Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059820.t1 | XP_013464701.1 | 89.2 | 918 | 96 | 2 | 1 | 918 | 1 | 915 | 0.00E+00 | 1601.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059820.t1 | A0A072VAU6 | 89.2 | 918 | 96 | 2 | 1 | 918 | 1 | 915 | 0.0e+00 | 1601.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050640 | MS.gene059820 | 0.820544 | 6.48E-53 | -1.69E-46 |
| MS.gene051544 | MS.gene059820 | 0.821985 | 3.02E-53 | -1.69E-46 |
| MS.gene052297 | MS.gene059820 | 0.828422 | 9.07E-55 | -1.69E-46 |
| MS.gene052637 | MS.gene059820 | 0.826809 | 2.21E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene059820 | 0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene055217 | MS.gene059820 | 0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene059820 | 0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene060038 | 0.834905 | 2.29E-56 | -1.69E-46 |
| MS.gene059820 | MS.gene07137 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene073984 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene073986 | 0.812038 | 5.18E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene07615 | 0.814086 | 1.84E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene07617 | 0.814343 | 1.62E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene07621 | 0.810633 | 1.05E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene07986 | 0.81391 | 2.02E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene08004 | 0.825322 | 4.99E-54 | -1.69E-46 |
| MS.gene059820 | MS.gene08014 | 0.800464 | 1.42E-48 | -1.69E-46 |
| MS.gene059820 | MS.gene21665 | 0.836148 | 1.11E-56 | -1.69E-46 |
| MS.gene059820 | MS.gene22040 | 0.818415 | 1.98E-52 | -1.69E-46 |
| MS.gene059820 | MS.gene22803 | 0.839667 | 1.38E-57 | -1.69E-46 |
| MS.gene059820 | MS.gene28933 | 0.837156 | 6.14E-57 | -1.69E-46 |
| MS.gene059820 | MS.gene37875 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene44667 | 0.804847 | 1.77E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene44672 | 0.825489 | 4.56E-54 | -1.69E-46 |
| MS.gene059820 | MS.gene48558 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene059820 | MS.gene48561 | 0.830317 | 3.14E-55 | -1.69E-46 |
| MS.gene059820 | MS.gene48777 | 0.804371 | 2.23E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene51389 | 0.809893 | 1.51E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene52596 | 0.816314 | 5.89E-52 | -1.69E-46 |
| MS.gene059820 | MS.gene53832 | 0.804218 | 2.40E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene53834 | 0.828498 | 8.70E-55 | -1.69E-46 |
| MS.gene059820 | MS.gene53843 | 0.813569 | 2.40E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene53848 | 0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene54129 | 0.809229 | 2.10E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene70072 | 0.832504 | 9.10E-56 | -1.69E-46 |
| MS.gene059820 | MS.gene70077 | 0.844404 | 7.72E-59 | -1.69E-46 |
| MS.gene059820 | MS.gene76185 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene80082 | 0.844509 | 7.24E-59 | -1.69E-46 |
| MS.gene059820 | MS.gene80811 | 0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene81554 | 0.839431 | 1.59E-57 | -1.69E-46 |
| MS.gene059820 | MS.gene81581 | 0.801935 | 7.12E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene85785 | 0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene85796 | 0.807143 | 5.84E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene86331 | 0.824107 | 9.66E-54 | -1.69E-46 |
| MS.gene059820 | MS.gene89337 | 0.815233 | 1.03E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene90451 | 0.821566 | 3.77E-53 | -1.69E-46 |
| MS.gene059820 | MS.gene90456 | 0.804056 | 2.59E-49 | -1.69E-46 |
| MS.gene059820 | MS.gene91428 | 0.861022 | 1.37E-63 | -1.69E-46 |
| MS.gene059820 | MS.gene91657 | 0.816261 | 6.06E-52 | -1.69E-46 |
| MS.gene059820 | MS.gene92169 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene059820 | MS.gene93819 | 0.800422 | 1.45E-48 | -1.69E-46 |
| MS.gene059820 | MS.gene93869 | 0.855018 | 8.36E-62 | -1.69E-46 |
| MS.gene059820 | MS.gene95383 | 0.812729 | 3.66E-51 | -1.69E-46 |
| MS.gene059820 | MS.gene97211 | 0.83371 | 4.56E-56 | -1.69E-46 |
| MS.gene059820 | MS.gene99638 | 0.866494 | 2.74E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059820.t1 | MTR_2g079300 | 93.682 | 918 | 55 | 2 | 1 | 918 | 1 | 915 | 0.0 | 1650 |
| MS.gene059820.t1 | MTR_2g079310 | 63.588 | 942 | 288 | 18 | 1 | 913 | 18 | 933 | 0.0 | 1078 |
| MS.gene059820.t1 | MTR_2g013640 | 39.434 | 918 | 495 | 23 | 26 | 907 | 38 | 930 | 0.0 | 576 |
