Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056188.t1 | XP_003627756.1 | 93.7 | 431 | 27 | 0 | 1 | 431 | 1 | 431 | 1.60E-240 | 841.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056188.t1 | A8MRX0 | 53.1 | 424 | 194 | 2 | 2 | 420 | 11 | 434 | 1.6e-132 | 474.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056188.t1 | G7LEJ7 | 93.7 | 431 | 27 | 0 | 1 | 431 | 1 | 431 | 1.1e-240 | 841.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056187 | MS.gene056188 | 0.842176 | 3.03E-58 | -1.69E-46 |
| MS.gene056188 | MS.gene056857 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene056188 | MS.gene35208 | 0.800617 | 1.33E-48 | -1.69E-46 |
| MS.gene056188 | MS.gene38116 | 0.806799 | 6.90E-50 | -1.69E-46 |
| MS.gene056188 | MS.gene41633 | -0.839602 | 1.44E-57 | -1.69E-46 |
| MS.gene056188 | MS.gene42636 | -0.815793 | 7.70E-52 | -1.69E-46 |
| MS.gene056188 | MS.gene66463 | 0.808874 | 2.50E-50 | -1.69E-46 |
| MS.gene056188 | MS.gene87582 | 0.807746 | 4.35E-50 | -1.69E-46 |
| MS.gene056188 | MS.gene92392 | 0.814853 | 1.25E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056188.t1 | MTR_8g037910 | 93.735 | 431 | 27 | 0 | 1 | 431 | 1 | 431 | 0.0 | 845 |
| MS.gene056188.t1 | MTR_8g037880 | 86.574 | 432 | 57 | 1 | 1 | 431 | 1 | 432 | 0.0 | 778 |
| MS.gene056188.t1 | MTR_8g037910 | 93.769 | 321 | 19 | 1 | 1 | 320 | 1 | 321 | 0.0 | 619 |
| MS.gene056188.t1 | MTR_8g037910 | 94.118 | 272 | 16 | 0 | 1 | 272 | 1 | 272 | 0.0 | 532 |
| MS.gene056188.t1 | MTR_5g012130 | 51.972 | 431 | 196 | 5 | 4 | 426 | 13 | 440 | 4.28e-150 | 434 |
| MS.gene056188.t1 | MTR_3g437580 | 42.212 | 443 | 232 | 9 | 4 | 431 | 13 | 446 | 7.69e-115 | 344 |
| MS.gene056188.t1 | MTR_5g012130 | 55.031 | 318 | 139 | 3 | 4 | 317 | 33 | 350 | 1.00e-114 | 340 |
| MS.gene056188.t1 | MTR_3g437580 | 44.615 | 325 | 164 | 6 | 4 | 313 | 13 | 336 | 6.69e-91 | 279 |
| MS.gene056188.t1 | MTR_5g012130 | 51.210 | 248 | 117 | 3 | 4 | 247 | 33 | 280 | 1.52e-73 | 232 |
| MS.gene056188.t1 | MTR_3g109520 | 28.571 | 210 | 120 | 6 | 6 | 211 | 41 | 224 | 2.05e-17 | 84.3 |
| MS.gene056188.t1 | MTR_2g450510 | 27.668 | 253 | 125 | 8 | 3 | 221 | 4 | 232 | 1.14e-16 | 82.4 |
| MS.gene056188.t1 | MTR_2g450310 | 27.668 | 253 | 125 | 8 | 3 | 221 | 4 | 232 | 2.94e-16 | 81.3 |
| MS.gene056188.t1 | MTR_7g107710 | 26.168 | 214 | 125 | 5 | 4 | 211 | 6 | 192 | 3.21e-15 | 77.4 |
| MS.gene056188.t1 | MTR_2g044140 | 27.885 | 208 | 98 | 7 | 3 | 183 | 13 | 195 | 1.86e-14 | 75.5 |
| MS.gene056188.t1 | MTR_1g011630 | 24.038 | 208 | 128 | 6 | 6 | 211 | 18 | 197 | 2.21e-14 | 75.1 |
| MS.gene056188.t1 | MTR_7g107690 | 25.106 | 235 | 142 | 5 | 3 | 230 | 7 | 214 | 3.64e-14 | 73.9 |
| MS.gene056188.t1 | MTR_1g069275 | 24.413 | 213 | 124 | 5 | 6 | 211 | 27 | 209 | 2.25e-13 | 72.0 |
| MS.gene056188.t1 | MTR_5g033260 | 24.880 | 209 | 131 | 4 | 4 | 210 | 6 | 190 | 2.48e-12 | 68.6 |
| MS.gene056188.t1 | MTR_1g008380 | 24.880 | 209 | 128 | 6 | 6 | 211 | 44 | 226 | 1.59e-11 | 66.2 |
| MS.gene056188.t1 | MTR_8g432640 | 22.667 | 225 | 147 | 5 | 4 | 226 | 6 | 205 | 2.82e-11 | 65.1 |
