25882915-25882934 | None:intergenic | 20.0% |
| !!! | CACGTATATTTTATTAATAG+AGG | - | chr7.4:25885421-25885440 | None:intergenic | 20.0% |
| !!! | CATAACATTAGTTTAAAAAG+GGG | + | chr7.4:25885771-25885790 | MS.gene52596:intron | 20.0% |
| !!! | GTCATAACATTAGTTTAAAA+AGG | + | chr7.4:25885769-25885788 | MS.gene52596:intron | 20.0% |
| !!! | GTTCAAATTTTATAGAATAC+TGG | - | chr7.4:25882042-25882061 | None:intergenic | 20.0% |
| ! | AAAATACCATGTTACAACAA+GGG | - | chr7.4:25882391-25882410 | None:intergenic | 25.0% |
| ! | AAACAAAAAAAAGTGATGTG+TGG | + | chr7.4:25881454-25881473 | MS.gene52596:intron | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr7.4:25883452-25883471 | MS.gene52596:intron | 25.0% |
| ! | AAACTAATGTTATGACTTGA+AGG | - | chr7.4:25885729-25885748 | None:intergenic | 25.0% |
| ! | AAACTCTTAATTATTTGTGC+AGG | + | chr7.4:25885125-25885144 | MS.gene52596:intron | 25.0% |
| ! | AAATCACTTTATGGAAAAAC+AGG | - | chr7.4:25883261-25883280 | None:intergenic | 25.0% |
| ! | AAATGGTAGTATTAGGAATT+TGG | + | chr7.4:25881887-25881906 | MS.gene52596:intron | 25.0% |
| ! | AAGAAAAAGTTGACCATATT+TGG | - | chr7.4:25885695-25885714 | None:intergenic | 25.0% |
| ! | AAGAGATGATAATTGATGAA+AGG | - | chr7.4:25884158-25884177 | None:intergenic | 25.0% |
| ! | AATAAAATCTCACTTCGAAA+AGG | - | chr7.4:25884866-25884885 | None:intergenic | 25.0% |
| ! | ACTTTCATCTCAAATTCATT+TGG | + | chr7.4:25885874-25885893 | MS.gene52596:intron | 25.0% |
| ! | ATCGGAAAATAGATTTATAG+AGG | - | chr7.4:25883899-25883918 | None:intergenic | 25.0% |
| ! | CAAAAACTAAGTGAAGAAAA+TGG | - | chr7.4:25882164-25882183 | None:intergenic | 25.0% |
| ! | CGTGTAAAAATTATGTATGA+GGG | + | chr7.4:25881789-25881808 | MS.gene52596:intron | 25.0% |
| ! | CTATTTAGAAGTCATCATAT+CGG | - | chr7.4:25883917-25883936 | None:intergenic | 25.0% |
| ! | CTTTCATCTCAAATTCATTT+GGG | + | chr7.4:25885875-25885894 | MS.gene52596:intron | 25.0% |
| ! | GAAATAAATTGGAATATACC+TGG | - | chr7.4:25884255-25884274 | None:intergenic | 25.0% |
| ! | GACAAGAGAAATAAAGATAA+TGG | - | chr7.4:25885082-25885101 | None:intergenic | 25.0% |
| ! | GCTATGAATGAAATGTAAAA+TGG | + | chr7.4:25881716-25881735 | MS.gene52596:intron | 25.0% |
| ! | GTATAAGGTAAATCACTTTA+TGG | - | chr7.4:25883270-25883289 | None:intergenic | 25.0% |
| ! | GTTAATCAAAAGAAATTTGG+TGG | + | chr7.4:25882109-25882128 | MS.gene52596:CDS | 25.0% |
| ! | TAAAATACCATGTTACAACA+AGG | - | chr7.4:25882392-25882411 | None:intergenic | 25.0% |
| ! | TAAATATGTGTCTTCTCTTA+GGG | + | chr7.4:25884937-25884956 | MS.gene52596:intron | 25.0% |
| ! | TAACTAAATGACTGTACATA+AGG | - | chr7.4:25885499-25885518 | None:intergenic | 25.0% |
| ! | TAAGAGTTTAGATTCTGTTA+AGG | - | chr7.4:25885114-25885133 | None:intergenic | 25.0% |
| ! | TATTCTTTCTGATGATAAGT+AGG | + | chr7.4:25885632-25885651 | MS.gene52596:intron | 25.0% |
| ! | TTAAATATGTGTCTTCTCTT+AGG | + | chr7.4:25884936-25884955 | MS.gene52596:intron | 25.0% |
| !! | AAATGAGTTTTCCATACAAA+TGG | - | chr7.4:25883774-25883793 | None:intergenic | 25.0% |
| !! | CTGTTGAAAAGTATAAAATG+CGG | - | chr7.4:25882460-25882479 | None:intergenic | 25.0% |
| !! | GAAATAAGGCTAAATTTGTT+TGG | - | chr7.4:25883126-25883145 | None:intergenic | 25.0% |