| MS.gene059820.t1 | MTR_4g011610 | 30.361 | 415 | 249 | 13 | 499 | 888 | 612 | 1011 | 3.85e-41 | 164 |
| MS.gene059820.t1 | MTR_4g071100 | 80.769 | 52 | 10 | 0 | 625 | 676 | 1 | 52 | 9.02e-23 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059820.t1 | AT4G21700 | 34.921 | 945 | 530 | 26 | 23 | 917 | 51 | 960 | 2.63e-164 | 505 |
| MS.gene059820.t1 | AT1G52780 | 25.443 | 621 | 378 | 24 | 321 | 885 | 419 | 1010 | 7.00e-45 | 176 |
Find 161 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTTGTTGGAGTTGTTTC+TGG | 0.106289 | 2.4:-18448406 | None:intergenic |
| CCCTCTTGTTGCTCCAAATT+TGG | 0.143102 | 2.4:-18449431 | None:intergenic |
| GTTTAACATGTCTTATTATT+TGG | 0.156784 | 2.4:+18449857 | MS.gene059820:CDS |
| GGAAACATCATTAAAGAAAT+TGG | 0.176812 | 2.4:-18448868 | None:intergenic |
| GAAGAATAGGATTAGGGTTT+TGG | 0.219346 | 2.4:+18449161 | MS.gene059820:CDS |
| AAAAGATAGGAGCTATATTA+AGG | 0.225281 | 2.4:+18450031 | MS.gene059820:CDS |
| AAGTAAAGAGGATCGGATTC+TGG | 0.226096 | 2.4:-18450074 | None:intergenic |
| GTAGCATAGTTGGCCAAATT+TGG | 0.228475 | 2.4:+18449418 | MS.gene059820:CDS |
| TTGGAACTTCCACTAATTAT+AGG | 0.235588 | 2.4:-18449087 | None:intergenic |
| CTATAACTATAATTTGCTTT+TGG | 0.237802 | 2.4:-18448889 | None:intergenic |
| TTGAGGCTAATGAGAATAAA+AGG | 0.241298 | 2.4:-18448348 | None:intergenic |
| TCTACTTCTCCTTCTGATTC+AGG | 0.242557 | 2.4:-18451013 | None:intergenic |
| CACATGCTTACGATCTTTAC+AGG | 0.250812 | 2.4:+18450792 | MS.gene059820:CDS |
| TCATCAACATTGATGCTTCT+TGG | 0.268378 | 2.4:+18448491 | MS.gene059820:CDS |
| TCTTTACTTCAAACGTTTAG+AGG | 0.271104 | 2.4:+18450088 | MS.gene059820:CDS |
| AGCAAATTATAGTTATAGTT+TGG | 0.277090 | 2.4:+18448894 | MS.gene059820:CDS |
| TATAATCATCATCATAGTTT+TGG | 0.289132 | 2.4:+18448625 | MS.gene059820:CDS |
| AAAACATAGGTTGTGTTGTT+AGG | 0.295192 | 2.4:-18450350 | None:intergenic |
| AATACCAAAACTATGTTGAT+AGG | 0.297180 | 2.4:+18449240 | MS.gene059820:CDS |
| GAGATGAAGGGAAGCACATT+AGG | 0.300140 | 2.4:-18450248 | None:intergenic |
| CTGAATGAATCAAAGTTTAA+TGG | 0.303797 | 2.4:-18448979 | None:intergenic |
| TTCAAGTAATATAACTAGTT+TGG | 0.303810 | 2.4:+18448786 | MS.gene059820:CDS |
| TTCCCCTATCAACATAGTTT+TGG | 0.311817 | 2.4:-18449244 | None:intergenic |
| AAAAGGGCTTGTTTACATAT+TGG | 0.321294 | 2.4:-18451041 | None:intergenic |
| AACACCAACAGCAAATTCTT+TGG | 0.329524 | 2.4:+18449965 | MS.gene059820:CDS |
| GTTGAAAACGAGTTCTCTTT+TGG | 0.330319 | 2.4:+18448928 | MS.gene059820:CDS |
| CCAGTGTTGTGATCACTTAT+AGG | 0.335832 | 2.4:-18448445 | None:intergenic |
| GTTTCTTGATGGAAAGTATA+AGG | 0.339437 | 2.4:-18448524 | None:intergenic |
| TACTTAACCTTCAAGCTTGA+TGG | 0.343248 | 2.4:+18448649 | MS.gene059820:CDS |
| GATTGAGATTCCCCTCAATT+TGG | 0.347728 | 2.4:+18449379 | MS.gene059820:CDS |
| CATAAAATCTTATGGTGGTT+TGG | 0.357544 | 2.4:+18450658 | MS.gene059820:CDS |
| GTTGCATATGTGTTTCTTGA+TGG | 0.358343 | 2.4:-18448535 | None:intergenic |
| ATAATATGAAGCATCATTGT+TGG | 0.361082 | 2.4:-18448605 | None:intergenic |
| TTATTATTTGGTGAAGATTT+CGG | 0.361226 | 2.4:+18449869 | MS.gene059820:CDS |
| CAGTGTTGTGATCACTTATA+GGG | 0.364678 | 2.4:-18448444 | None:intergenic |
| TCAGGAAATGTTTGCATGGT+TGG | 0.365878 | 2.4:+18448688 | MS.gene059820:CDS |
| ATGGAAAGTATAAGGAGAAT+TGG | 0.368044 | 2.4:-18448516 | None:intergenic |
| ATCTTATGGTGGTTTGGTAT+TGG | 0.370141 | 2.4:+18450664 | MS.gene059820:CDS |
| CTTCTTTAGATACAAAAGAT+AGG | 0.374932 | 2.4:+18450018 | MS.gene059820:CDS |
| AAGAAGAGAGAAGAAATGTT+TGG | 0.375232 | 2.4:+18450135 | MS.gene059820:CDS |
| ATGATGTCGATTCTCACATT+TGG | 0.392229 | 2.4:+18450278 | MS.gene059820:CDS |
| TTGGGATATTATCATTCCTT+TGG | 0.393213 | 2.4:+18450889 | MS.gene059820:CDS |
| GAGTTGAATTTCTTTGTTGT+TGG | 0.393757 | 2.4:-18448418 | None:intergenic |
| TGGGAGAACATAAAATCTTA+TGG | 0.395445 | 2.4:+18450650 | MS.gene059820:CDS |
| AGCATCATTGTTGGTTCTAA+AGG | 0.396449 | 2.4:-18448596 | None:intergenic |
| AGGAATGATGATGCGAATTA+TGG | 0.398589 | 2.4:+18449489 | MS.gene059820:CDS |
| TAGATTTGCTACCATTGAAA+TGG | 0.408296 | 2.4:-18449311 | None:intergenic |
| TTGTTGTTGGAGTTGTTTCT+GGG | 0.412287 | 2.4:-18448405 | None:intergenic |
| AACAAGGAATTCTTGTCAAA+AGG | 0.413713 | 2.4:-18449837 | None:intergenic |
| GAGAAGAAATGTTTGGAGAA+TGG | 0.414023 | 2.4:+18450142 | MS.gene059820:CDS |
| AATTGCACTCCTATAATTAG+TGG | 0.415041 | 2.4:+18449078 | MS.gene059820:CDS |
| AATATAACTAGTTTGGTTAG+TGG | 0.417955 | 2.4:+18448793 | MS.gene059820:CDS |
| AAAGATAGGAGCTATATTAA+GGG | 0.423119 | 2.4:+18450032 | MS.gene059820:CDS |