| MS.gene056188.t1 | MTR_1088s0010 | 28.462 | 130 | 69 | 3 | 3 | 132 | 4 | 109 | 3.17e-11 | 61.6 |
| MS.gene056188.t1 | MTR_7g099330 | 21.845 | 206 | 133 | 3 | 6 | 211 | 26 | 203 | 4.56e-11 | 64.7 |
| MS.gene056188.t1 | MTR_6g086870 | 24.645 | 211 | 130 | 4 | 6 | 211 | 22 | 208 | 7.14e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056188.t1 | AT1G62620 | 52.941 | 425 | 192 | 3 | 4 | 420 | 13 | 437 | 8.02e-159 | 456 |
| MS.gene056188.t1 | AT1G63370 | 52.471 | 425 | 194 | 3 | 4 | 420 | 13 | 437 | 6.15e-157 | 451 |
| MS.gene056188.t1 | AT1G12140 | 53.066 | 424 | 194 | 2 | 2 | 420 | 11 | 434 | 1.93e-156 | 450 |
| MS.gene056188.t1 | AT1G12140 | 53.066 | 424 | 194 | 2 | 2 | 420 | 11 | 434 | 1.93e-156 | 450 |
| MS.gene056188.t1 | AT1G12200 | 53.738 | 428 | 186 | 4 | 4 | 420 | 14 | 440 | 2.39e-156 | 450 |
| MS.gene056188.t1 | AT1G12140 | 52.594 | 424 | 194 | 3 | 2 | 420 | 11 | 432 | 4.98e-153 | 441 |
| MS.gene056188.t1 | AT1G62600 | 52.225 | 427 | 194 | 3 | 4 | 420 | 13 | 439 | 6.99e-152 | 438 |
| MS.gene056188.t1 | AT1G12160 | 49.658 | 439 | 195 | 6 | 4 | 419 | 12 | 447 | 4.03e-148 | 429 |
| MS.gene056188.t1 | AT1G62580 | 52.471 | 425 | 193 | 4 | 4 | 420 | 14 | 437 | 1.83e-147 | 427 |
| MS.gene056188.t1 | AT1G65860 | 49.644 | 421 | 207 | 3 | 4 | 419 | 13 | 433 | 2.41e-146 | 424 |
| MS.gene056188.t1 | AT1G62540 | 51.544 | 421 | 199 | 3 | 4 | 419 | 13 | 433 | 2.99e-146 | 424 |
| MS.gene056188.t1 | AT1G62560 | 48.585 | 424 | 208 | 5 | 4 | 419 | 13 | 434 | 8.16e-146 | 423 |
| MS.gene056188.t1 | AT1G62620 | 55.200 | 375 | 160 | 3 | 4 | 370 | 13 | 387 | 2.00e-145 | 420 |
| MS.gene056188.t1 | AT1G12130 | 50.444 | 450 | 191 | 8 | 4 | 428 | 13 | 455 | 3.26e-143 | 417 |
| MS.gene056188.t1 | AT1G62540 | 48.655 | 446 | 199 | 4 | 4 | 419 | 13 | 458 | 9.00e-142 | 414 |
| MS.gene056188.t1 | AT1G62570 | 50.591 | 423 | 200 | 4 | 4 | 419 | 13 | 433 | 1.05e-140 | 410 |
| MS.gene056188.t1 | AT1G62580 | 48.908 | 458 | 192 | 7 | 4 | 420 | 14 | 470 | 2.67e-139 | 408 |
| MS.gene056188.t1 | AT1G62600 | 54.111 | 377 | 163 | 3 | 4 | 370 | 13 | 389 | 3.20e-138 | 401 |
| MS.gene056188.t1 | AT1G63340 | 48.700 | 423 | 172 | 4 | 4 | 420 | 14 | 397 | 1.12e-134 | 394 |
| MS.gene056188.t1 | AT1G62560 | 50.660 | 379 | 177 | 5 | 4 | 374 | 13 | 389 | 1.80e-134 | 392 |
| MS.gene056188.t1 | AT1G62540 | 49.169 | 421 | 191 | 5 | 4 | 419 | 13 | 415 | 1.20e-133 | 392 |
| MS.gene056188.t1 | AT5G61290 | 45.476 | 431 | 215 | 5 | 4 | 419 | 16 | 441 | 2.90e-125 | 371 |
| MS.gene056188.t1 | AT1G63370 | 56.037 | 323 | 134 | 3 | 4 | 318 | 13 | 335 | 2.94e-124 | 364 |
| MS.gene056188.t1 | AT1G12200 | 57.585 | 323 | 126 | 3 | 4 | 316 | 14 | 335 | 1.74e-121 | 358 |
| MS.gene056188.t1 | AT5G07800 | 43.287 | 432 | 227 | 7 | 3 | 419 | 15 | 443 | 4.47e-117 | 350 |
| MS.gene056188.t1 | AT1G62580 | 55.287 | 331 | 130 | 3 | 4 | 316 | 14 | 344 | 5.31e-113 | 336 |
| MS.gene056188.t1 | AT1G63390 | 60.140 | 143 | 49 | 2 | 4 | 138 | 13 | 155 | 2.72e-43 | 150 |
