Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063617.t1 | XP_003616175.1 | 97.4 | 231 | 6 | 0 | 38 | 268 | 36 | 266 | 1.60E-134 | 488.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063617.t1 | Q9M9P0 | 83.7 | 227 | 37 | 0 | 41 | 267 | 38 | 264 | 4.0e-118 | 425.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063617.t1 | G7KFU6 | 97.4 | 231 | 6 | 0 | 38 | 268 | 36 | 266 | 1.2e-134 | 488.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063617 | MS.gene84420 | PPI |
| MS.gene073262 | MS.gene063617 | PPI |
| MS.gene068488 | MS.gene063617 | PPI |
| MS.gene063617 | MS.gene29490 | PPI |
| MS.gene64672 | MS.gene063617 | PPI |
| MS.gene043407 | MS.gene063617 | PPI |
| MS.gene028920 | MS.gene063617 | PPI |
| MS.gene063617 | MS.gene055823 | PPI |
| MS.gene50162 | MS.gene063617 | PPI |
| MS.gene31483 | MS.gene063617 | PPI |
| MS.gene32554 | MS.gene063617 | PPI |
| MS.gene98660 | MS.gene063617 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063617.t1 | MTR_5g076950 | 95.896 | 268 | 9 | 1 | 1 | 268 | 1 | 266 | 0.0 | 536 |
| MS.gene063617.t1 | MTR_3g064510 | 65.233 | 279 | 84 | 5 | 1 | 266 | 6 | 284 | 3.06e-130 | 370 |
| MS.gene063617.t1 | MTR_0040s0140 | 60.619 | 226 | 88 | 1 | 42 | 266 | 31 | 256 | 4.73e-99 | 290 |
| MS.gene063617.t1 | MTR_2g090255 | 57.328 | 232 | 98 | 1 | 36 | 266 | 21 | 252 | 3.37e-97 | 285 |
| MS.gene063617.t1 | MTR_5g079950 | 55.556 | 225 | 99 | 1 | 43 | 266 | 33 | 257 | 1.67e-90 | 269 |
| MS.gene063617.t1 | MTR_5g041700 | 56.696 | 224 | 96 | 1 | 43 | 266 | 25 | 247 | 5.02e-90 | 267 |
| MS.gene063617.t1 | MTR_3g435430 | 56.696 | 224 | 96 | 1 | 43 | 266 | 25 | 247 | 6.17e-90 | 267 |
| MS.gene063617.t1 | MTR_7g061720 | 50.781 | 256 | 121 | 2 | 12 | 266 | 5 | 256 | 2.10e-89 | 266 |
| MS.gene063617.t1 | MTR_2g097030 | 55.111 | 225 | 100 | 1 | 43 | 266 | 34 | 258 | 1.76e-88 | 263 |
| MS.gene063617.t1 | MTR_5g075320 | 54.386 | 228 | 103 | 1 | 39 | 266 | 25 | 251 | 2.64e-88 | 263 |
| MS.gene063617.t1 | MTR_4g081950 | 54.911 | 224 | 100 | 1 | 43 | 266 | 61 | 283 | 4.96e-88 | 263 |
| MS.gene063617.t1 | MTR_3g466790 | 55.357 | 224 | 99 | 1 | 43 | 266 | 32 | 254 | 7.44e-88 | 262 |
| MS.gene063617.t1 | MTR_3g094060 | 54.018 | 224 | 102 | 1 | 43 | 266 | 31 | 253 | 9.98e-88 | 261 |
| MS.gene063617.t1 | MTR_3g094040 | 54.018 | 224 | 102 | 1 | 43 | 266 | 31 | 253 | 2.58e-87 | 260 |
| MS.gene063617.t1 | MTR_3g466760 | 52.790 | 233 | 109 | 1 | 34 | 266 | 29 | 260 | 1.41e-86 | 259 |
| MS.gene063617.t1 | MTR_7g011060 | 52.863 | 227 | 98 | 2 | 42 | 268 | 25 | 242 | 2.99e-85 | 254 |
| MS.gene063617.t1 | MTR_4g063975 | 55.752 | 226 | 99 | 1 | 42 | 266 | 31 | 256 | 1.41e-82 | 248 |
| MS.gene063617.t1 | MTR_7g013140 | 53.125 | 224 | 102 | 2 | 42 | 264 | 27 | 248 | 1.87e-81 | 245 |
| MS.gene063617.t1 | MTR_7g013150 | 51.786 | 224 | 105 | 2 | 42 | 264 | 29 | 250 | 1.68e-79 | 240 |
| MS.gene063617.t1 | MTR_8g464350 | 50.661 | 227 | 109 | 2 | 37 | 262 | 25 | 249 | 5.98e-78 | 236 |
| MS.gene063617.t1 | MTR_8g058990 | 50.661 | 227 | 109 | 2 | 38 | 263 | 25 | 249 | 1.24e-77 | 236 |
| MS.gene063617.t1 | MTR_1g026020 | 49.554 | 224 | 111 | 1 | 43 | 264 | 29 | 252 | 3.68e-77 | 234 |
| MS.gene063617.t1 | MTR_1g085460 | 50.222 | 225 | 109 | 2 | 43 | 264 | 30 | 254 | 3.66e-76 | 232 |
| MS.gene063617.t1 | MTR_4g124340 | 42.701 | 274 | 144 | 5 | 3 | 265 | 12 | 283 | 1.12e-75 | 232 |
| MS.gene063617.t1 | MTR_6g012520 | 53.097 | 226 | 97 | 2 | 43 | 268 | 28 | 244 | 2.07e-74 | 227 |
| MS.gene063617.t1 | MTR_7g013120 | 50.885 | 226 | 107 | 3 | 42 | 265 | 28 | 251 | 2.19e-74 | 228 |
| MS.gene063617.t1 | MTR_7g110990 | 48.430 | 223 | 112 | 2 | 43 | 262 | 12 | 234 | 6.54e-73 | 223 |
| MS.gene063617.t1 | MTR_7g111010 | 48.430 | 223 | 112 | 2 | 43 | 262 | 27 | 249 | 7.12e-73 | 224 |
| MS.gene063617.t1 | MTR_5g011210 | 45.333 | 225 | 122 | 1 | 41 | 264 | 35 | 259 | 1.46e-66 | 208 |
| MS.gene063617.t1 | MTR_4g102450 | 45.701 | 221 | 119 | 1 | 43 | 262 | 36 | 256 | 5.85e-63 | 199 |
| MS.gene063617.t1 | MTR_0008s0120 | 36.283 | 226 | 87 | 5 | 38 | 263 | 27 | 195 | 2.27e-37 | 131 |
| MS.gene063617.t1 | MTR_6g012500 | 47.244 | 127 | 66 | 1 | 143 | 268 | 156 | 282 | 4.18e-36 | 130 |
| MS.gene063617.t1 | MTR_2g090270 | 28.390 | 236 | 144 | 7 | 41 | 264 | 33 | 255 | 4.89e-23 | 95.1 |
| MS.gene063617.t1 | MTR_4g028640 | 31.250 | 240 | 123 | 11 | 43 | 262 | 42 | 259 | 5.11e-23 | 95.1 |
| MS.gene063617.t1 | MTR_2g090265 | 29.362 | 235 | 141 | 8 | 42 | 264 | 32 | 253 | 4.98e-22 | 92.4 |