| AGATGAAGGGAAGCACATTA+GGG | 0.428757 | 2.4:-18450247 | None:intergenic |
| AAGTTAATGAAATAAGTGTT+AGG | 0.433944 | 2.4:+18450396 | MS.gene059820:CDS |
| CATCATGAAAATTGAGATGA+AGG | 0.435480 | 2.4:-18450261 | None:intergenic |
| ATGTCATATGAATATGCATC+TGG | 0.440507 | 2.4:-18449612 | None:intergenic |
| TTCAACATTTCCTAAAACAT+AGG | 0.445636 | 2.4:-18450363 | None:intergenic |
| TGGAGTTGTTTCTGGGATGA+TGG | 0.447557 | 2.4:-18448398 | None:intergenic |
| CCCATGACGGATCATGTTGT+TGG | 0.448985 | 2.4:-18450631 | None:intergenic |
| GCCAAATTTGGAGCAACAAG+AGG | 0.452022 | 2.4:+18449430 | MS.gene059820:CDS |
| ACCTTCCCTTTGTATGCTGT+CGG | 0.452141 | 2.4:+18450539 | MS.gene059820:CDS |
| ACGAAAGCAAGAACAATCTC+TGG | 0.455404 | 2.4:+18450489 | MS.gene059820:CDS |
| AGAGAGTTTGAGTTCTGAAA+AGG | 0.456424 | 2.4:+18448822 | MS.gene059820:CDS |
| TGTTGATAGGGGAAGGATGG+TGG | 0.456878 | 2.4:+18449253 | MS.gene059820:CDS |
| GTTAAAGAAGGATAGAGATT+CGG | 0.464514 | 2.4:+18450586 | MS.gene059820:CDS |
| TGGACGACCAAGTTAGATAC+AGG | 0.464742 | 2.4:-18450457 | None:intergenic |
| TCAAGAAGTGAATTTGATGC+TGG | 0.466884 | 2.4:+18449741 | MS.gene059820:CDS |
| CATATGTGATGGTAATTGAT+TGG | 0.467774 | 2.4:-18449106 | None:intergenic |
| ATACCAAAACTATGTTGATA+GGG | 0.467993 | 2.4:+18449241 | MS.gene059820:CDS |
| ATCAAATTCACTTCTTGAGA+AGG | 0.474088 | 2.4:-18449736 | None:intergenic |
| TTTGATCCTTTGAATCTATG+AGG | 0.475611 | 2.4:-18450974 | None:intergenic |
| GTAGTTCTTTGCCATTTCAA+TGG | 0.476934 | 2.4:+18449300 | MS.gene059820:CDS |
| GGAGTTTATGATTCAAGAGA+TGG | 0.479886 | 2.4:+18449897 | MS.gene059820:CDS |
| GGAATCGTGAACAATGATAA+TGG | 0.480001 | 2.4:+18449762 | MS.gene059820:CDS |
| TCTAAACGTTTGAAGTAAAG+AGG | 0.482986 | 2.4:-18450086 | None:intergenic |
| GATGGAACCTTGTGTATGAT+TGG | 0.483550 | 2.4:+18449915 | MS.gene059820:CDS |
| ATTGCTGTTGAAGTTAAAGA+AGG | 0.484181 | 2.4:+18450574 | MS.gene059820:CDS |
| AGTAAAGAGGATCGGATTCT+GGG | 0.485124 | 2.4:-18450073 | None:intergenic |
| ACTTCAAAACGATAACAGTT+AGG | 0.487221 | 2.4:+18449469 | MS.gene059820:CDS |
| TTGGATCGGCATAGAAGTAT+AGG | 0.492421 | 2.4:-18450844 | None:intergenic |
| CCATCACATATGTCTTTGAA+AGG | 0.493040 | 2.4:+18449117 | MS.gene059820:CDS |
| CTATGTTGATAGGGGAAGGA+TGG | 0.493721 | 2.4:+18449250 | MS.gene059820:CDS |
| AGAAGTATAGGTCATTATCT+TGG | 0.499463 | 2.4:-18450832 | None:intergenic |
| TTCACTTCTTGAGAAGGAAA+CGG | 0.499973 | 2.4:-18449730 | None:intergenic |
| CATCACATATGTCTTTGAAA+GGG | 0.501788 | 2.4:+18449118 | MS.gene059820:CDS |
| TAATGAGAATAAAAGGTTGA+AGG | 0.501964 | 2.4:-18448341 | None:intergenic |
| CATAGATTCAAAGGATCAAA+GGG | 0.508834 | 2.4:+18450977 | MS.gene059820:CDS |
| AGGAAACGGAAGATGTAGAT+TGG | 0.511543 | 2.4:-18449716 | None:intergenic |
| TATGGTGGTTTGGTATTGGA+TGG | 0.513398 | 2.4:+18450668 | MS.gene059820:CDS |
| AGGGCTTGTTTACATATTGG+TGG | 0.515837 | 2.4:-18451038 | None:intergenic |
| AATGGACATGGAAGTTATCA+TGG | 0.516707 | 2.4:+18450160 | MS.gene059820:CDS |
| TGACATGAAATTTGATATGT+CGG | 0.517094 | 2.4:+18449629 | MS.gene059820:CDS |
| TGGTAGCAAATCTACATCCT+TGG | 0.517238 | 2.4:+18449320 | MS.gene059820:CDS |
| GATATTATCATTCCTTTGGT+AGG | 0.519992 | 2.4:+18450893 | MS.gene059820:CDS |
| TTGTTGAGAACCAAGGGAAA+AGG | 0.520792 | 2.4:+18449586 | MS.gene059820:CDS |
| CATTAGGGTTTCTCTTCACA+TGG | 0.524442 | 2.4:-18450232 | None:intergenic |
| GTTGATAGGGGAAGGATGGT+GGG | 0.524493 | 2.4:+18449254 | MS.gene059820:CDS |
| ATTGATTAACTCTACCAAGT+TGG | 0.524619 | 2.4:-18449545 | None:intergenic |
| TCATAGATTCAAAGGATCAA+AGG | 0.525867 | 2.4:+18450976 | MS.gene059820:CDS |
| AGCAAATCTACATCCTTGGA+TGG | 0.528221 | 2.4:+18449324 | MS.gene059820:CDS |
| TACTCATCATCAACAAATGA+AGG | 0.529729 | 2.4:-18449693 | None:intergenic |
| ATCTTCAGGAAATGTTTGCA+TGG | 0.535353 | 2.4:+18448684 | MS.gene059820:CDS |
| CCGTGACCTTGTGTCAAACA+AGG | 0.541599 | 2.4:+18449941 | MS.gene059820:CDS |
| GTGTTCCCTTGTTTGACACA+AGG | 0.543475 | 2.4:-18449947 | None:intergenic |
| TTCTCAACAACTTTGTGTCG+TGG | 0.548134 | 2.4:-18449573 | None:intergenic |
| ATAATCCGACAGCATACAAA+GGG | 0.550306 | 2.4:-18450544 | None:intergenic |
| TCCGTCTCCTGTATCTAACT+TGG | 0.554874 | 2.4:+18450450 | MS.gene059820:CDS |
| AGGTATGAATATAGCCAACT+TGG | 0.561427 | 2.4:+18449531 | MS.gene059820:CDS |
| CCTTGTTTGACACAAGGTCA+CGG | 0.563302 | 2.4:-18449941 | None:intergenic |
| TTGGTGAAGATTTCGGCAGA+AGG | 0.566368 | 2.4:+18449876 | MS.gene059820:CDS |
| AAAACTATGTTGATAGGGGA+AGG | 0.567626 | 2.4:+18449246 | MS.gene059820:CDS |
