Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052299.t1 | RHN61635.1 | 84.8 | 1360 | 206 | 1 | 1 | 1359 | 1 | 1360 | 4.60E-161 | 579.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052299.t1 | A0A396ID41 | 84.8 | 1360 | 206 | 1 | 1 | 1359 | 1 | 1360 | 3.3e-161 | 579.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79182 | MS.gene052299 | PPI |
| MS.gene057731 | MS.gene052299 | PPI |
| MS.gene040402 | MS.gene052299 | PPI |
| MS.gene052299 | MS.gene061924 | PPI |
| MS.gene003500 | MS.gene052299 | PPI |
| MS.gene22490 | MS.gene052299 | PPI |
| MS.gene45415 | MS.gene052299 | PPI |
| MS.gene029842 | MS.gene052299 | PPI |
| MS.gene24596 | MS.gene052299 | PPI |
| MS.gene018527 | MS.gene052299 | PPI |
| MS.gene052299 | MS.gene90953 | PPI |
| MS.gene09818 | MS.gene052299 | PPI |
| MS.gene74439 | MS.gene052299 | PPI |
| MS.gene052299 | MS.gene074085 | PPI |
| MS.gene62509 | MS.gene052299 | PPI |
| MS.gene52098 | MS.gene052299 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052299.t1 | MTR_4g076030 | 91.550 | 1361 | 74 | 4 | 1 | 1359 | 1 | 1322 | 0.0 | 2237 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052299.t1 | AT2G32240 | 47.729 | 1387 | 643 | 15 | 1 | 1359 | 1 | 1333 | 0.0 | 900 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 33.017 | 842 | 339 | 17 | 528 | 1359 | 164 | 790 | 1.71e-74 | 265 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.85e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 30.638 | 705 | 274 | 13 | 528 | 1225 | 164 | 660 | 4.46e-48 | 184 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.70e-11 | 67.8 |
| MS.gene052299.t1 | AT1G05320 | 30.638 | 705 | 274 | 13 | 528 | 1225 | 164 | 660 | 4.46e-48 | 184 |
| MS.gene052299.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 155 | 223 | 60 | 128 | 5.70e-11 | 67.8 |
Find 167 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCCTGCATCTTCTTTC+GGG | 0.114154 | 4.2:-33095998 | None:intergenic |
| CGTTAATGCAAAACACTTTA+AGG | 0.134026 | 4.2:+33096641 | MS.gene052299:CDS |
| CTCCAATTGTGAATTCTTCT+TGG | 0.153436 | 4.2:-33097144 | None:intergenic |
| GCTTGAGAAAATCAAGATTT+TGG | 0.154559 | 4.2:+33097889 | MS.gene052299:CDS |
| GACATTGTCAAGATGTTTAT+TGG | 0.168100 | 4.2:-33097405 | None:intergenic |
| TGACTGTAAATCACTCAATT+TGG | 0.218237 | 4.2:-33098566 | None:intergenic |
| ACCTTTGTCACTGGAACTTC+TGG | 0.227157 | 4.2:-33094987 | None:intergenic |
| GCAATTCCTGCATCTTCTTT+CGG | 0.233038 | 4.2:-33095999 | None:intergenic |
| TAAATTTCTCTATAGCTTCT+TGG | 0.258045 | 4.2:-33097838 | None:intergenic |
| GTTCTTCTAGAGAATTCTTC+AGG | 0.272845 | 4.2:-33099559 | None:intergenic |
| AACTTCCAATAGCTGTGTTT+TGG | 0.291414 | 4.2:-33096301 | None:intergenic |
| TAGCTCTATTTCACTTTCAT+TGG | 0.293235 | 4.2:-33097498 | None:intergenic |
| CTCCTGAAGTTCATCAATCT+TGG | 0.299260 | 4.2:-33098104 | None:intergenic |
| AGGAGCAGAATCTCAGAAAT+TGG | 0.301176 | 4.2:+33099523 | MS.gene052299:CDS |
| TCGGCTGCGCTCATTGTTCA+TGG | 0.309471 | 4.2:-33097219 | None:intergenic |
| ATTATCTTCGGCATCATTCT+TGG | 0.315954 | 4.2:+33100013 | MS.gene052299:CDS |
| CTGTTCAAGCTCTGAATTGT+TGG | 0.317550 | 4.2:-33096748 | None:intergenic |
| GGAGTTGTGTAGTGATTTAG+AGG | 0.324329 | 4.2:+33096662 | MS.gene052299:CDS |
| TGAACAGAAGGTGAAGTCTT+TGG | 0.324411 | 4.2:+33096764 | MS.gene052299:CDS |
| AGCTTCTTGGAGCTTCTGTT+TGG | 0.354326 | 4.2:-33097825 | None:intergenic |
| AACCAAGATTGATGAACTTC+AGG | 0.355735 | 4.2:+33098102 | MS.gene052299:CDS |
| TTCATTGGCAGAATGAGTTT+TGG | 0.360294 | 4.2:-33098227 | None:intergenic |
| AAAGAGAAATTAGAAGAAAC+TGG | 0.365005 | 4.2:+33095790 | MS.gene052299:CDS |
| TTCAAGGATGTGAGCTTCAT+TGG | 0.365854 | 4.2:-33098242 | None:intergenic |
| CTGATTTGGAATGAGAGCTC+TGG | 0.372452 | 4.2:-33097259 | None:intergenic |
| TTTGCAGGTCGGAAGTGTTC+AGG | 0.377824 | 4.2:+33099215 | MS.gene052299:intron |
| CATCCCTCACAATTTCCAAT+AGG | 0.377955 | 4.2:-33097610 | None:intergenic |
| ACTCTCCAAAACACAGCTAT+TGG | 0.381076 | 4.2:+33096296 | MS.gene052299:CDS |
| TTGAAGCACAAGAGAAGGTT+CGG | 0.381149 | 4.2:+33095677 | MS.gene052299:CDS |
| TGAAGAGAGTTTGAGCAAAC+TGG | 0.383772 | 4.2:+33097964 | MS.gene052299:CDS |
| AACAGAGAAATACAGAATTC+AGG | 0.386994 | 4.2:+33097325 | MS.gene052299:CDS |
| ATGAATTTCAAGTTCATCCT+TGG | 0.388092 | 4.2:+33099974 | MS.gene052299:CDS |
| TCTTCTTAATAGCCTATTGC+AGG | 0.390574 | 4.2:+33097073 | MS.gene052299:CDS |
| GCTCCTTCAACTTCTCTTCA+AGG | 0.391948 | 4.2:-33098935 | None:intergenic |
| TATCCATGTGCTCCTGCAAT+AGG | 0.401274 | 4.2:-33097085 | None:intergenic |