| MS.gene063617.t1 | MTR_0122s0020 | 30.213 | 235 | 139 | 8 | 42 | 264 | 40 | 261 | 6.83e-22 | 92.0 |
| MS.gene063617.t1 | MTR_0118s0070 | 29.565 | 230 | 133 | 11 | 48 | 261 | 53 | 269 | 6.84e-18 | 81.3 |
| MS.gene063617.t1 | MTR_0809s0010 | 28.326 | 233 | 148 | 10 | 39 | 262 | 43 | 265 | 8.15e-17 | 78.6 |
| MS.gene063617.t1 | MTR_4g075790 | 26.724 | 232 | 136 | 9 | 46 | 262 | 26 | 238 | 3.60e-13 | 68.2 |
| MS.gene063617.t1 | MTR_5g013440 | 27.706 | 231 | 148 | 10 | 46 | 267 | 32 | 252 | 6.58e-13 | 67.0 |
| MS.gene063617.t1 | MTR_1g085365 | 52.632 | 57 | 27 | 0 | 210 | 266 | 3 | 59 | 1.89e-12 | 61.2 |
| MS.gene063617.t1 | MTR_4g099370 | 27.119 | 236 | 149 | 9 | 36 | 262 | 24 | 245 | 9.84e-12 | 63.9 |
| MS.gene063617.t1 | MTR_0122s0020 | 29.775 | 178 | 101 | 7 | 42 | 208 | 40 | 204 | 5.86e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063617.t1 | AT3G03220 | 84.071 | 226 | 36 | 0 | 42 | 267 | 39 | 264 | 4.71e-147 | 412 |
| MS.gene063617.t1 | AT5G56320 | 57.589 | 224 | 94 | 1 | 43 | 266 | 29 | 251 | 1.21e-92 | 274 |
| MS.gene063617.t1 | AT5G56320 | 57.589 | 224 | 94 | 1 | 43 | 266 | 29 | 251 | 1.21e-92 | 274 |
| MS.gene063617.t1 | AT5G56320 | 57.589 | 224 | 94 | 1 | 43 | 266 | 29 | 251 | 4.30e-92 | 274 |
| MS.gene063617.t1 | AT3G55500 | 50.936 | 267 | 115 | 2 | 1 | 266 | 7 | 258 | 5.96e-91 | 270 |
| MS.gene063617.t1 | AT5G05290 | 57.333 | 225 | 94 | 2 | 43 | 266 | 32 | 255 | 2.71e-90 | 268 |
| MS.gene063617.t1 | AT1G69530 | 50.376 | 266 | 115 | 2 | 1 | 266 | 1 | 249 | 3.22e-90 | 268 |
| MS.gene063617.t1 | AT1G69530 | 50.376 | 266 | 115 | 2 | 1 | 266 | 1 | 249 | 3.22e-90 | 268 |
| MS.gene063617.t1 | AT5G02260 | 54.667 | 225 | 101 | 1 | 43 | 266 | 32 | 256 | 6.28e-90 | 267 |
| MS.gene063617.t1 | AT2G37640 | 56.000 | 225 | 98 | 1 | 43 | 266 | 36 | 260 | 1.49e-89 | 266 |
| MS.gene063617.t1 | AT2G39700 | 55.556 | 225 | 99 | 1 | 43 | 266 | 31 | 255 | 7.63e-89 | 265 |
| MS.gene063617.t1 | AT3G29030 | 54.867 | 226 | 94 | 1 | 43 | 268 | 38 | 255 | 1.39e-88 | 264 |
| MS.gene063617.t1 | AT1G69530 | 50.575 | 261 | 112 | 2 | 1 | 261 | 1 | 244 | 2.48e-88 | 264 |
| MS.gene063617.t1 | AT2G03090 | 56.250 | 224 | 97 | 1 | 43 | 266 | 30 | 252 | 3.18e-88 | 263 |
| MS.gene063617.t1 | AT2G40610 | 52.444 | 225 | 105 | 2 | 43 | 266 | 30 | 253 | 1.28e-84 | 253 |
| MS.gene063617.t1 | AT1G26770 | 55.357 | 224 | 99 | 1 | 43 | 266 | 26 | 248 | 2.99e-84 | 252 |
| MS.gene063617.t1 | AT1G26770 | 55.357 | 224 | 99 | 1 | 43 | 266 | 36 | 258 | 3.89e-84 | 253 |
| MS.gene063617.t1 | AT2G37640 | 57.212 | 208 | 88 | 1 | 60 | 266 | 28 | 235 | 5.50e-84 | 251 |
| MS.gene063617.t1 | AT5G39270 | 51.261 | 238 | 113 | 2 | 27 | 264 | 42 | 276 | 7.87e-81 | 245 |
| MS.gene063617.t1 | AT2G28950 | 53.778 | 225 | 103 | 1 | 43 | 266 | 31 | 255 | 9.71e-81 | 244 |
| MS.gene063617.t1 | AT4G38210 | 51.754 | 228 | 107 | 2 | 42 | 266 | 27 | 254 | 2.32e-80 | 243 |
| MS.gene063617.t1 | AT5G39290 | 51.931 | 233 | 106 | 3 | 32 | 264 | 50 | 276 | 4.39e-80 | 243 |
| MS.gene063617.t1 | AT5G39280 | 52.232 | 224 | 104 | 2 | 41 | 264 | 52 | 272 | 5.16e-79 | 240 |
| MS.gene063617.t1 | AT5G39300 | 52.679 | 224 | 103 | 2 | 41 | 264 | 53 | 273 | 6.84e-79 | 240 |
| MS.gene063617.t1 | AT1G20190 | 49.091 | 220 | 110 | 1 | 45 | 262 | 28 | 247 | 1.88e-75 | 230 |
| MS.gene063617.t1 | AT1G69530 | 44.737 | 266 | 100 | 3 | 1 | 266 | 1 | 219 | 4.72e-73 | 223 |
| MS.gene063617.t1 | AT1G62980 | 48.444 | 225 | 115 | 1 | 41 | 264 | 29 | 253 | 5.86e-72 | 221 |
| MS.gene063617.t1 | AT1G69530 | 44.828 | 261 | 97 | 3 | 1 | 261 | 1 | 214 | 2.14e-71 | 219 |
| MS.gene063617.t1 | AT4G01630 | 49.107 | 224 | 109 | 3 | 43 | 262 | 28 | 250 | 5.46e-71 | 219 |
| MS.gene063617.t1 | AT5G39310 | 45.306 | 245 | 130 | 3 | 21 | 264 | 68 | 309 | 1.55e-68 | 214 |
| MS.gene063617.t1 | AT1G12560 | 46.154 | 221 | 117 | 2 | 43 | 262 | 37 | 256 | 1.80e-67 | 210 |
| MS.gene063617.t1 | AT5G39260 | 48.444 | 225 | 107 | 3 | 41 | 264 | 43 | 259 | 6.91e-66 | 206 |
| MS.gene063617.t1 | AT3G15370 | 47.414 | 232 | 107 | 6 | 43 | 266 | 27 | 251 | 2.30e-62 | 197 |
| MS.gene063617.t1 | AT1G20190 | 48.128 | 187 | 95 | 1 | 78 | 262 | 2 | 188 | 4.12e-62 | 194 |
| MS.gene063617.t1 | AT3G15370 | 47.907 | 215 | 97 | 6 | 60 | 266 | 74 | 281 | 1.13e-57 | 186 |
| MS.gene063617.t1 | AT4G28250 | 30.357 | 280 | 150 | 11 | 1 | 264 | 7 | 257 | 4.35e-24 | 98.2 |
| MS.gene063617.t1 | AT2G20750 | 30.859 | 256 | 151 | 9 | 24 | 264 | 20 | 264 | 1.01e-23 | 97.4 |
| MS.gene063617.t1 | AT4G28250 | 30.108 | 279 | 146 | 11 | 1 | 264 | 7 | 251 | 7.94e-22 | 92.0 |