| MS.gene056188.t1 | AT5G45180 | 25.208 | 480 | 234 | 23 | 3 | 389 | 12 | 459 | 6.73e-19 | 89.0 |
| MS.gene056188.t1 | AT1G19250 | 29.876 | 241 | 113 | 8 | 3 | 211 | 12 | 228 | 7.66e-17 | 83.2 |
| MS.gene056188.t1 | AT4G13260 | 23.558 | 208 | 133 | 4 | 6 | 211 | 30 | 213 | 3.92e-13 | 70.5 |
| MS.gene056188.t1 | AT4G13260 | 23.558 | 208 | 133 | 4 | 6 | 211 | 30 | 213 | 8.78e-13 | 70.1 |
| MS.gene056188.t1 | AT5G11320 | 23.301 | 206 | 130 | 4 | 6 | 211 | 19 | 196 | 9.29e-13 | 69.7 |
| MS.gene056188.t1 | AT5G11320 | 23.301 | 206 | 130 | 4 | 6 | 211 | 19 | 196 | 2.81e-12 | 68.6 |
| MS.gene056188.t1 | AT5G25620 | 23.474 | 213 | 137 | 4 | 6 | 216 | 34 | 222 | 2.26e-11 | 65.9 |
| MS.gene056188.t1 | AT5G25620 | 23.474 | 213 | 137 | 4 | 6 | 216 | 34 | 222 | 2.51e-11 | 65.9 |
| MS.gene056188.t1 | AT1G04610 | 22.535 | 213 | 130 | 4 | 6 | 210 | 39 | 224 | 4.94e-11 | 64.7 |
Find 111 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTGATCCAAGAACGTTTC+CGG | 0.253124 | 8.1:+65664549 | MS.gene056188:CDS |
| CCAAGACATGCTTTGGTTCC+TGG | 0.277481 | 8.1:+65664766 | MS.gene056188:CDS |
| GCTCCATGGCTCTCTTTCAT+TGG | 0.284807 | 8.1:+65666077 | MS.gene056188:CDS |
| TCATGACCCGGAAACGTTCT+TGG | 0.312023 | 8.1:-65664556 | None:intergenic |
| ATGAATGGGATGATAACTAT+TGG | 0.345252 | 8.1:+65666983 | MS.gene056188:CDS |
| GAAGCGGTTGTTGTGTGTTC+TGG | 0.352052 | 8.1:+65664730 | MS.gene056188:CDS |
| CATGATTTGCCTTGGAAGAT+TGG | 0.352895 | 8.1:-65664491 | None:intergenic |
| ACATTCGATACGTCCGTTTC+AGG | 0.367202 | 8.1:+65666347 | MS.gene056188:CDS |
| GTACCCTGTACAGTGAATTA+TGG | 0.368004 | 8.1:-65665834 | None:intergenic |
| TAAAGACATATATCGCATTA+TGG | 0.370628 | 8.1:+65666296 | MS.gene056188:CDS |
| CACCACCTCTGTTTCAAATC+GGG | 0.375170 | 8.1:-65664635 | None:intergenic |
| TCACCACCTCTGTTTCAAAT+CGG | 0.375247 | 8.1:-65664636 | None:intergenic |
| AACTTCATACCCTTCAATAG+TGG | 0.379745 | 8.1:-65665601 | None:intergenic |
| TCCTCATTCTTTCAAAGATC+AGG | 0.381424 | 8.1:+65664837 | MS.gene056188:CDS |
| ATTCCTTTCCTCGAAACTAA+TGG | 0.383726 | 8.1:+65665990 | MS.gene056188:CDS |
| TGTAGAACCAAGACATGCTT+TGG | 0.386407 | 8.1:+65664759 | MS.gene056188:CDS |
| TCGTCCCTCCAATCTTCTAA+TGG | 0.387213 | 8.1:-65666907 | None:intergenic |
| GGTTGCCTCCATTAGAAGAT+TGG | 0.387547 | 8.1:+65666899 | MS.gene056188:CDS |
| ATACCCTTCAATAGTGGATT+CGG | 0.390856 | 8.1:-65665595 | None:intergenic |
| CTGTGAACTGTTTCTCGTGT+TGG | 0.401094 | 8.1:-65664445 | None:intergenic |
| TTGAGAGGAAAGGGAAGGAC+TGG | 0.404651 | 8.1:+65664662 | MS.gene056188:CDS |
| TGTGAACTGTTTCTCGTGTT+GGG | 0.413886 | 8.1:-65664444 | None:intergenic |
| TGGTGAAAGTTGAGAGGAAA+GGG | 0.417022 | 8.1:+65664653 | MS.gene056188:CDS |
| GGCGACGAGGCCGGAGACTC+CGG | 0.417512 | 8.1:-65664308 | None:intergenic |
| GCCTTCCTGTTGTAGCTCCT+TGG | 0.421074 | 8.1:-65664332 | None:intergenic |
| TTCCTCCTTCGCTGGCTCCA+TGG | 0.424941 | 8.1:+65666063 | MS.gene056188:CDS |
| TGTGATCCAAGAACGTTTCC+GGG | 0.427493 | 8.1:+65664550 | MS.gene056188:CDS |
| GACATCTCAAAAGATATTGC+AGG | 0.428767 | 8.1:+65665541 | MS.gene056188:CDS |
