AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26170.t1 MTR_5g076950 96.654 269 6 1 1 269 1 266 0.0 540
MS.gene26170.t1 MTR_3g064510 64.643 280 86 5 1 267 5 284 1.01e-128 367
MS.gene26170.t1 MTR_0040s0140 60.177 226 89 1 43 267 31 256 8.40e-98 287
MS.gene26170.t1 MTR_2g090255 56.897 232 99 1 37 267 21 252 4.92e-96 282
MS.gene26170.t1 MTR_5g079950 50.187 267 117 2 2 267 6 257 2.97e-91 271
MS.gene26170.t1 MTR_5g041700 56.250 224 97 1 44 267 25 247 8.05e-90 266
MS.gene26170.t1 MTR_4g081950 55.804 224 98 1 44 267 61 283 3.19e-89 266
MS.gene26170.t1 MTR_7g061720 50.988 253 119 2 16 267 8 256 9.82e-89 264
MS.gene26170.t1 MTR_3g435430 55.804 224 98 1 44 267 25 247 2.12e-88 263
MS.gene26170.t1 MTR_3g094060 53.571 224 103 1 44 267 31 253 1.03e-87 261
MS.gene26170.t1 MTR_5g075320 54.386 228 103 1 40 267 25 251 1.65e-87 261
MS.gene26170.t1 MTR_3g094040 53.571 224 103 1 44 267 31 253 3.36e-87 260
MS.gene26170.t1 MTR_2g097030 54.667 225 101 1 44 267 34 258 4.37e-87 260
MS.gene26170.t1 MTR_3g466790 55.357 224 99 1 44 267 32 254 5.14e-87 259
MS.gene26170.t1 MTR_3g466760 52.790 233 109 1 35 267 29 260 1.19e-85 256
MS.gene26170.t1 MTR_7g011060 52.863 227 98 2 43 269 25 242 1.84e-85 255
MS.gene26170.t1 MTR_4g063975 55.310 226 100 1 43 267 31 256 3.76e-81 245
MS.gene26170.t1 MTR_7g013140 52.679 224 103 2 43 265 27 248 3.06e-80 242
MS.gene26170.t1 MTR_7g013150 51.786 224 105 2 43 265 29 250 6.76e-80 241
MS.gene26170.t1 MTR_8g058990 51.101 227 108 2 39 264 25 249 1.68e-78 238
MS.gene26170.t1 MTR_1g026020 50.000 224 110 1 44 265 29 252 4.33e-78 237
MS.gene26170.t1 MTR_1g085460 50.667 225 108 2 44 265 30 254 6.29e-77 234
MS.gene26170.t1 MTR_8g464350 50.220 227 110 2 38 263 25 249 7.50e-77 234
MS.gene26170.t1 MTR_4g124340 43.066 274 144 5 3 266 12 283 1.63e-75 231
MS.gene26170.t1 MTR_7g013120 51.327 226 106 3 43 266 28 251 2.36e-75 230
MS.gene26170.t1 MTR_6g012520 52.655 226 98 2 44 269 28 244 2.75e-74 227
MS.gene26170.t1 MTR_7g111010 48.444 225 109 3 44 263 27 249 6.92e-72 221
MS.gene26170.t1 MTR_7g110990 48.444 225 109 3 44 263 12 234 8.27e-72 220
MS.gene26170.t1 MTR_5g011210 45.333 225 122 1 42 265 35 259 1.68e-66 207
MS.gene26170.t1 MTR_4g102450 45.852 229 119 2 36 263 32 256 1.31e-63 200
MS.gene26170.t1 MTR_6g012500 47.244 127 66 1 144 269 156 282 3.00e-36 130
MS.gene26170.t1 MTR_0008s0120 35.841 226 88 5 39 264 27 195 5.09e-36 127
MS.gene26170.t1 MTR_2g090270 28.390 236 144 7 42 265 33 255 2.98e-23 95.9
MS.gene26170.t1 MTR_2g090265 29.362 235 141 8 43 265 32 253 4.18e-22 92.8
MS.gene26170.t1 MTR_0122s0020 30.213 235 139 8 43 265 40 261 4.44e-22 92.8
MS.gene26170.t1 MTR_4g028640 30.833 240 124 11 44 263 42 259 1.25e-21 91.7
MS.gene26170.t1 MTR_0118s0070 29.565 230 133 11 49 262 53 269 3.28e-18 82.4
MS.gene26170.t1 MTR_0809s0010 28.755 233 147 10 40 263 43 265 1.61e-17 80.5
MS.gene26170.t1 MTR_4g075790 26.724 232 136 9 47 263 26 238 4.02e-13 67.8
MS.gene26170.t1 MTR_1g085365 52.632 57 27 0 211 267 3 59 1.48e-12 61.6
MS.gene26170.t1 MTR_5g013440 27.273 231 149 10 47 268 32 252 1.08e-11 63.5
MS.gene26170.t1 MTR_0122s0020 29.775 178 101 7 43 209 40 204 5.37e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26170.t1 AT3G03220 84.071 226 36 0 43 268 39 264 1.97e-146 410
MS.gene26170.t1 AT5G56320 57.589 224 94 1 44 267 29 251 7.84e-93 275
MS.gene26170.t1 AT5G56320 57.589 224 94 1 44 267 29 251 7.84e-93 275
MS.gene26170.t1 AT5G56320 57.589 224 94 1 44 267 29 251 2.29e-92 275
MS.gene26170.t1 AT3G55500 51.119 268 115 2 1 267 6 258 3.32e-92 273
MS.gene26170.t1 AT5G05290 57.778 225 93 2 44 267 32 255 6.95e-91 270
MS.gene26170.t1 AT2G37640 56.444 225 97 1 44 267 36 260 3.11e-90 268
MS.gene26170.t1 AT5G02260 54.667 225 101 1 44 267 32 256 4.12e-90 268
MS.gene26170.t1 AT2G39700 56.000 225 98 1 44 267 31 255 2.31e-89 266
MS.gene26170.t1 AT1G69530 50.187 267 115 3 1 267 1 249 4.29e-89 265
MS.gene26170.t1 AT1G69530 50.187 267 115 3 1 267 1 249 4.29e-89 265
MS.gene26170.t1 AT3G29030 54.867 226 94 1 44 269 38 255 2.00e-88 263
MS.gene26170.t1 AT2G03090 56.250 224 97 1 44 267 30 252 3.60e-88 263
MS.gene26170.t1 AT1G69530 50.382 262 112 3 1 262 1 244 3.97e-87 261
MS.gene26170.t1 AT2G40610 52.889 225 104 2 44 267 30 253 2.32e-85 255
MS.gene26170.t1 AT2G37640 57.692 208 87 1 61 267 28 235 1.24e-84 253
MS.gene26170.t1 AT1G26770 54.911 224 100 1 44 267 26 248 5.41e-84 252