| TGCTGATAAGAAAGATGCTT+TGG | 0.407101 | 4.2:+33099817 | MS.gene052299:CDS |
| AGATTCAGCTTTCGCGAGTT+GGG | 0.413057 | 4.2:-33099057 | None:intergenic |
| TTGAAGGAGCATCAGAGAAA+TGG | 0.413137 | 4.2:+33098948 | MS.gene052299:CDS |
| TCTGAGAATGAATTACTTGT+CGG | 0.416209 | 4.2:+33098061 | MS.gene052299:CDS |
| TTCTCTGAAGGAAGAATTGA+AGG | 0.417486 | 4.2:+33096182 | MS.gene052299:CDS |
| TGCTGAGTCAGAAAACCTAT+TGG | 0.417564 | 4.2:+33097595 | MS.gene052299:CDS |
| CTTTCGCAGGTTTAGTTCCT+CGG | 0.421058 | 4.2:-33096367 | None:intergenic |
| ATCCAAGAAGAATTCACAAT+TGG | 0.425360 | 4.2:+33097142 | MS.gene052299:CDS |
| GATAAAGATTTATGAAGAAC+AGG | 0.425494 | 4.2:+33098360 | MS.gene052299:CDS |
| TAGATTCAGCTTTCGCGAGT+TGG | 0.427997 | 4.2:-33099058 | None:intergenic |
| TAAGCAGAAAGAGCTTCTTC+AGG | 0.430704 | 4.2:+33095933 | MS.gene052299:CDS |
| GGATCAAATCTTCTAGTTCT+CGG | 0.433255 | 4.2:-33097238 | None:intergenic |
| CACGTCTCTCTCAGCATCAT+TGG | 0.434485 | 4.2:-33096985 | None:intergenic |
| CTTCAGGTGAAGGAAGCGTT+TGG | 0.438245 | 4.2:+33095949 | MS.gene052299:CDS |
| CGAAGTTACATTGAAGAGTC+AGG | 0.445795 | 4.2:+33096533 | MS.gene052299:CDS |
| TGACCTTGAAGAGAAGTTGA+AGG | 0.447342 | 4.2:+33098932 | MS.gene052299:CDS |
| TTGAAGAAAATCTTGCTGTA+AGG | 0.447582 | 4.2:+33097729 | MS.gene052299:CDS |
| CAAAGAAGTCTTGAGCTTGA+AGG | 0.448234 | 4.2:+33096831 | MS.gene052299:CDS |
| TTATCTTCGGCATCATTCTT+GGG | 0.450792 | 4.2:+33100014 | MS.gene052299:CDS |
| GAAGATCTTCATAGTGAATC+CGG | 0.460121 | 4.2:+33096786 | MS.gene052299:CDS |
| ATGAACTTGAAATTCATGAT+AGG | 0.461531 | 4.2:-33099968 | None:intergenic |
| ATGCTTTGTCACCAAGTCTT+CGG | 0.464198 | 4.2:-33098656 | None:intergenic |
| TGCTGAAGGAGTTGTCGCTT+CGG | 0.467033 | 4.2:-33099900 | None:intergenic |
| GCGAAAATGAAGATTTGAAA+AGG | 0.468273 | 4.2:+33097999 | MS.gene052299:CDS |
| AGCAGTAGCTGCAACGGCTC+CGG | 0.468620 | 4.2:-33096805 | None:intergenic |
| GAGGAAAATATCACAGGAGC+CGG | 0.468773 | 4.2:+33097911 | MS.gene052299:CDS |
| GCTCTTGTATCGATTATCTT+CGG | 0.469158 | 4.2:+33100001 | MS.gene052299:CDS |
| GATTTATTGCAGGAAACAAA+TGG | 0.471001 | 4.2:+33095502 | MS.gene052299:intron |
| TGTCACTGGAACTTCTGGAA+TGG | 0.476798 | 4.2:-33094982 | None:intergenic |
| CAAGAAGAATTCACAATTGG+AGG | 0.477966 | 4.2:+33097145 | MS.gene052299:CDS |
| GACCTTTGCACTTTCCAACT+CGG | 0.479242 | 4.2:-33096475 | None:intergenic |
| TTTGCTTCAGATATTTCCTT+AGG | 0.482910 | 4.2:-33095535 | None:intergenic |
| TCTTCGACAACCTTTGTCAC+TGG | 0.486601 | 4.2:-33094996 | None:intergenic |
| AGTGAAATAAATGCGCTGAA+TGG | 0.492595 | 4.2:+33099300 | MS.gene052299:CDS |
| TTCTTCTAGAGAATTCTTCA+GGG | 0.493169 | 4.2:-33099558 | None:intergenic |
| TGAAGAAAATCTTGCTGTAA+GGG | 0.499819 | 4.2:+33097730 | MS.gene052299:CDS |
| AAAGAATGCTGCCGAAGACT+TGG | 0.501472 | 4.2:+33098645 | MS.gene052299:CDS |
| TACAAATGCAGCTGCAGAAG+AGG | 0.503485 | 4.2:+33096866 | MS.gene052299:CDS |
| CGCTAAATTGAAAGAGGCTG+AGG | 0.504259 | 4.2:+33097040 | MS.gene052299:CDS |
| ACATGAAAATTCTCAGCTGA+AGG | 0.509281 | 4.2:+33095750 | MS.gene052299:CDS |
| CTCTGCTGCACTTGTCGAGA+AGG | 0.509330 | 4.2:+33098594 | MS.gene052299:CDS |
| TGCATTGCAAAGTAAGCTGC+AGG | 0.509362 | 4.2:+33099025 | MS.gene052299:CDS |
| TGAAGCACAAGAGAAGGTTC+GGG | 0.511701 | 4.2:+33095678 | MS.gene052299:CDS |
| ATCTCAGAAATTGGAACTAG+AGG | 0.515507 | 4.2:+33099532 | MS.gene052299:CDS |
| GCTTCAAGAAATTCTCTGCT+AGG | 0.515876 | 4.2:-33095661 | None:intergenic |
| CCTTGAAAATACACTGCAAA+CGG | 0.519186 | 4.2:+33097475 | MS.gene052299:CDS |
| TAAGATTGCTGAAAATCAAA+AGG | 0.520332 | 4.2:+33096215 | MS.gene052299:CDS |
| AGAACTTTCTTCTATTCAAG+AGG | 0.522310 | 4.2:+33096266 | MS.gene052299:CDS |
| GCATCTCATCTCCATCGAAA+AGG | 0.522651 | 4.2:+33099861 | MS.gene052299:CDS |
| CGAGAAGGAAGAGAATGTGT+TGG | 0.526731 | 4.2:+33095603 | MS.gene052299:CDS |
| AGGAAAATATCACAGGAGCC+GGG | 0.526732 | 4.2:+33097912 | MS.gene052299:CDS |
| TGAGAAGCTGAGTACCTTGG+AGG | 0.531485 | 4.2:+33098333 | MS.gene052299:CDS |
| ATTTCTTGAAGCACAAGAGA+AGG | 0.531871 | 4.2:+33095672 | MS.gene052299:CDS |
| TGAAACTCGTAAAGCTGAGC+TGG | 0.536096 | 4.2:+33098405 | MS.gene052299:CDS |
| CAATTCAGAGCTTGAACAGA+AGG | 0.537146 | 4.2:+33096752 | MS.gene052299:CDS |
| AGAAGAGGCACGGAAGTTCG+AGG | 0.538325 | 4.2:+33096044 | MS.gene052299:CDS |
| AATTCATGATAGGCGAATCA+TGG | 0.539013 | 4.2:-33099958 | None:intergenic |
| AAATGGAGACTTGCTGCCTA+AGG | 0.539681 | 4.2:+33095519 | MS.gene052299:CDS |