| !! | GTAATTTTATTGTAAAAGGG+AGG | + | chr7.4:25881820-25881839 | MS.gene52596:intron | 25.0% |
| !! | TAAGCATTTACTAGTTTGAA+TGG | - | chr7.4:25884315-25884334 | None:intergenic | 25.0% |
| !! | TAATCAAAAGAAATTTGGTG+GGG | + | chr7.4:25882111-25882130 | MS.gene52596:CDS | 25.0% |
| !! | TGTTGTTCTTCTCTTTTTAT+TGG | + | chr7.4:25882356-25882375 | MS.gene52596:intron | 25.0% |
| !! | TTTTAATGCCAAAATAAGTC+TGG | + | chr7.4:25883182-25883201 | MS.gene52596:intron | 25.0% |
| !!! | ATAAGGAACTTTTCTAAAAG+TGG | + | chr7.4:25882978-25882997 | MS.gene52596:intron | 25.0% |
| !!! | ATTTTGGAGTTAGTTTGTTT+TGG | + | chr7.4:25881766-25881785 | MS.gene52596:intron | 25.0% |
| !!! | ATTTTTTTCATTGGTATTGC+AGG | + | chr7.4:25883794-25883813 | MS.gene52596:intron | 25.0% |
| !!! | CTTGATGTACATTTTTTTCA+AGG | - | chr7.4:25884891-25884910 | None:intergenic | 25.0% |
| !!! | GCATAAGTGTTTTAGAAATA+AGG | - | chr7.4:25883140-25883159 | None:intergenic | 25.0% |
| !!! | TTCACTTATATTTTTACCGT+TGG | - | chr7.4:25881065-25881084 | None:intergenic | 25.0% |
| !!! | TTTTTTTCATTGGTATTGCA+GGG | + | chr7.4:25883795-25883814 | MS.gene52596:intron | 25.0% |
| AAGTAGGATAACAGATATAG+AGG | + | chr7.4:25885648-25885667 | MS.gene52596:intron | 30.0% | |
| AATGACATTATTAGGAATGC+TGG | - | chr7.4:25885452-25885471 | None:intergenic | 30.0% | |
| ACATAGAGACAGATATAGAA+AGG | + | chr7.4:25885218-25885237 | MS.gene52596:CDS | 30.0% | |
| ACGAAAAATCAAAGATCTCA+AGG | + | chr7.4:25882740-25882759 | MS.gene52596:CDS | 30.0% | |
| AGAGAAGACACATATTTAAG+AGG | - | chr7.4:25884935-25884954 | None:intergenic | 30.0% | |
| ATACAAGTCATCACTGAATT+TGG | - | chr7.4:25884450-25884469 | None:intergenic | 30.0% | |
| ATATTGATCGTATGCATGTA+TGG | - | chr7.4:25885250-25885269 | None:intergenic | 30.0% | |
| ATCAAGAATCCTAACTACAA+AGG | + | chr7.4:25884201-25884220 | MS.gene52596:CDS | 30.0% | |
| ATGAAGATGAAGATGGAATA+TGG | + | chr7.4:25884015-25884034 | MS.gene52596:CDS | 30.0% | |
| ATTAGAACTTTGAATACCTC+AGG | - | chr7.4:25883709-25883728 | None:intergenic | 30.0% | |
| ATTCTCTACAGTGTAATGTT+TGG | + | chr7.4:25882501-25882520 | MS.gene52596:intron | 30.0% | |
| ATTTGTCTTGTCCTCAAAAA+GGG | - | chr7.4:25885305-25885324 | None:intergenic | 30.0% | |
| CTTAAGCCTATCAAATATGT+CGG | + | chr7.4:25884389-25884408 | MS.gene52596:CDS | 30.0% | |
| GAGTACAAAATGGTAGTATT+AGG | + | chr7.4:25881880-25881899 | MS.gene52596:intron | 30.0% | |
| GCGTGTAAAAATTATGTATG+AGG | + | chr7.4:25881788-25881807 | MS.gene52596:intron | 30.0% | |
| GTGTTTGTAAAAATGATGCA+AGG | - | chr7.4:25882420-25882439 | None:intergenic | 30.0% | |
| TAATCTTTCCCCTATGATAA+AGG | + | chr7.4:25883725-25883744 | MS.gene52596:intron | 30.0% | |
| TACATGAACATACACTACTT+CGG | + | chr7.4:25885055-25885074 | MS.gene52596:intron | 30.0% | |
| TAGTTATCACTGTACTATGT+TGG | + | chr7.4:25885830-25885849 | MS.gene52596:intron | 30.0% | |
| TATTTGTCTTGTCCTCAAAA+AGG | - | chr7.4:25885306-25885325 | None:intergenic | 30.0% | |
| TCAAGAATCCTAACTACAAA+GGG | + | chr7.4:25884202-25884221 | MS.gene52596:CDS | 30.0% | |
| TGCACACATATTAAGGAATA+TGG | - | chr7.4:25883518-25883537 | None:intergenic | 30.0% | |
| TTAAACTGACCTTTACTTTG+TGG | + | chr7.4:25884966-25884985 | MS.gene52596:intron | 30.0% | |
