AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055823

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055823.t1 MTR_2g090255 96.618 207 7 0 27 233 46 252 8.81e-153 424
MS.gene055823.t1 MTR_0040s0140 82.609 207 36 0 27 233 50 256 4.94e-137 385
MS.gene055823.t1 MTR_5g076950 59.709 206 82 1 28 233 60 264 7.53e-92 271
MS.gene055823.t1 MTR_5g075320 55.340 206 90 1 28 233 48 251 2.78e-84 251
MS.gene055823.t1 MTR_3g435430 53.883 206 93 1 28 233 44 247 1.47e-82 246
MS.gene055823.t1 MTR_3g064510 57.277 213 83 4 28 233 73 284 2.19e-82 248
MS.gene055823.t1 MTR_3g094060 54.369 206 92 1 28 233 50 253 2.83e-82 246
MS.gene055823.t1 MTR_5g079950 51.456 206 100 0 28 233 52 257 5.21e-82 246
MS.gene055823.t1 MTR_3g094040 54.369 206 92 1 28 233 50 253 9.73e-82 244
MS.gene055823.t1 MTR_4g081950 54.146 205 92 1 28 232 80 282 2.16e-81 245
MS.gene055823.t1 MTR_2g097030 51.456 206 100 0 28 233 53 258 2.42e-81 244
MS.gene055823.t1 MTR_3g466790 53.883 206 93 1 28 233 51 254 2.65e-81 244
MS.gene055823.t1 MTR_7g061720 50.971 206 101 0 28 233 51 256 4.19e-81 243
MS.gene055823.t1 MTR_3g466760 53.883 206 93 1 28 233 57 260 4.71e-81 243
MS.gene055823.t1 MTR_5g041700 51.942 206 97 1 28 233 44 247 2.41e-80 241
MS.gene055823.t1 MTR_7g013140 50.962 208 100 1 24 231 43 248 5.61e-78 235
MS.gene055823.t1 MTR_4g063975 51.456 206 100 0 28 233 51 256 1.99e-76 231
MS.gene055823.t1 MTR_7g013150 49.519 208 103 1 24 231 45 250 1.44e-75 229
MS.gene055823.t1 MTR_7g011060 50.000 206 93 2 28 233 45 240 2.50e-75 228
MS.gene055823.t1 MTR_4g124340 50.971 206 100 1 28 232 78 283 4.91e-74 226
MS.gene055823.t1 MTR_1g085460 51.208 207 97 3 28 231 49 254 1.25e-73 224
MS.gene055823.t1 MTR_7g110990 51.220 205 96 3 28 229 31 234 4.80e-73 222
MS.gene055823.t1 MTR_7g111010 51.220 205 96 3 28 229 46 249 4.88e-73 223
MS.gene055823.t1 MTR_8g058990 49.758 207 102 1 24 230 45 249 1.89e-72 221
MS.gene055823.t1 MTR_7g013120 49.275 207 102 2 27 232 47 251 2.22e-70 216
MS.gene055823.t1 MTR_8g464350 48.058 206 105 1 24 229 46 249 3.18e-70 216
MS.gene055823.t1 MTR_1g026020 46.117 206 108 2 28 231 48 252 5.35e-67 207
MS.gene055823.t1 MTR_6g012520 51.456 206 90 2 28 233 47 242 3.48e-65 202
MS.gene055823.t1 MTR_4g102450 45.320 203 109 2 28 229 55 256 2.78e-61 193
MS.gene055823.t1 MTR_5g011210 42.601 223 119 3 17 231 38 259 1.25e-60 191
MS.gene055823.t1 MTR_0008s0120 50.000 108 54 0 123 230 88 195 1.53e-34 122
MS.gene055823.t1 MTR_6g012500 52.000 100 48 0 134 233 181 280 9.92e-33 120
MS.gene055823.t1 MTR_2g090270 28.704 216 128 8 28 231 54 255 4.08e-23 94.4
MS.gene055823.t1 MTR_0118s0070 33.180 217 117 12 28 229 67 270 6.42e-23 94.4
MS.gene055823.t1 MTR_4g028640 31.532 222 109 12 28 229 61 259 5.28e-22 91.7
MS.gene055823.t1 MTR_0122s0020 28.241 216 129 8 28 231 60 261 1.52e-21 90.5
MS.gene055823.t1 MTR_2g090265 28.241 216 129 9 28 231 52 253 4.44e-21 89.0
MS.gene055823.t1 MTR_0809s0010 27.189 217 126 10 28 229 66 265 3.58e-15 73.2
MS.gene055823.t1 MTR_5g013440 29.167 216 136 9 23 231 43 248 5.38e-15 72.4
MS.gene055823.t1 MTR_1g085365 50.000 56 28 0 178 233 4 59 1.15e-13 63.9
MS.gene055823.t1 MTR_4g075790 27.523 218 123 11 28 229 40 238 5.95e-13 66.6
MS.gene055823.t1 MTR_4g099370 27.014 211 137 8 26 229 45 245 2.83e-11 62.0
MS.gene055823.t1 MTR_0122s0020 33.058 121 59 4 28 140 60 166 4.84e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055823.t1 AT4G38210 68.447 206 65 0 28 233 49 254 2.29e-109 315
MS.gene055823.t1 AT3G03220 56.311 206 89 1 28 233 59 263 4.84e-88 261
MS.gene055823.t1 AT5G02260 50.971 206 101 0 28 233 51 256 3.31e-83 249
MS.gene055823.t1 AT2G37640 52.913 206 97 0 28 233 30 235 9.77e-83 247
MS.gene055823.t1 AT3G55500 53.883 206 95 0 28 233 53 258 9.95e-83 248
MS.gene055823.t1 AT2G37640 52.913 206 97 0 28 233 55 260 1.41e-82 247
MS.gene055823.t1 AT2G39700 51.942 206 99 0 28 233 50 255 5.34e-82 246
MS.gene055823.t1 AT5G05290 52.657 207 95 2 28 233 51 255 1.35e-81 244
MS.gene055823.t1 AT2G40610 53.140 207 94 2 28 233 49 253 7.34e-81 243
MS.gene055823.t1 AT5G56320 51.456 206 98 1 28 233 48 251 1.15e-80 242
MS.gene055823.t1 AT5G56320 51.456 206 98 1 28 233 48 251 1.15e-80 242
MS.gene055823.t1 AT5G56320 51.456 206 98 1 28 233 48 251 3.25e-80 243
MS.gene055823.t1 AT1G69530 53.883 206 93 1 28 233 46 249 1.52e-79 239
MS.gene055823.t1 AT1G69530 53.883 206 93 1 28 233 46 249 1.52e-79 239
MS.gene055823.t1 AT2G03090 51.942 206 97 1 28 233 49 252 7.90e-79 237
MS.gene055823.t1 AT1G69530 54.229 201 90 1 28 228 46 244 1.07e-77 235
MS.gene055823.t1 AT2G28950 50.485 206 102 0 28 233 50 255 1.96e-76 231