| CGAAAAGAGAGTGAGTGAGT+TGG | 0.546118 | 4.2:+33097289 | MS.gene052299:CDS |
| AGATGAGATGGCTTCTCTGA+AGG | 0.546613 | 4.2:+33096170 | MS.gene052299:CDS |
| TCTCGACGCTAAATTGAAAG+AGG | 0.548418 | 4.2:+33097034 | MS.gene052299:CDS |
| AAAAGAGTTACAACTTGCAC+AGG | 0.549245 | 4.2:+33099341 | MS.gene052299:CDS |
| GGTGGCTCGATCTTCATGCT+CGG | 0.550471 | 4.2:-33097198 | None:intergenic |
| ACTAAACCTGCGAAAGACTT+CGG | 0.550834 | 4.2:+33096374 | MS.gene052299:CDS |
| TAGCCTATTGCAGGAGCACA+TGG | 0.556000 | 4.2:+33097082 | MS.gene052299:CDS |
| GACTAATCAGAATCTAAAGA+AGG | 0.556190 | 4.2:+33098890 | MS.gene052299:CDS |
| TCCGAGACTCATATTCAAGC+TGG | 0.558212 | 4.2:+33099935 | MS.gene052299:CDS |
| GTGTTTCCGAAGTCTTTCGC+AGG | 0.559992 | 4.2:-33096380 | None:intergenic |
| TGGAGACTCTTTGAAATCTG+AGG | 0.560075 | 4.2:+33098968 | MS.gene052299:CDS |
| AGAATCTTTAAATGCTGTGA+CGG | 0.560483 | 4.2:+33097523 | MS.gene052299:CDS |
| TGCTGAATCTGAGGGAAACA+AGG | 0.561032 | 4.2:+33096092 | MS.gene052299:CDS |
| GAAAGAGCTTCTTCAGGTGA+AGG | 0.561755 | 4.2:+33095939 | MS.gene052299:CDS |
| GAGGAAGATAATGCATCAGA+TGG | 0.561989 | 4.2:+33095565 | MS.gene052299:CDS |
| TGGTTCACATGCTGAATCTG+AGG | 0.565365 | 4.2:+33096083 | MS.gene052299:CDS |
| GCAGCTCAGCACTCTTGAAG+AGG | 0.568901 | 4.2:+33095891 | MS.gene052299:CDS |
| AGAAACTGCTGAAATAAATG+AGG | 0.572390 | 4.2:+33098504 | MS.gene052299:CDS |
| TCCAGAAGTTCCAGTGACAA+AGG | 0.573505 | 4.2:+33094986 | MS.gene052299:CDS |
| TTCCGAGTTGGAAAGTGCAA+AGG | 0.574527 | 4.2:+33096473 | MS.gene052299:CDS |
| GCCAGCTTGAATATGAGTCT+CGG | 0.575984 | 4.2:-33099936 | None:intergenic |
| AAACTTATTTGTCTCTACAA+AGG | 0.576365 | 4.2:+33096431 | MS.gene052299:CDS |
| TGAATCTAGACTACATGAAG+AGG | 0.577959 | 4.2:+33099073 | MS.gene052299:CDS |
| TTGACTAGCAGTAGCTGCAA+CGG | 0.578101 | 4.2:-33096811 | None:intergenic |
| CTCAAGCAGAGATTGAACCT+CGG | 0.581983 | 4.2:-33097873 | None:intergenic |
| AGTGCAGACATTGAAGTCAC+AGG | 0.585831 | 4.2:+33098687 | MS.gene052299:CDS |
| GAATGAGAAGCTGAGTACCT+TGG | 0.585914 | 4.2:+33098330 | MS.gene052299:CDS |
| GAACAGTGTTCTGTCAGAGA+AGG | 0.586451 | 4.2:+33098132 | MS.gene052299:CDS |
| ATTTAACAGCAAAGATTCCG+AGG | 0.588853 | 4.2:+33097856 | MS.gene052299:CDS |
| AAAACCTATTGGAAATTGTG+AGG | 0.589441 | 4.2:+33097606 | MS.gene052299:CDS |
| CATGAAAATTCTCAGCTGAA+GGG | 0.590489 | 4.2:+33095751 | MS.gene052299:CDS |
| GGAAAATATCACAGGAGCCG+GGG | 0.594132 | 4.2:+33097913 | MS.gene052299:CDS |
| ACTCAATTTGGATTCATAGA+CGG | 0.597065 | 4.2:-33098554 | None:intergenic |
| GAAGAATTCACAATTGGAGG+AGG | 0.597266 | 4.2:+33097148 | MS.gene052299:CDS |
| AATGATGTTGCAGGGTGAGG+AGG | 0.597607 | 4.2:+33099793 | MS.gene052299:intron |
| AGAATTCATTAAAGTCGAGA+AGG | 0.598167 | 4.2:+33095588 | MS.gene052299:CDS |
| AAACCTATTGGAAATTGTGA+GGG | 0.599739 | 4.2:+33097607 | MS.gene052299:CDS |
| GAAAAGCATGGAAGATGAGA+TGG | 0.600212 | 4.2:+33096158 | MS.gene052299:CDS |
| GCTGCAACTTTCTACAGAAG+AGG | 0.602865 | 4.2:+33096029 | MS.gene052299:CDS |
| GCATCTTGAAGCAGTAGTTG+AGG | 0.603475 | 4.2:+33098450 | MS.gene052299:CDS |
| TGATGAGAAAATCTCAGTGA+AGG | 0.604335 | 4.2:+33099655 | MS.gene052299:CDS |
| GACAAAGGTTGTCGAAGAGG+TGG | 0.604844 | 4.2:+33095001 | MS.gene052299:CDS |
| AAGCTCCCGAAAGAAGATGC+AGG | 0.607019 | 4.2:+33095993 | MS.gene052299:CDS |
| ATATAGAGCTTACTTCTGCA+AGG | 0.608300 | 4.2:+33097759 | MS.gene052299:CDS |
| AATCTTTATCTGTCCCTCCA+AGG | 0.608557 | 4.2:-33098347 | None:intergenic |
| GGATGATTTAAATCTTACAC+AGG | 0.610338 | 4.2:+33097628 | MS.gene052299:CDS |
| TCAGAAAGATGAAAGCATCA+AGG | 0.614358 | 4.2:+33095025 | MS.gene052299:CDS |
| ATGATGTTGCAGGGTGAGGA+GGG | 0.615465 | 4.2:+33099794 | MS.gene052299:intron |
| GATGAAGAAGTTGATGCTGA+AGG | 0.615729 | 4.2:-33099914 | None:intergenic |
| ATTAACGGTTAGATCTTCAA+CGG | 0.617286 | 4.2:-33096625 | None:intergenic |
| AGTGACAAAGGTTGTCGAAG+AGG | 0.618117 | 4.2:+33094998 | MS.gene052299:CDS |
| GGTTCACATGCTGAATCTGA+GGG | 0.619554 | 4.2:+33096084 | MS.gene052299:CDS |
| AGAATTTGAGAGACTACTTG+AGG | 0.621434 | 4.2:+33096119 | MS.gene052299:CDS |
| AACTCGTAAAGCTGAGCTGG+AGG | 0.624381 | 4.2:+33098408 | MS.gene052299:CDS |
| GAAATTGAGTGCGAAAAGCA+TGG | 0.624539 | 4.2:+33096146 | MS.gene052299:CDS |
| GAAGAAAATCTTGCTGTAAG+GGG | 0.624970 | 4.2:+33097731 | MS.gene052299:CDS |
| AGCGGCAGAGCAAAAGAATG+TGG | 0.626530 | 4.2:+33096926 | MS.gene052299:CDS |
| ATTGCAGAAGCATACTGAGA+AGG | 0.631122 | 4.2:+33098288 | MS.gene052299:CDS |
| GAGAAGCTGAGTACCTTGGA+GGG | 0.631334 | 4.2:+33098334 | MS.gene052299:CDS |