| TTCCTTAATATGTGTGCAAT+TGG | + | chr7.4:25883520-25883539 | MS.gene52596:intron | 30.0% | |
| TTTGAACAAGAGATTGAATG+TGG | + | chr7.4:25882055-25882074 | MS.gene52596:CDS | 30.0% | |
| TTTGATTAACAAATCCAGAG+AGG | - | chr7.4:25882099-25882118 | None:intergenic | 30.0% | |
| ! | AATGTTTTCTTTTGATGTGC+AGG | + | chr7.4:25885990-25886009 | MS.gene52596:intron | 30.0% |
| ! | CTCAATATCTAACTTGTAAG+TGG | + | chr7.4:25884698-25884717 | MS.gene52596:intron | 30.0% |
| ! | TGCTGAAATTTTCATTCCAA+CGG | + | chr7.4:25881046-25881065 | MS.gene52596:intron | 30.0% |
| ! | TTGATTTTCTGTCAACATAG+AGG | - | chr7.4:25884186-25884205 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr7.4:25883298-25883317 | None:intergenic | 30.0% |
| !! | CTTCTTTTAAGGAGAAGAAA+AGG | - | chr7.4:25882887-25882906 | None:intergenic | 30.0% |
| !! | GTTTGGCTTAACTTCTTTTA+AGG | - | chr7.4:25882898-25882917 | None:intergenic | 30.0% |
| !! | TGTGTTGGATTTTGAAAAGA+TGG | + | chr7.4:25881533-25881552 | MS.gene52596:intron | 30.0% |
| !! | TTGAGATCTTTGATTTTTCG+TGG | - | chr7.4:25882741-25882760 | None:intergenic | 30.0% |
| !! | TTGGATTTTGAAAAGATGGA+TGG | + | chr7.4:25881537-25881556 | MS.gene52596:intron | 30.0% |
| !!! | ACAACTTGTTTTGCATATTC+AGG | - | chr7.4:25884619-25884638 | None:intergenic | 30.0% |
| !!! | CTAGTTTTAGTCCATTTGTA+TGG | + | chr7.4:25883760-25883779 | MS.gene52596:intron | 30.0% |
| !!! | TTTTTGAGTGATCTTGTTGT+AGG | + | chr7.4:25881932-25881951 | MS.gene52596:intron | 30.0% |
| AAAAGAGAAGAACAACAGCA+TGG | - | chr7.4:25882353-25882372 | None:intergenic | 35.0% | |
| AATAGCACAGATACTCAGAT+TGG | + | chr7.4:25885322-25885341 | MS.gene52596:intron | 35.0% | |
| AATATGTCGGCATAGAAGTT+TGG | + | chr7.4:25884402-25884421 | MS.gene52596:CDS | 35.0% | |
| ACAAATAGGACTAAGCAAGT+TGG | + | chr7.4:25881425-25881444 | MS.gene52596:intron | 35.0% | |
| ACATTTAGGTCTCATTGTTG+CGG | + | chr7.4:25883577-25883596 | MS.gene52596:intron | 35.0% | |
| AGCCAATTGCACACATATTA+AGG | - | chr7.4:25883525-25883544 | None:intergenic | 35.0% | |
| AGGCTTAAGCACATAAAGAT+CGG | - | chr7.4:25884378-25884397 | None:intergenic | 35.0% | |
| ATACCAAATCCAGCATACAA+AGG | + | chr7.4:25884050-25884069 | MS.gene52596:CDS | 35.0% | |
| ATACCTGGATTATCAATCCA+TGG | - | chr7.4:25884240-25884259 | None:intergenic | 35.0% | |
| ATCCTAACTACAAAGGGAAA+TGG | + | chr7.4:25884208-25884227 | MS.gene52596:CDS | 35.0% | |
| ATGAAGATGGAATATGGAAG+AGG | + | chr7.4:25884021-25884040 | MS.gene52596:CDS | 35.0% | |
| ATGTTTGGACCAGATTTATG+TGG | + | chr7.4:25882516-25882535 | MS.gene52596:CDS | 35.0% | |
| CAAAAAAAAGTGATGTGTGG+TGG | + | chr7.4:25881457-25881476 | MS.gene52596:intron | 35.0% | |
| CAAAGATCTCAAGGCAAAAA+AGG | + | chr7.4:25882749-25882768 | MS.gene52596:CDS | 35.0% | |
| CAAATTAGTGAAATACGGTG+GGG | + | chr7.4:25881858-25881877 | MS.gene52596:intron | 35.0% | |
| CAACAAGTACCTTTATCATC+TGG | - | chr7.4:25881650-25881669 | None:intergenic | 35.0% | |
| CAGCGAAAAATCAATACACA+CGG | - | chr7.4:25884771-25884790 | None:intergenic | 35.0% | |
| CCTCTTGTTCCTTTATCATA+GGG | - | chr7.4:25883737-25883756 | None:intergenic | 35.0% | |
| CTCTTAATTATTTGTGCAGG+AGG | + | chr7.4:25885128-25885147 | MS.gene52596:intron | 35.0% | |