MS.gene055823.t1 AT1G26770 51.942 206 97 1 28 233 45 248 1.59e-73 224
MS.gene055823.t1 AT1G26770 51.942 206 97 1 28 233 55 258 2.10e-73 224
MS.gene055823.t1 AT5G39280 51.442 208 97 2 24 231 69 272 1.01e-72 223
MS.gene055823.t1 AT5G39300 50.481 208 99 2 24 231 70 273 1.51e-71 219
MS.gene055823.t1 AT5G39290 51.442 208 97 2 24 231 73 276 2.25e-71 219
MS.gene055823.t1 AT5G39270 50.962 208 98 2 24 231 73 276 3.70e-71 219
MS.gene055823.t1 AT3G29030 48.544 206 97 2 28 233 57 253 5.76e-71 218
MS.gene055823.t1 AT1G20190 48.293 205 101 3 28 229 45 247 3.99e-69 213
MS.gene055823.t1 AT4G01630 47.317 205 104 3 28 229 47 250 5.25e-67 207
MS.gene055823.t1 AT1G62980 45.854 205 109 2 28 231 50 253 1.67e-66 206
MS.gene055823.t1 AT5G39260 46.860 207 101 2 25 231 62 259 1.11e-64 202
MS.gene055823.t1 AT5G39310 46.890 209 106 3 24 231 105 309 4.55e-64 202
MS.gene055823.t1 AT3G15370 48.113 212 98 6 28 233 46 251 2.83e-63 197
MS.gene055823.t1 AT1G69530 46.117 206 79 2 28 233 46 219 7.72e-63 196
MS.gene055823.t1 AT3G15370 48.113 212 98 6 28 233 76 281 1.33e-62 197
MS.gene055823.t1 AT1G69530 53.374 163 74 1 28 190 46 206 1.25e-61 193
MS.gene055823.t1 AT1G20190 47.619 189 94 3 44 229 2 188 2.51e-61 191
MS.gene055823.t1 AT1G12560 43.478 207 114 3 24 229 52 256 4.74e-60 190
MS.gene055823.t1 AT4G28250 28.571 217 128 7 28 231 55 257 4.10e-23 94.7
MS.gene055823.t1 AT2G20750 29.358 218 128 8 28 231 59 264 6.14e-21 89.0
MS.gene055823.t1 AT4G28250 28.037 214 127 7 28 231 55 251 1.06e-20 87.8
MS.gene055823.t1 AT1G65680 29.032 217 125 8 28 229 66 268 1.41e-20 87.8
MS.gene055823.t1 AT1G65681 28.571 217 124 10 28 229 17 217 1.60e-19 84.0
MS.gene055823.t1 AT2G45110 30.275 218 121 12 28 229 52 254 1.20e-18 82.4
MS.gene055823.t1 AT3G60570 26.267 217 132 9 28 231 5 206 9.16e-13 65.5
MS.gene055823.t1 AT3G60570 27.650 217 129 10 28 231 53 254 2.89e-12 65.1
MS.gene055823.t1 AT4G17030 25.778 225 124 10 25 229 43 244 1.98e-11 62.4
MS.gene055823.t1 AT2G20750 28.205 156 90 5 28 172 59 203 5.66e-11 60.8
MS.gene055823.t1 AT4G28250 33.621 116 55 4 28 135 55 156 8.89e-11 60.1

Find 54 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTCTGTGCTCCAAATTA+TGG 0.193089 2.1:+10874789 MS.gene055823:CDS
GACATACACAAGGTTGATTA+TGG 0.228803 2.1:+10874633 MS.gene055823:CDS
TATGGACTTTCATCTGATTA+TGG 0.229268 2.1:+10874807 MS.gene055823:CDS
GCTCCTGCAAACTGGCAATT+TGG 0.231880 2.1:+10875847 MS.gene055823:CDS
TCAGATGAAAGTCCATAATT+TGG 0.250351 2.1:-10874801 None:intergenic
ACAGAAGGAGCTTGTGGTTA+TGG 0.312063 2.1:+10874609 MS.gene055823:intron
GGATACCAATGGCAAGGAAT+TGG 0.318465 2.1:+10875728 MS.gene055823:CDS
CAGGTTCTTATTACAAATGT+AGG 0.326793 2.1:+10875655 MS.gene055823:CDS
CTCACTGGGCTCTTCAAATT+CGG 0.347595 2.1:-10872043 None:intergenic
GATACCAATGGCAAGGAATT+GGG 0.352310 2.1:+10875729 MS.gene055823:CDS
TGTCCAAATTGCCAGTTTGC+AGG 0.359469 2.1:-10875850 None:intergenic
CACATCTTATGGTGCTTGAT+TGG 0.373766 2.1:+10874738 MS.gene055823:CDS
TGGAAGTGATCATTTCTATC+AGG 0.380334 2.1:+10875636 MS.gene055823:CDS
AAAGTGAAGGGAACTAAAAC+TGG 0.381812 2.1:+10875703 MS.gene055823:CDS
AAAACAACCTCTATCCTTTG+AGG 0.382211 2.1:+10875783 MS.gene055823:CDS
CAAGGAATTGGGGACAAAAC+TGG 0.385261 2.1:+10875740 MS.gene055823:CDS
CAATTTGGACAAACATTTGA+AGG 0.398107 2.1:+10875862 MS.gene055823:CDS
GATTATGGGATGCACAGTAC+TGG 0.405924 2.1:+10874648 MS.gene055823:CDS
GACTCAAGAGCTTCTGAGCC+TGG 0.421253 2.1:+10872014 MS.gene055823:CDS
TAGTGCCAATTCAATATAGA+AGG 0.438853 2.1:+10874910 MS.gene055823:CDS
ACAATGTTGCTCCTGCAAAC+TGG 0.452206 2.1:+10875839 MS.gene055823:CDS
TGTCCCCAATTCCTTGCCAT+TGG 0.454064 2.1:-10875733 None:intergenic
AGCTCTTGAGTCTCAGTCTC+TGG 0.464095 2.1:-10872003 None:intergenic
CTCAGTCTCTGGCGCAATGG+AGG 0.472304 2.1:-10871992 None:intergenic
GACATCTCAAAATGCTCACT+TGG 0.480475 2.1:-10874846 None:intergenic
GATGTGTTGATCACATCTTA+TGG 0.481755 2.1:+10874727 MS.gene055823:CDS
AGGTTCTTATTACAAATGTA+GGG 0.493659 2.1:+10875656 MS.gene055823:CDS
ACATACACAAGGTTGATTAT+GGG 0.504833 2.1:+10874634 MS.gene055823:CDS
CTTCAAATTCGGCTACGGCC+AGG 0.505897 2.1:-10872032 None:intergenic
TCTTATTACAAATGTAGGGT+TGG 0.510367 2.1:+10875660 MS.gene055823:CDS
ATTACAAATGTAGGGTTGGA+TGG 0.520180 2.1:+10875664 MS.gene055823:CDS
AGGGTTAAATGCAAAAGAAC+TGG 0.532567 2.1:+10875592 MS.gene055823:intron
TTCAACAAAGGGAGTACTTG+TGG 0.535641 2.1:+10874687 MS.gene055823:CDS
TTTCATCTGATTATGGTGGA+TGG 0.538208 2.1:+10874814 MS.gene055823:CDS
AGTCTCAGTCTCTGGCGCAA+TGG 0.543923 2.1:-10871995 None:intergenic
ATTATGGGATGCACAGTACT+GGG 0.552361 2.1:+10874649 MS.gene055823:CDS