| AAAGGTCAAGCTGCAAGATG+AGG | 0.631519 | 4.2:+33096491 | MS.gene052299:CDS |
| AGAGAAGGTTCGGGAACTCG+AGG | 0.633128 | 4.2:+33095687 | MS.gene052299:CDS |
| CAAAGATATAGACTGTTCCC+CGG | 0.633474 | 4.2:-33097930 | None:intergenic |
| ACAGGATACTATAGCGAACA+AGG | 0.636527 | 4.2:+33099359 | MS.gene052299:CDS |
| AACTTTCTACAGAAGAGGCA+CGG | 0.647127 | 4.2:+33096034 | MS.gene052299:CDS |
| TCGATACAAGAGCTACTCCA+AGG | 0.657381 | 4.2:-33099991 | None:intergenic |
| AAATGCGCTGAATGGAAAGG+TGG | 0.664867 | 4.2:+33099308 | MS.gene052299:CDS |
| GCTGCGCTCATTGTTCATGG+TGG | 0.678043 | 4.2:-33097216 | None:intergenic |
| TCTCTGAAGGAAGAATTGAA+GGG | 0.679949 | 4.2:+33096183 | MS.gene052299:CDS |
| GAGGAGCTGCATAAGCAAAG+TGG | 0.685020 | 4.2:+33096063 | MS.gene052299:CDS |
| AATAAATGCGCTGAATGGAA+AGG | 0.688652 | 4.2:+33099305 | MS.gene052299:CDS |
| ATCTGAAGCAAAGAAAGACG+AGG | 0.694382 | 4.2:+33095546 | MS.gene052299:CDS |
| TCTAGTAGACGAGTTGACCG+AGG | 0.705814 | 4.2:+33096350 | MS.gene052299:CDS |
| GCTTGAAACACGCTTCATAG+CGG | 0.723520 | 4.2:+33096908 | MS.gene052299:CDS |
| TGAATCTGAGGGAAACAAGG+CGG | 0.749133 | 4.2:+33096095 | MS.gene052299:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAATTAAGATTTGAA+AGG | - | chr4.2:33099154-33099173 | None:intergenic | 15.0% |
| !! | AAATAGAAATAGAAGAAGAA+AGG | - | chr4.2:33098740-33098759 | None:intergenic | 20.0% |
| !! | TTCTTAAAAAAAAAGCAGAA+AGG | + | chr4.2:33099503-33099522 | MS.gene052299:intron | 20.0% |
| !!! | ATTGTTTTATGATTTATTGC+AGG | + | chr4.2:33095492-33095511 | MS.gene052299:intron | 20.0% |
| !!! | TGATCATTTTGTATAAACTA+TGG | + | chr4.2:33098781-33098800 | MS.gene052299:intron | 20.0% |
| ! | AAACTTATTTGTCTCTACAA+AGG | + | chr4.2:33096431-33096450 | MS.gene052299:CDS | 25.0% |
| ! | AAAGAGAAATTAGAAGAAAC+TGG | + | chr4.2:33095790-33095809 | MS.gene052299:CDS | 25.0% |
| ! | ACATAAAGTCATTAAGCATA+AGG | + | chr4.2:33095458-33095477 | MS.gene052299:intron | 25.0% |
| ! | ATGAACTTGAAATTCATGAT+AGG | - | chr4.2:33099971-33099990 | None:intergenic | 25.0% |
| ! | GAAGAAGAAAGGAAAAATAA+AGG | - | chr4.2:33098729-33098748 | None:intergenic | 25.0% |
| ! | GATAAAGATTTATGAAGAAC+AGG | + | chr4.2:33098360-33098379 | MS.gene052299:CDS | 25.0% |
| ! | GATAACATTTCATTGAGATT+TGG | - | chr4.2:33098823-33098842 | None:intergenic | 25.0% |
| ! | TAAATTTCTCTATAGCTTCT+TGG | - | chr4.2:33097841-33097860 | None:intergenic | 25.0% |
| ! | TAAGATTGCTGAAAATCAAA+AGG | + | chr4.2:33096215-33096234 | MS.gene052299:CDS | 25.0% |
| ! | TATATAGTTGTTTATCGCTT+AGG | + | chr4.2:33095387-33095406 | MS.gene052299:intron | 25.0% |
| ! | TTAATGACTTTATGTTCAAG+TGG | - | chr4.2:33095453-33095472 | None:intergenic | 25.0% |
| !! | TAATTTATACTTGTTAGCGT+AGG | + | chr4.2:33099711-33099730 | MS.gene052299:intron | 25.0% |
| !! | TTAATGATTGCGTAAGTTTT+TGG | + | chr4.2:33095170-33095189 | MS.gene052299:intron | 25.0% |
| !!! | CTTAAAGTGTTTTGCATTAA+CGG | - | chr4.2:33096643-33096662 | None:intergenic | 25.0% |
| !!! | GCAATTTTGATTCTATTTCA+AGG | - | chr4.2:33098261-33098280 | None:intergenic | 25.0% |
| AAAACCTATTGGAAATTGTG+AGG | + | chr4.2:33097606-33097625 | MS.gene052299:CDS | 30.0% | |
| AAACCTATTGGAAATTGTGA+GGG | + | chr4.2:33097607-33097626 | MS.gene052299:CDS | 30.0% | |
| AACAGAGAAATACAGAATTC+AGG | + | chr4.2:33097325-33097344 | MS.gene052299:CDS | 30.0% | |
| AAGCTTAATGCAGAGAAAAA+AGG | + | chr4.2:33096591-33096610 | MS.gene052299:CDS | 30.0% | |
| ACTCAATTTGGATTCATAGA+CGG | - | chr4.2:33098557-33098576 | None:intergenic | 30.0% | |
| AGAAACTGCTGAAATAAATG+AGG | + | chr4.2:33098504-33098523 | MS.gene052299:CDS | 30.0% | |
| AGAACTTTCTTCTATTCAAG+AGG | + | chr4.2:33096266-33096285 | MS.gene052299:CDS | 30.0% | |
| AGAATCTTTAAATGCTGTGA+CGG | + | chr4.2:33097523-33097542 | MS.gene052299:CDS | 30.0% | |
| AGAATTCATTAAAGTCGAGA+AGG | + | chr4.2:33095588-33095607 | MS.gene052299:CDS | 30.0% | |
| AGAGGAAAAACTAAAGCTTT+CGG | + | chr4.2:33096680-33096699 | MS.gene052299:CDS | 30.0% | |
| ATCCAAGAAGAATTCACAAT+TGG | + | chr4.2:33097142-33097161 | MS.gene052299:CDS | 30.0% | |
| ATTAACGGTTAGATCTTCAA+CGG | - | chr4.2:33096628-33096647 | None:intergenic | 30.0% | |
| CGTTAATGCAAAACACTTTA+AGG | + | chr4.2:33096641-33096660 | MS.gene052299:CDS | 30.0% | |
| CTTCATTTCTGTCCTATAAA+CGG | - | chr4.2:33095259-33095278 | None:intergenic | 30.0% | |
| GACATTGTCAAGATGTTTAT+TGG | - | chr4.2:33097408-33097427 | None:intergenic | 30.0% | |
| GACTAATCAGAATCTAAAGA+AGG | + | chr4.2:33098890-33098909 | MS.gene052299:CDS | 30.0% | |