| MS.gene063617.t1 | AT1G65680 | 28.099 | 242 | 146 | 9 | 36 | 262 | 40 | 268 | 1.54e-18 | 83.2 |
| MS.gene063617.t1 | AT2G20750 | 30.412 | 194 | 113 | 6 | 24 | 205 | 20 | 203 | 6.26e-15 | 72.4 |
| MS.gene063617.t1 | AT1G65681 | 27.397 | 219 | 129 | 8 | 59 | 262 | 14 | 217 | 9.90e-15 | 72.0 |
| MS.gene063617.t1 | AT4G17030 | 26.778 | 239 | 137 | 9 | 42 | 262 | 26 | 244 | 6.73e-13 | 67.0 |
| MS.gene063617.t1 | AT2G45110 | 25.431 | 232 | 147 | 8 | 45 | 262 | 35 | 254 | 1.49e-12 | 66.2 |
| MS.gene063617.t1 | AT4G28250 | 29.954 | 217 | 107 | 9 | 1 | 205 | 7 | 190 | 4.94e-11 | 61.2 |
Find 85 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCTGTGCGCCGAATTA+TGG | 0.120138 | 5.2:-65691179 | MS.gene063617:CDS |
| GGCTTCCAATGGGTCGGAAT+TGG | 0.251230 | 5.2:-65688858 | MS.gene063617:CDS |
| GCTTCCAATGGGTCGGAATT+GGG | 0.261409 | 5.2:-65688857 | MS.gene063617:CDS |
| CGATTTACTGTCACTGGTTC+TGG | 0.264534 | 5.2:-65688964 | MS.gene063617:CDS |
| TTGTCCAAAACTCCAATCTT+TGG | 0.277052 | 5.2:+65688735 | None:intergenic |
| GGAAGAACAAAATGCTTATT+AGG | 0.278767 | 5.2:+65691122 | None:intergenic |
| GCTCCCAAAGATTGGAGTTT+TGG | 0.282302 | 5.2:-65688739 | MS.gene063617:CDS |
| ATTTCTGTGCGCCGAATTAT+GGG | 0.321870 | 5.2:-65691178 | MS.gene063617:CDS |
| ACGCGTTTATATGCCAGTTT+TGG | 0.342695 | 5.2:+65688833 | None:intergenic |
| GATTTAAAGTGGTGTATTCC+TGG | 0.357927 | 5.2:-65691227 | MS.gene063617:CDS |
| CATCGTTGCGGTGAAGGTTA+AGG | 0.369985 | 5.2:-65688896 | MS.gene063617:CDS |
| TGTCCAAAACTCCAATCTTT+GGG | 0.371986 | 5.2:+65688736 | None:intergenic |
| GTCGGAATTGGGGCCAAAAC+TGG | 0.376301 | 5.2:-65688846 | MS.gene063617:CDS |
| TGCGCCGAATTATGGGTTTA+CGG | 0.384118 | 5.2:-65691171 | MS.gene063617:CDS |
| AGAAGAGTAGTGAGAGGTTA+CGG | 0.398576 | 5.2:+65691481 | None:intergenic |
| GAATCAACCTCTTTCATTTG+AGG | 0.401927 | 5.2:-65688803 | MS.gene063617:CDS |
| AACAGTTGCCATGCCGTAAC+CGG | 0.402191 | 5.2:+65691319 | None:intergenic |
| GTGGCGCGTGCTTTGAATTA+CGG | 0.402202 | 5.2:-65691259 | MS.gene063617:CDS |
| AATTATGGGTTTACGGTTGA+AGG | 0.412698 | 5.2:-65691164 | MS.gene063617:CDS |
| ACAATGTTGCTCCCAAAGAT+TGG | 0.419779 | 5.2:-65688747 | MS.gene063617:CDS |
| GACCTATCAAAAGCCGGTTA+CGG | 0.441093 | 5.2:-65691332 | MS.gene063617:CDS |
| ACTGTGTCACGTGGATCTAC+CGG | 0.453305 | 5.2:+65691377 | None:intergenic |
| GTCGGCGGCGCGTGTGGCTA+CGG | 0.454653 | 5.2:-65691356 | MS.gene063617:CDS |
| GTGCTGATCAGCAATGTTGC+TGG | 0.456538 | 5.2:-65688928 | MS.gene063617:CDS |
| ATCAAATTGCTTCCCTTCAA+AGG | 0.456675 | 5.2:+65688711 | None:intergenic |
| ATCGTTGCGGTGAAGGTTAA+GGG | 0.457051 | 5.2:-65688895 | MS.gene063617:CDS |
| CAGAACCAGTGACAGTAAAT+CGG | 0.461590 | 5.2:+65688965 | None:intergenic |
| GTAACAATAATCGAAGTTCC+AGG | 0.466240 | 5.2:+65691209 | None:intergenic |
| AAGATCGCTATTTGGAAAGC+TGG | 0.469148 | 5.2:-65691083 | MS.gene063617:CDS |
| GGGTTTACGGTTGAAGGTGG+TGG | 0.469331 | 5.2:-65691158 | MS.gene063617:CDS |
| ATCAGCAATGTTGCTGGCCA+TGG | 0.474378 | 5.2:-65688922 | MS.gene063617:CDS |
| AAGGTTAAGGGCTCAAGAAC+GGG | 0.477294 | 5.2:-65688883 | MS.gene063617:CDS |
| CTTCCAATGGGTCGGAATTG+GGG | 0.477971 | 5.2:-65688856 | MS.gene063617:CDS |
| GGCGCGTGCGGATCGCCATT+CGG | 0.481496 | 5.2:+65691412 | None:intergenic |
| CTTCCCCTTCTTTCACCGAA+TGG | 0.483052 | 5.2:-65691427 | MS.gene063617:CDS |
| ATCTTCTCAAAAGCATCAAT+AGG | 0.486912 | 5.2:+65691101 | None:intergenic |
| GGAGTCCGATTTACTGTCAC+TGG | 0.495454 | 5.2:-65688970 | MS.gene063617:CDS |
| TGGATCTACCGGGGCGTAGT+AGG | 0.498940 | 5.2:+65691388 | None:intergenic |
| TTTGAGGTTACGAGTAGTGA+TGG | 0.501425 | 5.2:-65688787 | MS.gene063617:CDS |
| CTCGTAACCTCAAATGAAAG+AGG | 0.502745 | 5.2:+65688796 | None:intergenic |
| GATCGCCATTCGGTGAAAGA+AGG | 0.504459 | 5.2:+65691422 | None:intergenic |
| TCAACCGTAAACCCATAATT+CGG | 0.504889 | 5.2:+65691167 | None:intergenic |
| GGGGAAGATTGTTGAGAAGG+TGG | 0.507413 | 5.2:+65691443 | None:intergenic |
| AGAAGGTGGTGGTTGAGAAG+AGG | 0.512505 | 5.2:+65691457 | None:intergenic |
| GAAGGGGAAGATTGTTGAGA+AGG | 0.515350 | 5.2:+65691440 | None:intergenic |
| CTGTGTCACGTGGATCTACC+GGG | 0.516254 | 5.2:+65691378 | None:intergenic |
| AGAGGAAGAAGAGTAGTGAG+AGG | 0.529241 | 5.2:+65691475 | None:intergenic |
| AGGATAAAGTGCAGAAGGGA+AGG | 0.530862 | 5.2:-65688994 | MS.gene063617:CDS |
| TATGGGTTTACGGTTGAAGG+TGG | 0.532788 | 5.2:-65691161 | MS.gene063617:CDS |
| GAGTGTATAGAGAAAGAAGA+AGG | 0.534498 | 5.2:+65691520 | None:intergenic |
| ATCGCCATTCGGTGAAAGAA+GGG | 0.538930 | 5.2:+65691423 | None:intergenic |