TTGATTACAGAAGGAGCTTG+TGG 0.560639 2.1:+10874603 MS.gene055823:intron
TTTGAGGTTACCATCACAAG+TGG 0.583406 2.1:+10875799 MS.gene055823:CDS
ACTTGTGATGGTAACCTCAA+AGG 0.584202 2.1:-10875797 None:intergenic
TGAAGGGAACTAAAACTGGA+TGG 0.585046 2.1:+10875707 MS.gene055823:CDS
ATACCAATGGCAAGGAATTG+GGG 0.588690 2.1:+10875730 MS.gene055823:CDS
GGACTTTCATCTGATTATGG+TGG 0.599208 2.1:+10874810 MS.gene055823:CDS
TGTAGGGTTGGATGGTGAAG+TGG 0.599601 2.1:+10875672 MS.gene055823:CDS
GGCTTGAAATTCACAATGAG+TGG 0.606308 2.1:+10875616 MS.gene055823:CDS
GGGCTCTTCAAATTCGGCTA+CGG 0.609065 2.1:-10872037 None:intergenic
GTAACAGTAACAACTACAGA+AGG 0.615173 2.1:-10874765 None:intergenic
CTGGATGGATACCAATGGCA+AGG 0.617275 2.1:+10875722 MS.gene055823:CDS
ATGGTAACCTCAAAGGATAG+AGG 0.633438 2.1:-10875790 None:intergenic
TAAAACTGGATGGATACCAA+TGG 0.633872 2.1:+10875717 MS.gene055823:CDS
GTTAAATGCAAAAGAACTGG+TGG 0.636547 2.1:+10875595 MS.gene055823:CDS
AGTGGTTGCTGTAAAAGTGA+AGG 0.657922 2.1:+10875690 MS.gene055823:CDS
TCTGGCGCAATGGAGGCGCG+AGG 0.660194 2.1:-10871985 None:intergenic
GTGGTTGCTGTAAAAGTGAA+GGG 0.675102 2.1:+10875691 MS.gene055823:CDS
TGGTTATGGAGACATACACA+AGG 0.732656 2.1:+10874623 MS.gene055823:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTAATAAAAAATTT+TGG - chr2.1:10872214-10872233 None:intergenic 0.0%
!!! TTTTATTAATAAAAAATTTT+GGG - chr2.1:10872213-10872232 None:intergenic 0.0%
!!! ATTTTGAAAAAAAGAAAAAT+GGG + chr2.1:10875253-10875272 MS.gene055823:intron 10.0%
!!! TATTTTGAAAAAAAGAAAAA+TGG + chr2.1:10875252-10875271 MS.gene055823:intron 10.0%
!! AAATTATCCTTATTAACTAT+TGG - chr2.1:10873386-10873405 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2.1:10873385-10873404 MS.gene055823:intron 15.0%
!! GGATGAAATTTAATAAATAA+GGG + chr2.1:10875176-10875195 MS.gene055823:intron 15.0%
!! TCAAATGAACTATTTAATTA+AGG + chr2.1:10872469-10872488 MS.gene055823:intron 15.0%
!! TGGATGAAATTTAATAAATA+AGG + chr2.1:10875175-10875194 MS.gene055823:intron 15.0%
!!! AAACAACTTTTTATTTCAAA+TGG + chr2.1:10873921-10873940 MS.gene055823:intron 15.0%
!!! AACAACTTTTTATTTCAAAT+GGG + chr2.1:10873922-10873941 MS.gene055823:intron 15.0%
!!! AAGTAAAAAACAAACATTTT+AGG - chr2.1:10873089-10873108 None:intergenic 15.0%
!!! AATAAATAAGGGTATAATAA+TGG + chr2.1:10875187-10875206 MS.gene055823:intron 15.0%
!!! ACAAGTTTATAGTTTAATTT+AGG - chr2.1:10872910-10872929 None:intergenic 15.0%
!!! ACATCAAAATTCTTTTTTAT+TGG + chr2.1:10875415-10875434 MS.gene055823:intron 15.0%
!!! ATCAAAATTCTTTTTTATTG+GGG + chr2.1:10875417-10875436 MS.gene055823:intron 15.0%
!!! ATTTTCAGTTATAAAAAGAA+GGG + chr2.1:10873848-10873867 MS.gene055823:intron 15.0%
!!! CATCAAAATTCTTTTTTATT+GGG + chr2.1:10875416-10875435 MS.gene055823:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr2.1:10873259-10873278 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2.1:10873362-10873381 None:intergenic 15.0%
!!! TTTTAGAAAGAATTATTTGA+TGG - chr2.1:10873643-10873662 None:intergenic 15.0%
!! AAAATCCATATAAATTAGAG+TGG + chr2.1:10872388-10872407 MS.gene055823:intron 20.0%
!! AAACAATTAACACTAAACAA+GGG - chr2.1:10873882-10873901 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr2.1:10873376-10873395 MS.gene055823:intron 20.0%
!! AAATTAAACAAATGTTGTTC+TGG + chr2.1:10873162-10873181 MS.gene055823:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr2.1:10873299-10873318 None:intergenic 20.0%
!! CCTATTTATAAGAGAAATTT+GGG - chr2.1:10872600-10872619 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAATT+TGG - chr2.1:10872601-10872620 None:intergenic 20.0%
!!! ATTAATTGTGTTGATTTTGA+TGG + chr2.1:10875092-10875111 MS.gene055823:intron 20.0%
!!! CATTTTCAGTTATAAAAAGA+AGG + chr2.1:10873847-10873866 MS.gene055823:intron 20.0%
!!! TTAAGTCTTTTTTAATGCTT+AGG + chr2.1:10875520-10875539 MS.gene055823:intron 20.0%
!!! TTTTACCTTCTATATTGAAT+TGG - chr2.1:10874918-10874937 None:intergenic 20.0%
!!! TTTTGATAAGCTTATTCATT+AGG - chr2.1:10872874-10872893 None:intergenic 20.0%
!!! TTTTTACTTATAAATGTGAC+CGG + chr2.1:10873100-10873119 MS.gene055823:intron 20.0%
! AAACGACTATTATTTAGAGA+CGG - chr2.1:10875043-10875062 None:intergenic 25.0%
! AAATATTAGAGCTGTCAAAA+TGG - chr2.1:10874512-10874531 None:intergenic 25.0%
! AAGTATGCAATAACATAAAG+AGG + chr2.1:10872769-10872788 MS.gene055823:intron 25.0%
! AATATTAGAGCTGTCAAAAT+GGG - chr2.1:10874511-10874530 None:intergenic 25.0%
! ACTCAAAAGTTTAAGTAAGT+TGG + chr2.1:10874536-10874555 MS.gene055823:intron 25.0%
! AGGTTCTTATTACAAATGTA+GGG + chr2.1:10875656-10875675 MS.gene055823:CDS 25.0%