| GATTTATTGCAGGAAACAAA+TGG | + | chr4.2:33095502-33095521 | MS.gene052299:intron | 30.0% | |
| GCGAAAATGAAGATTTGAAA+AGG | + | chr4.2:33097999-33098018 | MS.gene052299:CDS | 30.0% | |
| GGATGATTTAAATCTTACAC+AGG | + | chr4.2:33097628-33097647 | MS.gene052299:CDS | 30.0% | |
| TCTGAGAATGAATTACTTGT+CGG | + | chr4.2:33098061-33098080 | MS.gene052299:CDS | 30.0% | |
| TGACTGTAAATCACTCAATT+TGG | - | chr4.2:33098569-33098588 | None:intergenic | 30.0% | |
| TTACAAAAATAGCCGAGATT+TGG | - | chr4.2:33099688-33099707 | None:intergenic | 30.0% | |
| TTTGCTTCAGATATTTCCTT+AGG | - | chr4.2:33095538-33095557 | None:intergenic | 30.0% | |
| ! | AACAGATTCTCTTTTATCTC+AGG | + | chr4.2:33096719-33096738 | MS.gene052299:CDS | 30.0% |
| ! | CATTTTCTAATGATGTTGCA+GGG | + | chr4.2:33099785-33099804 | MS.gene052299:intron | 30.0% |
| ! | GCTTGAGAAAATCAAGATTT+TGG | + | chr4.2:33097889-33097908 | MS.gene052299:CDS | 30.0% |
| ! | GGAAAAATTGAAACTTGTTC+AGG | + | chr4.2:33098525-33098544 | MS.gene052299:CDS | 30.0% |
| ! | TACAGCAAGATTTTCTTCAA+TGG | - | chr4.2:33097729-33097748 | None:intergenic | 30.0% |
| ! | TAGCTCTATTTCACTTTCAT+TGG | - | chr4.2:33097501-33097520 | None:intergenic | 30.0% |
| ! | TGAAGAAAATCTTGCTGTAA+GGG | + | chr4.2:33097730-33097749 | MS.gene052299:CDS | 30.0% |
| ! | TGAGAAAATCAAGATTTTGG+AGG | + | chr4.2:33097892-33097911 | MS.gene052299:CDS | 30.0% |
| ! | TGATTAATCTGATGTTTTGC+AGG | + | chr4.2:33099200-33099219 | MS.gene052299:intron | 30.0% |
| ! | TTCTTCTAGAGAATTCTTCA+GGG | - | chr4.2:33099561-33099580 | None:intergenic | 30.0% |
| ! | TTGAAGAAAATCTTGCTGTA+AGG | + | chr4.2:33097729-33097748 | MS.gene052299:CDS | 30.0% |
| !! | ATGAATTTCAAGTTCATCCT+TGG | + | chr4.2:33099974-33099993 | MS.gene052299:CDS | 30.0% |
| !! | ATTTTGGAGGAAAATATCAC+AGG | + | chr4.2:33097905-33097924 | MS.gene052299:CDS | 30.0% |
| !!! | CTGCAGATTGTATTTTTTCT+CGG | - | chr4.2:33095875-33095894 | None:intergenic | 30.0% |
| !!! | GCACTTGTTTTACAAAACAT+AGG | - | chr4.2:33099113-33099132 | None:intergenic | 30.0% |
| AAAAGAGTTACAACTTGCAC+AGG | + | chr4.2:33099341-33099360 | MS.gene052299:CDS | 35.0% | |
| AACCAAGATTGATGAACTTC+AGG | + | chr4.2:33098102-33098121 | MS.gene052299:CDS | 35.0% | |
| AATAAATGCGCTGAATGGAA+AGG | + | chr4.2:33099305-33099324 | MS.gene052299:CDS | 35.0% | |
| AATTCATGATAGGCGAATCA+TGG | - | chr4.2:33099961-33099980 | None:intergenic | 35.0% | |
| ACAAGAAAAAGTTTCCGAGT+TGG | + | chr4.2:33096461-33096480 | MS.gene052299:CDS | 35.0% | |
| ACATGAAAATTCTCAGCTGA+AGG | + | chr4.2:33095750-33095769 | MS.gene052299:CDS | 35.0% | |
| AGAATTTGAGAGACTACTTG+AGG | + | chr4.2:33096119-33096138 | MS.gene052299:CDS | 35.0% | |
| AGTGAAATAAATGCGCTGAA+TGG | + | chr4.2:33099300-33099319 | MS.gene052299:CDS | 35.0% | |
| ATATAGAGCTTACTTCTGCA+AGG | + | chr4.2:33097759-33097778 | MS.gene052299:CDS | 35.0% | |
| ATCTCAGAAATTGGAACTAG+AGG | + | chr4.2:33099532-33099551 | MS.gene052299:CDS | 35.0% | |
| ATTATCTTCGGCATCATTCT+TGG | + | chr4.2:33100013-33100032 | MS.gene052299:CDS | 35.0% | |
| ATTTAACAGCAAAGATTCCG+AGG | + | chr4.2:33097856-33097875 | MS.gene052299:CDS | 35.0% | |
| ATTTCTTGAAGCACAAGAGA+AGG | + | chr4.2:33095672-33095691 | MS.gene052299:CDS | 35.0% | |
| CAAGAAGAATTCACAATTGG+AGG | + | chr4.2:33097145-33097164 | MS.gene052299:CDS | 35.0% | |
| CATGAAAATTCTCAGCTGAA+GGG | + | chr4.2:33095751-33095770 | MS.gene052299:CDS | 35.0% | |
| CCTTGAAAATACACTGCAAA+CGG | + | chr4.2:33097475-33097494 | MS.gene052299:CDS | 35.0% | |
| CGTTTATAGGACAGAAATGA+AGG | + | chr4.2:33095257-33095276 | MS.gene052299:intron | 35.0% | |
| CTCCAATTGTGAATTCTTCT+TGG | - | chr4.2:33097147-33097166 | None:intergenic | 35.0% | |
| GAAGATCTTCATAGTGAATC+CGG | + | chr4.2:33096786-33096805 | MS.gene052299:CDS | 35.0% | |
| GAAGGTAACTATCCAAATCT+CGG | + | chr4.2:33099673-33099692 | MS.gene052299:intron | 35.0% | |
| TCTTCTTAATAGCCTATTGC+AGG | + | chr4.2:33097073-33097092 | MS.gene052299:CDS | 35.0% | |
| TGAATCTAGACTACATGAAG+AGG | + | chr4.2:33099073-33099092 | MS.gene052299:CDS | 35.0% | |
| TGATGAGAAAATCTCAGTGA+AGG | + | chr4.2:33099655-33099674 | MS.gene052299:CDS | 35.0% | |
| TGCTGATAAGAAAGATGCTT+TGG | + | chr4.2:33099817-33099836 | MS.gene052299:CDS | 35.0% | |
| TTATCTTCGGCATCATTCTT+GGG | + | chr4.2:33100014-33100033 | MS.gene052299:CDS | 35.0% | |
| ! | AACTTCCAATAGCTGTGTTT+TGG | - | chr4.2:33096304-33096323 | None:intergenic | 35.0% |
| ! | CTGAGAATTTTCATGTTCAG+AGG | - | chr4.2:33095746-33095765 | None:intergenic | 35.0% |