| TTGGAGGGACGATATGTTGA+TGG | 0.428898 | 8.1:+65666918 | MS.gene056188:CDS |
| CAATCTTCCAAGGCAAATCA+TGG | 0.437042 | 8.1:+65664492 | MS.gene056188:CDS |
| CAATGGCTAGTGGCACAGAT+TGG | 0.438330 | 8.1:+65666877 | MS.gene056188:CDS |
| TTACTATTCCATTAGTTTCG+AGG | 0.445234 | 8.1:-65665998 | None:intergenic |
| GGACTGGGTGGTTGAGTCTA+GGG | 0.447799 | 8.1:+65664678 | MS.gene056188:CDS |
| GTGATCGGCGCCGGAGTCTC+CGG | 0.449086 | 8.1:+65664298 | MS.gene056188:CDS |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8.1:+65665791 | MS.gene056188:CDS |
| AGGACTGGGTGGTTGAGTCT+AGG | 0.462432 | 8.1:+65664677 | MS.gene056188:CDS |
| CGCCGCCAAGGAGCTACAAC+AGG | 0.467029 | 8.1:+65664327 | MS.gene056188:CDS |
| ATTAAATGTATATATGAAGA+TGG | 0.470339 | 8.1:+65665770 | MS.gene056188:CDS |
| AGGATTCTCGCTTGGACAAA+GGG | 0.470355 | 8.1:-65664528 | None:intergenic |
| ACAAATGCACACACCTGAAA+CGG | 0.470413 | 8.1:-65666360 | None:intergenic |
| CTCCTTGGCGGCGACGAGGC+CGG | 0.472521 | 8.1:-65664317 | None:intergenic |
| CCTGGTATTGAAAACTTTCG+TGG | 0.473125 | 8.1:+65664784 | MS.gene056188:CDS |
| AAGAATCCCATGATTTGCCT+TGG | 0.478861 | 8.1:-65664499 | None:intergenic |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.483813 | 8.1:+65664283 | MS.gene056188:CDS |
| GAAGATTGGTGCGCAGAGAC+TGG | 0.485046 | 8.1:-65664477 | None:intergenic |
| AGCAGATCCATTCTGAATGA+TGG | 0.487281 | 8.1:-65667010 | None:intergenic |
| CAGGATTCTCGCTTGGACAA+AGG | 0.488933 | 8.1:-65664529 | None:intergenic |
| AATGGCTAGTGGCACAGATT+GGG | 0.490181 | 8.1:+65666878 | MS.gene056188:CDS |
| TTTGAGATGTCAAACGAACT+AGG | 0.491140 | 8.1:-65665529 | None:intergenic |
| ACTATTGAAGGGTATGAAGT+TGG | 0.493692 | 8.1:+65665603 | MS.gene056188:CDS |
| CTCCGGCCTCGTCGCCGCCA+AGG | 0.493718 | 8.1:+65664315 | MS.gene056188:CDS |
| TGAGAGGAAAGGGAAGGACT+GGG | 0.494040 | 8.1:+65664663 | MS.gene056188:CDS |
| ATTCCATTAGTTTCGAGGAA+AGG | 0.505621 | 8.1:-65665993 | None:intergenic |
| TGAAATGTATAGAGATGAAT+GGG | 0.506026 | 8.1:+65666969 | MS.gene056188:CDS |
| TGAATGGGATGATAACTATT+GGG | 0.513303 | 8.1:+65666984 | MS.gene056188:CDS |
| TGGATCACAGGATTCTCGCT+TGG | 0.513990 | 8.1:-65664536 | None:intergenic |
| CTGGTATTGAAAACTTTCGT+GGG | 0.521262 | 8.1:+65664785 | MS.gene056188:CDS |
| CGGAAACGTTCTTGGATCAC+AGG | 0.523334 | 8.1:-65664548 | None:intergenic |
| AGCCATGGAGCCAGCGAAGG+AGG | 0.524115 | 8.1:-65666065 | None:intergenic |
| ATCGAATGTGTGTAATGCTT+GGG | 0.526536 | 8.1:-65666333 | None:intergenic |
| ACAACCGCGTCGGAGGAACC+TGG | 0.530565 | 8.1:+65664380 | MS.gene056188:CDS |
| GATGCCATAATTCACTGTAC+AGG | 0.531205 | 8.1:+65665830 | MS.gene056188:CDS |
| ATGAAATGTATAGAGATGAA+TGG | 0.538896 | 8.1:+65666968 | MS.gene056188:CDS |
| TTCCTGTTGTAGCTCCTTGG+CGG | 0.540823 | 8.1:-65664329 | None:intergenic |
| TGCATCATTTCTTCTTCAGT+AGG | 0.544617 | 8.1:-65666267 | None:intergenic |
| TGCCTCCATTAGAAGATTGG+AGG | 0.544767 | 8.1:+65666902 | MS.gene056188:CDS |
| CGATTGAAGATAATCGCGTT+GGG | 0.546471 | 8.1:+65666021 | MS.gene056188:CDS |
| TCTCGAAAACGACGACGTTG+TGG | 0.551159 | 8.1:-65664354 | None:intergenic |