| GTCAAAAGGCGAAGAAGACA+TGG | 0.571754 | 2.4:-18449823 | None:intergenic |
| CCAAATTTGGAGCAACAAGA+GGG | 0.573396 | 2.4:+18449431 | MS.gene059820:CDS |
| GTTCTGCCTCATAGATTCAA+AGG | 0.574597 | 2.4:+18450968 | MS.gene059820:CDS |
| GCTTCGAAATTGAGAACAAG+TGG | 0.574778 | 2.4:-18450311 | None:intergenic |
| ACTCATGAGTGTACTCTAGT+TGG | 0.574884 | 2.4:-18449041 | None:intergenic |
| GATGATGCGAATTATGGTGT+GGG | 0.575675 | 2.4:+18449495 | MS.gene059820:CDS |
| CACAACACTGGTTACTACAT+AGG | 0.579831 | 2.4:+18448457 | MS.gene059820:CDS |
| ACCAACAACATGATCCGTCA+TGG | 0.584585 | 2.4:+18450630 | MS.gene059820:CDS |
| ACGTTTGAAGTAAAGAGGAT+CGG | 0.584769 | 2.4:-18450081 | None:intergenic |
| TAGTGATGATGATGAGGATG+AGG | 0.585316 | 2.4:+18448951 | MS.gene059820:CDS |
| TTGGTAGACTTGGTACATTG+AGG | 0.586290 | 2.4:-18450612 | None:intergenic |
| GATCATGTTGTTGGTAGACT+TGG | 0.589452 | 2.4:-18450622 | None:intergenic |
| AAATGTTTGGAGAATGGACA+TGG | 0.592263 | 2.4:+18450148 | MS.gene059820:CDS |
| ATCATCAACAAATGAAGGAG+AGG | 0.594337 | 2.4:-18449688 | None:intergenic |
| ATCATGAAAATTGAGATGAA+GGG | 0.595539 | 2.4:-18450260 | None:intergenic |
| AATAATCCGACAGCATACAA+AGG | 0.597844 | 2.4:-18450545 | None:intergenic |
| CACAAAGTTGTTGAGAACCA+AGG | 0.597900 | 2.4:+18449579 | MS.gene059820:CDS |
| CAGTCCAAAGAATTTGCTGT+TGG | 0.600317 | 2.4:-18449969 | None:intergenic |
| TACCAAAACTATGTTGATAG+GGG | 0.601461 | 2.4:+18449242 | MS.gene059820:CDS |
| TCCTTGGATGGGACTCATGT+TGG | 0.604490 | 2.4:+18449336 | MS.gene059820:CDS |
| ATGATGCGAATTATGGTGTG+GGG | 0.605495 | 2.4:+18449496 | MS.gene059820:CDS |
| CCTATAAGTGATCACAACAC+TGG | 0.606253 | 2.4:+18448445 | MS.gene059820:CDS |
| GCAAAGGTGCCTGAATCAGA+AGG | 0.607537 | 2.4:+18451004 | MS.gene059820:CDS |
| AACAAGTTCAGAATTACTTG+TGG | 0.608075 | 2.4:-18450701 | None:intergenic |
| ACATGCTTACGATCTTTACA+GGG | 0.611348 | 2.4:+18450793 | MS.gene059820:CDS |
| AACACTGGTTACTACATAGG+AGG | 0.611864 | 2.4:+18448460 | MS.gene059820:CDS |
| CCTTTCAAAGACATATGTGA+TGG | 0.614605 | 2.4:-18449117 | None:intergenic |
| CCAACAACATGATCCGTCAT+GGG | 0.615320 | 2.4:+18450631 | MS.gene059820:CDS |
| ACCAACATGAGTCCCATCCA+AGG | 0.619005 | 2.4:-18449337 | None:intergenic |
| ACAAAGTTGTTGAGAACCAA+GGG | 0.619367 | 2.4:+18449580 | MS.gene059820:CDS |
| GCAAATCTACATCCTTGGAT+GGG | 0.620508 | 2.4:+18449325 | MS.gene059820:CDS |
| TGGAATAGGAATAATAGCCA+AGG | 0.625611 | 2.4:+18449213 | MS.gene059820:CDS |
| AGGATCAAAGGGATATGCAA+AGG | 0.628643 | 2.4:+18450988 | MS.gene059820:CDS |
| TGATGCGAATTATGGTGTGG+GGG | 0.633895 | 2.4:+18449497 | MS.gene059820:CDS |
| TCCGACAGCATACAAAGGGA+AGG | 0.634652 | 2.4:-18450540 | None:intergenic |
| AAGTGTTAGGCTAATCAGCA+TGG | 0.635759 | 2.4:+18450409 | MS.gene059820:CDS |
| GATGCGAATTATGGTGTGGG+GGG | 0.637941 | 2.4:+18449498 | MS.gene059820:CDS |
| CTTCTAATAGCACTTGAGAG+AGG | 0.638727 | 2.4:-18449015 | None:intergenic |
| TGATGATGCGAATTATGGTG+TGG | 0.642288 | 2.4:+18449494 | MS.gene059820:CDS |
| GAGAACATAAAATCTTATGG+TGG | 0.645989 | 2.4:+18450653 | MS.gene059820:CDS |
| GCAAGTACAATACCTACCAA+AGG | 0.646564 | 2.4:-18450905 | None:intergenic |
| AGTGATGATGATGAGGATGA+GGG | 0.648880 | 2.4:+18448952 | MS.gene059820:CDS |
| CTGTAAAGATCGTAAGCATG+TGG | 0.656477 | 2.4:-18450791 | None:intergenic |
| CGTGACCTTGTGTCAAACAA+GGG | 0.663371 | 2.4:+18449942 | MS.gene059820:CDS |
| ACCAAGTTAGATACAGGAGA+CGG | 0.666053 | 2.4:-18450451 | None:intergenic |
| ATAATAAGACATGTTAAACA+AGG | 0.673949 | 2.4:-18449853 | None:intergenic |
| GCGAAGAAGACATGGCTGAG+AGG | 0.686145 | 2.4:-18449815 | None:intergenic |
| CAAACGTTTAGAGGTATCTG+CGG | 0.688357 | 2.4:+18450097 | MS.gene059820:CDS |
| ACGGCAACCAATCATACACA+AGG | 0.708091 | 2.4:-18449922 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAAGAATAGGATTA+GGG | + | chr2.4:18449155-18449174 | MS.gene059820:CDS | 20.0% |
| !! | AAGTTAATGAAATAAGTGTT+AGG | + | chr2.4:18450396-18450415 | MS.gene059820:CDS | 20.0% |
| !! | AGCAAATTATAGTTATAGTT+TGG | + | chr2.4:18448894-18448913 | MS.gene059820:CDS | 20.0% |
| !! | ATAATAAGACATGTTAAACA+AGG | - | chr2.4:18449856-18449875 | None:intergenic | 20.0% |
| !! | TTCAAGTAATATAACTAGTT+TGG | + | chr2.4:18448786-18448805 | MS.gene059820:CDS | 20.0% |
| !!! | AAGATTTTTACTCAACTTAT+TGG | + | chr2.4:18450870-18450889 | MS.gene059820:CDS | 20.0% |
| !!! | AATAAGTTGAGTAAAAATCT+TGG | - | chr2.4:18450871-18450890 | None:intergenic | 20.0% |
| !!! | AGATTTTTACTCAACTTATT+GGG | + | chr2.4:18450871-18450890 | MS.gene059820:CDS | 20.0% |
| !!! | CTATAACTATAATTTGCTTT+TGG | - | chr2.4:18448892-18448911 | None:intergenic | 20.0% |