! ATTTCTCTTATAAATAGGAC+CGG + chr2.1:10872602-10872621 MS.gene055823:intron 25.0%
! CCACTAACTACAATTAATAA+GGG - chr2.1:10875144-10875163 None:intergenic 25.0%
! CCCAAATTTCTCTTATAAAT+AGG + chr2.1:10872597-10872616 MS.gene055823:intron 25.0%
! CTCAAAAGTTTAAGTAAGTT+GGG + chr2.1:10874537-10874556 MS.gene055823:intron 25.0%
! CTCAACTTTCTCTTATAAAT+AGG - chr2.1:10872518-10872537 None:intergenic 25.0%
! GAAACAATTAACACTAAACA+AGG - chr2.1:10873883-10873902 None:intergenic 25.0%
! GAAGGTAAAATACATTGTAT+AGG + chr2.1:10874928-10874947 MS.gene055823:intron 25.0%
! GTTAGAAAGCAAAAAAACAT+GGG + chr2.1:10873775-10873794 MS.gene055823:intron 25.0%
! TAATAAAATGTGCCACATAA+GGG + chr2.1:10872225-10872244 MS.gene055823:intron 25.0%
! TACTTATAAATGTGACTAGA+AGG - chr2.1:10872986-10873005 None:intergenic 25.0%
! TCAACAAAAGTTTATGTATC+TGG + chr2.1:10872538-10872557 MS.gene055823:intron 25.0%
! TCCACTAACTACAATTAATA+AGG - chr2.1:10875145-10875164 None:intergenic 25.0%
! TTAATAAAATGTGCCACATA+AGG + chr2.1:10872224-10872243 MS.gene055823:intron 25.0%
! TTCAACCACTCTAATTTATA+TGG - chr2.1:10872396-10872415 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr2.1:10874345-10874364 MS.gene055823:intron 25.0%
!!! AGTTTTATGCACGATTATTA+AGG + chr2.1:10875064-10875083 MS.gene055823:intron 25.0%
!!! ATGCGCTTATAGTTTTAAAT+TGG - chr2.1:10875446-10875465 None:intergenic 25.0%
!!! GAATTTTGATGTATCCTTAA+CGG - chr2.1:10875407-10875426 None:intergenic 25.0%
!!! GTTTTTTTTCTTCTTTCTAG+TGG - chr2.1:10873905-10873924 None:intergenic 25.0%
AAGAGACAATTATTGTGAGA+TGG + chr2.1:10875278-10875297 MS.gene055823:intron 30.0%
ACATACATCCAAGATAAAGA+TGG + chr2.1:10874039-10874058 MS.gene055823:intron 30.0%
ATATGTGGCCTAATAACAAA+TGG - chr2.1:10874165-10874184 None:intergenic 30.0%
ATATTGCAGAGATGAAATTG+AGG + chr2.1:10872822-10872841 MS.gene055823:intron 30.0%
CAATTTGGACAAACATTTGA+AGG + chr2.1:10875862-10875881 MS.gene055823:CDS 30.0%
CAGGTTCTTATTACAAATGT+AGG + chr2.1:10875655-10875674 MS.gene055823:CDS 30.0%
CATACATCCAAGATAAAGAT+GGG + chr2.1:10874040-10874059 MS.gene055823:intron 30.0%
CCCTTATTAATTGTAGTTAG+TGG + chr2.1:10875141-10875160 MS.gene055823:intron 30.0%
CTGTTTACTTTATCCAAACA+GGG + chr2.1:10875496-10875515 MS.gene055823:intron 30.0%
CTTTCTCTTATAAATAGGAC+CGG - chr2.1:10872513-10872532 None:intergenic 30.0%
GAAATTTGGGTCAACAAAAA+TGG - chr2.1:10872587-10872606 None:intergenic 30.0%
GGTTAGAAAGCAAAAAAACA+TGG + chr2.1:10873774-10873793 MS.gene055823:intron 30.0%
GTAGAATGTAGATGATAAGA+TGG - chr2.1:10872357-10872376 None:intergenic 30.0%
TAGTGCCAATTCAATATAGA+AGG + chr2.1:10874910-10874929 MS.gene055823:CDS 30.0%
TATGGACTTTCATCTGATTA+TGG + chr2.1:10874807-10874826 MS.gene055823:CDS 30.0%
TATGTGGCCTAATAACAAAT+GGG - chr2.1:10874164-10874183 None:intergenic 30.0%
TCAGATGAAAGTCCATAATT+TGG - chr2.1:10874804-10874823 None:intergenic 30.0%
TCTTATTACAAATGTAGGGT+TGG + chr2.1:10875660-10875679 MS.gene055823:CDS 30.0%
! ACATACACAAGGTTGATTAT+GGG + chr2.1:10874634-10874653 MS.gene055823:CDS 30.0%
! AGCACAATTTTGTTCAACAA+AGG + chr2.1:10874675-10874694 MS.gene055823:CDS 30.0%
! AGTTTAAGTAAGTTGGGTTT+CGG + chr2.1:10874543-10874562 MS.gene055823:intron 30.0%
! CACTATATCAGATTTTCTCT+TGG - chr2.1:10874895-10874914 None:intergenic 30.0%
! CGGAGGAAGTATAAAATAAT+GGG + chr2.1:10872622-10872641 MS.gene055823:intron 30.0%
! GCACAATTTTGTTCAACAAA+GGG + chr2.1:10874676-10874695 MS.gene055823:CDS 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr2.1:10873468-10873487 MS.gene055823:intron 30.0%
!! CCATTATTTTATACTTCCTC+CGG - chr2.1:10872624-10872643 None:intergenic 30.0%
!!! TAGAAAGTGTCCTTGTTTTT+AGG - chr2.1:10873706-10873725 None:intergenic 30.0%
!!! TGTTTTTTTGCTTTCTAACC+AGG - chr2.1:10873774-10873793 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr2.1:10873467-10873486 None:intergenic 30.0%
!!! TTTTTTAATGCTTAGGCATC+TGG + chr2.1:10875527-10875546 MS.gene055823:intron 30.0%
!!! TTTTTTTCTTCCAAACCCTA+AGG + chr2.1:10872312-10872331 MS.gene055823:intron 30.0%
AAAAAGACTTAAGCCCTGTT+TGG - chr2.1:10875512-10875531 None:intergenic 35.0%
AAAACAACCTCTATCCTTTG+AGG + chr2.1:10875783-10875802 MS.gene055823:CDS 35.0%
AAAGTGAAGGGAACTAAAAC+TGG + chr2.1:10875703-10875722 MS.gene055823:CDS 35.0%
ACCTAGTCCATGTAAAACTA+TGG + chr2.1:10874459-10874478 MS.gene055823:intron 35.0%
AGACAATTATTGTGAGATGG+AGG + chr2.1:10875281-10875300 MS.gene055823:intron 35.0%
AGGGTTAAATGCAAAAGAAC+TGG + chr2.1:10875592-10875611 MS.gene055823:intron 35.0%
AGTACAAGCCTAAAACGATT+GGG - chr2.1:10874227-10874246 None:intergenic 35.0%
AGTTAGTGGAGTAGTTAAGT+TGG + chr2.1:10875155-10875174 MS.gene055823:intron 35.0%