| CCAGGAACCAAAGCATGTCT+TGG | 0.554091 | 8.1:-65664766 | None:intergenic |
| ACGATTGAAGATAATCGCGT+TGG | 0.558753 | 8.1:+65666020 | MS.gene056188:CDS |
| TGGGATGCCATCATTCAGAA+TGG | 0.558777 | 8.1:+65667003 | MS.gene056188:CDS |
| ACCTGATCTTTGAAAGAATG+AGG | 0.559248 | 8.1:-65664838 | None:intergenic |
| TATCGAATGTGTGTAATGCT+TGG | 0.559900 | 8.1:-65666334 | None:intergenic |
| TAAAACTCTTGCAACCCACT+TGG | 0.561189 | 8.1:-65666226 | None:intergenic |
| CGAAGCACTTCTTCATGACC+CGG | 0.562385 | 8.1:-65664568 | None:intergenic |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.1:+65664289 | MS.gene056188:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.568751 | 8.1:-65665801 | None:intergenic |
| GTGGTGAAAGTTGAGAGGAA+AGG | 0.568850 | 8.1:+65664652 | MS.gene056188:CDS |
| AAAACCGAATCCACTATTGA+AGG | 0.571520 | 8.1:+65665591 | MS.gene056188:CDS |
| GAGAGCCATGGAGCCAGCGA+AGG | 0.571530 | 8.1:-65666068 | None:intergenic |
| CAGAGGTGGTGAAAGTTGAG+AGG | 0.575528 | 8.1:+65664647 | MS.gene056188:CDS |
| AGATATTGCAGGAGTTGCAA+AGG | 0.586378 | 8.1:+65665552 | MS.gene056188:CDS |
| CTCTGCGCACCAATCTTCCA+AGG | 0.591936 | 8.1:+65664482 | MS.gene056188:CDS |
| AAACCGAATCCACTATTGAA+GGG | 0.595030 | 8.1:+65665592 | MS.gene056188:CDS |
| ATGTATATATGAAGATGGCT+TGG | 0.596098 | 8.1:+65665775 | MS.gene056188:CDS |
| CAATATATGTTTCCATACTG+TGG | 0.598006 | 8.1:+65665636 | MS.gene056188:CDS |
| GCCTCCATTAGAAGATTGGA+GGG | 0.599594 | 8.1:+65666903 | MS.gene056188:CDS |
| GCCAAGGAGCTACAACAGGA+AGG | 0.605200 | 8.1:+65664331 | MS.gene056188:CDS |
| CGTGTTGGGTCAATGCTAAG+AGG | 0.608347 | 8.1:-65664430 | None:intergenic |
| TGGGTCAATGCTAAGAGGAT+CGG | 0.609799 | 8.1:-65664425 | None:intergenic |
| GACTGGGTGGTTGAGTCTAG+GGG | 0.610465 | 8.1:+65664679 | MS.gene056188:CDS |
| AATCTTCCAAGGCAAATCAT+GGG | 0.615078 | 8.1:+65664493 | MS.gene056188:CDS |
| GTAGCTCCTTGGCGGCGACG+AGG | 0.618767 | 8.1:-65664321 | None:intergenic |
| GAAAGTTGAGAGGAAAGGGA+AGG | 0.618934 | 8.1:+65664657 | MS.gene056188:CDS |
| AATTGAGTTACAAGCCAAGT+GGG | 0.620693 | 8.1:+65666212 | MS.gene056188:CDS |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.623772 | 8.1:+65664714 | MS.gene056188:CDS |
| TCCCTCCAATCTTCTAATGG+AGG | 0.629387 | 8.1:-65666904 | None:intergenic |
| GAGAAGAACAACCGCGTCGG+AGG | 0.637401 | 8.1:+65664373 | MS.gene056188:CDS |
| TTCGAGAAGAACAACCGCGT+CGG | 0.637502 | 8.1:+65664370 | MS.gene056188:CDS |
| AAACCAATGAAAGAGAGCCA+TGG | 0.638563 | 8.1:-65666080 | None:intergenic |
| GAGGAAAGGGAAGGACTGGG+TGG | 0.638915 | 8.1:+65664666 | MS.gene056188:CDS |
| GACCCGATTTGAAACAGAGG+TGG | 0.641010 | 8.1:+65664633 | MS.gene056188:CDS |
| TGGGTGGTTGAGTCTAGGGG+AGG | 0.649211 | 8.1:+65664682 | MS.gene056188:CDS |
| ATGCCATAATTCACTGTACA+GGG | 0.655356 | 8.1:+65665831 | MS.gene056188:CDS |
| AGACATATATCGCATTATGG+AGG | 0.656754 | 8.1:+65666299 | MS.gene056188:CDS |
| TAATTGAGTTACAAGCCAAG+TGG | 0.658830 | 8.1:+65666211 | MS.gene056188:CDS |
| TGACTACAAACAATGGCTAG+TGG | 0.662928 | 8.1:+65666867 | MS.gene056188:CDS |