| TGGAGACATCGTTGCGGTGA+AGG | 0.541140 | 5.2:-65688902 | MS.gene063617:CDS |
| AAGAACGGGTTGGCTTCCAA+TGG | 0.542982 | 5.2:-65688869 | MS.gene063617:CDS |
| AGAACGGGTTGGCTTCCAAT+GGG | 0.547699 | 5.2:-65688868 | MS.gene063617:CDS |
| GACACAGTCGGCGGCGCGTG+TGG | 0.550703 | 5.2:-65691362 | MS.gene063617:CDS |
| TGGCCCCAATTCCGACCCAT+TGG | 0.555109 | 5.2:+65688853 | None:intergenic |
| AGAACAAAATGCTTATTAGG+AGG | 0.561905 | 5.2:+65691125 | None:intergenic |
| GGAGCAGGATAAAGTGCAGA+AGG | 0.570200 | 5.2:-65688999 | MS.gene063617:intron |
| GAAGGTTAAGGGCTCAAGAA+CGG | 0.572064 | 5.2:-65688884 | MS.gene063617:CDS |
| ATAAAGTGCAGAAGGGAAGG+TGG | 0.575254 | 5.2:-65688991 | MS.gene063617:CDS |
| CGGGTTGGCTTCCAATGGGT+CGG | 0.583185 | 5.2:-65688864 | MS.gene063617:CDS |
| TTGAGGTTACGAGTAGTGAT+GGG | 0.583484 | 5.2:-65688786 | MS.gene063617:CDS |
| TTTGAACGAGGTCAGATCTG+TGG | 0.583854 | 5.2:-65691278 | MS.gene063617:CDS |
| TACGGAGACCTATCAAAAGC+CGG | 0.590522 | 5.2:-65691338 | MS.gene063617:CDS |
| ATCAAAAGCCGGTTACGGCA+TGG | 0.595697 | 5.2:-65691327 | MS.gene063617:CDS |
| TCACCGCAACGATGTCTCCA+TGG | 0.596378 | 5.2:+65688905 | None:intergenic |
| ACATGCCTCTTCAGTATCGT+AGG | 0.598128 | 5.2:-65691058 | MS.gene063617:intron |
| TTAAGGGCTCAAGAACGGGT+TGG | 0.598129 | 5.2:-65688879 | MS.gene063617:CDS |
| ATCTACCGGGGCGTAGTAGG+TGG | 0.607583 | 5.2:+65691391 | None:intergenic |
| GGTTACGGCATGGCAACTGT+TGG | 0.609475 | 5.2:-65691317 | MS.gene063617:CDS |
| GAAGATTGTTGAGAAGGTGG+TGG | 0.611367 | 5.2:+65691446 | None:intergenic |
| GGCGTAGTAGGTGGCGCGTG+CGG | 0.613506 | 5.2:+65691400 | None:intergenic |
| TATTACCTACGATACTGAAG+AGG | 0.624697 | 5.2:+65691053 | None:intergenic |
| GCGCCGCCGACTGTGTCACG+TGG | 0.625743 | 5.2:+65691368 | None:intergenic |
| GGTGTGTGGATGATTTAAAG+TGG | 0.628924 | 5.2:-65691238 | MS.gene063617:CDS |
| TCGCCATTCGGTGAAAGAAG+GGG | 0.643549 | 5.2:+65691424 | None:intergenic |
| GAGCAGGATAAAGTGCAGAA+GGG | 0.649937 | 5.2:-65688998 | MS.gene063617:intron |
| GTGCTTTGAATTACGGTGTG+TGG | 0.652130 | 5.2:-65691252 | MS.gene063617:CDS |
| AGTGAAGCTTTGTTTGAACG+AGG | 0.664292 | 5.2:-65691290 | MS.gene063617:CDS |
| TAGTGATGGGAAAACAGTCA+CGG | 0.670779 | 5.2:-65688773 | MS.gene063617:CDS |
| ACGCGCCACCTACTACGCCC+CGG | 0.682530 | 5.2:-65691396 | MS.gene063617:CDS |
| GTAGATCCACGTGACACAGT+CGG | 0.684257 | 5.2:-65691374 | MS.gene063617:CDS |
| TGTGTCACGTGGATCTACCG+GGG | 0.729868 | 5.2:+65691379 | None:intergenic |
| GATCCACGTGACACAGTCGG+CGG | 0.742025 | 5.2:-65691371 | MS.gene063617:CDS |
| TGGCCATGGAGACATCGTTG+CGG | 0.743278 | 5.2:-65688908 | MS.gene063617:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTCAAATTTAATGTT+TGG | - | chr5.2:65689612-65689631 | MS.gene063617:intron | 15.0% |
| !! | TATAGAATTTAATAGTATAC+TGG | - | chr5.2:65689654-65689673 | MS.gene063617:intron | 15.0% |
| !! | TATTCTACATGATTTAATAT+TGG | - | chr5.2:65691140-65691159 | MS.gene063617:CDS | 15.0% |
| !!! | ATATTTTTTTTAGAGAATGA+TGG | - | chr5.2:65690328-65690347 | MS.gene063617:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+GGG | + | chr5.2:65689408-65689427 | None:intergenic | 15.0% |
| !! | ATTACTAAAACTAGTATTCA+AGG | + | chr5.2:65689947-65689966 | None:intergenic | 20.0% |
| !!! | AATTGGTTAAATTTTTCCTA+TGG | - | chr5.2:65689694-65689713 | MS.gene063617:intron | 20.0% |
| !!! | GAATACTAGTTTTAGTAATA+AGG | - | chr5.2:65689948-65689967 | MS.gene063617:intron | 20.0% |
| !!! | GTCATTTTCTCAAATTATTA+TGG | + | chr5.2:65689409-65689428 | None:intergenic | 20.0% |
| ! | AATACAAAATCCCCTTAATT+TGG | + | chr5.2:65690458-65690477 | None:intergenic | 25.0% |
| ! | AATGAAATTCAAGTAGCAAA+TGG | - | chr5.2:65690198-65690217 | MS.gene063617:intron | 25.0% |
| ! | AATTCCTTTAGATAATGAGA+AGG | - | chr5.2:65690769-65690788 | MS.gene063617:intron | 25.0% |
| ! | ATACAAAATCCCCTTAATTT+GGG | + | chr5.2:65690457-65690476 | None:intergenic | 25.0% |
| ! | ATTCCTTTAGATAATGAGAA+GGG | - | chr5.2:65690770-65690789 | MS.gene063617:intron | 25.0% |
| ! | ATTCTTAAAGACGAAGTTAT+AGG | - | chr5.2:65689790-65689809 | MS.gene063617:intron | 25.0% |
| ! | GATAACATTGTATGAAGATA+AGG | + | chr5.2:65690732-65690751 | None:intergenic | 25.0% |
| ! | TTTAATAGTATACTGGAGTT+TGG | - | chr5.2:65689661-65689680 | MS.gene063617:intron | 25.0% |
| !! | TCAATTTTCCGTTAATTTTG+CGG | + | chr5.2:65691020-65691039 | None:intergenic | 25.0% |
| !! | TTTGAATTTTGTGTTCTGTT+TGG | - | chr5.2:65691218-65691237 | MS.gene063617:CDS | 25.0% |
| !! | TTTTCATGAAGATATTCCAT+AGG | + | chr5.2:65689713-65689732 | None:intergenic | 25.0% |