AGTTTATATCTTACTCCCTC+CGG - chr2.1:10873122-10873141 None:intergenic 35.0%
ATAAGATGGTGTCTCATTAC+AGG - chr2.1:10872343-10872362 None:intergenic 35.0%
ATTACAAATGTAGGGTTGGA+TGG + chr2.1:10875664-10875683 MS.gene055823:CDS 35.0%
CACATTGTCAGAACTAAAAC+TGG - chr2.1:10874575-10874594 None:intergenic 35.0%
CCTAGTCCATGTAAAACTAT+GGG + chr2.1:10874460-10874479 MS.gene055823:intron 35.0%
CTTCTTACACAGATGAAGAA+TGG + chr2.1:10874001-10874020 MS.gene055823:intron 35.0%
GACAATTATTGTGAGATGGA+GGG + chr2.1:10875282-10875301 MS.gene055823:intron 35.0%
GACTATTATTTAGAGACGGA+GGG - chr2.1:10875039-10875058 None:intergenic 35.0%
GATTTCTGTGCTCCAAATTA+TGG + chr2.1:10874789-10874808 MS.gene055823:CDS 35.0%
GCTGTTTACTTTATCCAAAC+AGG + chr2.1:10875495-10875514 MS.gene055823:intron 35.0%
GGTTGTGAATTGATTACAGA+AGG + chr2.1:10874594-10874613 MS.gene055823:intron 35.0%
GTAACAGTAACAACTACAGA+AGG - chr2.1:10874768-10874787 None:intergenic 35.0%
GTTAAATGCAAAAGAACTGG+TGG + chr2.1:10875595-10875614 MS.gene055823:CDS 35.0%
TAAAACTGGATGGATACCAA+TGG + chr2.1:10875717-10875736 MS.gene055823:CDS 35.0%
TACTTATAAATGTGACCGGA+GGG + chr2.1:10873104-10873123 MS.gene055823:intron 35.0%
TCATTACAGGTTAGACCTTA+GGG - chr2.1:10872330-10872349 None:intergenic 35.0%
TGGAAGTGATCATTTCTATC+AGG + chr2.1:10875636-10875655 MS.gene055823:CDS 35.0%
TGTACTGTGAAGCACAAATA+CGG + chr2.1:10874241-10874260 MS.gene055823:intron 35.0%
TTACTTATAAATGTGACCGG+AGG + chr2.1:10873103-10873122 MS.gene055823:intron 35.0%
! ACTTTCTAGAGAAAGGACAA+AGG + chr2.1:10873718-10873737 MS.gene055823:intron 35.0%
! CCGGAGGAAGTATAAAATAA+TGG + chr2.1:10872621-10872640 MS.gene055823:intron 35.0%
! GACATACACAAGGTTGATTA+TGG + chr2.1:10874633-10874652 MS.gene055823:CDS 35.0%
! GATGTGTTGATCACATCTTA+TGG + chr2.1:10874727-10874746 MS.gene055823:CDS 35.0%
! GCAATCAAGTTTTCACATTG+AGG + chr2.1:10873550-10873569 MS.gene055823:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr2.1:10873337-10873356 None:intergenic 35.0%
! GTTTAAGTAAGTTGGGTTTC+GGG + chr2.1:10874544-10874563 MS.gene055823:intron 35.0%
! TAAAAAGGCCCAATCGTTTT+AGG + chr2.1:10874216-10874235 MS.gene055823:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr2.1:10873333-10873352 None:intergenic 35.0%
! TTTCATCTGATTATGGTGGA+TGG + chr2.1:10874814-10874833 MS.gene055823:CDS 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2.1:10873233-10873252 None:intergenic 35.0%
!! GATTGTTTTTCCACTTGTGA+TGG - chr2.1:10875812-10875831 None:intergenic 35.0%
!!! AAAGTGTCCTTGTTTTTAGG+CGG - chr2.1:10873703-10873722 None:intergenic 35.0%
!!! CAGTTTTAGTTCTGACAATG+TGG + chr2.1:10874573-10874592 MS.gene055823:intron 35.0%
AAAGATGGGTCTCTCATTAC+AGG + chr2.1:10874054-10874073 MS.gene055823:intron 40.0%
ACTACGTAAATGAGCGGAAT+TGG + chr2.1:10874133-10874152 MS.gene055823:intron 40.0%
ACTACTGTGGGCAGATAAAA+AGG + chr2.1:10874201-10874220 MS.gene055823:intron 40.0%
ACTTGTGATGGTAACCTCAA+AGG - chr2.1:10875800-10875819 None:intergenic 40.0%
AGTCGCGAACCTTTATATTG+CGG + chr2.1:10875354-10875373 MS.gene055823:intron 40.0%
AGTGGTTGCTGTAAAAGTGA+AGG + chr2.1:10875690-10875709 MS.gene055823:CDS 40.0%
ATACCAATGGCAAGGAATTG+GGG + chr2.1:10875730-10875749 MS.gene055823:CDS 40.0%
ATGGTAACCTCAAAGGATAG+AGG - chr2.1:10875793-10875812 None:intergenic 40.0%
ATTATGGGATGCACAGTACT+GGG + chr2.1:10874649-10874668 MS.gene055823:CDS 40.0%
ATTCCGCTCATTTACGTAGT+AGG - chr2.1:10874133-10874152 None:intergenic 40.0%
CAAACTAGAACCTTGAATCC+TGG + chr2.1:10873753-10873772 MS.gene055823:intron 40.0%
CACATCTTATGGTGCTTGAT+TGG + chr2.1:10874738-10874757 MS.gene055823:CDS 40.0%
CAGTACAAGCCTAAAACGAT+TGG - chr2.1:10874228-10874247 None:intergenic 40.0%
CGACTATTATTTAGAGACGG+AGG - chr2.1:10875040-10875059 None:intergenic 40.0%
CTCATTACAGGTTAGACCTT+AGG - chr2.1:10872331-10872350 None:intergenic 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr2.1:10872625-10872606 None:intergenic 40.0%
GACATCTCAAAATGCTCACT+TGG - chr2.1:10874849-10874868 None:intergenic 40.0%
GAGAAGGAACTGAAAGAAGA+TGG + chr2.1:10872125-10872144 MS.gene055823:intron 40.0%
GATACCAATGGCAAGGAATT+GGG + chr2.1:10875729-10875748 MS.gene055823:CDS 40.0%
GATGATACACATACCACCAT+AGG - chr2.1:10872272-10872291 None:intergenic 40.0%
GGACTTTCATCTGATTATGG+TGG + chr2.1:10874810-10874829 MS.gene055823:CDS 40.0%
GGCTTGAAATTCACAATGAG+TGG + chr2.1:10875616-10875635 MS.gene055823:CDS 40.0%
GTGGTTGCTGTAAAAGTGAA+GGG + chr2.1:10875691-10875710 MS.gene055823:CDS 40.0%
TAAAATGTGCCACATAAGGG+AGG + chr2.1:10872228-10872247 MS.gene055823:intron 40.0%