| GTCAGGCTGACTACAAACAA+TGG | 0.679900 | 8.1:+65666860 | MS.gene056188:intron |
| TAGTTTCGAGGAAAGGAATG+CGG | 0.680554 | 8.1:-65665986 | None:intergenic |
| ATATCCAGGTTCCTCCGACG+CGG | 0.696857 | 8.1:-65664384 | None:intergenic |
| GTTGACCCGATTTGAAACAG+AGG | 0.712999 | 8.1:+65664630 | MS.gene056188:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTTAAGTAATTAAAAAAT+TGG | + | chr8.1:65664955-65664974 | MS.gene056188:intron | 10.0% |
| !!! | AAATATTTAGATATAGATTT+TGG | + | chr8.1:65664932-65664951 | MS.gene056188:intron | 10.0% |
| !!! | AATCTAAAATAAAATTAAAC+AGG | - | chr8.1:65665753-65665772 | None:intergenic | 10.0% |
| !!! | ATCTAAAATAAAATTAAACA+GGG | - | chr8.1:65665752-65665771 | None:intergenic | 10.0% |
| !! | ATATAAACAAATATTGTAAC+AGG | + | chr8.1:65665955-65665974 | MS.gene056188:intron | 15.0% |
| !! | ATTAAATGTATATATGAAGA+TGG | + | chr8.1:65665770-65665789 | MS.gene056188:CDS | 15.0% |
| !! | TAAAAGAAAAAATATGTTGA+AGG | - | chr8.1:65665883-65665902 | None:intergenic | 15.0% |
| !! | TATAAGTAAATAGTTAAACT+CGG | - | chr8.1:65666830-65666849 | None:intergenic | 15.0% |
| !!! | ATTAATTTTCCAAACAAAAT+AGG | - | chr8.1:65665466-65665485 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTGGAAAATTAAT+TGG | + | chr8.1:65665466-65665485 | MS.gene056188:intron | 15.0% |
| !! | ATAAGTAAATAGTTAAACTC+GGG | - | chr8.1:65666829-65666848 | None:intergenic | 20.0% |
| !! | TTGAAATCATTGGAAATAAA+TGG | + | chr8.1:65664889-65664908 | MS.gene056188:intron | 20.0% |
| !!! | CTATGAAATTAATCATTTTG+AGG | + | chr8.1:65665931-65665950 | MS.gene056188:intron | 20.0% |
| !!! | GATTTCAAAGTTTTCAAATT+TGG | - | chr8.1:65664877-65664896 | None:intergenic | 20.0% |
| !!! | TCAATTAACAGATTTAAGAT+AGG | + | chr8.1:65666421-65666440 | MS.gene056188:intron | 20.0% |
| !!! | TTTGAAAACTTTGAAATCAT+TGG | + | chr8.1:65664879-65664898 | MS.gene056188:intron | 20.0% |
| ! | ACTTATAAAATTACTCTGTC+AGG | + | chr8.1:65666843-65666862 | MS.gene056188:intron | 25.0% |
| ! | AGACTAAAATGATTAACACA+TGG | - | chr8.1:65665098-65665117 | None:intergenic | 25.0% |
| ! | ATCAAATGAAATGTATAGTG+AGG | - | chr8.1:65666393-65666412 | None:intergenic | 25.0% |
| ! | ATGAAAACACGATTTAATTC+AGG | + | chr8.1:65665066-65665085 | MS.gene056188:intron | 25.0% |
| ! | ATGAAATGTATAGAGATGAA+TGG | + | chr8.1:65666968-65666987 | MS.gene056188:CDS | 25.0% |
| ! | CAAAGCAATATCTAAGTATA+TGG | - | chr8.1:65665699-65665718 | None:intergenic | 25.0% |
| ! | TAAAGACATATATCGCATTA+TGG | + | chr8.1:65666296-65666315 | MS.gene056188:CDS | 25.0% |
| ! | TAATTTCCTAGTAATTGCAT+TGG | - | chr8.1:65666540-65666559 | None:intergenic | 25.0% |
| ! | TGAAATGTATAGAGATGAAT+GGG | + | chr8.1:65666969-65666988 | MS.gene056188:CDS | 25.0% |
| ! | TGGACAATTATAAGATTGTA+CGG | + | chr8.1:65664975-65664994 | MS.gene056188:intron | 25.0% |
| ! | TTACAATAAAAATCGTTTCC+TGG | - | chr8.1:65666194-65666213 | None:intergenic | 25.0% |
| ! | TTCATAGGCAAATTAGTATT+TGG | + | chr8.1:65666579-65666598 | MS.gene056188:intron | 25.0% |
| !! | AAGCATTGTTCAATTGTTAA+AGG | + | chr8.1:65666492-65666511 | MS.gene056188:intron | 25.0% |