| CTCTTGTTCCTTTATCATAG+GGG | - | chr7.4:25883736-25883755 | None:intergenic | 35.0% | |
| GAAAATAAGAAAAGCCCAAG+AGG | + | chr7.4:25885026-25885045 | MS.gene52596:CDS | 35.0% | |
| GAATAAGCAACACACCTATA+TGG | - | chr7.4:25882142-25882161 | None:intergenic | 35.0% | |
| GAATATCCCAATCTGTATAC+AGG | - | chr7.4:25882713-25882732 | None:intergenic | 35.0% | |
| GATAATCATCCATGTAATCG+CGG | - | chr7.4:25885586-25885605 | None:intergenic | 35.0% | |
| GCAAATTAGTGAAATACGGT+GGG | + | chr7.4:25881857-25881876 | MS.gene52596:intron | 35.0% | |
| GTTTGGCATCATTAGATGTT+TGG | - | chr7.4:25881961-25881980 | None:intergenic | 35.0% | |
| TAAGACTCTTAAGCTACGTT+TGG | - | chr7.4:25883208-25883227 | None:intergenic | 35.0% | |
| TAGATTCTGTTAAGGCAACA+AGG | - | chr7.4:25885106-25885125 | None:intergenic | 35.0% | |
| TCAAAATTACCCGGTAAAGA+AGG | + | chr7.4:25882581-25882600 | MS.gene52596:CDS | 35.0% | |
| TCCTCTTGTTCCTTTATCAT+AGG | - | chr7.4:25883738-25883757 | None:intergenic | 35.0% | |
| TCTATGCCGACATATTTGAT+AGG | - | chr7.4:25884398-25884417 | None:intergenic | 35.0% | |
| TGCAAATTAGTGAAATACGG+TGG | + | chr7.4:25881856-25881875 | MS.gene52596:intron | 35.0% | |
| TGGTGGTCAATTTCCAAATA+TGG | + | chr7.4:25885679-25885698 | MS.gene52596:intron | 35.0% | |
| TTACCAAGGTCAAAATTACC+CGG | + | chr7.4:25882572-25882591 | MS.gene52596:CDS | 35.0% | |
| TTCCATTTCCCTTTGTAGTT+AGG | - | chr7.4:25884213-25884232 | None:intergenic | 35.0% | |
| ! | AAAGCACCATGTTATGCTAA+AGG | - | chr7.4:25882820-25882839 | None:intergenic | 35.0% |
| ! | CTAACTTGTAAGTGGCAATT+GGG | + | chr7.4:25884706-25884725 | MS.gene52596:intron | 35.0% |
| ! | GATTGAAAAAGAGGCTTTTG+AGG | + | chr7.4:25884996-25885015 | MS.gene52596:intron | 35.0% |
| ! | TATGCTGGATTTGGTATCTT+TGG | - | chr7.4:25884047-25884066 | None:intergenic | 35.0% |
| ! | TCTAACTTGTAAGTGGCAAT+TGG | + | chr7.4:25884705-25884724 | MS.gene52596:intron | 35.0% |
| ! | TCTGAATTAGCCTGATAGTT+GGG | + | chr7.4:25883992-25884011 | MS.gene52596:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr7.4:25883546-25883565 | MS.gene52596:intron | 35.0% |
| !! | AGATCTTTGATTTTTCGTGG+AGG | - | chr7.4:25882738-25882757 | None:intergenic | 35.0% |
| !! | AGGTTTGTTGATAAAGTTGC+AGG | + | chr7.4:25884087-25884106 | MS.gene52596:intron | 35.0% |
| !! | CTTTTCTAAAAGTGGTTGAG+AGG | + | chr7.4:25882986-25883005 | MS.gene52596:intron | 35.0% |
| !! | GATCTTTGATTTTTCGTGGA+GGG | - | chr7.4:25882737-25882756 | None:intergenic | 35.0% |
| !!! | ATATAGAGGTGTCATTTTGG+TGG | + | chr7.4:25885662-25885681 | MS.gene52596:intron | 35.0% |
| !!! | CAGATATAGAGGTGTCATTT+TGG | + | chr7.4:25885659-25885678 | MS.gene52596:intron | 35.0% |
| !!! | CTCTAAAGCTACTTTTGATC+TGG | + | chr7.4:25882851-25882870 | MS.gene52596:intron | 35.0% |
| !!! | TAATGCATATATTTTGGCCC+AGG | + | chr7.4:25884549-25884568 | MS.gene52596:intron | 35.0% |
| !!! | TATATTTTGGCCCAGGTTAA+AGG | + | chr7.4:25884556-25884575 | MS.gene52596:intron | 35.0% |
| AAACGGAGGGAGTAACATTT+AGG | + | chr7.4:25883563-25883582 | MS.gene52596:intron | 40.0% | |
| AAGGGAAATGGAAAACTCCA+TGG | + | chr7.4:25884220-25884239 | MS.gene52596:CDS | 40.0% | |
| AATAAGAAAAGCCCAAGAGG+AGG | + | chr7.4:25885029-25885048 | MS.gene52596:CDS | 40.0% | |