MS.gene26170.t1 AT1G26770 54.911 224 100 1 44 267 36 258 8.73e-84 251
MS.gene26170.t1 AT5G39270 51.261 238 113 2 28 265 42 276 2.19e-81 246
MS.gene26170.t1 AT2G28950 53.333 225 104 1 44 267 31 255 9.43e-81 244
MS.gene26170.t1 AT5G39290 51.931 233 106 3 33 265 50 276 1.12e-80 244
MS.gene26170.t1 AT5G39280 52.232 224 104 2 42 265 52 272 1.69e-79 241
MS.gene26170.t1 AT4G38210 51.754 228 107 2 43 267 27 254 2.22e-79 240
MS.gene26170.t1 AT5G39300 52.679 224 103 2 42 265 53 273 2.34e-79 241
MS.gene26170.t1 AT1G20190 49.545 220 109 1 46 263 28 247 2.47e-76 233
MS.gene26170.t1 AT1G62980 48.444 225 115 1 42 265 29 253 2.57e-72 222
MS.gene26170.t1 AT1G69530 44.569 267 100 4 1 267 1 219 6.46e-72 220
MS.gene26170.t1 AT4G01630 48.430 223 112 2 44 263 28 250 2.88e-71 219
MS.gene26170.t1 AT1G69530 44.656 262 97 4 1 262 1 214 3.63e-70 216
MS.gene26170.t1 AT5G39310 45.306 245 130 3 22 265 68 309 4.20e-69 216
MS.gene26170.t1 AT1G12560 46.606 221 116 2 44 263 37 256 3.51e-68 212
MS.gene26170.t1 AT5G39260 48.444 225 107 3 42 265 43 259 3.65e-66 207
MS.gene26170.t1 AT1G20190 48.663 187 94 1 79 263 2 188 7.57e-63 196
MS.gene26170.t1 AT3G15370 46.983 232 108 6 44 267 27 251 5.98e-62 196
MS.gene26170.t1 AT3G15370 47.442 215 98 6 61 267 74 281 3.28e-57 184
MS.gene26170.t1 AT2G20750 31.250 256 150 9 25 265 20 264 2.43e-24 99.0
MS.gene26170.t1 AT4G28250 29.889 271 160 10 9 265 3 257 6.79e-24 97.8
MS.gene26170.t1 AT4G28250 29.630 270 156 10 9 265 3 251 1.24e-21 91.3
MS.gene26170.t1 AT1G65680 28.452 239 143 9 40 263 43 268 7.23e-19 84.3
MS.gene26170.t1 AT2G20750 30.412 194 113 6 25 206 20 203 8.49e-15 72.0
MS.gene26170.t1 AT4G17030 26.778 239 137 9 43 263 26 244 4.27e-13 67.8
MS.gene26170.t1 AT4G28250 29.327 208 117 8 9 206 3 190 8.25e-11 60.5
MS.gene26170.t1 AT3G60570 24.424 217 137 7 62 265 4 206 8.44e-11 60.8
MS.gene26170.t1 AT4G28250 28.910 211 120 8 9 209 3 193 8.46e-11 60.5

Find 83 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCTGTGCGCCGAATTA+TGG 0.120138 5.4:+57445195 MS.gene26170:CDS
GGCTTTCAATGGGTCGGAAT+TGG 0.242564 5.4:+57447574 MS.gene26170:CDS
GCTTTCAATGGGTCGGAATT+GGG 0.256772 5.4:+57447575 MS.gene26170:CDS
GGAAGAACAAAGTGCTTATT+AGG 0.266775 5.4:-57445252 None:intergenic
TTGTCCAAAACTCCAGTCTT+TGG 0.295901 5.4:-57447697 None:intergenic
GCTCCCAAAGACTGGAGTTT+TGG 0.308877 5.4:+57447693 MS.gene26170:CDS
ATTTCTGTGCGCCGAATTAT+GGG 0.321870 5.4:+57445196 MS.gene26170:CDS
ACGCGTTTATATGCCAGTTT+TGG 0.342695 5.4:-57447599 None:intergenic
CATTGTTGCGGTGAAGGTTA+AGG 0.343774 5.4:+57447536 MS.gene26170:CDS
TGTCCAAAACTCCAGTCTTT+GGG 0.365496 5.4:-57447696 None:intergenic
TACGGTGTGTGGATGATTTA+CGG 0.369841 5.4:+57445133 MS.gene26170:CDS
GTCGGAATTGGGGCCAAAAC+TGG 0.376301 5.4:+57447586 MS.gene26170:CDS
GATTTACGGTGGTGTATTCC+TGG 0.376424 5.4:+57445147 MS.gene26170:CDS
TGCGCCGAATTATGGGTTTA+CGG 0.384118 5.4:+57445203 MS.gene26170:CDS
AAGAACAGGTTGGCTTTCAA+TGG 0.397007 5.4:+57447563 MS.gene26170:CDS
GAATCAACCTCTTTCATTTG+AGG 0.401927 5.4:+57447629 MS.gene26170:CDS
AACAGTTGCCATGCCGTAAC+CGG 0.402191 5.4:-57445055 None:intergenic
GTGGCGCGTGCTTTGAATTA+CGG 0.402202 5.4:+57445115 MS.gene26170:CDS
AATTATGGGTTTACGGTTGA+AGG 0.412698 5.4:+57445210 MS.gene26170:CDS
ATTGTTGCGGTGAAGGTTAA+GGG 0.417256 5.4:+57447537 MS.gene26170:CDS
CGATTTACAGTCACCGGATC+TGG 0.430139 5.4:+57447468 MS.gene26170:CDS
GACTTATCAAAAGCCGGTTA+CGG 0.433896 5.4:+57445042 MS.gene26170:CDS
ATCAAATTGCTTGCCTTCAA+AGG 0.451831 5.4:-57447721 None:intergenic
ACTGTGTCACGTGGATCTAC+CGG 0.453305 5.4:-57444997 None:intergenic
GTCGGCGGCGCGTGTGGCTA+CGG 0.454653 5.4:+57445018 MS.gene26170:CDS
GTGCTGATCAGCAATGTTGC+TGG 0.456538 5.4:+57447504 MS.gene26170:CDS
CAGATCCGGTGACTGTAAAT+CGG 0.457752 5.4:-57447467 None:intergenic
GTAACAATAATCGAAGTTCC+AGG 0.466240 5.4:-57445165 None:intergenic
AAGATCGCTATTTGGAAAGC+TGG 0.469148 5.4:+57445291 MS.gene26170:CDS
GGGTTTACGGTTGAAGGTGG+TGG 0.469331 5.4:+57445216 MS.gene26170:CDS
CTTTCAATGGGTCGGAATTG+GGG 0.469604 5.4:+57447576 MS.gene26170:CDS
AAGGTTAAGGGCTCAAGAAC+AGG 0.472972 5.4:+57447549 MS.gene26170:CDS
ATCAGCAATGTTGCTGGCCA+TGG 0.474378 5.4:+57447510 MS.gene26170:CDS
GGCGCGTGCGGATCGCCATT+CGG 0.481496 5.4:-57444962 None:intergenic
CTTCCCCTTCTTTCACCGAA+TGG 0.483052 5.4:+57444947 MS.gene26170:CDS
ATCTTCTCAAAAGCATCAAT+AGG 0.486912 5.4:-57445273 None:intergenic
ACAATGTTGCTCCCAAAGAC+TGG 0.490580 5.4:+57447685 MS.gene26170:CDS