| AACAAAGCCTAAAGGAAAAT+AGG | - | chr5.2:65690563-65690582 | MS.gene063617:intron | 30.0% | |
| AAGCCAAGTATAGCTAATAA+AGG | - | chr5.2:65691073-65691092 | MS.gene063617:CDS | 30.0% | |
| ACAACTTCAATCATAAGTGT+CGG | - | chr5.2:65689513-65689532 | MS.gene063617:intron | 30.0% | |
| AGAACAAAATGCTTATTAGG+AGG | + | chr5.2:65689116-65689135 | None:intergenic | 30.0% | |
| CTTCATGCATAATACTCATT+CGG | - | chr5.2:65690049-65690068 | MS.gene063617:intron | 30.0% | |
| GAATTTCATTAGCACTAGAA+AGG | + | chr5.2:65690188-65690207 | None:intergenic | 30.0% | |
| GGAAGAACAAAATGCTTATT+AGG | + | chr5.2:65689119-65689138 | None:intergenic | 30.0% | |
| TCTATGTATCGAAGAATGTT+GGG | + | chr5.2:65690694-65690713 | None:intergenic | 30.0% | |
| TTATTCATCTTCTAACCACA+AGG | + | chr5.2:65691100-65691119 | None:intergenic | 30.0% | |
| TTGATTGTGACAAAACTTAG+AGG | - | chr5.2:65689552-65689571 | MS.gene063617:intron | 30.0% | |
| ! | CTACTATCCTATTTTCCTTT+AGG | + | chr5.2:65690573-65690592 | None:intergenic | 30.0% |
| ! | TACAAAATCCCCTTAATTTG+GGG | + | chr5.2:65690456-65690475 | None:intergenic | 30.0% |
| !! | AGTTTGGCTTGTTTATGAAT+TGG | - | chr5.2:65689677-65689696 | MS.gene063617:intron | 30.0% |
| !! | ATCTTCTCAAAAGCATCAAT+AGG | + | chr5.2:65689140-65689159 | None:intergenic | 30.0% |
| AATTATGGGTTTACGGTTGA+AGG | - | chr5.2:65689074-65689093 | MS.gene063617:intron | 35.0% | |
| ACCATTGTCTAGCAAAATCT+CGG | - | chr5.2:65689999-65690018 | MS.gene063617:intron | 35.0% | |
| ATAGCTAATAAAGGACCTTG+TGG | - | chr5.2:65691082-65691101 | MS.gene063617:CDS | 35.0% | |
| ATCAAATTGCTTCCCTTCAA+AGG | + | chr5.2:65691530-65691549 | None:intergenic | 35.0% | |
| CAAGTAGCAAATGGATGATA+GGG | - | chr5.2:65690207-65690226 | MS.gene063617:intron | 35.0% | |
| CTAGCAAGTATATTAGAGCT+GGG | - | chr5.2:65690933-65690952 | MS.gene063617:intron | 35.0% | |
| CTCTATGTATCGAAGAATGT+TGG | + | chr5.2:65690695-65690714 | None:intergenic | 35.0% | |
| GAATCAACCTCTTTCATTTG+AGG | - | chr5.2:65691435-65691454 | MS.gene063617:CDS | 35.0% | |
| GAGTAAGTGGAAGAAATAGT+GGG | + | chr5.2:65690506-65690525 | None:intergenic | 35.0% | |
| GAGTGTATAGAGAAAGAAGA+AGG | + | chr5.2:65688721-65688740 | None:intergenic | 35.0% | |
| GCATAAAGTTCCAAAGAGAA+AGG | + | chr5.2:65690118-65690137 | None:intergenic | 35.0% | |
| GGAAAAGACCGCAAAATTAA+CGG | - | chr5.2:65691009-65691028 | MS.gene063617:intron | 35.0% | |
| GGTCCTTTATTAGCTATACT+TGG | + | chr5.2:65691079-65691098 | None:intergenic | 35.0% | |
| GTAACAATAATCGAAGTTCC+AGG | + | chr5.2:65689032-65689051 | None:intergenic | 35.0% | |
| GTAGAATAGTGACAGCTTAT+GGG | + | chr5.2:65691128-65691147 | None:intergenic | 35.0% | |
| GTTCCCTTCTCATTATCTAA+AGG | + | chr5.2:65690776-65690795 | None:intergenic | 35.0% | |
| TAATGATTGTTGATCGTTGC+CGG | - | chr5.2:65689350-65689369 | MS.gene063617:intron | 35.0% | |
| TAGAATAGTGACAGCTTATG+GGG | + | chr5.2:65691127-65691146 | None:intergenic | 35.0% | |
| TATTACCTACGATACTGAAG+AGG | + | chr5.2:65689188-65689207 | None:intergenic | 35.0% | |
| TCAACCGTAAACCCATAATT+CGG | + | chr5.2:65689074-65689093 | None:intergenic | 35.0% | |
| TCAAGTAGCAAATGGATGAT+AGG | - | chr5.2:65690206-65690225 | MS.gene063617:intron | 35.0% | |
| TCTAGCAAAATCTCGGTAAT+TGG | - | chr5.2:65690006-65690025 | MS.gene063617:intron | 35.0% | |
| TGTAGAATAGTGACAGCTTA+TGG | + | chr5.2:65691129-65691148 | None:intergenic | 35.0% | |
| TGTCCAAAACTCCAATCTTT+GGG | + | chr5.2:65691505-65691524 | None:intergenic | 35.0% | |
| TTGTCCAAAACTCCAATCTT+TGG | + | chr5.2:65691506-65691525 | None:intergenic | 35.0% | |
| ! | ACAAAATCCCCTTAATTTGG+GGG | + | chr5.2:65690455-65690474 | None:intergenic | 35.0% |
| ! | ATTTTGCTAGACAATGGTAG+AGG | + | chr5.2:65689997-65690016 | None:intergenic | 35.0% |
| ! | GATTTAAAGTGGTGTATTCC+TGG | - | chr5.2:65689011-65689030 | MS.gene063617:intron | 35.0% |
| ! | GTTAATTTTGCGGTCTTTTC+CGG | + | chr5.2:65691010-65691029 | None:intergenic | 35.0% |
| !! | CTTTTGAGAAGATCGCTATT+TGG | - | chr5.2:65689147-65689166 | MS.gene063617:intron | 35.0% |
| !! | GTTTTGGACAAACCTTTGAA+GGG | - | chr5.2:65691515-65691534 | MS.gene063617:CDS | 35.0% |
| !!! | AGTTTTGGACAAACCTTTGA+AGG | - | chr5.2:65691514-65691533 | MS.gene063617:CDS | 35.0% |
| AAGATCGCTATTTGGAAAGC+TGG | - | chr5.2:65689155-65689174 | MS.gene063617:intron | 40.0% | |
| AATTTCTGTGCGCCGAATTA+TGG | - | chr5.2:65689059-65689078 | MS.gene063617:intron | 40.0% | |
| ACAATGTTGCTCCCAAAGAT+TGG | - | chr5.2:65691491-65691510 | MS.gene063617:CDS | 40.0% | |
| AGAAGAGTAGTGAGAGGTTA+CGG | + | chr5.2:65688760-65688779 | None:intergenic | 40.0% | |