TCCATGTAAAACTATGGGCT+AGG + chr2.1:10874465-10874484 MS.gene055823:intron 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr2.1:10872605-10872624 MS.gene055823:intron 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr2.1:10872624-10872605 None:intergenic 40.0%
TCTTCTTTCAGTTCCTTCTC+TGG - chr2.1:10872125-10872144 None:intergenic 40.0%
TGAAGGGAACTAAAACTGGA+TGG + chr2.1:10875707-10875726 MS.gene055823:CDS 40.0%
TGAGAGACCCATCTTTATCT+TGG - chr2.1:10874050-10874069 None:intergenic 40.0%
TGCATGCTTGTACTAAAAGC+AGG - chr2.1:10873972-10873991 None:intergenic 40.0%
TGCTTTCTAACCAGGATTCA+AGG - chr2.1:10873766-10873785 None:intergenic 40.0%
TGGTTATGGAGACATACACA+AGG + chr2.1:10874623-10874642 MS.gene055823:CDS 40.0%
TGTCCTACTACGTAAATGAG+CGG + chr2.1:10874127-10874146 MS.gene055823:intron 40.0%
TTGATTACAGAAGGAGCTTG+TGG + chr2.1:10874603-10874622 MS.gene055823:intron 40.0%
TTTAGTACAAGCATGCAGCA+AGG + chr2.1:10873975-10873994 MS.gene055823:intron 40.0%
TTTATCTGCCCACAGTAGTT+GGG - chr2.1:10874200-10874219 None:intergenic 40.0%
! CAAGGACACTTTCTAGAGAA+AGG + chr2.1:10873711-10873730 MS.gene055823:intron 40.0%
! CCATGTAAAACTATGGGCTA+GGG + chr2.1:10874466-10874485 MS.gene055823:intron 40.0%
! CGCATTTTGCCGCAATATAA+AGG - chr2.1:10875366-10875385 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr2.1:10873334-10873353 None:intergenic 40.0%
! TAAAATTGCTGTTGCAGTCG+TGG + chr2.1:10875328-10875347 MS.gene055823:intron 40.0%
! TAGAGCTGTCAAAATGGGTT+AGG - chr2.1:10874506-10874525 None:intergenic 40.0%
! TTAGGCATCTGGCTTATACA+AGG + chr2.1:10875538-10875557 MS.gene055823:intron 40.0%
! TTTGAGGTTACCATCACAAG+TGG + chr2.1:10875799-10875818 MS.gene055823:CDS 40.0%
! TTTTATCTGCCCACAGTAGT+TGG - chr2.1:10874201-10874220 None:intergenic 40.0%
! TTTTCAGATTAACCGTGTCC+AGG - chr2.1:10874407-10874426 None:intergenic 40.0%
!! AAAAGTGTCCGTGGTTCATA+GGG + chr2.1:10874423-10874442 MS.gene055823:intron 40.0%
!! CATGTAAAACTATGGGCTAG+GGG + chr2.1:10874467-10874486 MS.gene055823:intron 40.0%
!! CCCATAGTTTTACATGGACT+AGG - chr2.1:10874463-10874482 None:intergenic 40.0%
!! GTTAATCTGAAAAGTGTCCG+TGG + chr2.1:10874414-10874433 MS.gene055823:intron 40.0%
!! TATATGTGTCGGTGTCATGT+TGG + chr2.1:10874356-10874375 MS.gene055823:intron 40.0%
!! TTCAACAAAGGGAGTACTTG+TGG + chr2.1:10874687-10874706 MS.gene055823:CDS 40.0%
!!! AAGTGTCCTTGTTTTTAGGC+GGG - chr2.1:10873702-10873721 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+CGG + chr2.1:10873472-10873491 MS.gene055823:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2.1:10873491-10873472 None:intergenic 40.0%
AACACAAGCCCTATGAACCA+CGG - chr2.1:10874434-10874453 None:intergenic 45.0%
ACAATGTTGCTCCTGCAAAC+TGG + chr2.1:10875839-10875858 MS.gene055823:CDS 45.0%
ACAGAAGGAGCTTGTGGTTA+TGG + chr2.1:10874609-10874628 MS.gene055823:intron 45.0%
ACAGGTTAGACCTTAGGGTT+TGG - chr2.1:10872325-10872344 None:intergenic 45.0%
ATACGGTTGCAATGCCGTTA+AGG + chr2.1:10875390-10875409 MS.gene055823:intron 45.0%
CAAGGAATTGGGGACAAAAC+TGG + chr2.1:10875740-10875759 MS.gene055823:CDS 45.0%
CTCACTGGGCTCTTCAAATT+CGG - chr2.1:10872046-10872065 None:intergenic 45.0%
CTTGAGTGACACTGTAGAAC+TGG - chr2.1:10873605-10873624 None:intergenic 45.0%
GATACACATACCACCATAGG+TGG - chr2.1:10872269-10872288 None:intergenic 45.0%
GATTATGGGATGCACAGTAC+TGG + chr2.1:10874648-10874667 MS.gene055823:CDS 45.0%
GCTGATGAGAAAGTTGTGCA+GGG + chr2.1:10875573-10875592 MS.gene055823:intron 45.0%
GGAACTGAAAGAAGATGGTG+AGG + chr2.1:10872130-10872149 MS.gene055823:intron 45.0%
GGATACCAATGGCAAGGAAT+TGG + chr2.1:10875728-10875747 MS.gene055823:CDS 45.0%
GGGCTTGGCTAAAGAATATG+TGG - chr2.1:10874180-10874199 None:intergenic 45.0%
GTAAATGAGCGGAATTGGCT+TGG + chr2.1:10874138-10874157 MS.gene055823:intron 45.0%
TAACGGCATTGCAACCGTAT+AGG - chr2.1:10875390-10875409 None:intergenic 45.0%
TAGGACACACTAGACCAAAG+TGG - chr2.1:10874114-10874133 None:intergenic 45.0%
TCCATTCCCGCCTAAAAACA+AGG + chr2.1:10873693-10873712 MS.gene055823:intron 45.0%
TGCTGATGAGAAAGTTGTGC+AGG + chr2.1:10875572-10875591 MS.gene055823:intron 45.0%
TGTCCAAATTGCCAGTTTGC+AGG - chr2.1:10875853-10875872 None:intergenic 45.0%
!! AATGGGTTAGGCCAGATGAA+CGG - chr2.1:10874494-10874513 None:intergenic 45.0%
!! CCCTAGCCCATAGTTTTACA+TGG - chr2.1:10874469-10874488 None:intergenic 45.0%
!! GAAAAGTGTCCGTGGTTCAT+AGG + chr2.1:10874422-10874441 MS.gene055823:intron 45.0%
!! GGCTTGGCCCATTTGTTATT+AGG + chr2.1:10874154-10874173 MS.gene055823:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2.1:10873490-10873471 None:intergenic 45.0%
!!! TCCTTGTTTTTAGGCGGGAA+TGG - chr2.1:10873697-10873716 None:intergenic 45.0%