AGAACAGGTTGGCTTTCAAT+GGG 0.491999 5.4:+57447564 MS.gene26170:CDS
TGGAGACATTGTTGCGGTGA+AGG 0.493493 5.4:+57447530 MS.gene26170:CDS
TGGATCTACCGGGGCGTAGT+AGG 0.498940 5.4:-57444986 None:intergenic
TTTGAGGTTACGAGTAGTGA+TGG 0.501425 5.4:+57447645 MS.gene26170:CDS
CTCGTAACCTCAAATGAAAG+AGG 0.502745 5.4:-57447636 None:intergenic
GATCGCCATTCGGTGAAAGA+AGG 0.504459 5.4:-57444952 None:intergenic
TCAACCGTAAACCCATAATT+CGG 0.504889 5.4:-57445207 None:intergenic
AGAAGAGTAGTGAGATGTAA+CGG 0.505253 5.4:-57444893 None:intergenic
TGAAATGAATATACCAGATC+CGG 0.506633 5.4:-57447481 None:intergenic
GGGGAAGATTGTTGAGAAGG+TGG 0.507413 5.4:-57444931 None:intergenic
AGAAGGTGGTGGTTGAGAAG+AGG 0.512505 5.4:-57444917 None:intergenic
GAAGGGGAAGATTGTTGAGA+AGG 0.515350 5.4:-57444934 None:intergenic
CTGTGTCACGTGGATCTACC+GGG 0.516254 5.4:-57444996 None:intergenic
AGGATAAAGTGCAGAAGGGA+AGG 0.530862 5.4:+57447438 MS.gene26170:intron
TATGGGTTTACGGTTGAAGG+TGG 0.532788 5.4:+57445213 MS.gene26170:CDS
ATCGCCATTCGGTGAAAGAA+GGG 0.538930 5.4:-57444951 None:intergenic
GACACAGTCGGCGGCGCGTG+TGG 0.550703 5.4:+57445012 MS.gene26170:CDS
CAGGTTGGCTTTCAATGGGT+CGG 0.553172 5.4:+57447568 MS.gene26170:CDS
TACGGAGACTTATCAAAAGC+CGG 0.565953 5.4:+57445036 MS.gene26170:CDS
GGAGCAGGATAAAGTGCAGA+AGG 0.570200 5.4:+57447433 MS.gene26170:intron
GGAGTCCGATTTACAGTCAC+CGG 0.573922 5.4:+57447462 MS.gene26170:CDS
ATAAAGTGCAGAAGGGAAGG+TGG 0.575254 5.4:+57447441 MS.gene26170:CDS
AGAACAAAGTGCTTATTAGG+AGG 0.582144 5.4:-57445249 None:intergenic
TTGAGGTTACGAGTAGTGAT+GGG 0.583484 5.4:+57447646 MS.gene26170:CDS
TTTGAACGAGGTCAGATCTG+TGG 0.583854 5.4:+57445096 MS.gene26170:CDS
ATCAAAAGCCGGTTACGGCA+TGG 0.595697 5.4:+57445047 MS.gene26170:CDS
ACATGCCTCTTCAGTATCGT+AGG 0.598128 5.4:+57445316 MS.gene26170:CDS
ATCTACCGGGGCGTAGTAGG+TGG 0.607583 5.4:-57444983 None:intergenic
GGTTACGGCATGGCAACTGT+TGG 0.609475 5.4:+57445057 MS.gene26170:CDS
GAAGATTGTTGAGAAGGTGG+TGG 0.611367 5.4:-57444928 None:intergenic
GGCGTAGTAGGTGGCGCGTG+CGG 0.613506 5.4:-57444974 None:intergenic
TCACCGCAACAATGTCTCCA+TGG 0.621449 5.4:-57447527 None:intergenic
TTAAGGGCTCAAGAACAGGT+TGG 0.623161 5.4:+57447553 MS.gene26170:CDS
TATTACCTACGATACTGAAG+AGG 0.624697 5.4:-57445321 None:intergenic
GCGCCGCCGACTGTGTCACG+TGG 0.625743 5.4:-57445006 None:intergenic
TCGCCATTCGGTGAAAGAAG+GGG 0.643549 5.4:-57444950 None:intergenic
GAGCAGGATAAAGTGCAGAA+GGG 0.649937 5.4:+57447434 MS.gene26170:intron
GTGCTTTGAATTACGGTGTG+TGG 0.652130 5.4:+57445122 MS.gene26170:CDS
AGTGAAGCTTTGTTTGAACG+AGG 0.664292 5.4:+57445084 MS.gene26170:CDS
TAGTGATGGGAAAACAGTCA+CGG 0.670779 5.4:+57447659 MS.gene26170:CDS
ACGCGCCACCTACTACGCCC+CGG 0.682530 5.4:+57444978 MS.gene26170:CDS
GTAGATCCACGTGACACAGT+CGG 0.684257 5.4:+57445000 MS.gene26170:CDS
TGGCCATGGAGACATTGTTG+CGG 0.694232 5.4:+57447524 MS.gene26170:CDS
TGTGTCACGTGGATCTACCG+GGG 0.729868 5.4:-57444995 None:intergenic
GATCCACGTGACACAGTCGG+CGG 0.742025 5.4:+57445003 MS.gene26170:CDS
GGTGTGTGGATGATTTACGG+TGG 0.782133 5.4:+57445136 MS.gene26170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAAAATTGTATTTGA+GGG - chr5.4:57446697-57446716 None:intergenic 15.0%
!!! TACTTAAAAAAACTTGATTT+TGG + chr5.4:57447376-57447395 MS.gene26170:intron 15.0%
!! AATACAAAATCCCATTAATT+TGG - chr5.4:57446723-57446742 None:intergenic 20.0%
!! ATACAAAATCCCATTAATTT+GGG - chr5.4:57446722-57446741 None:intergenic 20.0%
!! ATTAACATTGTATGAAGATA+CGG - chr5.4:57447025-57447044 None:intergenic 20.0%
!! GAAAAAAATATTAAGCTTGT+TGG + chr5.4:57445802-57445821 MS.gene26170:intron 20.0%
!! GAAATCAAAAATTGTATTTG+AGG - chr5.4:57446698-57446717 None:intergenic 20.0%
!! TACTAATTGAATTCTATGTA+TGG - chr5.4:57446998-57447017 None:intergenic 20.0%
!!! TGTTAATGGTTAATTTGTTA+GGG + chr5.4:57446242-57446261 MS.gene26170:intron 20.0%
!!! TTATTAGACCATTAATTTTG+CGG - chr5.4:57447198-57447217 None:intergenic 20.0%
!!! TTGTTAATGGTTAATTTGTT+AGG + chr5.4:57446241-57446260 MS.gene26170:intron 20.0%
! AACAAATCCTAAAGGAAAAT+AGG + chr5.4:57446858-57446877 MS.gene26170:intron 25.0%
! AACACAAATTCCATTAAACT+TGG - chr5.4:57446175-57446194 None:intergenic 25.0%
! AATGAAATTCAAGTAGCAAA+GGG + chr5.4:57446438-57446457 MS.gene26170:intron 25.0%
! ACACAAATTCCATTAAACTT+GGG - chr5.4:57446174-57446193 None:intergenic 25.0%
! ATATTAATGGTGGTAAAACT+TGG + chr5.4:57445622-57445641 MS.gene26170:intron 25.0%
! ATTACTAAAACTACCATTCA+AGG - chr5.4:57445986-57446005 None:intergenic 25.0%