| ACATAAGGCTCAACTCAAAG+TGG | - | chr7.4:25885484-25885503 | None:intergenic | 40.0% | |
| AGAACACTGTATGTAGCATC+TGG | - | chr7.4:25882660-25882679 | None:intergenic | 40.0% | |
| AGATGCTACATACAGTGTTC+TGG | + | chr7.4:25882659-25882678 | MS.gene52596:CDS | 40.0% | |
| AGCAGAAATTCCTGATCCAA+AGG | + | chr7.4:25883833-25883852 | MS.gene52596:CDS | 40.0% | |
| AGTTGGGATGAAGATGAAGA+TGG | + | chr7.4:25884008-25884027 | MS.gene52596:CDS | 40.0% | |
| ATCCATTCAGCCTAATAGCT+CGG | - | chr7.4:25884511-25884530 | None:intergenic | 40.0% | |
| ATCTGTCTCTATGTCTGTCA+CGG | - | chr7.4:25885212-25885231 | None:intergenic | 40.0% | |
| CAAAAAACTCACCTCTCTGT+TGG | - | chr7.4:25884656-25884675 | None:intergenic | 40.0% | |
| CAACAAACCTTTCGTTTCCA+TGG | - | chr7.4:25884077-25884096 | None:intergenic | 40.0% | |
| CACTGTCCTTTAGCATAACA+TGG | + | chr7.4:25882811-25882830 | MS.gene52596:intron | 40.0% | |
| CATGTCATAGTCTCTTACCA+AGG | + | chr7.4:25882558-25882577 | MS.gene52596:CDS | 40.0% | |
| CCCTATGATAAAGGAACAAG+AGG | + | chr7.4:25883734-25883753 | MS.gene52596:intron | 40.0% | |
| CTTGGTAAGAGACTATGACA+TGG | - | chr7.4:25882560-25882579 | None:intergenic | 40.0% | |
| GAACAAGAGATTGAATGTGG+TGG | + | chr7.4:25882058-25882077 | MS.gene52596:CDS | 40.0% | |
| GAAGAACAACAGCATGGATA+TGG | - | chr7.4:25882347-25882366 | None:intergenic | 40.0% | |
| GATAATAGAGAGCGAGATTC+CGG | + | chr7.4:25882684-25882703 | MS.gene52596:CDS | 40.0% | |
| GCTTAAGCACATAAAGATCG+GGG | - | chr7.4:25884376-25884395 | None:intergenic | 40.0% | |
| GGCATCTCAGATTGAAAAAG+AGG | + | chr7.4:25884987-25885006 | MS.gene52596:intron | 40.0% | |
| GGCTTAAGCACATAAAGATC+GGG | - | chr7.4:25884377-25884396 | None:intergenic | 40.0% | |
| GTGTCTGTTCCACATAAATC+TGG | - | chr7.4:25882528-25882547 | None:intergenic | 40.0% | |
| TCATCTTCATCCCAACTATC+AGG | - | chr7.4:25884005-25884024 | None:intergenic | 40.0% | |
| TCTCACTTCGAAAAGGCTTA+AGG | - | chr7.4:25884859-25884878 | None:intergenic | 40.0% | |
| TTGGATCAGGAATTTCTGCT+GGG | - | chr7.4:25883833-25883852 | None:intergenic | 40.0% | |
| TTTGGATCAGGAATTTCTGC+TGG | - | chr7.4:25883834-25883853 | None:intergenic | 40.0% | |
| ! | ACGTTTGGCCAGACTTATTT+TGG | - | chr7.4:25883193-25883212 | None:intergenic | 40.0% |
| ! | ACTCCATGGATTGATAATCC+AGG | + | chr7.4:25884234-25884253 | MS.gene52596:CDS | 40.0% |
| ! | ACTGTACTATGTTGGTAGAC+TGG | + | chr7.4:25885838-25885857 | MS.gene52596:intron | 40.0% |
| ! | AGGTTAGTTGAGTAGAAGAG+TGG | + | chr7.4:25883862-25883881 | MS.gene52596:intron | 40.0% |
| ! | CAACTAACCTCTTTAGCCTT+TGG | - | chr7.4:25883852-25883871 | None:intergenic | 40.0% |
| ! | CTCTGAATTAGCCTGATAGT+TGG | + | chr7.4:25883991-25884010 | MS.gene52596:intron | 40.0% |
| ! | CTGTACTATGTTGGTAGACT+GGG | + | chr7.4:25885839-25885858 | MS.gene52596:intron | 40.0% |
| ! | GAACATTCACTCCCTTTTTG+AGG | + | chr7.4:25885291-25885310 | MS.gene52596:intron | 40.0% |
| ! | TCTGAGATGCCACAAAGTAA+AGG | - | chr7.4:25884978-25884997 | None:intergenic | 40.0% |
| ! | TTTGAAACGGAGGGAGTATA+AGG | - | chr7.4:25883285-25883304 | None:intergenic | 40.0% |
| !! | AAAGTAGAGGTCATTTTGCG+AGG | - | chr7.4:25882228-25882247 | None:intergenic | 40.0% |