ACTCCTACACCTCCCTTATG+TGG - chr2.1:10872240-10872259 None:intergenic 50.0%
AGAGAGAGTTCACGAGAGAC+GGG + chr2.1:10872079-10872098 MS.gene055823:intron 50.0%
AGCTCTTGAGTCTCAGTCTC+TGG - chr2.1:10872006-10872025 None:intergenic 50.0%
AGCTGTCAAATGAGCCGATC+CGG + chr2.1:10874087-10874106 MS.gene055823:intron 50.0%
AGGCAGAGGCTTGTAGTTGT+AGG - chr2.1:10873672-10873691 None:intergenic 50.0%
CACACTAGACCAAAGTGGAC+CGG - chr2.1:10874109-10874128 None:intergenic 50.0%
CAGAGAGAGTTCACGAGAGA+CGG + chr2.1:10872078-10872097 MS.gene055823:intron 50.0%
CAGCATGTTAGTGTCGTGTC+TGG - chr2.1:10874276-10874295 None:intergenic 50.0%
CTGGATGGATACCAATGGCA+AGG + chr2.1:10875722-10875741 MS.gene055823:CDS 50.0%
GCGGCAAAATGCGACCTATA+CGG + chr2.1:10875373-10875392 MS.gene055823:intron 50.0%
GCTCCTGCAAACTGGCAATT+TGG + chr2.1:10875847-10875866 MS.gene055823:CDS 50.0%
GGCAGAGGCTTGTAGTTGTA+GGG - chr2.1:10873671-10873690 None:intergenic 50.0%
GGGCTCTTCAAATTCGGCTA+CGG - chr2.1:10872040-10872059 None:intergenic 50.0%
TAGACCAAAGTGGACCGGAT+CGG - chr2.1:10874104-10874123 None:intergenic 50.0%
TAGCCAAGCCCAACTACTGT+GGG + chr2.1:10874189-10874208 MS.gene055823:intron 50.0%
TAGGAGTGGTATGCCACCTA+TGG + chr2.1:10872253-10872272 MS.gene055823:intron 50.0%
TGACACTGTAGAACTGGCAG+AGG - chr2.1:10873599-10873618 None:intergenic 50.0%
TGTAGGGTTGGATGGTGAAG+TGG + chr2.1:10875672-10875691 MS.gene055823:CDS 50.0%
TGTCCCCAATTCCTTGCCAT+TGG - chr2.1:10875736-10875755 None:intergenic 50.0%
TTAGCCAAGCCCAACTACTG+TGG + chr2.1:10874188-10874207 MS.gene055823:intron 50.0%
! ACATAAGGGAGGTGTAGGAG+TGG + chr2.1:10872239-10872258 MS.gene055823:intron 50.0%
!! ACCGGAGGGAGTACTAAACA+GGG - chr2.1:10872495-10872514 None:intergenic 50.0%
!! GTTTTTAGGCGGGAATGGAG+AGG - chr2.1:10873692-10873711 None:intergenic 50.0%
!! TGTCGGTGTCATGTTGGTGT+GGG + chr2.1:10874362-10874381 MS.gene055823:intron 50.0%
AAGAGCCCAGTGAGAGTGAG+GGG + chr2.1:10872052-10872071 MS.gene055823:intron 55.0%
ACGTGTCTGACACCTGGACA+CGG + chr2.1:10874392-10874411 MS.gene055823:intron 55.0%
AGACGGGAGGTGAATGGAGA+GGG + chr2.1:10872095-10872114 MS.gene055823:intron 55.0%
AGTCTCAGTCTCTGGCGCAA+TGG - chr2.1:10871998-10872017 None:intergenic 55.0%
CACAACACGTGTCTGACACC+TGG + chr2.1:10874386-10874405 MS.gene055823:intron 55.0%
CGTCTCTCGTGAACTCTCTC+TGG - chr2.1:10872080-10872099 None:intergenic 55.0%
CTTCAAATTCGGCTACGGCC+AGG - chr2.1:10872035-10872054 None:intergenic 55.0%
GAAGAGCCCAGTGAGAGTGA+GGG + chr2.1:10872051-10872070 MS.gene055823:intron 55.0%
GACTCAAGAGCTTCTGAGCC+TGG + chr2.1:10872014-10872033 MS.gene055823:CDS 55.0%
GAGTGGTATGCCACCTATGG+TGG + chr2.1:10872256-10872275 MS.gene055823:intron 55.0%
GCCCTGTTTAGTACTCCCTC+CGG + chr2.1:10872491-10872510 MS.gene055823:intron 55.0%
TGAAGAGCCCAGTGAGAGTG+AGG + chr2.1:10872050-10872069 MS.gene055823:intron 55.0%
TGGTACCCCTCACTCTCACT+GGG - chr2.1:10872060-10872079 None:intergenic 55.0%
! GTGCCACATAAGGGAGGTGT+AGG + chr2.1:10872234-10872253 MS.gene055823:intron 55.0%
!! GACCGGAGGGAGTACTAAAC+AGG - chr2.1:10872496-10872515 None:intergenic 55.0%
!! GTGTCGGTGTCATGTTGGTG+TGG + chr2.1:10874361-10874380 MS.gene055823:intron 55.0%
ACGGGAGGTGAATGGAGAGG+GGG + chr2.1:10872097-10872116 MS.gene055823:intron 60.0%
CACGAGAGACGGGAGGTGAA+TGG + chr2.1:10872089-10872108 MS.gene055823:intron 60.0%
CTCAGTCTCTGGCGCAATGG+AGG - chr2.1:10871995-10872014 None:intergenic 60.0%
CTGCCCACAGTAGTTGGGCT+TGG - chr2.1:10874195-10874214 None:intergenic 60.0%
CTGGTACCCCTCACTCTCAC+TGG - chr2.1:10872061-10872080 None:intergenic 60.0%
GACGGGAGGTGAATGGAGAG+GGG + chr2.1:10872096-10872115 MS.gene055823:intron 60.0%
GAGACGGGAGGTGAATGGAG+AGG + chr2.1:10872094-10872113 MS.gene055823:intron 60.0%
GAGAGTTCACGAGAGACGGG+AGG + chr2.1:10872082-10872101 MS.gene055823:intron 60.0%
TGAGCCGATCCGGTCCACTT+TGG + chr2.1:10874097-10874116 MS.gene055823:intron 60.0%
!! TGGAGAGGGGGTACCAGAGA+AGG + chr2.1:10872109-10872128 MS.gene055823:intron 60.0%
AGGCGGGAATGGAGAGGCAG+AGG - chr2.1:10873686-10873705 None:intergenic 65.0%
GGGCTAGGGGTCCGTTCATC+TGG + chr2.1:10874480-10874499 MS.gene055823:intron 65.0%
! TCTGGCGCAATGGAGGCGCG+AGG - chr2.1:10871988-10872007 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 10871982 10875897 10871982 ID=MS.gene055823
chr2.1 mRNA 10871982 10875897 10871982 ID=MS.gene055823.t1;Parent=MS.gene055823
chr2.1 exon 10871982 10872060 10871982 ID=MS.gene055823.t1.exon1;Parent=MS.gene055823.t1
chr2.1 CDS 10871982 10872060 10871982 ID=cds.MS.gene055823.t1;Parent=MS.gene055823.t1
chr2.1 exon 10874613 10874931 10874613 ID=MS.gene055823.t1.exon2;Parent=MS.gene055823.t1