! GTATCTTCATACAATGTTAA+TGG + chr5.4:57447024-57447043 MS.gene26170:intron 25.0%
! TAATGAAATTCAAGTAGCAA+AGG + chr5.4:57446437-57446456 MS.gene26170:intron 25.0%
! TCTATGTATGGAAAAATGTT+GGG - chr5.4:57446986-57447005 None:intergenic 25.0%
! TTCTATGTATGGAAAAATGT+TGG - chr5.4:57446987-57447006 None:intergenic 25.0%
! TTTAATAGCATACTTGAGTT+TGG + chr5.4:57445731-57445750 MS.gene26170:intron 25.0%
! TTTGAATGTTGTGTTATGTT+TGG + chr5.4:57447412-57447431 MS.gene26170:intron 25.0%
!! AAAATTGTATTTGAGGGTTT+TGG - chr5.4:57446691-57446710 None:intergenic 25.0%
!! AAATTGTATTTGAGGGTTTT+GGG - chr5.4:57446690-57446709 None:intergenic 25.0%
!! TACAAAATCCCATTAATTTG+GGG - chr5.4:57446721-57446740 None:intergenic 25.0%
!!! ATTAAGCTTGTTGGATTATA+TGG + chr5.4:57445811-57445830 MS.gene26170:intron 25.0%
!!! GAATGGTAGTTTTAGTAATA+AGG + chr5.4:57445987-57446006 MS.gene26170:intron 25.0%
!!! GGTTATTTCTATTTTTCCTA+TGG + chr5.4:57445768-57445787 MS.gene26170:intron 25.0%
!!! GTTAATGGTTAATTTGTTAG+GGG + chr5.4:57446243-57446262 MS.gene26170:intron 25.0%
!!! TTAATGGTTAATTTGTTAGG+GGG + chr5.4:57446244-57446263 MS.gene26170:intron 25.0%
!!! TTTTCAAGAAGATATTCCAT+AGG - chr5.4:57445787-57445806 None:intergenic 25.0%
AATTCCTGTAGTTAATGAGA+AGG + chr5.4:57447063-57447082 MS.gene26170:intron 30.0%
ACTTGAATTTCATTAGCACT+AGG - chr5.4:57446432-57446451 None:intergenic 30.0%
AGAAAAGACCGCAAAATTAA+TGG + chr5.4:57447187-57447206 MS.gene26170:intron 30.0%
AGAGTTTATCCCAAGTTTAA+TGG + chr5.4:57446162-57446181 MS.gene26170:intron 30.0%
ATGCTTACAAACGAAGTTAT+AGG + chr5.4:57445858-57445877 MS.gene26170:intron 30.0%
ATTCCTGTAGTTAATGAGAA+GGG + chr5.4:57447064-57447083 MS.gene26170:intron 30.0%
CTTTATGCATAATGCTCATT+TGG + chr5.4:57446293-57446312 MS.gene26170:intron 30.0%
GCTGAGAAACAAATTGTTAA+TGG + chr5.4:57446228-57446247 MS.gene26170:intron 30.0%
TATGCTACATCATTTACTGT+CGG + chr5.4:57447323-57447342 MS.gene26170:intron 30.0%
TGAAATGAATATACCAGATC+CGG - chr5.4:57447484-57447503 None:intergenic 30.0%
TTGATTTCCCCCAAATTAAT+GGG + chr5.4:57446710-57446729 MS.gene26170:intron 30.0%
! AATTGTATTTGAGGGTTTTG+GGG - chr5.4:57446689-57446708 None:intergenic 30.0%
! ACAAAATCCCATTAATTTGG+GGG - chr5.4:57446720-57446739 None:intergenic 30.0%
! ATATTTTGCTCCATTATGAG+TGG + chr5.4:57446922-57446941 MS.gene26170:intron 30.0%
! ATTTTGCTAGCAAGTACATT+AGG + chr5.4:57447104-57447123 MS.gene26170:intron 30.0%
! CTACTATCCTATTTTCCTTT+AGG - chr5.4:57446868-57446887 None:intergenic 30.0%
! TGGAATTTGTGTTTTGTCAT+TGG + chr5.4:57446182-57446201 MS.gene26170:intron 30.0%
! TTGTTTGAAGTGATTGTTGA+TGG + chr5.4:57445430-57445449 MS.gene26170:intron 30.0%
! TTTGATTTCCCCCAAATTAA+TGG + chr5.4:57446709-57446728 MS.gene26170:intron 30.0%
! TTTTGCTAGCAAGTACATTA+GGG + chr5.4:57447105-57447124 MS.gene26170:intron 30.0%
!! AGTTTGGCTTGTTTATGAAT+TGG + chr5.4:57445747-57445766 MS.gene26170:intron 30.0%
!! ATCTTCTCAAAAGCATCAAT+AGG - chr5.4:57445276-57445295 None:intergenic 30.0%
!! TTTGTCATTGGCTTCTTAAT+TGG + chr5.4:57446194-57446213 MS.gene26170:intron 30.0%
AACTCGCAAACAAATCCTAA+AGG + chr5.4:57446850-57446869 MS.gene26170:intron 35.0%
AATTATGGGTTTACGGTTGA+AGG + chr5.4:57445210-57445229 MS.gene26170:CDS 35.0%
ACAGAGCTTCATATTAATGG+TGG + chr5.4:57445612-57445631 MS.gene26170:intron 35.0%
AGAAGAGTAGTGAGATGTAA+CGG - chr5.4:57444896-57444915 None:intergenic 35.0%
AGCTACATTGAAACCTTGAA+TGG + chr5.4:57445970-57445989 MS.gene26170:intron 35.0%
ATAGCTGATAAAGGAACTTG+TGG + chr5.4:57447265-57447284 MS.gene26170:intron 35.0%
ATCAAATTGCTTGCCTTCAA+AGG - chr5.4:57447724-57447743 None:intergenic 35.0%
CGAAGTTATAGGAGTAAGTT+AGG + chr5.4:57445869-57445888 MS.gene26170:intron 35.0%
CTATTAACCCACGGTTTAAA+TGG - chr5.4:57447239-57447258 None:intergenic 35.0%
GAATCAACCTCTTTCATTTG+AGG + chr5.4:57447629-57447648 MS.gene26170:CDS 35.0%
GAATTTCATTAGCACTAGGA+AGG - chr5.4:57446428-57446447 None:intergenic 35.0%
GCATAAAGTTCCAAAGAGAA+AGG - chr5.4:57446362-57446381 None:intergenic 35.0%
GCTACAGAGCTTCATATTAA+TGG + chr5.4:57445609-57445628 MS.gene26170:intron 35.0%
GTAACAATAATCGAAGTTCC+AGG - chr5.4:57445168-57445187 None:intergenic 35.0%
TATTACCTACGATACTGAAG+AGG - chr5.4:57445324-57445343 None:intergenic 35.0%
TCAACCGTAAACCCATAATT+CGG - chr5.4:57445210-57445229 None:intergenic 35.0%
TGGAAGAAATAGTAGGCTTT+GGG - chr5.4:57446779-57446798 None:intergenic 35.0%