| ! | CTTTTCGGTACTTTCTGATT+TGG | - | chr4.2:33097276-33097295 | None:intergenic | 35.0% |
| ! | GAAGAAAATCTTGCTGTAAG+GGG | + | chr4.2:33097731-33097750 | MS.gene052299:CDS | 35.0% |
| ! | GCATTTTCTAATGATGTTGC+AGG | + | chr4.2:33099784-33099803 | MS.gene052299:intron | 35.0% |
| ! | GTCGAGATGAGATATTTTCT+CGG | - | chr4.2:33097021-33097040 | None:intergenic | 35.0% |
| ! | GTTCTTCTAGAGAATTCTTC+AGG | - | chr4.2:33099562-33099581 | None:intergenic | 35.0% |
| ! | TAATCTGATGTTTTGCAGGT+CGG | + | chr4.2:33099204-33099223 | MS.gene052299:intron | 35.0% |
| ! | TCTCTGAAGGAAGAATTGAA+GGG | + | chr4.2:33096183-33096202 | MS.gene052299:CDS | 35.0% |
| ! | TGAGCTTCTTTCTGTTTTGT+GGG | - | chr4.2:33095638-33095657 | None:intergenic | 35.0% |
| ! | TTCATTGGCAGAATGAGTTT+TGG | - | chr4.2:33098230-33098249 | None:intergenic | 35.0% |
| ! | TTCTCTGAAGGAAGAATTGA+AGG | + | chr4.2:33096182-33096201 | MS.gene052299:CDS | 35.0% |
| !! | GCTCTTGTATCGATTATCTT+CGG | + | chr4.2:33100001-33100020 | MS.gene052299:CDS | 35.0% |
| !! | GGATCAAATCTTCTAGTTCT+CGG | - | chr4.2:33097241-33097260 | None:intergenic | 35.0% |
| !! | TCAGAAAGATGAAAGCATCA+AGG | + | chr4.2:33095025-33095044 | MS.gene052299:CDS | 35.0% |
| AACTTTCTACAGAAGAGGCA+CGG | + | chr4.2:33096034-33096053 | MS.gene052299:CDS | 40.0% | |
| AATCTTTATCTGTCCCTCCA+AGG | - | chr4.2:33098350-33098369 | None:intergenic | 40.0% | |
| ACAGGATACTATAGCGAACA+AGG | + | chr4.2:33099359-33099378 | MS.gene052299:CDS | 40.0% | |
| ACTAAACCTGCGAAAGACTT+CGG | + | chr4.2:33096374-33096393 | MS.gene052299:CDS | 40.0% | |
| ACTCTCCAAAACACAGCTAT+TGG | + | chr4.2:33096296-33096315 | MS.gene052299:CDS | 40.0% | |
| AGGAGCAGAATCTCAGAAAT+TGG | + | chr4.2:33099523-33099542 | MS.gene052299:CDS | 40.0% | |
| ATGCTTTGTCACCAAGTCTT+CGG | - | chr4.2:33098659-33098678 | None:intergenic | 40.0% | |
| CAAAGAAGTCTTGAGCTTGA+AGG | + | chr4.2:33096831-33096850 | MS.gene052299:CDS | 40.0% | |
| CAAAGATATAGACTGTTCCC+CGG | - | chr4.2:33097933-33097952 | None:intergenic | 40.0% | |
| CAATTCAGAGCTTGAACAGA+AGG | + | chr4.2:33096752-33096771 | MS.gene052299:CDS | 40.0% | |
| CAATTCCTGCATCTTCTTTC+GGG | - | chr4.2:33096001-33096020 | None:intergenic | 40.0% | |
| CATCCCTCACAATTTCCAAT+AGG | - | chr4.2:33097613-33097632 | None:intergenic | 40.0% | |
| CGAAGTTACATTGAAGAGTC+AGG | + | chr4.2:33096533-33096552 | MS.gene052299:CDS | 40.0% | |
| CTCCTGAAGTTCATCAATCT+TGG | - | chr4.2:33098107-33098126 | None:intergenic | 40.0% | |
| GAAATTGAGTGCGAAAAGCA+TGG | + | chr4.2:33096146-33096165 | MS.gene052299:CDS | 40.0% | |
| GAAGAATTCACAATTGGAGG+AGG | + | chr4.2:33097148-33097167 | MS.gene052299:CDS | 40.0% | |
| GAGGAAGATAATGCATCAGA+TGG | + | chr4.2:33095565-33095584 | MS.gene052299:CDS | 40.0% | |
| GCAATTCCTGCATCTTCTTT+CGG | - | chr4.2:33096002-33096021 | None:intergenic | 40.0% | |
| GCTTCAAGAAATTCTCTGCT+AGG | - | chr4.2:33095664-33095683 | None:intergenic | 40.0% | |
| GGAAAAACTAAAGCTTTCGG+AGG | + | chr4.2:33096683-33096702 | MS.gene052299:CDS | 40.0% | |
| GGAGTTGTGTAGTGATTTAG+AGG | + | chr4.2:33096662-33096681 | MS.gene052299:CDS | 40.0% | |
| GTTGAGTTTATGGACACTGA+AGG | - | chr4.2:33095227-33095246 | None:intergenic | 40.0% | |
| TAAGCAGAAAGAGCTTCTTC+AGG | + | chr4.2:33095933-33095952 | MS.gene052299:CDS | 40.0% | |
| TCAGCATACAAGAACAGCAT+TGG | - | chr4.2:33099429-33099448 | None:intergenic | 40.0% | |
| TCTCGACGCTAAATTGAAAG+AGG | + | chr4.2:33097034-33097053 | MS.gene052299:CDS | 40.0% | |
| TGAACAGAAGGTGAAGTCTT+TGG | + | chr4.2:33096764-33096783 | MS.gene052299:CDS | 40.0% | |
| TGAAGAGAGTTTGAGCAAAC+TGG | + | chr4.2:33097964-33097983 | MS.gene052299:CDS | 40.0% | |
| TGAAGGAGATGTCATTGTTC+TGG | + | chr4.2:33095274-33095293 | MS.gene052299:intron | 40.0% | |
| TGACCTTGAAGAGAAGTTGA+AGG | + | chr4.2:33098932-33098951 | MS.gene052299:CDS | 40.0% | |
| TGCAGAGAAAAAAGGACTTG+AGG | + | chr4.2:33096599-33096618 | MS.gene052299:CDS | 40.0% | |
| TGCTGAGTCAGAAAACCTAT+TGG | + | chr4.2:33097595-33097614 | MS.gene052299:CDS | 40.0% | |
| TTCAAGGATGTGAGCTTCAT+TGG | - | chr4.2:33098245-33098264 | None:intergenic | 40.0% | |
| TTCAAGTGGTGATCGACTAA+AGG | - | chr4.2:33095439-33095458 | None:intergenic | 40.0% | |
| TTGAAGCACAAGAGAAGGTT+CGG | + | chr4.2:33095677-33095696 | MS.gene052299:CDS | 40.0% | |
| ! | ATCTGAAGCAAAGAAAGACG+AGG | + | chr4.2:33095546-33095565 | MS.gene052299:CDS | 40.0% |
| ! | ATTGCAGAAGCATACTGAGA+AGG | + | chr4.2:33098288-33098307 | MS.gene052299:CDS | 40.0% |