| !! | AGGAGAAAGTTCATTATTTT+TGG | + | chr8.1:65665222-65665241 | MS.gene056188:intron | 25.0% |
| !! | ATTTTTAACATACCACAGTA+TGG | - | chr8.1:65665651-65665670 | None:intergenic | 25.0% |
| !! | TGTTTAATGCCTATTTTGTT+TGG | + | chr8.1:65665454-65665473 | MS.gene056188:intron | 25.0% |
| !!! | GTGTTGTTTTTACAAAATCA+CGG | + | chr8.1:65665013-65665032 | MS.gene056188:intron | 25.0% |
| !!! | GTTACTAGAGAATGTTTTAA+AGG | + | chr8.1:65666677-65666696 | MS.gene056188:intron | 25.0% |
| !!! | TACAGGTTGTGATTTTAATT+GGG | + | chr8.1:65665500-65665519 | MS.gene056188:intron | 25.0% |
| AAATGGATATCAATGCAAGT+AGG | + | chr8.1:65664906-65664925 | MS.gene056188:intron | 30.0% | |
| AACTCGGGCAAATTTATAAT+CGG | - | chr8.1:65666814-65666833 | None:intergenic | 30.0% | |
| AATCTCTAGATTGTACGAAT+TGG | - | chr8.1:65666731-65666750 | None:intergenic | 30.0% | |
| AATGAACTTTCTCCTATGAA+TGG | - | chr8.1:65665217-65665236 | None:intergenic | 30.0% | |
| ATCGTTAAAGTTATAAGCAC+CGG | - | chr8.1:65666761-65666780 | None:intergenic | 30.0% | |
| ATGAATGGGATGATAACTAT+TGG | + | chr8.1:65666983-65667002 | MS.gene056188:CDS | 30.0% | |
| ATGTATATATGAAGATGGCT+TGG | + | chr8.1:65665775-65665794 | MS.gene056188:CDS | 30.0% | |
| CAATATATGTTTCCATACTG+TGG | + | chr8.1:65665636-65665655 | MS.gene056188:CDS | 30.0% | |
| CAATTAAAATCACAACCTGT+AGG | - | chr8.1:65665501-65665520 | None:intergenic | 30.0% | |
| GGAAAAACATGTTTGTATAG+TGG | - | chr8.1:65666047-65666066 | None:intergenic | 30.0% | |
| TATGAATGGTTTAGTAGAGT+CGG | - | chr8.1:65665203-65665222 | None:intergenic | 30.0% | |
| TGAATGGGATGATAACTATT+GGG | + | chr8.1:65666984-65667003 | MS.gene056188:CDS | 30.0% | |
| TTTAGTAGAGTCGGTAAAAT+TGG | - | chr8.1:65665194-65665213 | None:intergenic | 30.0% | |
| ! | AATTGGTAATTACTACCTAC+AGG | + | chr8.1:65665483-65665502 | MS.gene056188:intron | 30.0% |
| ! | AGACTTTTGATGTGTTATCA+GGG | - | chr8.1:65665265-65665284 | None:intergenic | 30.0% |
| ! | TAGACTTTTGATGTGTTATC+AGG | - | chr8.1:65665266-65665285 | None:intergenic | 30.0% |
| ! | TTACTATTCCATTAGTTTCG+AGG | - | chr8.1:65666001-65666020 | None:intergenic | 30.0% |
| !! | CTACAGGTTGTGATTTTAAT+TGG | + | chr8.1:65665499-65665518 | MS.gene056188:intron | 30.0% |
| !! | GTGTTAATCATTTTAGTCTC+TGG | + | chr8.1:65665099-65665118 | MS.gene056188:intron | 30.0% |
| !!! | AATCTAGAGATTGTTTTGAC+CGG | + | chr8.1:65666739-65666758 | MS.gene056188:intron | 30.0% |
| AAAACCGAATCCACTATTGA+AGG | + | chr8.1:65665591-65665610 | MS.gene056188:CDS | 35.0% | |
| AAACCGAATCCACTATTGAA+GGG | + | chr8.1:65665592-65665611 | MS.gene056188:CDS | 35.0% | |
| AACTTCATACCCTTCAATAG+TGG | - | chr8.1:65665604-65665623 | None:intergenic | 35.0% | |
| AATCTTCCAAGGCAAATCAT+GGG | + | chr8.1:65664493-65664512 | MS.gene056188:CDS | 35.0% | |
| AATGTTGATGTGTGTTCTCA+TGG | + | chr8.1:65665167-65665186 | MS.gene056188:intron | 35.0% | |
| AATTGAGTTACAAGCCAAGT+GGG | + | chr8.1:65666212-65666231 | MS.gene056188:CDS | 35.0% | |