| !!! | GTTTAACATGTCTTATTATT+TGG | + | chr2.4:18449857-18449876 | MS.gene059820:CDS | 20.0% |
| !!! | TATAATCATCATCATAGTTT+TGG | + | chr2.4:18448625-18448644 | MS.gene059820:CDS | 20.0% |
| !!! | TATCTTTTGTATCTAAAGAA+GGG | - | chr2.4:18450019-18450038 | None:intergenic | 20.0% |
| !!! | TTATTATTTGGTGAAGATTT+CGG | + | chr2.4:18449869-18449888 | MS.gene059820:CDS | 20.0% |
| !!! | TTTTAGGAAATGTTGAAAAA+TGG | + | chr2.4:18450369-18450388 | MS.gene059820:CDS | 20.0% |
| ! | AAAAATAGTAGTAGCATAGT+TGG | + | chr2.4:18449408-18449427 | MS.gene059820:CDS | 25.0% |
| ! | AAAAGATAGGAGCTATATTA+AGG | + | chr2.4:18450031-18450050 | MS.gene059820:CDS | 25.0% |
| ! | AAAGATAGGAGCTATATTAA+GGG | + | chr2.4:18450032-18450051 | MS.gene059820:CDS | 25.0% |
| ! | AATACCAAAACTATGTTGAT+AGG | + | chr2.4:18449240-18449259 | MS.gene059820:CDS | 25.0% |
| ! | ATACCAAAACTATGTTGATA+GGG | + | chr2.4:18449241-18449260 | MS.gene059820:CDS | 25.0% |
| ! | ATCATGAAAATTGAGATGAA+GGG | - | chr2.4:18450263-18450282 | None:intergenic | 25.0% |
| ! | CAAAAAAGAAGAATAGGATT+AGG | + | chr2.4:18449154-18449173 | MS.gene059820:CDS | 25.0% |
| ! | CTGAATGAATCAAAGTTTAA+TGG | - | chr2.4:18448982-18449001 | None:intergenic | 25.0% |
| ! | CTTCTTTAGATACAAAAGAT+AGG | + | chr2.4:18450018-18450037 | MS.gene059820:CDS | 25.0% |
| ! | GGAAACATCATTAAAGAAAT+TGG | - | chr2.4:18448871-18448890 | None:intergenic | 25.0% |
| ! | GTTCTTCAAAAAAGAAGAAT+AGG | + | chr2.4:18449148-18449167 | MS.gene059820:CDS | 25.0% |
| ! | TAATGAGAATAAAAGGTTGA+AGG | - | chr2.4:18448344-18448363 | None:intergenic | 25.0% |
| ! | TGACATGAAATTTGATATGT+CGG | + | chr2.4:18449629-18449648 | MS.gene059820:CDS | 25.0% |
| ! | TTCAACATTTCCTAAAACAT+AGG | - | chr2.4:18450366-18450385 | None:intergenic | 25.0% |
| !! | AATATAACTAGTTTGGTTAG+TGG | + | chr2.4:18448793-18448812 | MS.gene059820:CDS | 25.0% |
| !! | ATAATATGAAGCATCATTGT+TGG | - | chr2.4:18448608-18448627 | None:intergenic | 25.0% |
| !! | CTATCTTTTGTATCTAAAGA+AGG | - | chr2.4:18450020-18450039 | None:intergenic | 25.0% |
| !! | TTCTTTGTAAGATGATTTTG+AGG | - | chr2.4:18448368-18448387 | None:intergenic | 25.0% |
| !!! | CGAATAGTTTTGATTACTAT+TGG | + | chr2.4:18449193-18449212 | MS.gene059820:CDS | 25.0% |
| !!! | GTTTTGATTACTATTGGAAT+AGG | + | chr2.4:18449199-18449218 | MS.gene059820:CDS | 25.0% |
| AACAAGGAATTCTTGTCAAA+AGG | - | chr2.4:18449840-18449859 | None:intergenic | 30.0% | |
| AACAAGTTCAGAATTACTTG+TGG | - | chr2.4:18450704-18450723 | None:intergenic | 30.0% | |
| AAGAAGAGAGAAGAAATGTT+TGG | + | chr2.4:18450135-18450154 | MS.gene059820:CDS | 30.0% | |
| AATTGCACTCCTATAATTAG+TGG | + | chr2.4:18449078-18449097 | MS.gene059820:CDS | 30.0% | |
| ACTTCAAAACGATAACAGTT+AGG | + | chr2.4:18449469-18449488 | MS.gene059820:CDS | 30.0% | |
| ATCAAATTCACTTCTTGAGA+AGG | - | chr2.4:18449739-18449758 | None:intergenic | 30.0% | |
| ATGTCATATGAATATGCATC+TGG | - | chr2.4:18449615-18449634 | None:intergenic | 30.0% | |
| ATTGATTAACTCTACCAAGT+TGG | - | chr2.4:18449548-18449567 | None:intergenic | 30.0% | |
| CATAAAATCTTATGGTGGTT+TGG | + | chr2.4:18450658-18450677 | MS.gene059820:CDS | 30.0% | |
| CATAGATTCAAAGGATCAAA+GGG | + | chr2.4:18450977-18450996 | MS.gene059820:CDS | 30.0% | |
| CATATGTGATGGTAATTGAT+TGG | - | chr2.4:18449109-18449128 | None:intergenic | 30.0% | |
| CATCATGAAAATTGAGATGA+AGG | - | chr2.4:18450264-18450283 | None:intergenic | 30.0% | |
| GAGAACATAAAATCTTATGG+TGG | + | chr2.4:18450653-18450672 | MS.gene059820:CDS | 30.0% | |
| GATATTATCATTCCTTTGGT+AGG | + | chr2.4:18450893-18450912 | MS.gene059820:CDS | 30.0% | |
| GTTAAAGAAGGATAGAGATT+CGG | + | chr2.4:18450586-18450605 | MS.gene059820:CDS | 30.0% | |
| TACTCATCATCAACAAATGA+AGG | - | chr2.4:18449696-18449715 | None:intergenic | 30.0% | |
| TCATAGATTCAAAGGATCAA+AGG | + | chr2.4:18450976-18450995 | MS.gene059820:CDS | 30.0% | |
| TCTTTACTTCAAACGTTTAG+AGG | + | chr2.4:18450088-18450107 | MS.gene059820:CDS | 30.0% | |
| TGGGAGAACATAAAATCTTA+TGG | + | chr2.4:18450650-18450669 | MS.gene059820:CDS | 30.0% | |
| TTGAGGCTAATGAGAATAAA+AGG | - | chr2.4:18448351-18448370 | None:intergenic | 30.0% | |
| TTGGAACTTCCACTAATTAT+AGG | - | chr2.4:18449090-18449109 | None:intergenic | 30.0% | |
| TTGGGATATTATCATTCCTT+TGG | + | chr2.4:18450889-18450908 | MS.gene059820:CDS | 30.0% | |
| TTTGATCCTTTGAATCTATG+AGG | - | chr2.4:18450977-18450996 | None:intergenic | 30.0% | |
| ! | AAAACATAGGTTGTGTTGTT+AGG | - | chr2.4:18450353-18450372 | None:intergenic | 30.0% |