| ! | CAACTCACTCACTCTCTTTT+CGG | - | chr4.2:33097291-33097310 | None:intergenic | 40.0% |
| ! | CCGTTTGCAGTGTATTTTCA+AGG | - | chr4.2:33097478-33097497 | None:intergenic | 40.0% |
| ! | CTGAGCTTCTTTCTGTTTTG+TGG | - | chr4.2:33095639-33095658 | None:intergenic | 40.0% |
| ! | GAAAAGCATGGAAGATGAGA+TGG | + | chr4.2:33096158-33096177 | MS.gene052299:CDS | 40.0% |
| ! | TTCTTGCTCTTCCTTTTCGA+TGG | - | chr4.2:33099875-33099894 | None:intergenic | 40.0% |
| !! | ATTGGCAGAATGAGTTTTGG+AGG | - | chr4.2:33098227-33098246 | None:intergenic | 40.0% |
| !! | CAGTGTATTTTCAAGGCTTG+AGG | - | chr4.2:33097471-33097490 | None:intergenic | 40.0% |
| !! | CTGTTCAAGCTCTGAATTGT+TGG | - | chr4.2:33096751-33096770 | None:intergenic | 40.0% |
| !! | GATGAAGAAGTTGATGCTGA+AGG | - | chr4.2:33099917-33099936 | None:intergenic | 40.0% |
| !! | TGGAGACTCTTTGAAATCTG+AGG | + | chr4.2:33098968-33098987 | MS.gene052299:CDS | 40.0% |
| AAAGAATGCTGCCGAAGACT+TGG | + | chr4.2:33098645-33098664 | MS.gene052299:CDS | 45.0% | |
| AAAGGTCAAGCTGCAAGATG+AGG | + | chr4.2:33096491-33096510 | MS.gene052299:CDS | 45.0% | |
| AAATGCGCTGAATGGAAAGG+TGG | + | chr4.2:33099308-33099327 | MS.gene052299:CDS | 45.0% | |
| ACCTTTGTCACTGGAACTTC+TGG | - | chr4.2:33094990-33095009 | None:intergenic | 45.0% | |
| AGATGAGATGGCTTCTCTGA+AGG | + | chr4.2:33096170-33096189 | MS.gene052299:CDS | 45.0% | |
| AGATTCAGCTTTCGCGAGTT+GGG | - | chr4.2:33099060-33099079 | None:intergenic | 45.0% | |
| AGCTTCTTGGAGCTTCTGTT+TGG | - | chr4.2:33097828-33097847 | None:intergenic | 45.0% | |
| AGGAAAATATCACAGGAGCC+GGG | + | chr4.2:33097912-33097931 | MS.gene052299:CDS | 45.0% | |
| AGTGACAAAGGTTGTCGAAG+AGG | + | chr4.2:33094998-33095017 | MS.gene052299:CDS | 45.0% | |
| AGTGCAGACATTGAAGTCAC+AGG | + | chr4.2:33098687-33098706 | MS.gene052299:CDS | 45.0% | |
| CGAAAAGAGAGTGAGTGAGT+TGG | + | chr4.2:33097289-33097308 | MS.gene052299:CDS | 45.0% | |
| CGAGAAGGAAGAGAATGTGT+TGG | + | chr4.2:33095603-33095622 | MS.gene052299:CDS | 45.0% | |
| CGCTAAATTGAAAGAGGCTG+AGG | + | chr4.2:33097040-33097059 | MS.gene052299:CDS | 45.0% | |
| CTCAAGCAGAGATTGAACCT+CGG | - | chr4.2:33097876-33097895 | None:intergenic | 45.0% | |
| GAAAGAGCTTCTTCAGGTGA+AGG | + | chr4.2:33095939-33095958 | MS.gene052299:CDS | 45.0% | |
| GAACAGTGTTCTGTCAGAGA+AGG | + | chr4.2:33098132-33098151 | MS.gene052299:CDS | 45.0% | |
| GAATGAGAAGCTGAGTACCT+TGG | + | chr4.2:33098330-33098349 | MS.gene052299:CDS | 45.0% | |
| GACCTTTGCACTTTCCAACT+CGG | - | chr4.2:33096478-33096497 | None:intergenic | 45.0% | |
| GAGGAAAATATCACAGGAGC+CGG | + | chr4.2:33097911-33097930 | MS.gene052299:CDS | 45.0% | |
| GCATCTCATCTCCATCGAAA+AGG | + | chr4.2:33099861-33099880 | MS.gene052299:CDS | 45.0% | |
| GCATCTTGAAGCAGTAGTTG+AGG | + | chr4.2:33098450-33098469 | MS.gene052299:CDS | 45.0% | |
| GCCAGCTTGAATATGAGTCT+CGG | - | chr4.2:33099939-33099958 | None:intergenic | 45.0% | |
| GCTCCTTCAACTTCTCTTCA+AGG | - | chr4.2:33098938-33098957 | None:intergenic | 45.0% | |
| GCTGCAACTTTCTACAGAAG+AGG | + | chr4.2:33096029-33096048 | MS.gene052299:CDS | 45.0% | |
| GCTTGAAACACGCTTCATAG+CGG | + | chr4.2:33096908-33096927 | MS.gene052299:CDS | 45.0% | |
| GGTTCACATGCTGAATCTGA+GGG | + | chr4.2:33096084-33096103 | MS.gene052299:CDS | 45.0% | |
| GTGCTCGACTGTTGAGTTTA+TGG | - | chr4.2:33095237-33095256 | None:intergenic | 45.0% | |
| TACAAATGCAGCTGCAGAAG+AGG | + | chr4.2:33096866-33096885 | MS.gene052299:CDS | 45.0% | |
| TAGATTCAGCTTTCGCGAGT+TGG | - | chr4.2:33099061-33099080 | None:intergenic | 45.0% | |
| TATCCATGTGCTCCTGCAAT+AGG | - | chr4.2:33097088-33097107 | None:intergenic | 45.0% | |
| TCCAGAAGTTCCAGTGACAA+AGG | + | chr4.2:33094986-33095005 | MS.gene052299:CDS | 45.0% | |
| TCCGAGACTCATATTCAAGC+TGG | + | chr4.2:33099935-33099954 | MS.gene052299:CDS | 45.0% | |
| TCGATACAAGAGCTACTCCA+AGG | - | chr4.2:33099994-33100013 | None:intergenic | 45.0% | |
| TCTAATGATGTTGCAGGGTG+AGG | + | chr4.2:33099790-33099809 | MS.gene052299:intron | 45.0% | |
| TCTTCGACAACCTTTGTCAC+TGG | - | chr4.2:33094999-33095018 | None:intergenic | 45.0% | |
| TGAAACTCGTAAAGCTGAGC+TGG | + | chr4.2:33098405-33098424 | MS.gene052299:CDS | 45.0% | |
| TGAAGCACAAGAGAAGGTTC+GGG | + | chr4.2:33095678-33095697 | MS.gene052299:CDS | 45.0% | |
| TGAATCTGAGGGAAACAAGG+CGG | + | chr4.2:33096095-33096114 | MS.gene052299:CDS | 45.0% | |
| TGCATTGCAAAGTAAGCTGC+AGG | + | chr4.2:33099025-33099044 | MS.gene052299:CDS | 45.0% | |
| TGCTGAATCTGAGGGAAACA+AGG | + | chr4.2:33096092-33096111 | MS.gene052299:CDS | 45.0% | |