| AGACCGTGTACTAAATAGAC+TGG | - | chr5.2:65690983-65691002 | MS.gene063617:intron | 40.0% | |
| AGTATGCACACCTTTCTCTT+TGG | - | chr5.2:65690105-65690124 | MS.gene063617:intron | 40.0% | |
| ATTTCTGTGCGCCGAATTAT+GGG | - | chr5.2:65689060-65689079 | MS.gene063617:intron | 40.0% | |
| ATTTGAGTCCCCCCAAATTA+AGG | - | chr5.2:65690443-65690462 | MS.gene063617:intron | 40.0% | |
| CAGAACCAGTGACAGTAAAT+CGG | + | chr5.2:65691276-65691295 | None:intergenic | 40.0% | |
| CCAGTTTGGCATACTCATAA+TGG | + | chr5.2:65690641-65690660 | None:intergenic | 40.0% | |
| CCATTATGAGTATGCCAAAC+TGG | - | chr5.2:65690638-65690657 | MS.gene063617:intron | 40.0% | |
| CTATTTAGTACACGGTCTGA+AGG | + | chr5.2:65690981-65691000 | None:intergenic | 40.0% | |
| CTCGTAACCTCAAATGAAAG+AGG | + | chr5.2:65691445-65691464 | None:intergenic | 40.0% | |
| GAGTGAGAGACAAAGTCTAT+AGG | - | chr5.2:65689812-65689831 | MS.gene063617:intron | 40.0% | |
| GCTAGCAAGTATATTAGAGC+TGG | - | chr5.2:65690932-65690951 | MS.gene063617:intron | 40.0% | |
| GGAGTAAGTGGAAGAAATAG+TGG | + | chr5.2:65690507-65690526 | None:intergenic | 40.0% | |
| GGGACTCAAATTGTATTGGA+GGG | + | chr5.2:65690434-65690453 | None:intergenic | 40.0% | |
| GGTCCAGTCTATTTAGTACA+CGG | + | chr5.2:65690989-65691008 | None:intergenic | 40.0% | |
| GGTGTGTGGATGATTTAAAG+TGG | - | chr5.2:65689000-65689019 | MS.gene063617:intron | 40.0% | |
| GTGTACTAAATAGACTGGAC+CGG | - | chr5.2:65690988-65691007 | MS.gene063617:intron | 40.0% | |
| TAGACAATGGTAGAGGATCA+TGG | + | chr5.2:65689990-65690009 | None:intergenic | 40.0% | |
| TTATTATGGGTCTTGACGTG+TGG | + | chr5.2:65689395-65689414 | None:intergenic | 40.0% | |
| TTGAGGTTACGAGTAGTGAT+GGG | - | chr5.2:65691452-65691471 | MS.gene063617:CDS | 40.0% | |
| TTTGAGGGGTGGGAAATATA+GGG | - | chr5.2:65690269-65690288 | MS.gene063617:intron | 40.0% | |
| TTTGAGTCCCCCCAAATTAA+GGG | - | chr5.2:65690444-65690463 | MS.gene063617:intron | 40.0% | |
| ! | AAGAGAAAGGTGTGCATACT+CGG | + | chr5.2:65690105-65690124 | None:intergenic | 40.0% |
| ! | ACCGAGATTTTGCTAGACAA+TGG | + | chr5.2:65690003-65690022 | None:intergenic | 40.0% |
| ! | ACGCGTTTATATGCCAGTTT+TGG | + | chr5.2:65691408-65691427 | None:intergenic | 40.0% |
| ! | CAAAATCCCCTTAATTTGGG+GGG | + | chr5.2:65690454-65690473 | None:intergenic | 40.0% |
| ! | GCTCTAAACGAAAGAGTAGT+TGG | + | chr5.2:65689219-65689238 | None:intergenic | 40.0% |
| ! | TAGTGATGGGAAAACAGTCA+CGG | - | chr5.2:65691465-65691484 | MS.gene063617:CDS | 40.0% |
| ! | TTTGAGGTTACGAGTAGTGA+TGG | - | chr5.2:65691451-65691470 | MS.gene063617:CDS | 40.0% |
| !! | AGTGAAGCTTTGTTTGAACG+AGG | - | chr5.2:65688948-65688967 | MS.gene063617:CDS | 40.0% |
| !! | TGGAAGAAATAGTGGGCTTT+GGG | + | chr5.2:65690499-65690518 | None:intergenic | 40.0% |
| !! | TTTTGTGTTCTGTTTGGAGC+AGG | - | chr5.2:65691224-65691243 | MS.gene063617:CDS | 40.0% |
| AAGGTTAAGGGCTCAAGAAC+GGG | - | chr5.2:65691355-65691374 | MS.gene063617:CDS | 45.0% | |
| ACACTCTGACACATGTTGGA+TGG | - | chr5.2:65689473-65689492 | MS.gene063617:intron | 45.0% | |
| ACATGCCTCTTCAGTATCGT+AGG | - | chr5.2:65689180-65689199 | MS.gene063617:intron | 45.0% | |
| AGAGGAAGAAGAGTAGTGAG+AGG | + | chr5.2:65688766-65688785 | None:intergenic | 45.0% | |
| AGGATAAAGTGCAGAAGGGA+AGG | - | chr5.2:65691244-65691263 | MS.gene063617:CDS | 45.0% | |
| AGTTTCAGTAGTACGAGCAC+AGG | + | chr5.2:65691043-65691062 | None:intergenic | 45.0% | |
| ATAAAGTGCAGAAGGGAAGG+TGG | - | chr5.2:65691247-65691266 | MS.gene063617:CDS | 45.0% | |
| ATCGTTGCGGTGAAGGTTAA+GGG | - | chr5.2:65691343-65691362 | MS.gene063617:CDS | 45.0% | |
| CACAACACTCTGACACATGT+TGG | - | chr5.2:65689469-65689488 | MS.gene063617:intron | 45.0% | |
| GAAGATTGTTGAGAAGGTGG+TGG | + | chr5.2:65688795-65688814 | None:intergenic | 45.0% | |
| GAAGGGGAAGATTGTTGAGA+AGG | + | chr5.2:65688801-65688820 | None:intergenic | 45.0% | |
| GAAGGTTAAGGGCTCAAGAA+CGG | - | chr5.2:65691354-65691373 | MS.gene063617:CDS | 45.0% | |
| GACCTATCAAAAGCCGGTTA+CGG | - | chr5.2:65688906-65688925 | MS.gene063617:CDS | 45.0% | |
| GAGCAGGATAAAGTGCAGAA+GGG | - | chr5.2:65691240-65691259 | MS.gene063617:CDS | 45.0% | |
| GAGGACTTTGGCAAAAAGGA+CGG | + | chr5.2:65690528-65690547 | None:intergenic | 45.0% | |
| GCAAATGGATGATAGGGACT+AGG | - | chr5.2:65690213-65690232 | MS.gene063617:intron | 45.0% | |
| GCTCGTACTACTGAAACTGT+CGG | - | chr5.2:65691045-65691064 | MS.gene063617:intron | 45.0% | |
| GGGGACTCAAATTGTATTGG+AGG | + | chr5.2:65690435-65690454 | None:intergenic | 45.0% | |