| ! | AACAACACAACCTATGTTTT+AGG | + | chr2.4:18450353-18450372 | MS.gene059820:CDS | 30.0% |
| ! | AAGAATAGGATTAGGGTTTT+GGG | + | chr2.4:18449162-18449181 | MS.gene059820:CDS | 30.0% |
| ! | AGAAGTATAGGTCATTATCT+TGG | - | chr2.4:18450835-18450854 | None:intergenic | 30.0% |
| ! | ATGGAAAGTATAAGGAGAAT+TGG | - | chr2.4:18448519-18448538 | None:intergenic | 30.0% |
| ! | ATTGCTGTTGAAGTTAAAGA+AGG | + | chr2.4:18450574-18450593 | MS.gene059820:CDS | 30.0% |
| ! | ATTTTTGATCGACCAAATTG+AGG | - | chr2.4:18449394-18449413 | None:intergenic | 30.0% |
| ! | CATCACATATGTCTTTGAAA+GGG | + | chr2.4:18449118-18449137 | MS.gene059820:CDS | 30.0% |
| ! | CTTTCATGCTCATTTTACTT+TGG | + | chr2.4:18450746-18450765 | MS.gene059820:CDS | 30.0% |
| ! | GAGTTGAATTTCTTTGTTGT+TGG | - | chr2.4:18448421-18448440 | None:intergenic | 30.0% |
| ! | GTTTCTTGATGGAAAGTATA+AGG | - | chr2.4:18448527-18448546 | None:intergenic | 30.0% |
| ! | TACCAAAACTATGTTGATAG+GGG | + | chr2.4:18449242-18449261 | MS.gene059820:CDS | 30.0% |
| ! | TCTAAACGTTTGAAGTAAAG+AGG | - | chr2.4:18450089-18450108 | None:intergenic | 30.0% |
| ! | TTTTTGATCGACCAAATTGA+GGG | - | chr2.4:18449393-18449412 | None:intergenic | 30.0% |
| !! | TAGATTTGCTACCATTGAAA+TGG | - | chr2.4:18449314-18449333 | None:intergenic | 30.0% |
| !! | TAGTGCCTTCAATTTTGAAA+AGG | - | chr2.4:18448573-18448592 | None:intergenic | 30.0% |
| !!! | ATCTACTTGCAGCAATTTTT+TGG | + | chr2.4:18450935-18450954 | MS.gene059820:CDS | 30.0% |
| AAATGTTTGGAGAATGGACA+TGG | + | chr2.4:18450148-18450167 | MS.gene059820:CDS | 35.0% | |
| AACACCAACAGCAAATTCTT+TGG | + | chr2.4:18449965-18449984 | MS.gene059820:CDS | 35.0% | |
| AATAATCCGACAGCATACAA+AGG | - | chr2.4:18450548-18450567 | None:intergenic | 35.0% | |
| AATGGACATGGAAGTTATCA+TGG | + | chr2.4:18450160-18450179 | MS.gene059820:CDS | 35.0% | |
| ACAAAGTTGTTGAGAACCAA+GGG | + | chr2.4:18449580-18449599 | MS.gene059820:CDS | 35.0% | |
| ACATGCTTACGATCTTTACA+GGG | + | chr2.4:18450793-18450812 | MS.gene059820:CDS | 35.0% | |
| AGGTATGAATATAGCCAACT+TGG | + | chr2.4:18449531-18449550 | MS.gene059820:CDS | 35.0% | |
| AGTCCAAAAAAAGAGTAGCT+TGG | + | chr2.4:18449658-18449677 | MS.gene059820:CDS | 35.0% | |
| ATAATCCGACAGCATACAAA+GGG | - | chr2.4:18450547-18450566 | None:intergenic | 35.0% | |
| ATCATCAACAAATGAAGGAG+AGG | - | chr2.4:18449691-18449710 | None:intergenic | 35.0% | |
| ATCTTCAGGAAATGTTTGCA+TGG | + | chr2.4:18448684-18448703 | MS.gene059820:CDS | 35.0% | |
| CAGTGTTGTGATCACTTATA+GGG | - | chr2.4:18448447-18448466 | None:intergenic | 35.0% | |
| CCATCACATATGTCTTTGAA+AGG | + | chr2.4:18449117-18449136 | MS.gene059820:CDS | 35.0% | |
| CCTTTCAAAGACATATGTGA+TGG | - | chr2.4:18449120-18449139 | None:intergenic | 35.0% | |
| GAGAAGAAATGTTTGGAGAA+TGG | + | chr2.4:18450142-18450161 | MS.gene059820:CDS | 35.0% | |
| GGAATCGTGAACAATGATAA+TGG | + | chr2.4:18449762-18449781 | MS.gene059820:CDS | 35.0% | |
| GGAGTTTATGATTCAAGAGA+TGG | + | chr2.4:18449897-18449916 | MS.gene059820:CDS | 35.0% | |
| GTCCAAAAAAAGAGTAGCTT+GGG | + | chr2.4:18449659-18449678 | MS.gene059820:CDS | 35.0% | |
| GTTGAGTAAAAATCTTGGCT+TGG | - | chr2.4:18450866-18450885 | None:intergenic | 35.0% | |
| GTTGCATATGTGTTTCTTGA+TGG | - | chr2.4:18448538-18448557 | None:intergenic | 35.0% | |
| TACTTAACCTTCAAGCTTGA+TGG | + | chr2.4:18448649-18448668 | MS.gene059820:CDS | 35.0% | |
| TCAAGAAGTGAATTTGATGC+TGG | + | chr2.4:18449741-18449760 | MS.gene059820:CDS | 35.0% | |
| TCATCAACATTGATGCTTCT+TGG | + | chr2.4:18448491-18448510 | MS.gene059820:CDS | 35.0% | |
| TCCAAAAAAAGAGTAGCTTG+GGG | + | chr2.4:18449660-18449679 | MS.gene059820:CDS | 35.0% | |
| TGGAATAGGAATAATAGCCA+AGG | + | chr2.4:18449213-18449232 | MS.gene059820:CDS | 35.0% | |
| TTCACTTCTTGAGAAGGAAA+CGG | - | chr2.4:18449733-18449752 | None:intergenic | 35.0% | |
| ! | AAAACTATGTTGATAGGGGA+AGG | + | chr2.4:18449246-18449265 | MS.gene059820:CDS | 35.0% |
| ! | ACGTTTGAAGTAAAGAGGAT+CGG | - | chr2.4:18450084-18450103 | None:intergenic | 35.0% |
| ! | AGAATAGGATTAGGGTTTTG+GGG | + | chr2.4:18449163-18449182 | MS.gene059820:CDS | 35.0% |
| ! | AGGAATGATGATGCGAATTA+TGG | + | chr2.4:18449489-18449508 | MS.gene059820:CDS | 35.0% |
| ! | CACATATGAAGCTTTTCTCT+CGG | - | chr2.4:18450519-18450538 | None:intergenic | 35.0% |
| ! | CCTCACCTTTTCAAAATTGA+AGG | + | chr2.4:18448565-18448584 | MS.gene059820:CDS | 35.0% |
| ! | GAAGAATAGGATTAGGGTTT+TGG | + | chr2.4:18449161-18449180 | MS.gene059820:CDS | 35.0% |
| ! | GATTTTATGTTCTCCCATGA+CGG | - | chr2.4:18450647-18450666 | None:intergenic | 35.0% |