chr2.1 CDS 10874613 10874931 10874613 ID=cds.MS.gene055823.t1;Parent=MS.gene055823.t1
chr2.1 exon 10875594 10875897 10875594 ID=MS.gene055823.t1.exon3;Parent=MS.gene055823.t1
chr2.1 CDS 10875594 10875897 10875594 ID=cds.MS.gene055823.t1;Parent=MS.gene055823.t1
Gene Sequence

>MS.gene055823

ATGCCTCGCGCCTCCATTGCGCCAGAGACTGAGACTCAAGAGCTTCTGAGCCTGGCCGTAGCCGAATTTGAAGAGCCCAGTGAGAGTGAGGGGTACCAGAGAGAGTTCACGAGAGACGGGAGGTGAATGGAGAGGGGGTACCAGAGAAGGAACTGAAAGAAGATGGTGAGGATTGTGAGAAAACAGAGAAAAAGAAGACAGAGAAAAGAAAGAAAGAGAAAGTGATGTCCCAAAATTTTTTATTAATAAAATGTGCCACATAAGGGAGGTGTAGGAGTGGTATGCCACCTATGGTGGTATGTGTATCATCACTCATATTATTGTAAGTACTTTTTTTCTTCCAAACCCTAAGGTCTAACCTGTAATGAGACACCATCTTATCATCTACATTCTACTGTATAAAACAAAAATCCATATAAATTAGAGTGGTTGAAAGTAGAGTAAAATATTTTTTTATTTCTTTTTATAAGCACTAGAAGTAAAATAGTCAAATGAACTATTTAATTAAGGCCCTGTTTAGTACTCCCTCCGGTCCTATTTATAAGAGAAAGTTGAGTCAACAAAAGTTTATGTATCTGGACTGAATTGTTAATCAAATACATCCATTTTTGTTGACCCAAATTTCTCTTATAAATAGGACCGGAGGAAGTATAAAATAATGGGTAACTAATAAGCTAATTTATAACATATGAACTCATAACAAATGATTTATAAGTTAATTTATAGTTGATAATGCGTTAGTTGATTGAATTTGCAGTATTTAATAAAATTAATAGTTGAAATATATAAGTATGCAATAACATAAAGAGGTAATTTAATTAATATTTATTTATTCAATTAATATTGCAGAGATGAAATTGAGGTAAAAGTGATAAGCTACAACTATAAGCCTAATGAATAAGCTTATCAAAAAACACTATAAGTTCCTAAATTAAACTATAAACTTGTGTGAAAAATACGATTATCAAACAAATCTTTTTTAATCATAAAAACTTTATACTCCTTCTAGTCACATTTATAAGTAAAAAACAACTCTTTAAGTGCATTGAATAACTGATGTATTTGACATATAAATGTGATTACATACATTATTTATTCAATATACCTAAAATGTTTGTTTTTTACTTATAAATGTGACCGGAGGGAGTAAGATATAAACTCAAAGAGATCATTGCTTAAAAAATTAAACAAATGTTGTTCTGGTAATTTAAAGTCAAACATAATTAATAAAGATAAATATTACTCCCTCCGTTTCAAAATGAGTGTCGCTTTAGCCAAAAAAATTTGTTTCAAAATGAATGTCGCTTTCAGTTTCCAATGCAATAATAACTTTTTCTTTTCAATTGTACCCTCCAATTAATACTCTGCACACTACTTCCAAAGTATTACTTTTAAAACTAACCAATAGTTAATAAGGATAATTTGGTAAAATAATCATTCTCTTTCTTTTAATCATTACATTTCTTAATATGTGTGTAAACACCTAAAACGACACTCATTTTGAAACGGACGGAGTACAAATGAAAATTTATGATGAGACAGTAGCAATTAATGAAGAAACAGTTTTAGCAATCAAGTTTTCACATTGAGGAGTCAGTCTTCTGTGACTGACTGCCTCTGCCAGTTCTACAGTGTCACTCAAGTCACTACAAAACAAACCATCAAATAATTCTTTCTAAAACAGTGCCCTACAACTACAAGCCTCTGCCTCTCCATTCCCGCCTAAAAACAAGGACACTTTCTAGAGAAAGGACAAAGGCAAACTAAGTTACAAACTAGAACCTTGAATCCTGGTTAGAAAGCAAAAAAACATGGGTTCAAAATGTCAAAGTTTCTATCTTTTTGTTTATCAATGAAATATACATCATTTTCAGTTATAAAAAGAAGGGTTTTTTTTCCCTTGTTTAGTGTTAATTGTTTCCACTAGAAAGAAGAAAAAAAACAACTTTTTATTTCAAATGGGTGTTCTACAATCTACATTTCTCTACCTGCTTTTAGTACAAGCATGCAGCAAGGTTGCTTCTTACACAGATGAAGAATGGAAGTCTGCAACTGCAACATACATCCAAGATAAAGATGGGTCTCTCATTACAGGTATTTCTTAGAGCTGTCAAATGAGCCGATCCGGTCCACTTTGGTCTAGTGTGTCCTACTACGTAAATGAGCGGAATTGGCTTGGCCCATTTGTTATTAGGCCACATATTCTTTAGCCAAGCCCAACTACTGTGGGCAGATAAAAAGGCCCAATCGTTTTAGGCTTGTACTGTGAAGCACAAATACGGACACAGACACCAGACACGACACTAACATGCTGACACTGTTATTTGAGAAAATTACAAAATTCAATTGAGAAAATCACAAAATTCAGTGTAATTATATGTGTCGGTGTCATGTTGGTGTGGGACACAACACGTGTCTGACACCTGGACACGGTTAATCTGAAAAGTGTCCGTGGTTCATAGGGCTTGTGTTTTACAACCTAGTCCATGTAAAACTATGGGCTAGGGGTCCGTTCATCTGGCCTAACCCATTTTGACAGCTCTAATATTTTTGCACTCAAAAGTTTAAGTAAGTTGGGTTTCGGGACTCACCAGTTTTAGTTCTGACAATGTGGTTGTGAATTGATTACAGAAGGAGCTTGTGGTTATGGAGACATACACAAGGTTGATTATGGGATGCACAGTACTGGGTTAAGCACAATTTTGTTCAACAAAGGGAGTACTTGTGGTGCTTGTTATGAGATTAGATGTGTTGATCACATCTTATGGTGCTTGATTGGAAGTCCTTCTGTAGTTGTTACTGTTACAGATTTCTGTGCTCCAAATTATGGACTTTCATCTGATTATGGTGGATGGTGTAATTTTCCAAGTGAGCATTTTGAGATGTCAGAAGCTGCATTTGCTGAAATTGCCAAGAGAAAATCTGATATAGTGCCAATTCAATATAGAAGGTAAAATACATTGTATAGGATAGTTTATAAAACAACTTATAGCTTATGAAAACAACTTGACTTTATTTTATTTTACGATATAGAAATAGCTTATAATAAGTACTCCCTCCGTCTCTAAATAATAGTCGTTTAAGTTTTATGCACGATTATTAAGGAAATGATTAATTGTGTTGATTTTGATGGTAAAATTAGTGTCATTTACTAAAACACCCTTATTAATTGTAGTTAGTGGAGTAGTTAAGTTGGATGAAATTTAATAAATAAGGGTATAATAATGGAAAAAAATAATAAATACTGCATTGATATTCTAAAGTGACAATTATTTTGAAAAAAAGAAAAATGGGTAAAGAGACAATTATTGTGAGATGGAGGGAGTACTTATATGATAAAAATATTTAAAATTGCTGTTGCAGTCGTGGTTAAGTCGCGAACCTTTATATTGCGGCAAAATGCGACCTATACGGTTGCAATGCCGTTAAGGATACATCAAAATTCTTTTTTATTGGGGCTGCCAATTTAAAACTATAAGCGCATATGTTATAAACTTATAAGTGCTCAATAAAGCTGTTTACTTTATCCAAACAGGGCTTAAGTCTTTTTTAATGCTTAGGCATCTGGCTTATACAAGGAGTTTTTTTTTTGCTGATGAGAAAGTTGTGCAGGGTTAAATGCAAAAGAACTGGTGGCTTGAAATTCACAATGAGTGGAAGTGATCATTTCTATCAGGTTCTTATTACAAATGTAGGGTTGGATGGTGAAGTGGTTGCTGTAAAAGTGAAGGGAACTAAAACTGGATGGATACCAATGGCAAGGAATTGGGGACAAAACTGGCATTGCAATGCGAATCTTAAAAAACAACCTCTATCCTTTGAGGTTACCATCACAAGTGGAAAAACAATCACATCTTACAATGTTGCTCCTGCAAACTGGCAATTTGGACAAACATTTGAAGGAAAACAATTCTAG
Protein sequence

>MS.gene055823.t1

MPRASIAPETETQELLSLAVAEFEEPKGACGYGDIHKVDYGMHSTGLSTILFNKGSTCGACYEIRCVDHILWCLIGSPSVVVTVTDFCAPNYGLSSDYGGWCNFPSEHFEMSEAAFAEIAKRKSDIVPIQYRRVKCKRTGGLKFTMSGSDHFYQVLITNVGLDGEVVAVKVKGTKTGWIPMARNWGQNWHCNANLKKQPLSFEVTITSGKTITSYNVAPANWQFGQTFEGKQF