| !! | CATCTTCAAACTCTGAGACA+CGG | - | chr7.4:25884352-25884371 | None:intergenic | 40.0% |
| !! | TTACCGGGTAATTTTGACCT+TGG | - | chr7.4:25882578-25882597 | None:intergenic | 40.0% |
| !!! | ATCTTCGAAGAGCGTTTTGA+AGG | + | chr7.4:25880996-25881015 | MS.gene52596:CDS | 40.0% |
| !!! | CGTGTGTATTGATTTTTCGC+TGG | + | chr7.4:25884769-25884788 | MS.gene52596:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7.4:25883550-25883569 | MS.gene52596:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7.4:25883569-25883550 | None:intergenic | 40.0% |
| AAAAGTAGCGAAGGCAAAGC+CGG | + | chr7.4:25881587-25881606 | MS.gene52596:CDS | 45.0% | |
| ACCTCAGGTTTGACAGCATT+AGG | - | chr7.4:25883694-25883713 | None:intergenic | 45.0% | |
| ACTTGTCAGTTTCACACTGC+AGG | - | chr7.4:25882608-25882627 | None:intergenic | 45.0% | |
| ATACTGAACCGCCTTTAACC+TGG | - | chr7.4:25884570-25884589 | None:intergenic | 45.0% | |
| ATCCAGCATACAAAGGACCA+TGG | + | chr7.4:25884057-25884076 | MS.gene52596:CDS | 45.0% | |
| CAAAGGACCATGGAAACGAA+AGG | + | chr7.4:25884067-25884086 | MS.gene52596:CDS | 45.0% | |
| CAAGAGATTGAATGTGGTGG+AGG | + | chr7.4:25882061-25882080 | MS.gene52596:CDS | 45.0% | |
| CCAATCTGTATACAGGCTTC+CGG | - | chr7.4:25882706-25882725 | None:intergenic | 45.0% | |
| CCTCAGGTTTGACAGCATTA+GGG | - | chr7.4:25883693-25883712 | None:intergenic | 45.0% | |
| CGGAAGCCTGTATACAGATT+GGG | + | chr7.4:25882704-25882723 | MS.gene52596:CDS | 45.0% | |
| CTGTTCTTGTTGCTGAACTC+TGG | - | chr7.4:25882007-25882026 | None:intergenic | 45.0% | |
| GAAAGGTGGAGAAAAGAGAG+AGG | + | chr7.4:25885174-25885193 | MS.gene52596:CDS | 45.0% | |
| GCTCAAAGAGCAAGAGAAGA+CGG | + | chr7.4:25885150-25885169 | MS.gene52596:CDS | 45.0% | |
| GCTGGAGATCCAGATGATAA+AGG | + | chr7.4:25881638-25881657 | MS.gene52596:CDS | 45.0% | |
| GGTCCTTTGTATGCTGGATT+TGG | - | chr7.4:25884056-25884075 | None:intergenic | 45.0% | |
| TACTGAACCGCCTTTAACCT+GGG | - | chr7.4:25884569-25884588 | None:intergenic | 45.0% | |
| TCAGACTGGAAAAGTAGCGA+AGG | + | chr7.4:25881578-25881597 | MS.gene52596:CDS | 45.0% | |
| TCCTGATCCAAAGGCTAAAG+AGG | + | chr7.4:25883842-25883861 | MS.gene52596:CDS | 45.0% | |
| TTCATGTACCTCCTCCTCTT+GGG | - | chr7.4:25885043-25885062 | None:intergenic | 45.0% | |
| TTCCATGGTCCTTTGTATGC+TGG | - | chr7.4:25884062-25884081 | None:intergenic | 45.0% | |
| ! | ACCTCTTTAGCCTTTGGATC+AGG | - | chr7.4:25883846-25883865 | None:intergenic | 45.0% |
| ! | ATACGGTGGGGAGTACAAAA+TGG | + | chr7.4:25881870-25881889 | MS.gene52596:intron | 45.0% |
| ! | GCTTGACCCTTGTTGTAACA+TGG | + | chr7.4:25882382-25882401 | MS.gene52596:intron | 45.0% |
| ! | TGAAGTGTTTGCCAACAGAG+AGG | + | chr7.4:25884642-25884661 | MS.gene52596:CDS | 45.0% |
| ! | TGCAGAGATCGCAAAGTGTT+TGG | - | chr7.4:25881978-25881997 | None:intergenic | 45.0% |
| !! | ATTTTGGCCCAGGTTAAAGG+CGG | + | chr7.4:25884559-25884578 | MS.gene52596:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7.4:25883549-25883568 | MS.gene52596:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7.4:25883568-25883549 | None:intergenic | 45.0% |
| AAGAAAAGCCCAAGAGGAGG+AGG | + | chr7.4:25885032-25885051 | MS.gene52596:CDS | 50.0% | |