TTTGAGGGATGGGAAATATA+GGG + chr5.4:57446526-57446545 MS.gene26170:intron 35.0%
! AGAACAAAGTGCTTATTAGG+AGG - chr5.4:57445252-57445271 None:intergenic 35.0%
! GGAAGAACAAAGTGCTTATT+AGG - chr5.4:57445255-57445274 None:intergenic 35.0%
! GGATAAAGTATTATACAGCC+AGG + chr5.4:57446008-57446027 MS.gene26170:intron 35.0%
! TCTAGCAAAATCTTGGTAGT+TGG + chr5.4:57446045-57446064 MS.gene26170:intron 35.0%
! TTAGGATTTGTTTGCGAGTT+TGG - chr5.4:57446850-57446869 None:intergenic 35.0%
!! ATTGTATTTGAGGGTTTTGG+GGG - chr5.4:57446688-57446707 None:intergenic 35.0%
!! CTTTTGAGAAGATCGCTATT+TGG + chr5.4:57445283-57445302 MS.gene26170:CDS 35.0%
!!! AGTTTTGGACAAACCTTTGA+AGG + chr5.4:57447708-57447727 MS.gene26170:CDS 35.0%
AACTCCCAAACAAAGCCTTA+GGG - chr5.4:57446483-57446502 None:intergenic 40.0%
AAGATCGCTATTTGGAAAGC+TGG + chr5.4:57445291-57445310 MS.gene26170:CDS 40.0%
AAGGGACTAAATTGACCCTA+AGG + chr5.4:57446465-57446484 MS.gene26170:intron 40.0%
AATTTCTGTGCGCCGAATTA+TGG + chr5.4:57445195-57445214 MS.gene26170:CDS 40.0%
ACAACTCCGATCATTAGTGT+CGG + chr5.4:57445585-57445604 MS.gene26170:intron 40.0%
ACATTGTATGAAGATACGGC+TGG - chr5.4:57447021-57447040 None:intergenic 40.0%
ATGGGAAATATAGGGGGAAA+TGG + chr5.4:57446534-57446553 MS.gene26170:intron 40.0%
ATGTCTGTCATGTCACATGT+TGG + chr5.4:57445534-57445553 MS.gene26170:intron 40.0%
ATTGTTGCGGTGAAGGTTAA+GGG + chr5.4:57447537-57447556 MS.gene26170:CDS 40.0%
ATTTCTGTGCGCCGAATTAT+GGG + chr5.4:57445196-57445215 MS.gene26170:CDS 40.0%
ATTTGTTTGCGAGTTTGGAG+GGG - chr5.4:57446845-57446864 None:intergenic 40.0%
CAAGTAGCAAAGGGATGAAA+GGG + chr5.4:57446447-57446466 MS.gene26170:intron 40.0%
CTAATGATCGGAGTTGTGTT+TGG - chr5.4:57445582-57445601 None:intergenic 40.0%
CTCGTAACCTCAAATGAAAG+AGG - chr5.4:57447639-57447658 None:intergenic 40.0%
GACTTATCAAAAGCCGGTTA+CGG + chr5.4:57445042-57445061 MS.gene26170:CDS 40.0%
GAGCAAGTGGAAGAAATAGT+AGG - chr5.4:57446786-57446805 None:intergenic 40.0%
GTAGCATAATGAGAGCTGTT+GGG - chr5.4:57447311-57447330 None:intergenic 40.0%
GTGGAAGAAATAGTAGGCTT+TGG - chr5.4:57446780-57446799 None:intergenic 40.0%
GTTCCCTTCTCATTAACTAC+AGG - chr5.4:57447070-57447089 None:intergenic 40.0%
GTTCCTTTATCAGCTATGCT+TGG - chr5.4:57447262-57447281 None:intergenic 40.0%
GTTTCGTACACGGTTTGAAA+CGG - chr5.4:57447157-57447176 None:intergenic 40.0%
TACGGAGACTTATCAAAAGC+CGG + chr5.4:57445036-57445055 MS.gene26170:CDS 40.0%
TACGGTGTGTGGATGATTTA+CGG + chr5.4:57445133-57445152 MS.gene26170:CDS 40.0%
TAGCATAATGAGAGCTGTTG+GGG - chr5.4:57447310-57447329 None:intergenic 40.0%
TAGCCAAGCATAGCTGATAA+AGG + chr5.4:57447256-57447275 MS.gene26170:intron 40.0%
TATGCTTGGCTATTAACCCA+CGG - chr5.4:57447248-57447267 None:intergenic 40.0%
TCAAGTAGCAAAGGGATGAA+AGG + chr5.4:57446446-57446465 MS.gene26170:intron 40.0%
TGTAGCATAATGAGAGCTGT+TGG - chr5.4:57447312-57447331 None:intergenic 40.0%
TGTCCAAAACTCCAGTCTTT+GGG - chr5.4:57447699-57447718 None:intergenic 40.0%
TTGAGGGATGGGAAATATAG+GGG + chr5.4:57446527-57446546 MS.gene26170:intron 40.0%
TTGAGGTTACGAGTAGTGAT+GGG + chr5.4:57447646-57447665 MS.gene26170:CDS 40.0%
TTGTCCAAAACTCCAGTCTT+TGG - chr5.4:57447700-57447719 None:intergenic 40.0%
TTTCAAACCGTGTACGAAAC+AGG + chr5.4:57447157-57447176 MS.gene26170:intron 40.0%
! ACCAAGATTTTGCTAGACAG+TGG - chr5.4:57446042-57446061 None:intergenic 40.0%
! ACGCGTTTATATGCCAGTTT+TGG - chr5.4:57447602-57447621 None:intergenic 40.0%
! CTTTGAGGGATGGGAAATAT+AGG + chr5.4:57446525-57446544 MS.gene26170:intron 40.0%
! GATTTGTTTGCGAGTTTGGA+GGG - chr5.4:57446846-57446865 None:intergenic 40.0%
! TAGTGATGGGAAAACAGTCA+CGG + chr5.4:57447659-57447678 MS.gene26170:CDS 40.0%
! TGTTGTGTTATGTTTGGAGC+AGG + chr5.4:57447418-57447437 MS.gene26170:intron 40.0%
! TTTCGTACACGGTTTGAAAC+GGG - chr5.4:57447156-57447175 None:intergenic 40.0%
! TTTGAGGTTACGAGTAGTGA+TGG + chr5.4:57447645-57447664 MS.gene26170:CDS 40.0%
!! AAGAACAGGTTGGCTTTCAA+TGG + chr5.4:57447563-57447582 MS.gene26170:CDS 40.0%
!! AGAACAGGTTGGCTTTCAAT+GGG + chr5.4:57447564-57447583 MS.gene26170:CDS 40.0%
!! AGTGAAGCTTTGTTTGAACG+AGG + chr5.4:57445084-57445103 MS.gene26170:CDS 40.0%
!! ATTGACCCTAAGGCTTTGTT+TGG + chr5.4:57446475-57446494 MS.gene26170:intron 40.0%
!! GTTAATTTGTTAGGGGGAGA+GGG + chr5.4:57446250-57446269 MS.gene26170:intron 40.0%
!! TTGACCCTAAGGCTTTGTTT+GGG + chr5.4:57446476-57446495 MS.gene26170:intron 40.0%
AAGGTTAAGGGCTCAAGAAC+AGG + chr5.4:57447549-57447568 MS.gene26170:CDS 45.0%