| GTCTCGCAAACAAAGCCTAA+AGG | - | chr5.2:65690555-65690574 | MS.gene063617:intron | 45.0% | |
| GTGGGAAATATAGGGGGAAA+TGG | - | chr5.2:65690277-65690296 | MS.gene063617:intron | 45.0% | |
| TACGGAGACCTATCAAAAGC+CGG | - | chr5.2:65688900-65688919 | MS.gene063617:CDS | 45.0% | |
| TATGGGTTTACGGTTGAAGG+TGG | - | chr5.2:65689077-65689096 | MS.gene063617:intron | 45.0% | |
| TGATCGTTGCCGGTGTTTAA+CGG | - | chr5.2:65689360-65689379 | MS.gene063617:intron | 45.0% | |
| TGCGCCGAATTATGGGTTTA+CGG | - | chr5.2:65689067-65689086 | MS.gene063617:intron | 45.0% | |
| TGGGGGGACTCAAATTGTAT+TGG | + | chr5.2:65690438-65690457 | None:intergenic | 45.0% | |
| TGTTAGGGTCCGTTAAACAC+CGG | + | chr5.2:65689372-65689391 | None:intergenic | 45.0% | |
| TTGAGGGGTGGGAAATATAG+GGG | - | chr5.2:65690270-65690289 | MS.gene063617:intron | 45.0% | |
| TTGAGTCCCCCCAAATTAAG+GGG | - | chr5.2:65690445-65690464 | MS.gene063617:intron | 45.0% | |
| TTTGAACGAGGTCAGATCTG+TGG | - | chr5.2:65688960-65688979 | MS.gene063617:CDS | 45.0% | |
| ! | ATCGCCATTCGGTGAAAGAA+GGG | + | chr5.2:65688818-65688837 | None:intergenic | 45.0% |
| ! | CTTTGAGGGGTGGGAAATAT+AGG | - | chr5.2:65690268-65690287 | MS.gene063617:intron | 45.0% |
| ! | GCTCCCAAAGATTGGAGTTT+TGG | - | chr5.2:65691499-65691518 | MS.gene063617:CDS | 45.0% |
| ! | GTGCTTTGAATTACGGTGTG+TGG | - | chr5.2:65688986-65689005 | MS.gene063617:CDS | 45.0% |
| !! | AAGAAATAGTGGGCTTTGGG+GGG | + | chr5.2:65690496-65690515 | None:intergenic | 45.0% |
| !! | CGATTTACTGTCACTGGTTC+TGG | - | chr5.2:65691274-65691293 | MS.gene063617:CDS | 45.0% |
| !! | CTAGGCTTTGTTTGCGAGTT+CGG | - | chr5.2:65690231-65690250 | MS.gene063617:intron | 45.0% |
| !! | GAAGAAATAGTGGGCTTTGG+GGG | + | chr5.2:65690497-65690516 | None:intergenic | 45.0% |
| !! | GGAAGAAATAGTGGGCTTTG+GGG | + | chr5.2:65690498-65690517 | None:intergenic | 45.0% |
| !! | GTGGAAGAAATAGTGGGCTT+TGG | + | chr5.2:65690500-65690519 | None:intergenic | 45.0% |
| !! | TTAGGCTTTGTTTGCGAGAC+TGG | + | chr5.2:65690555-65690574 | None:intergenic | 45.0% |
| AACAGTTGCCATGCCGTAAC+CGG | + | chr5.2:65688922-65688941 | None:intergenic | 50.0% | |
| ACTGTGTCACGTGGATCTAC+CGG | + | chr5.2:65688864-65688883 | None:intergenic | 50.0% | |
| AGGGGAGGACTTTGGCAAAA+AGG | + | chr5.2:65690532-65690551 | None:intergenic | 50.0% | |
| ATCAAAAGCCGGTTACGGCA+TGG | - | chr5.2:65688911-65688930 | MS.gene063617:CDS | 50.0% | |
| ATCAGCAATGTTGCTGGCCA+TGG | - | chr5.2:65691316-65691335 | MS.gene063617:CDS | 50.0% | |
| ATGTTGGATGGACACCTGAC+AGG | - | chr5.2:65689485-65689504 | MS.gene063617:intron | 50.0% | |
| CATCGTTGCGGTGAAGGTTA+AGG | - | chr5.2:65691342-65691361 | MS.gene063617:CDS | 50.0% | |
| CTTCCAATGGGTCGGAATTG+GGG | - | chr5.2:65691382-65691401 | MS.gene063617:CDS | 50.0% | |
| CTTCCCCTTCTTTCACCGAA+TGG | - | chr5.2:65688811-65688830 | MS.gene063617:CDS | 50.0% | |
| GCTTCCAATGGGTCGGAATT+GGG | - | chr5.2:65691381-65691400 | MS.gene063617:CDS | 50.0% | |
| GGAGCAGGATAAAGTGCAGA+AGG | - | chr5.2:65691239-65691258 | MS.gene063617:CDS | 50.0% | |
| GGAGTCCGATTTACTGTCAC+TGG | - | chr5.2:65691268-65691287 | MS.gene063617:CDS | 50.0% | |
| GGCAAAAAGGACGGAGTAAG+TGG | + | chr5.2:65690519-65690538 | None:intergenic | 50.0% | |
| GGGGAAGATTGTTGAGAAGG+TGG | + | chr5.2:65688798-65688817 | None:intergenic | 50.0% | |
| GTAGATCCACGTGACACAGT+CGG | - | chr5.2:65688864-65688883 | MS.gene063617:CDS | 50.0% | |
| TGAAGTTGTGTCAGCCTGTC+AGG | + | chr5.2:65689502-65689521 | None:intergenic | 50.0% | |
| TGAGGGGTGGGAAATATAGG+GGG | - | chr5.2:65690271-65690290 | MS.gene063617:intron | 50.0% | |
| TTAAGGGCTCAAGAACGGGT+TGG | - | chr5.2:65691359-65691378 | MS.gene063617:CDS | 50.0% | |
| ! | AGAAAGGTGTGCATACTCGG+AGG | + | chr5.2:65690102-65690121 | None:intergenic | 50.0% |
| ! | AGAAGGTGGTGGTTGAGAAG+AGG | + | chr5.2:65688784-65688803 | None:intergenic | 50.0% |
| ! | CTTTGTTTGCGAGACTGGAG+GGG | + | chr5.2:65690550-65690569 | None:intergenic | 50.0% |
| ! | CTTTGTTTGCGAGTTCGGAG+GGG | - | chr5.2:65690236-65690255 | MS.gene063617:intron | 50.0% |
| ! | GATCGCCATTCGGTGAAAGA+AGG | + | chr5.2:65688819-65688838 | None:intergenic | 50.0% |
| ! | GGTCTTGACGTGTGGTGTTA+GGG | + | chr5.2:65689387-65689406 | None:intergenic | 50.0% |
| ! | GTGCTGATCAGCAATGTTGC+TGG | - | chr5.2:65691310-65691329 | MS.gene063617:CDS | 50.0% |
| ! | GTGGCGCGTGCTTTGAATTA+CGG | - | chr5.2:65688979-65688998 | MS.gene063617:CDS | 50.0% |
| ! | TCGCCATTCGGTGAAAGAAG+GGG | + | chr5.2:65688817-65688836 | None:intergenic | 50.0% |