| AAGATGGATGGCGAAGTCGT+TGG | + | chr7.4:25881549-25881568 | MS.gene52596:intron | 50.0% | |
| ACTGCAGGTCCTTCTTTACC+GGG | - | chr7.4:25882593-25882612 | None:intergenic | 50.0% | |
| AGATGGATGGCGAAGTCGTT+GGG | + | chr7.4:25881550-25881569 | MS.gene52596:intron | 50.0% | |
| CAAGAGAAGACGGTGAAAGG+TGG | + | chr7.4:25885160-25885179 | MS.gene52596:CDS | 50.0% | |
| CACTGCAGGTCCTTCTTTAC+CGG | - | chr7.4:25882594-25882613 | None:intergenic | 50.0% | |
| CCCTAATGCTGTCAAACCTG+AGG | + | chr7.4:25883690-25883709 | MS.gene52596:CDS | 50.0% | |
| CCGGAAGCCTGTATACAGAT+TGG | + | chr7.4:25882703-25882722 | MS.gene52596:CDS | 50.0% | |
| GAGCAAGAGAAGACGGTGAA+AGG | + | chr7.4:25885157-25885176 | MS.gene52596:CDS | 50.0% | |
| GGTTACATGAAGCTCCTCTC+TGG | + | chr7.4:25882082-25882101 | MS.gene52596:CDS | 50.0% | |
| GTCGTTGGGTAAGATCAGAC+TGG | + | chr7.4:25881564-25881583 | MS.gene52596:CDS | 50.0% | |
| GTTCATGTACCTCCTCCTCT+TGG | - | chr7.4:25885044-25885063 | None:intergenic | 50.0% | |
| TGCCGAGCTATTAGGCTGAA+TGG | + | chr7.4:25884506-25884525 | MS.gene52596:intron | 50.0% | |
| TGTCGGCATAGAAGTTTGGC+AGG | + | chr7.4:25884406-25884425 | MS.gene52596:CDS | 50.0% | |
| TTCTCTGTCGTCCCAATCTG+CGG | - | chr7.4:25883659-25883678 | None:intergenic | 50.0% | |
| TTGGTGGGGATACGCCATAT+AGG | + | chr7.4:25882125-25882144 | MS.gene52596:CDS | 50.0% | |
| !! | GGAGGGAAAGCACTTGTAAG+TGG | - | chr7.4:25885549-25885568 | None:intergenic | 50.0% |
| AGCCGTGTGCTTGAACGAAC+CGG | - | chr7.4:25881609-25881628 | None:intergenic | 55.0% | |
| CAAGCACACGGCTGGGAAAT+GGG | + | chr7.4:25881616-25881635 | MS.gene52596:CDS | 55.0% | |
| CTACGACGTGCCGAGCTATT+AGG | + | chr7.4:25884498-25884517 | MS.gene52596:intron | 55.0% | |
| CTATTCGCAGCCCGCAGATT+GGG | + | chr7.4:25883645-25883664 | MS.gene52596:intron | 55.0% | |
| GTTCGTTCAAGCACACGGCT+GGG | + | chr7.4:25881609-25881628 | MS.gene52596:CDS | 55.0% | |
| TCAAGCACACGGCTGGGAAA+TGG | + | chr7.4:25881615-25881634 | MS.gene52596:CDS | 55.0% | |
| TCTCTGTCGTCCCAATCTGC+GGG | - | chr7.4:25883658-25883677 | None:intergenic | 55.0% | |
| ! | CAATCTGCGGGCTGCGAATA+GGG | - | chr7.4:25883646-25883665 | None:intergenic | 55.0% |
| !! | AGCCGGTTCGTTCAAGCACA+CGG | + | chr7.4:25881604-25881623 | MS.gene52596:CDS | 55.0% |
| ACCACTCGGGCTACGTCTAG+AGG | + | chr7.4:25885910-25885929 | MS.gene52596:intron | 60.0% | |
| ATCGCGGCGATGCTGCACAT+AGG | - | chr7.4:25885570-25885589 | None:intergenic | 60.0% | |
| CCTATTCGCAGCCCGCAGAT+TGG | + | chr7.4:25883644-25883663 | MS.gene52596:intron | 60.0% | |
| CGGCGATGCTGCACATAGGA+GGG | - | chr7.4:25885566-25885585 | None:intergenic | 60.0% | |
| GCAGCATCGCCGCGATTACA+TGG | + | chr7.4:25885574-25885593 | MS.gene52596:intron | 60.0% | |
| GGTGTCCGAGCTCAACCACT+CGG | + | chr7.4:25885896-25885915 | MS.gene52596:intron | 60.0% | |
| GGTTCGTTCAAGCACACGGC+TGG | + | chr7.4:25881608-25881627 | MS.gene52596:CDS | 60.0% | |
| GTAGCCCGAGTGGTTGAGCT+CGG | - | chr7.4:25885904-25885923 | None:intergenic | 60.0% | |
| GTGTCCGAGCTCAACCACTC+GGG | + | chr7.4:25885897-25885916 | MS.gene52596:intron | 60.0% | |
| TCCTCTAGACGTAGCCCGAG+TGG | - | chr7.4:25885914-25885933 | None:intergenic | 60.0% | |
| ! | CCAATCTGCGGGCTGCGAAT+AGG | - | chr7.4:25883647-25883666 | None:intergenic | 60.0% |