ACAATGTTGCTCCCAAAGAC+TGG + chr5.4:57447685-57447704 MS.gene26170:CDS 45.0%
ACATGCCTCTTCAGTATCGT+AGG + chr5.4:57445316-57445335 MS.gene26170:CDS 45.0%
AGGATAAAGTGCAGAAGGGA+AGG + chr5.4:57447438-57447457 MS.gene26170:intron 45.0%
AGGATGCACACCTTTCTCTT+TGG + chr5.4:57446349-57446368 MS.gene26170:intron 45.0%
ATAAAGTGCAGAAGGGAAGG+TGG + chr5.4:57447441-57447460 MS.gene26170:CDS 45.0%
CAGATCCGGTGACTGTAAAT+CGG - chr5.4:57447470-57447489 None:intergenic 45.0%
CATTGTTGCGGTGAAGGTTA+AGG + chr5.4:57447536-57447555 MS.gene26170:CDS 45.0%
CCAACGGACGAGATTTGATT+GGG + chr5.4:57446087-57446106 MS.gene26170:intron 45.0%
CGGTTTAAATGGTGCGAACA+CGG - chr5.4:57447228-57447247 None:intergenic 45.0%
CTCCATTATGAGTGGCAAAC+TGG + chr5.4:57446930-57446949 MS.gene26170:intron 45.0%
CTTTCAATGGGTCGGAATTG+GGG + chr5.4:57447576-57447595 MS.gene26170:CDS 45.0%
GAACTCCCAAACAAAGCCTT+AGG - chr5.4:57446484-57446503 None:intergenic 45.0%
GAAGATTGTTGAGAAGGTGG+TGG - chr5.4:57444931-57444950 None:intergenic 45.0%
GAAGGGGAAGATTGTTGAGA+AGG - chr5.4:57444937-57444956 None:intergenic 45.0%
GAGCAGGATAAAGTGCAGAA+GGG + chr5.4:57447434-57447453 MS.gene26170:intron 45.0%
GATTTACGGTGGTGTATTCC+TGG + chr5.4:57445147-57445166 MS.gene26170:CDS 45.0%
GCCACTGTCTAGCAAAATCT+TGG + chr5.4:57446038-57446057 MS.gene26170:intron 45.0%
GCTCGAAACGAAAGAGTAGT+TGG - chr5.4:57445355-57445374 None:intergenic 45.0%
GCTTTCAATGGGTCGGAATT+GGG + chr5.4:57447575-57447594 MS.gene26170:CDS 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr5.4:57446799-57446818 None:intergenic 45.0%
GGAAATATAGGGGGAAATGG+AGG + chr5.4:57446537-57446556 MS.gene26170:intron 45.0%
GGTTTAAATGGTGCGAACAC+GGG - chr5.4:57447227-57447246 None:intergenic 45.0%
GTTCGCACCATTTAAACCGT+GGG + chr5.4:57447229-57447248 MS.gene26170:intron 45.0%
TATGGGTTTACGGTTGAAGG+TGG + chr5.4:57445213-57445232 MS.gene26170:CDS 45.0%
TCCAACGGACGAGATTTGAT+TGG + chr5.4:57446086-57446105 MS.gene26170:intron 45.0%
TGAGGGATGGGAAATATAGG+GGG + chr5.4:57446528-57446547 MS.gene26170:intron 45.0%
TGCCAGTTTGCCACTCATAA+TGG - chr5.4:57446935-57446954 None:intergenic 45.0%
TGCGCCGAATTATGGGTTTA+CGG + chr5.4:57445203-57445222 MS.gene26170:CDS 45.0%
TGTTCGCACCATTTAAACCG+TGG + chr5.4:57447228-57447247 MS.gene26170:intron 45.0%
TTAAGGGCTCAAGAACAGGT+TGG + chr5.4:57447553-57447572 MS.gene26170:CDS 45.0%
TTGGACACTCTGACACATGT+TGG + chr5.4:57445553-57445572 MS.gene26170:intron 45.0%
TTTGAACGAGGTCAGATCTG+TGG + chr5.4:57445096-57445115 MS.gene26170:CDS 45.0%
! AAGAGAAAGGTGTGCATCCT+TGG - chr5.4:57446349-57446368 None:intergenic 45.0%
! ATCGCCATTCGGTGAAAGAA+GGG - chr5.4:57444954-57444973 None:intergenic 45.0%
! ATTTTGCTAGACAGTGGCAG+AGG - chr5.4:57446036-57446055 None:intergenic 45.0%
! CTTTGTTTGGGAGTTCAGAG+AGG + chr5.4:57446488-57446507 MS.gene26170:intron 45.0%
! GGATTTGTTTGCGAGTTTGG+AGG - chr5.4:57446847-57446866 None:intergenic 45.0%
! GTGCTTTGAATTACGGTGTG+TGG + chr5.4:57445122-57445141 MS.gene26170:CDS 45.0%
!! GAAATAGTAGGCTTTGGGAG+CGG - chr5.4:57446774-57446793 None:intergenic 45.0%
!! GAGGGCTTTGGAAAAAAGGA+AGG - chr5.4:57446808-57446827 None:intergenic 45.0%
!! GGTTAATTTGTTAGGGGGAG+AGG + chr5.4:57446249-57446268 MS.gene26170:intron 45.0%
!! GTAGCACCGACACTAATGAT+CGG - chr5.4:57445594-57445613 None:intergenic 45.0%
!! TTTGATTGGGTTGGCTGCAA+AGG + chr5.4:57446100-57446119 MS.gene26170:intron 45.0%
AAACCGTGTACGAAACAGGC+TGG + chr5.4:57447161-57447180 MS.gene26170:intron 50.0%
AACAGTTGCCATGCCGTAAC+CGG - chr5.4:57445058-57445077 None:intergenic 50.0%
AACCGTGTACGAAACAGGCT+GGG + chr5.4:57447162-57447181 MS.gene26170:intron 50.0%
ACTGTGTCACGTGGATCTAC+CGG - chr5.4:57445000-57445019 None:intergenic 50.0%
ATCAAAAGCCGGTTACGGCA+TGG + chr5.4:57445047-57445066 MS.gene26170:CDS 50.0%
ATCAGCAATGTTGCTGGCCA+TGG + chr5.4:57447510-57447529 MS.gene26170:CDS 50.0%
CCCAATCAAATCTCGTCCGT+TGG - chr5.4:57446090-57446109 None:intergenic 50.0%
CGATTTACAGTCACCGGATC+TGG + chr5.4:57447468-57447487 MS.gene26170:CDS 50.0%
CGGACGAGATTTGATTGGGT+TGG + chr5.4:57446091-57446110 MS.gene26170:intron 50.0%
CTTCCCCTTCTTTCACCGAA+TGG + chr5.4:57444947-57444966 MS.gene26170:CDS 50.0%
GGAGCAGGATAAAGTGCAGA+AGG + chr5.4:57447433-57447452 MS.gene26170:intron 50.0%
GGAGTCCGATTTACAGTCAC+CGG + chr5.4:57447462-57447481 MS.gene26170:CDS 50.0%
GGCTTTCAATGGGTCGGAAT+TGG + chr5.4:57447574-57447593 MS.gene26170:CDS 50.0%