| !! | AAGAACGGGTTGGCTTCCAA+TGG | - | chr5.2:65691369-65691388 | MS.gene063617:CDS | 50.0% |
| !! | AGAACGGGTTGGCTTCCAAT+GGG | - | chr5.2:65691370-65691389 | MS.gene063617:CDS | 50.0% |
| !! | GCTTTGTTTGCGAGACTGGA+GGG | + | chr5.2:65690551-65690570 | None:intergenic | 50.0% |
| !! | GCTTTGTTTGCGAGTTCGGA+GGG | - | chr5.2:65690235-65690254 | MS.gene063617:intron | 50.0% |
| !! | TGCCGTAACCGGCTTTTGAT+AGG | + | chr5.2:65688911-65688930 | None:intergenic | 50.0% |
| CGTCTCATCAGCTGCCAGTT+TGG | + | chr5.2:65690655-65690674 | None:intergenic | 55.0% | |
| CTGTGTCACGTGGATCTACC+GGG | + | chr5.2:65688863-65688882 | None:intergenic | 55.0% | |
| GGAGGAGCAGTCAAGTGGTA+TGG | + | chr5.2:65690084-65690103 | None:intergenic | 55.0% | |
| GGCTTCCAATGGGTCGGAAT+TGG | - | chr5.2:65691380-65691399 | MS.gene063617:CDS | 55.0% | |
| GGGTCTTGACGTGTGGTGTT+AGG | + | chr5.2:65689388-65689407 | None:intergenic | 55.0% | |
| GGGTTTACGGTTGAAGGTGG+TGG | - | chr5.2:65689080-65689099 | MS.gene063617:intron | 55.0% | |
| GGTTACGGCATGGCAACTGT+TGG | - | chr5.2:65688921-65688940 | MS.gene063617:CDS | 55.0% | |
| GTCGGAATTGGGGCCAAAAC+TGG | - | chr5.2:65691392-65691411 | MS.gene063617:CDS | 55.0% | |
| TACTCGGAGGAGCAGTCAAG+TGG | + | chr5.2:65690089-65690108 | None:intergenic | 55.0% | |
| TCACCGCAACGATGTCTCCA+TGG | + | chr5.2:65691336-65691355 | None:intergenic | 55.0% | |
| TGGAGACATCGTTGCGGTGA+AGG | - | chr5.2:65691336-65691355 | MS.gene063617:CDS | 55.0% | |
| TGGCCATGGAGACATCGTTG+CGG | - | chr5.2:65691330-65691349 | MS.gene063617:CDS | 55.0% | |
| TGTGTCACGTGGATCTACCG+GGG | + | chr5.2:65688862-65688881 | None:intergenic | 55.0% | |
| TTTGCGAGTTCGGAGGGGAA+GGG | - | chr5.2:65690241-65690260 | MS.gene063617:intron | 55.0% | |
| !! | GGCTTTGTTTGCGAGACTGG+AGG | + | chr5.2:65690552-65690571 | None:intergenic | 55.0% |
| !! | GGCTTTGTTTGCGAGTTCGG+AGG | - | chr5.2:65690234-65690253 | MS.gene063617:intron | 55.0% |
| ATCTACCGGGGCGTAGTAGG+TGG | + | chr5.2:65688850-65688869 | None:intergenic | 60.0% | |
| GAGACTGGAGGGGAGGACTT+TGG | + | chr5.2:65690540-65690559 | None:intergenic | 60.0% | |
| GATCCACGTGACACAGTCGG+CGG | - | chr5.2:65688867-65688886 | MS.gene063617:CDS | 60.0% | |
| GTTTGCGAGTTCGGAGGGGA+AGG | - | chr5.2:65690240-65690259 | MS.gene063617:intron | 60.0% | |
| TAGAGCTGGGTGTGCACTGC+AGG | - | chr5.2:65690946-65690965 | MS.gene063617:intron | 60.0% | |
| TGGATCTACCGGGGCGTAGT+AGG | + | chr5.2:65688853-65688872 | None:intergenic | 60.0% | |
| TGGCCCCAATTCCGACCCAT+TGG | + | chr5.2:65691388-65691407 | None:intergenic | 60.0% | |
| TGTTTGCGAGACTGGAGGGG+AGG | + | chr5.2:65690547-65690566 | None:intergenic | 60.0% | |
| ! | AGGGGAAGGGAGGGCTTTGA+GGG | - | chr5.2:65690254-65690273 | MS.gene063617:intron | 60.0% |
| !! | AAGGGAGGGCTTTGAGGGGT+GGG | - | chr5.2:65690259-65690278 | MS.gene063617:intron | 60.0% |
| !! | CGGGTTGGCTTCCAATGGGT+CGG | - | chr5.2:65691374-65691393 | MS.gene063617:CDS | 60.0% |
| CGAGTTCGGAGGGGAAGGGA+GGG | - | chr5.2:65690245-65690264 | MS.gene063617:intron | 65.0% | |
| GAGGGGAAGGGAGGGCTTTG+AGG | - | chr5.2:65690253-65690272 | MS.gene063617:intron | 65.0% | |
| !! | GAAGGGAGGGCTTTGAGGGG+TGG | - | chr5.2:65690258-65690277 | MS.gene063617:intron | 65.0% |
| !! | GGGGAAGGGAGGGCTTTGAG+GGG | - | chr5.2:65690255-65690274 | MS.gene063617:intron | 65.0% |
| ACGCGCCACCTACTACGCCC+CGG | - | chr5.2:65688842-65688861 | MS.gene063617:CDS | 70.0% | |
| GCGAGTTCGGAGGGGAAGGG+AGG | - | chr5.2:65690244-65690263 | MS.gene063617:intron | 70.0% | |
| GGCGCGTGCGGATCGCCATT+CGG | + | chr5.2:65688829-65688848 | None:intergenic | 70.0% | |
| GGCGTAGTAGGTGGCGCGTG+CGG | + | chr5.2:65688841-65688860 | None:intergenic | 70.0% | |
| GACACAGTCGGCGGCGCGTG+TGG | - | chr5.2:65688876-65688895 | MS.gene063617:CDS | 75.0% | |
| GTCGGCGGCGCGTGTGGCTA+CGG | - | chr5.2:65688882-65688901 | MS.gene063617:CDS | 75.0% | |
| ! | GCGCCGCCGACTGTGTCACG+TGG | + | chr5.2:65688873-65688892 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 65688705 | 65691555 | 65688705 | ID=MS.gene063617 |
| chr5.2 | mRNA | 65688705 | 65691555 | 65688705 | ID=MS.gene063617.t1;Parent=MS.gene063617 |
| chr5.2 | exon | 65691059 | 65691555 | 65691059 | ID=MS.gene063617.t1.exon1;Parent=MS.gene063617.t1 |
| chr5.2 | CDS | 65691059 | 65691555 | 65691059 | ID=cds.MS.gene063617.t1;Parent=MS.gene063617.t1 |
| chr5.2 | exon | 65688705 | 65689014 | 65688705 | ID=MS.gene063617.t1.exon2;Parent=MS.gene063617.t1 |
| chr5.2 | CDS | 65688705 | 65689014 | 65688705 | ID=cds.MS.gene063617.t1;Parent=MS.gene063617.t1 |
| Gene Sequence |
| Protein sequence |