| TGGTTCACATGCTGAATCTG+AGG | + | chr4.2:33096083-33096102 | MS.gene052299:CDS | 45.0% | |
| TTGACTAGCAGTAGCTGCAA+CGG | - | chr4.2:33096814-33096833 | None:intergenic | 45.0% | |
| ! | AACAGTCGAGCACCGTTTAT+AGG | + | chr4.2:33095244-33095263 | MS.gene052299:intron | 45.0% |
| ! | CTTTCGCAGGTTTAGTTCCT+CGG | - | chr4.2:33096370-33096389 | None:intergenic | 45.0% |
| ! | TGTCACTGGAACTTCTGGAA+TGG | - | chr4.2:33094985-33095004 | None:intergenic | 45.0% |
| ! | TTCCGAGTTGGAAAGTGCAA+AGG | + | chr4.2:33096473-33096492 | MS.gene052299:CDS | 45.0% |
| !! | AAATGGAGACTTGCTGCCTA+AGG | + | chr4.2:33095519-33095538 | MS.gene052299:CDS | 45.0% |
| !! | CTGATTTGGAATGAGAGCTC+TGG | - | chr4.2:33097262-33097281 | None:intergenic | 45.0% |
| AACTCGTAAAGCTGAGCTGG+AGG | + | chr4.2:33098408-33098427 | MS.gene052299:CDS | 50.0% | |
| AAGCTCCCGAAAGAAGATGC+AGG | + | chr4.2:33095993-33096012 | MS.gene052299:CDS | 50.0% | |
| AATGATGTTGCAGGGTGAGG+AGG | + | chr4.2:33099793-33099812 | MS.gene052299:intron | 50.0% | |
| AGCGGCAGAGCAAAAGAATG+TGG | + | chr4.2:33096926-33096945 | MS.gene052299:CDS | 50.0% | |
| ATGATGTTGCAGGGTGAGGA+GGG | + | chr4.2:33099794-33099813 | MS.gene052299:intron | 50.0% | |
| CACGTCTCTCTCAGCATCAT+TGG | - | chr4.2:33096988-33097007 | None:intergenic | 50.0% | |
| GACAAAGGTTGTCGAAGAGG+TGG | + | chr4.2:33095001-33095020 | MS.gene052299:CDS | 50.0% | |
| GAGAAGCTGAGTACCTTGGA+GGG | + | chr4.2:33098334-33098353 | MS.gene052299:CDS | 50.0% | |
| GAGGAGCTGCATAAGCAAAG+TGG | + | chr4.2:33096063-33096082 | MS.gene052299:CDS | 50.0% | |
| GGAAAATATCACAGGAGCCG+GGG | + | chr4.2:33097913-33097932 | MS.gene052299:CDS | 50.0% | |
| GTGTTTCCGAAGTCTTTCGC+AGG | - | chr4.2:33096383-33096402 | None:intergenic | 50.0% | |
| TGAGAAGCTGAGTACCTTGG+AGG | + | chr4.2:33098333-33098352 | MS.gene052299:CDS | 50.0% | |
| ! | TAGCCTATTGCAGGAGCACA+TGG | + | chr4.2:33097082-33097101 | MS.gene052299:CDS | 50.0% |
| ! | TCTAGTAGACGAGTTGACCG+AGG | + | chr4.2:33096350-33096369 | MS.gene052299:CDS | 50.0% |
| ! | TGCTGAAGGAGTTGTCGCTT+CGG | - | chr4.2:33099903-33099922 | None:intergenic | 50.0% |
| !! | CTTCAGGTGAAGGAAGCGTT+TGG | + | chr4.2:33095949-33095968 | MS.gene052299:CDS | 50.0% |
| !! | TTTGCAGGTCGGAAGTGTTC+AGG | + | chr4.2:33099215-33099234 | MS.gene052299:intron | 50.0% |
| AGAGAAGGTTCGGGAACTCG+AGG | + | chr4.2:33095687-33095706 | MS.gene052299:CDS | 55.0% | |
| CTCTGCTGCACTTGTCGAGA+AGG | + | chr4.2:33098594-33098613 | MS.gene052299:CDS | 55.0% | |
| GCAGCTCAGCACTCTTGAAG+AGG | + | chr4.2:33095891-33095910 | MS.gene052299:CDS | 55.0% | |
| GCTGCGCTCATTGTTCATGG+TGG | - | chr4.2:33097219-33097238 | None:intergenic | 55.0% | |
| GGTGGCTCGATCTTCATGCT+CGG | - | chr4.2:33097201-33097220 | None:intergenic | 55.0% | |
| TCGGCTGCGCTCATTGTTCA+TGG | - | chr4.2:33097222-33097241 | None:intergenic | 55.0% | |
| ! | AGAAGAGGCACGGAAGTTCG+AGG | + | chr4.2:33096044-33096063 | MS.gene052299:CDS | 55.0% |
| AGCAGTAGCTGCAACGGCTC+CGG | - | chr4.2:33096808-33096827 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 33094963 | 33100048 | 33094963 | ID=MS.gene052299 |
| chr4.2 | mRNA | 33094963 | 33100048 | 33094963 | ID=MS.gene052299.t1;Parent=MS.gene052299 |
| chr4.2 | exon | 33094963 | 33095046 | 33094963 | ID=MS.gene052299.t1.exon1;Parent=MS.gene052299.t1 |
| chr4.2 | CDS | 33094963 | 33095046 | 33094963 | ID=cds.MS.gene052299.t1;Parent=MS.gene052299.t1 |
| chr4.2 | exon | 33095514 | 33098708 | 33095514 | ID=MS.gene052299.t1.exon2;Parent=MS.gene052299.t1 |
| chr4.2 | CDS | 33095514 | 33098708 | 33095514 | ID=cds.MS.gene052299.t1;Parent=MS.gene052299.t1 |
| chr4.2 | exon | 33098852 | 33099094 | 33098852 | ID=MS.gene052299.t1.exon3;Parent=MS.gene052299.t1 |
| chr4.2 | CDS | 33098852 | 33099094 | 33098852 | ID=cds.MS.gene052299.t1;Parent=MS.gene052299.t1 |
| chr4.2 | exon | 33099222 | 33099380 | 33099222 | ID=MS.gene052299.t1.exon4;Parent=MS.gene052299.t1 |
| chr4.2 | CDS | 33099222 | 33099380 | 33099222 | ID=cds.MS.gene052299.t1;Parent=MS.gene052299.t1 |
| chr4.2 | exon | 33099521 | 33099676 | 33099521 | ID=MS.gene052299.t1.exon5;Parent=MS.gene052299.t1 |
| chr4.2 | CDS | 33099521 | 33099676 | 33099521 | ID=cds.MS.gene052299.t1;Parent=MS.gene052299.t1 |
| chr4.2 | exon | 33099806 | 33100048 | 33099806 | ID=MS.gene052299.t1.exon6;Parent=MS.gene052299.t1 |
| chr4.2 | CDS | 33099806 | 33100048 | 33099806 | ID=cds.MS.gene052299.t1;Parent=MS.gene052299.t1 |
| Gene Sequence |
| Protein sequence |