| ! | GTAGTTCTTTGCCATTTCAA+TGG | + | chr2.4:18449300-18449319 | MS.gene059820:CDS | 35.0% |
| ! | GTTGAAAACGAGTTCTCTTT+TGG | + | chr2.4:18448928-18448947 | MS.gene059820:CDS | 35.0% |
| ! | TTCCCCTATCAACATAGTTT+TGG | - | chr2.4:18449247-18449266 | None:intergenic | 35.0% |
| ! | TTTTGATCGACCAAATTGAG+GGG | - | chr2.4:18449392-18449411 | None:intergenic | 35.0% |
| !! | AGAGAGTTTGAGTTCTGAAA+AGG | + | chr2.4:18448822-18448841 | MS.gene059820:CDS | 35.0% |
| !! | AGCAAAGGTGTTTCGAAAAA+AGG | + | chr2.4:18448715-18448734 | MS.gene059820:CDS | 35.0% |
| !! | AGCATCATTGTTGGTTCTAA+AGG | - | chr2.4:18448599-18448618 | None:intergenic | 35.0% |
| !! | ATCTTATGGTGGTTTGGTAT+TGG | + | chr2.4:18450664-18450683 | MS.gene059820:CDS | 35.0% |
| !! | ATGATGTCGATTCTCACATT+TGG | + | chr2.4:18450278-18450297 | MS.gene059820:CDS | 35.0% |
| !! | CCTTCAATTTTGAAAAGGTG+AGG | - | chr2.4:18448568-18448587 | None:intergenic | 35.0% |
| !! | GTAAAAATCTTGGCTTGGAT+CGG | - | chr2.4:18450861-18450880 | None:intergenic | 35.0% |
| !! | TTGTTGTTGGAGTTGTTTCT+GGG | - | chr2.4:18448408-18448427 | None:intergenic | 35.0% |
| !! | TTTGTTGTTGGAGTTGTTTC+TGG | - | chr2.4:18448409-18448428 | None:intergenic | 35.0% |
| !!! | TAGTTTTGGTATTGAAGCCT+TGG | - | chr2.4:18449233-18449252 | None:intergenic | 35.0% |
| !!! | TTTTGGTAGTGATGATGATG+AGG | + | chr2.4:18448945-18448964 | MS.gene059820:CDS | 35.0% |
| AAGTAAAGAGGATCGGATTC+TGG | - | chr2.4:18450077-18450096 | None:intergenic | 40.0% | |
| AAGTGTTAGGCTAATCAGCA+TGG | + | chr2.4:18450409-18450428 | MS.gene059820:CDS | 40.0% | |
| ACCAAGTTAGATACAGGAGA+CGG | - | chr2.4:18450454-18450473 | None:intergenic | 40.0% | |
| ACGAAAGCAAGAACAATCTC+TGG | + | chr2.4:18450489-18450508 | MS.gene059820:CDS | 40.0% | |
| ACTCATGAGTGTACTCTAGT+TGG | - | chr2.4:18449044-18449063 | None:intergenic | 40.0% | |
| AGCAAATCTACATCCTTGGA+TGG | + | chr2.4:18449324-18449343 | MS.gene059820:CDS | 40.0% | |
| AGGAAACGGAAGATGTAGAT+TGG | - | chr2.4:18449719-18449738 | None:intergenic | 40.0% | |
| AGGATCAAAGGGATATGCAA+AGG | + | chr2.4:18450988-18451007 | MS.gene059820:CDS | 40.0% | |
| AGTAAAGAGGATCGGATTCT+GGG | - | chr2.4:18450076-18450095 | None:intergenic | 40.0% | |
| ATGATGCGAATTATGGTGTG+GGG | + | chr2.4:18449496-18449515 | MS.gene059820:CDS | 40.0% | |
| CACAAAGTTGTTGAGAACCA+AGG | + | chr2.4:18449579-18449598 | MS.gene059820:CDS | 40.0% | |
| CACATGCTTACGATCTTTAC+AGG | + | chr2.4:18450792-18450811 | MS.gene059820:CDS | 40.0% | |
| CATTAGGGTTTCTCTTCACA+TGG | - | chr2.4:18450235-18450254 | None:intergenic | 40.0% | |
| CCAAAAACCATCAAGCTTGA+AGG | - | chr2.4:18448659-18448678 | None:intergenic | 40.0% | |
| CCAGTGTTGTGATCACTTAT+AGG | - | chr2.4:18448448-18448467 | None:intergenic | 40.0% | |
| CCTATAAGTGATCACAACAC+TGG | + | chr2.4:18448445-18448464 | MS.gene059820:CDS | 40.0% | |
| CTGTAAAGATCGTAAGCATG+TGG | - | chr2.4:18450794-18450813 | None:intergenic | 40.0% | |
| CTTCTAATAGCACTTGAGAG+AGG | - | chr2.4:18449018-18449037 | None:intergenic | 40.0% | |
| GATGATGCGAATTATGGTGT+GGG | + | chr2.4:18449495-18449514 | MS.gene059820:CDS | 40.0% | |
| GATGGAACCTTGTGTATGAT+TGG | + | chr2.4:18449915-18449934 | MS.gene059820:CDS | 40.0% | |
| GATTGAGATTCCCCTCAATT+TGG | + | chr2.4:18449379-18449398 | MS.gene059820:CDS | 40.0% | |
| GCAAATCTACATCCTTGGAT+GGG | + | chr2.4:18449325-18449344 | MS.gene059820:CDS | 40.0% | |
| GCAAGTACAATACCTACCAA+AGG | - | chr2.4:18450908-18450927 | None:intergenic | 40.0% | |
| GCTTCGAAATTGAGAACAAG+TGG | - | chr2.4:18450314-18450333 | None:intergenic | 40.0% | |
| GTAGCATAGTTGGCCAAATT+TGG | + | chr2.4:18449418-18449437 | MS.gene059820:CDS | 40.0% | |
| GTTCTGCCTCATAGATTCAA+AGG | + | chr2.4:18450968-18450987 | MS.gene059820:CDS | 40.0% | |
| TCAGGAAATGTTTGCATGGT+TGG | + | chr2.4:18448688-18448707 | MS.gene059820:CDS | 40.0% | |
| TCTACTTCTCCTTCTGATTC+AGG | - | chr2.4:18451016-18451035 | None:intergenic | 40.0% | |
| TGCATGGTTGGAAAAAGCAA+AGG | + | chr2.4:18448700-18448719 | MS.gene059820:CDS | 40.0% | |
| TGGTAGCAAATCTACATCCT+TGG | + | chr2.4:18449320-18449339 | MS.gene059820:CDS | 40.0% | |
| TTCTCAACAACTTTGTGTCG+TGG | - | chr2.4:18449576-18449595 | None:intergenic | 40.0% | |
| TTGTTGAGAACCAAGGGAAA+AGG | + | chr2.4:18449586-18449605 | MS.gene059820:CDS | 40.0% | |
| ! | AACACTGGTTACTACATAGG+AGG | + | chr2.4:18448460-18448479 | MS.gene059820:CDS | 40.0% |
| ! | ACTCTAGCATGTGTTTTCGT+CGG | + | chr2.4:18450197-18450216 | MS.gene059820:CDS | 40.0% |
| ! | AGATGAAGGGAAGCACATTA+GGG | - | chr2.4:18450250-18450269 | None:intergenic | 40.0% |