GGGGAAGATTGTTGAGAAGG+TGG - chr5.4:57444934-57444953 None:intergenic 50.0%
GGTGTGTGGATGATTTACGG+TGG + chr5.4:57445136-57445155 MS.gene26170:CDS 50.0%
GTAGATCCACGTGACACAGT+CGG + chr5.4:57445000-57445019 MS.gene26170:CDS 50.0%
GTTTGGGAGTTCAGAGAGGA+GGG + chr5.4:57446492-57446511 MS.gene26170:intron 50.0%
TCACCGCAACAATGTCTCCA+TGG - chr5.4:57447530-57447549 None:intergenic 50.0%
TGAGCTTCAGCTCGATCCAA+CGG + chr5.4:57446071-57446090 MS.gene26170:intron 50.0%
TGGAGACATTGTTGCGGTGA+AGG + chr5.4:57447530-57447549 MS.gene26170:CDS 50.0%
TGGCCATGGAGACATTGTTG+CGG + chr5.4:57447524-57447543 MS.gene26170:CDS 50.0%
TGTTTGGGAGTTCAGAGAGG+AGG + chr5.4:57446491-57446510 MS.gene26170:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr5.4:57446840-57446859 None:intergenic 50.0%
TTTGGGAGTTCAGAGAGGAG+GGG + chr5.4:57446493-57446512 MS.gene26170:intron 50.0%
! AGAAAGGTGTGCATCCTTGG+AGG - chr5.4:57446346-57446365 None:intergenic 50.0%
! AGAAGGTGGTGGTTGAGAAG+AGG - chr5.4:57444920-57444939 None:intergenic 50.0%
! GATCGCCATTCGGTGAAAGA+AGG - chr5.4:57444955-57444974 None:intergenic 50.0%
! GCTCCCAAAGACTGGAGTTT+TGG + chr5.4:57447693-57447712 MS.gene26170:CDS 50.0%
! GTGCTGATCAGCAATGTTGC+TGG + chr5.4:57447504-57447523 MS.gene26170:CDS 50.0%
! GTGGCGCGTGCTTTGAATTA+CGG + chr5.4:57445115-57445134 MS.gene26170:CDS 50.0%
! TCGCCATTCGGTGAAAGAAG+GGG - chr5.4:57444953-57444972 None:intergenic 50.0%
!! AATGGAGGGCTTTGAGGGAT+GGG + chr5.4:57446516-57446535 MS.gene26170:intron 50.0%
!! AGGGGAGGGCTTTGGAAAAA+AGG - chr5.4:57446812-57446831 None:intergenic 50.0%
!! CAGGTTGGCTTTCAATGGGT+CGG + chr5.4:57447568-57447587 MS.gene26170:CDS 50.0%
ACCACTTGACTGCTCCTCCA+AGG + chr5.4:57446329-57446348 MS.gene26170:intron 55.0%
AGCCCAGCCTGTTTCGTACA+CGG - chr5.4:57447167-57447186 None:intergenic 55.0%
CTGTGTCACGTGGATCTACC+GGG - chr5.4:57444999-57445018 None:intergenic 55.0%
GAGTTCAGAGAGGAGGGGAA+TGG + chr5.4:57446498-57446517 MS.gene26170:intron 55.0%
GGAGGAGCAGTCAAGTGGTA+TGG - chr5.4:57446328-57446347 None:intergenic 55.0%
GGGTTTACGGTTGAAGGTGG+TGG + chr5.4:57445216-57445235 MS.gene26170:CDS 55.0%
GGTTACGGCATGGCAACTGT+TGG + chr5.4:57445057-57445076 MS.gene26170:CDS 55.0%
GTCGGAATTGGGGCCAAAAC+TGG + chr5.4:57447586-57447605 MS.gene26170:CDS 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr5.4:57446841-57446860 None:intergenic 55.0%
TAGACAGTGGCAGAGGATCC+TGG - chr5.4:57446029-57446048 None:intergenic 55.0%
TAGGGCTGAGTGTGCATTGC+AGG + chr5.4:57447123-57447142 MS.gene26170:intron 55.0%
TCAGAGAGGAGGGGAATGGA+GGG + chr5.4:57446502-57446521 MS.gene26170:intron 55.0%
TCCTTGGAGGAGCAGTCAAG+TGG - chr5.4:57446333-57446352 None:intergenic 55.0%
TGTGTCACGTGGATCTACCG+GGG - chr5.4:57444998-57445017 None:intergenic 55.0%
TTCAGAGAGGAGGGGAATGG+AGG + chr5.4:57446501-57446520 MS.gene26170:intron 55.0%
! AGGGGAATGGAGGGCTTTGA+GGG + chr5.4:57446511-57446530 MS.gene26170:intron 55.0%
!! ATAGTAGGCTTTGGGAGCGG+AGG - chr5.4:57446771-57446790 None:intergenic 55.0%
!! GAATGGAGGGCTTTGAGGGA+TGG + chr5.4:57446515-57446534 MS.gene26170:intron 55.0%
!! GGGTTGGCTGCAAAGGTTTC+TGG + chr5.4:57446107-57446126 MS.gene26170:intron 55.0%
!! TAGTAGGCTTTGGGAGCGGA+GGG - chr5.4:57446770-57446789 None:intergenic 55.0%
ATCTACCGGGGCGTAGTAGG+TGG - chr5.4:57444986-57445005 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr5.4:57446836-57446855 None:intergenic 60.0%
GAGGGGAATGGAGGGCTTTG+AGG + chr5.4:57446510-57446529 MS.gene26170:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr5.4:57446835-57446854 None:intergenic 60.0%
GATCCACGTGACACAGTCGG+CGG + chr5.4:57445003-57445022 MS.gene26170:CDS 60.0%
TGGATCTACCGGGGCGTAGT+AGG - chr5.4:57444989-57445008 None:intergenic 60.0%
TTTGGGAGCGGAGGGCTTTG+GGG - chr5.4:57446762-57446781 None:intergenic 60.0%
! CTTTGGGAGCGGAGGGCTTT+GGG - chr5.4:57446763-57446782 None:intergenic 60.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr5.4:57446837-57446856 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr5.4:57446831-57446850 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr5.4:57446832-57446851 None:intergenic 65.0%
! TTGGGAGCGGAGGGCTTTGG+GGG - chr5.4:57446761-57446780 None:intergenic 65.0%
!! GCTTTGGGAGCGGAGGGCTT+TGG - chr5.4:57446764-57446783 None:intergenic 65.0%
ACGCGCCACCTACTACGCCC+CGG + chr5.4:57444978-57444997 MS.gene26170:CDS 70.0%
GGCGCGTGCGGATCGCCATT+CGG - chr5.4:57444965-57444984 None:intergenic 70.0%