| CACACGGCTGGGAAATGGGC+TGG | + | chr7.4:25881620-25881639 | MS.gene52596:CDS | 65.0% | |
| GCGGCGATGCTGCACATAGG+AGG | - | chr7.4:25885567-25885586 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 25880915 | 25886023 | 25880915 | ID=MS.gene52596 |
| chr7.4 | mRNA | 25880915 | 25886023 | 25880915 | ID=MS.gene52596.t1;Parent=MS.gene52596 |
| chr7.4 | exon | 25880915 | 25881017 | 25880915 | ID=MS.gene52596.t1.exon1;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25880915 | 25881017 | 25880915 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25881552 | 25881659 | 25881552 | ID=MS.gene52596.t1.exon2;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25881552 | 25881659 | 25881552 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25881954 | 25882146 | 25881954 | ID=MS.gene52596.t1.exon3;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25881954 | 25882146 | 25881954 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25882512 | 25882770 | 25882512 | ID=MS.gene52596.t1.exon4;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25882512 | 25882770 | 25882512 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25883655 | 25883711 | 25883655 | ID=MS.gene52596.t1.exon5;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25883655 | 25883711 | 25883655 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25883816 | 25883863 | 25883816 | ID=MS.gene52596.t1.exon6;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25883816 | 25883863 | 25883816 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25884002 | 25884088 | 25884002 | ID=MS.gene52596.t1.exon7;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25884002 | 25884088 | 25884002 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25884198 | 25884255 | 25884198 | ID=MS.gene52596.t1.exon8;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25884198 | 25884255 | 25884198 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25884360 | 25884427 | 25884360 | ID=MS.gene52596.t1.exon9;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25884360 | 25884427 | 25884360 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25884571 | 25884663 | 25884571 | ID=MS.gene52596.t1.exon10;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25884571 | 25884663 | 25884571 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25884997 | 25885053 | 25884997 | ID=MS.gene52596.t1.exon11;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25884997 | 25885053 | 25884997 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25885147 | 25885239 | 25885147 | ID=MS.gene52596.t1.exon12;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25885147 | 25885239 | 25885147 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25885578 | 25885607 | 25885578 | ID=MS.gene52596.t1.exon13;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25885578 | 25885607 | 25885578 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| chr7.4 | exon | 25886012 | 25886023 | 25886012 | ID=MS.gene52596.t1.exon14;Parent=MS.gene52596.t1 |
| chr7.4 | CDS | 25886012 | 25886023 | 25886012 | ID=cds.MS.gene52596.t1;Parent=MS.gene52596.t1 |
| Gene Sequence |
| Protein sequence |