| ! | AGTGATGATGATGAGGATGA+GGG | + | chr2.4:18448952-18448971 | MS.gene059820:CDS | 40.0% |
| ! | CACAACACTGGTTACTACAT+AGG | + | chr2.4:18448457-18448476 | MS.gene059820:CDS | 40.0% |
| ! | CCAAATTTGGAGCAACAAGA+GGG | + | chr2.4:18449431-18449450 | MS.gene059820:CDS | 40.0% |
| ! | CTTGCTTTCGTCAGTTTTTC+TGG | - | chr2.4:18450480-18450499 | None:intergenic | 40.0% |
| ! | GATCATGTTGTTGGTAGACT+TGG | - | chr2.4:18450625-18450644 | None:intergenic | 40.0% |
| ! | TAGTGATGATGATGAGGATG+AGG | + | chr2.4:18448951-18448970 | MS.gene059820:CDS | 40.0% |
| ! | TGATGATGCGAATTATGGTG+TGG | + | chr2.4:18449494-18449513 | MS.gene059820:CDS | 40.0% |
| ! | TTGGATCGGCATAGAAGTAT+AGG | - | chr2.4:18450847-18450866 | None:intergenic | 40.0% |
| ! | TTGGTAGACTTGGTACATTG+AGG | - | chr2.4:18450615-18450634 | None:intergenic | 40.0% |
| !! | CAAACGTTTAGAGGTATCTG+CGG | + | chr2.4:18450097-18450116 | MS.gene059820:CDS | 40.0% |
| !! | CAGTCCAAAGAATTTGCTGT+TGG | - | chr2.4:18449972-18449991 | None:intergenic | 40.0% |
| !! | CCTTCAAGCTTGATGGTTTT+TGG | + | chr2.4:18448656-18448675 | MS.gene059820:CDS | 40.0% |
| !! | GAATAGGATTAGGGTTTTGG+GGG | + | chr2.4:18449164-18449183 | MS.gene059820:CDS | 40.0% |
| !! | TATGGTGGTTTGGTATTGGA+TGG | + | chr2.4:18450668-18450687 | MS.gene059820:CDS | 40.0% |
| !!! | ACCCCAAGCTACTCTTTTTT+TGG | - | chr2.4:18449664-18449683 | None:intergenic | 40.0% |
| !!! | GGTTTTTGGTCTCAATCTTC+AGG | + | chr2.4:18448670-18448689 | MS.gene059820:CDS | 40.0% |
| ACCAACAACATGATCCGTCA+TGG | + | chr2.4:18450630-18450649 | MS.gene059820:CDS | 45.0% | |
| ACCTTCCCTTTGTATGCTGT+CGG | + | chr2.4:18450539-18450558 | MS.gene059820:CDS | 45.0% | |
| ACGGCAACCAATCATACACA+AGG | - | chr2.4:18449925-18449944 | None:intergenic | 45.0% | |
| CCAACAACATGATCCGTCAT+GGG | + | chr2.4:18450631-18450650 | MS.gene059820:CDS | 45.0% | |
| CCCTCTTGTTGCTCCAAATT+TGG | - | chr2.4:18449434-18449453 | None:intergenic | 45.0% | |
| CGTGACCTTGTGTCAAACAA+GGG | + | chr2.4:18449942-18449961 | MS.gene059820:CDS | 45.0% | |
| GTCAAAAGGCGAAGAAGACA+TGG | - | chr2.4:18449826-18449845 | None:intergenic | 45.0% | |
| TCCGTCTCCTGTATCTAACT+TGG | + | chr2.4:18450450-18450469 | MS.gene059820:CDS | 45.0% | |
| TGATGCGAATTATGGTGTGG+GGG | + | chr2.4:18449497-18449516 | MS.gene059820:CDS | 45.0% | |
| TGGACGACCAAGTTAGATAC+AGG | - | chr2.4:18450460-18450479 | None:intergenic | 45.0% | |
| TTGGTGAAGATTTCGGCAGA+AGG | + | chr2.4:18449876-18449895 | MS.gene059820:CDS | 45.0% | |
| ! | CATCTGGATACCTTTTCCCT+TGG | - | chr2.4:18449599-18449618 | None:intergenic | 45.0% |
| ! | CCTTGTTTGACACAAGGTCA+CGG | - | chr2.4:18449944-18449963 | None:intergenic | 45.0% |
| ! | CTATGTTGATAGGGGAAGGA+TGG | + | chr2.4:18449250-18449269 | MS.gene059820:CDS | 45.0% |
| ! | GAGATGAAGGGAAGCACATT+AGG | - | chr2.4:18450251-18450270 | None:intergenic | 45.0% |
| ! | GCCAAATTTGGAGCAACAAG+AGG | + | chr2.4:18449430-18449449 | MS.gene059820:CDS | 45.0% |
| ! | GTGTTCCCTTGTTTGACACA+AGG | - | chr2.4:18449950-18449969 | None:intergenic | 45.0% |
| !! | TGGAGTTGTTTCTGGGATGA+TGG | - | chr2.4:18448401-18448420 | None:intergenic | 45.0% |
| ACCAACATGAGTCCCATCCA+AGG | - | chr2.4:18449340-18449359 | None:intergenic | 50.0% | |
| CCGTGACCTTGTGTCAAACA+AGG | + | chr2.4:18449941-18449960 | MS.gene059820:CDS | 50.0% | |
| GATGCGAATTATGGTGTGGG+GGG | + | chr2.4:18449498-18449517 | MS.gene059820:CDS | 50.0% | |
| GTGTGGGGGGTAAAGACTTA+AGG | + | chr2.4:18449511-18449530 | MS.gene059820:CDS | 50.0% | |
| TCCGACAGCATACAAAGGGA+AGG | - | chr2.4:18450543-18450562 | None:intergenic | 50.0% | |
| TCCTTGGATGGGACTCATGT+TGG | + | chr2.4:18449336-18449355 | MS.gene059820:CDS | 50.0% | |
| ! | GTTGATAGGGGAAGGATGGT+GGG | + | chr2.4:18449254-18449273 | MS.gene059820:CDS | 50.0% |
| ! | TGTTGATAGGGGAAGGATGG+TGG | + | chr2.4:18449253-18449272 | MS.gene059820:CDS | 50.0% |
| !! | CCCATGACGGATCATGTTGT+TGG | - | chr2.4:18450634-18450653 | None:intergenic | 50.0% |
| !! | GCAAAGGTGCCTGAATCAGA+AGG | + | chr2.4:18451004-18451023 | MS.gene059820:CDS | 50.0% |
| GCGAAGAAGACATGGCTGAG+AGG | - | chr2.4:18449818-18449837 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 18448295 | 18451051 | 18448295 | ID=MS.gene059820 |
| chr2.4 | mRNA | 18448295 | 18451051 | 18448295 | ID=MS.gene059820.t1;Parent=MS.gene059820 |
| chr2.4 | exon | 18448295 | 18451051 | 18448295 | ID=MS.gene059820.t1.exon1;Parent=MS.gene059820.t1 |
| chr2.4 | CDS | 18448295 | 18451051 | 18448295 | ID=cds.MS.gene059820.t1;Parent=MS.gene059820.t1 |
| Gene Sequence |
| Protein sequence |