GGCGTAGTAGGTGGCGCGTG+CGG - chr5.4:57444977-57444996 None:intergenic 70.0%
TGGAGGGGAAGGGAGGGGAG+GGG - chr5.4:57446830-57446849 None:intergenic 70.0%
AGGGGAAGGGAGGGGAGGGG+AGG - chr5.4:57446827-57446846 None:intergenic 75.0%
GACACAGTCGGCGGCGCGTG+TGG + chr5.4:57445012-57445031 MS.gene26170:CDS 75.0%
GGGAGGGGAGGGGAGGGCTT+TGG - chr5.4:57446820-57446839 None:intergenic 75.0%
GGGGAAGGGAGGGGAGGGGA+GGG - chr5.4:57446826-57446845 None:intergenic 75.0%
GTCGGCGGCGCGTGTGGCTA+CGG + chr5.4:57445018-57445037 MS.gene26170:CDS 75.0%
! GCGCCGCCGACTGTGTCACG+TGG - chr5.4:57445009-57445028 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 57444838 57447749 57444838 ID=MS.gene26170
chr5.4 mRNA 57444838 57447749 57444838 ID=MS.gene26170.t1;Parent=MS.gene26170
chr5.4 exon 57444838 57445337 57444838 ID=MS.gene26170.t1.exon1;Parent=MS.gene26170.t1
chr5.4 CDS 57444838 57445337 57444838 ID=cds.MS.gene26170.t1;Parent=MS.gene26170.t1
chr5.4 exon 57447440 57447749 57447440 ID=MS.gene26170.t1.exon2;Parent=MS.gene26170.t1
chr5.4 CDS 57447440 57447749 57447440 ID=cds.MS.gene26170.t1;Parent=MS.gene26170.t1
Gene Sequence

>MS.gene26170

ATGTTACTTACAACGTTCTTCTTTCTCTTTACACTCTCTTCAACAACAACAACAACCGTTACATCTCACTACTCTTCTTCCTCTTCTCAACCACCACCTTCTCAACAATCTTCCCCTTCTTTCACCGAATGGCGATCCGCACGCGCCACCTACTACGCCCCGGTAGATCCACGTGACACAGTCGGCGGCGCGTGTGGCTACGGAGACTTATCAAAAGCCGGTTACGGCATGGCAACTGTTGGTCTTAGTGAAGCTTTGTTTGAACGAGGTCAGATCTGTGGCGCGTGCTTTGAATTACGGTGTGTGGATGATTTACGGTGGTGTATTCCTGGAACTTCGATTATTGTTACTGCTACGAATTTCTGTGCGCCGAATTATGGGTTTACGGTTGAAGGTGGTGGACATTGTAATCCTCCTAATAAGCACTTTGTTCTTCCTATTGATGCTTTTGAGAAGATCGCTATTTGGAAAGCTGGTAACATGCCTCTTCAGTATCGTAGGTAATATTAAGTAACCAACTACTCTTTCGTTTCGAGCTTTGCATGTTGTCAATTGCAATGATTGTTGATTACTTGAATTGAAACTAATCTAATTGTTTGAAGTGATTGTTGATGGTTGCTTGTTTATAAACTCTAACAATTGCTGTGAAGCACGATCTGATAATAATCTGAGAAAATGACATATTTCAATGTAATCATGTCTGTCATGTCACATGTTGGACACTCTGACACATGTTGGACACCAAACACAACTCCGATCATTAGTGTCGGTGCTACAGAGCTTCATATTAATGGTGGTAAAACTTGGAGAATGATAAACTTAAGTACTTAAATTTTAGTTTGAAATTGAGTCAAATTTACTGTTTCGACTTGACTTGTTTGAGAATTATAGAATTTAATAGCATACTTGAGTTTGGCTTGTTTATGAATTGGTTATTTCTATTTTTCCTATGGAATATCTTCTTGAAAAAAATATTAAGCTTGTTGGATTATATGGTATTTACTATTTAGTGAAATTTTGATGCTTACAAACGAAGTTATAGGAGTAAGTTAGGTAGCTTTAATATTCAAGATAAAATTACAATAGATATATAAGTTATTGTTATTGTTATGATATGTAGTTTGAACTTTGAAGCTACATTGAAACCTTGAATGGTAGTTTTAGTAATAAGGATAAAGTATTATACAGCCAGGATCCTCTGCCACTGTCTAGCAAAATCTTGGTAGTTGGATCTGAGCTTCAGCTCGATCCAACGGACGAGATTTGATTGGGTTGGCTGCAAAGGTTTCTGGCTGTACATTGTAAGCACTTGACAAATTCTACAAGAGTTTATCCCAAGTTTAATGGAATTTGTGTTTTGTCATTGGCTTCTTAATTGGCAACTTTCTTTGCTGAGAAACAAATTGTTAATGGTTAATTTGTTAGGGGGAGAGGGTTTTTGTTAGTAGCACTGAACTTTATGCATAATGCTCATTTGGTTTTTCAATCCATACCACTTGACTGCTCCTCCAAGGATGCACACCTTTCTCTTTGGAACTTTATGCTCTCGAGAGCTGAAATAAGAAAAGCTTTCTAAAAATAGTTGTGCCTTCCTAGTGCTAATGAAATTCAAGTAGCAAAGGGATGAAAGGGACTAAATTGACCCTAAGGCTTTGTTTGGGAGTTCAGAGAGGAGGGGAATGGAGGGCTTTGAGGGATGGGAAATATAGGGGGAAATGGAGGAATCTTTTACACATTTTGAAATAGTATTTTTTTAGAGAATGATAAATTAATGTTTATGATTAATATATTTTTAATTTTAAGAATATTATAACAACATAGATTGAATTTGAAGAATTCTTATAAAGCCCCCAAAACCCTCAAATACAATTTTTGATTTCCCCCAAATTAATGGGATTTTGTATTATGAAGAAAAATTAACCCCCAAAGCCCTCCGCTCCCAAAGCCTACTATTTCTTCCACTTGCTCCTTCCTTTTTTCCAAAGCCCTCCCCTCCCCTCCCTTCCCCTCCAAACTCGCAAACAAATCCTAAAGGAAAATAGGATAGTAGTAAGTGTATTTATCTCAGAAAAGCTTAATGCGAAATATTTTGCTCCATTATGAGTGGCAAACTGGCAGCTAATGAGACTAATGACATGCTACTCTCCCAACATTTTTCCATACATAGAATTCAATTAGTACCAGCCGTATCTTCATACAATGTTAATGGTAAAAGATCTCAAGTAAATTCCTGTAGTTAATGAGAAGGGAACAATGTGTAAGTGTAATTTTGCTAGCAAGTACATTAGGGCTGAGTGTGCATTGCAGGTAGCATGCCCGTTTCAAACCGTGTACGAAACAGGCTGGGCTAGAAAAGACCGCAAAATTAATGGTCTAATAAAATAGACCCGTGTTCGCACCATTTAAACCGTGGGTTAATAGCCAAGCATAGCTGATAAAGGAACTTGTGGTTAGAAGATGAACAATACACCCCAACAGCTCTCATTATGCTACATCATTTACTGTCGGAAGAGACAATCAAACAAGTTTTACTTTGTTTACTTAAAAAAACTTGATTTTGGTTTTATTATTTAATTTGAATGTTGTGTTATGTTTGGAGCAGGATAAAGTGCAGAAGGGAAGGTGGAGTCCGATTTACAGTCACCGGATCTGGTATATTCATTTCAGTGCTGATCAGCAATGTTGCTGGCCATGGAGACATTGTTGCGGTGAAGGTTAAGGGCTCAAGAACAGGTTGGCTTTCAATGGGTCGGAATTGGGGCCAAAACTGGCATATAAACGCGTTACTACAGAATCAACCTCTTTCATTTGAGGTTACGAGTAGTGATGGGAAAACAGTCACGGCTTACAATGTTGCTCCCAAAGACTGGAGTTTTGGACAAACCTTTGAAGGCAAGCAATTTGATTATTAA
Protein sequence

>MS.gene26170.t1

MLLTTFFFLFTLSSTTTTTVTSHYSSSSSQPPPSQQSSPSFTEWRSARATYYAPVDPRDTVGGACGYGDLSKAGYGMATVGLSEALFERGQICGACFELRCVDDLRWCIPGTSIIVTATNFCAPNYGFTVEGGGHCNPPNKHFVLPIDAFEKIAIWKAGNMPLQYRRIKCRREGGVRFTVTGSGIFISVLISNVAGHGDIVAVKVKGSRTGWLSMGRNWGQNWHINALLQNQPLSFEVTSSDGKTVTAYNVAPKDWSFGQTFEGKQFDY