| AGACATATATCGCATTATGG+AGG | + | chr8.1:65666299-65666318 | MS.gene056188:CDS | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | - | chr8.1:65665804-65665823 | None:intergenic | 35.0% | |
| ATCGAATGTGTGTAATGCTT+GGG | - | chr8.1:65666336-65666355 | None:intergenic | 35.0% | |
| ATGCCATAATTCACTGTACA+GGG | + | chr8.1:65665831-65665850 | MS.gene056188:CDS | 35.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr8.1:65664283-65664302 | MS.gene056188:CDS | 35.0% | |
| ATTCCTTTCCTCGAAACTAA+TGG | + | chr8.1:65665990-65666009 | MS.gene056188:CDS | 35.0% | |
| CTCTAACCAATGCAATTACT+AGG | + | chr8.1:65666531-65666550 | MS.gene056188:intron | 35.0% | |
| GACATCTCAAAAGATATTGC+AGG | + | chr8.1:65665541-65665560 | MS.gene056188:CDS | 35.0% | |
| GACTCTACTAAACCATTCAT+AGG | + | chr8.1:65665202-65665221 | MS.gene056188:intron | 35.0% | |
| TAATTGAGTTACAAGCCAAG+TGG | + | chr8.1:65666211-65666230 | MS.gene056188:CDS | 35.0% | |
| TAATTGATTAAGACTTGCCG+TGG | + | chr8.1:65666168-65666187 | MS.gene056188:intron | 35.0% | |
| TATCGAATGTGTGTAATGCT+TGG | - | chr8.1:65666337-65666356 | None:intergenic | 35.0% | |
| TCCTCATTCTTTCAAAGATC+AGG | + | chr8.1:65664837-65664856 | MS.gene056188:CDS | 35.0% | |
| TGCATCATTTCTTCTTCAGT+AGG | - | chr8.1:65666270-65666289 | None:intergenic | 35.0% | |
| ! | ACCTGATCTTTGAAAGAATG+AGG | - | chr8.1:65664841-65664860 | None:intergenic | 35.0% |
| ! | ACTATTGAAGGGTATGAAGT+TGG | + | chr8.1:65665603-65665622 | MS.gene056188:CDS | 35.0% |
| ! | AGGATTTTGCAGGTGAATTT+GGG | + | chr8.1:65664599-65664618 | MS.gene056188:CDS | 35.0% |
| ! | ATTCCATTAGTTTCGAGGAA+AGG | - | chr8.1:65665996-65666015 | None:intergenic | 35.0% |
| ! | CTGGTATTGAAAACTTTCGT+GGG | + | chr8.1:65664785-65664804 | MS.gene056188:CDS | 35.0% |
| ! | TTACTAGGAAATTAGTCTCC+AGG | + | chr8.1:65666546-65666565 | MS.gene056188:intron | 35.0% |
| ! | TTTGAGATGTCAAACGAACT+AGG | - | chr8.1:65665532-65665551 | None:intergenic | 35.0% |
| !! | ATACCCTTCAATAGTGGATT+CGG | - | chr8.1:65665598-65665617 | None:intergenic | 35.0% |
| !!! | GTTGATGGAGTGTTTTAAGA+AGG | + | chr8.1:65666933-65666952 | MS.gene056188:CDS | 35.0% |
| !!! | GTTGTGATTTTAATTGGGCT+AGG | + | chr8.1:65665505-65665524 | MS.gene056188:CDS | 35.0% |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr8.1:65666083-65666102 | None:intergenic | 40.0% | |
| ACAAATGCACACACCTGAAA+CGG | - | chr8.1:65666363-65666382 | None:intergenic | 40.0% | |
| ACGATTGAAGATAATCGCGT+TGG | + | chr8.1:65666020-65666039 | MS.gene056188:CDS | 40.0% | |
| ACTTCCAGAGACCAAAATGA+TGG | + | chr8.1:65665391-65665410 | MS.gene056188:intron | 40.0% | |
| AGATATTGCAGGAGTTGCAA+AGG | + | chr8.1:65665552-65665571 | MS.gene056188:CDS | 40.0% | |
| AGCAGATCCATTCTGAATGA+TGG | - | chr8.1:65667013-65667032 | None:intergenic | 40.0% | |
| CAATCTTCCAAGGCAAATCA+TGG | + | chr8.1:65664492-65664511 | MS.gene056188:CDS | 40.0% | |
| CCAGGTGACATACATTTCAT+AGG | + | chr8.1:65666564-65666583 | MS.gene056188:intron | 40.0% | |
| CCTATGAAATGTATGTCACC+TGG | - | chr8.1:65666567-65666586 | None:intergenic | 40.0% | |
| CGATGTGACACGTTAATATG+CGG | - | chr8.1:65666639-65666658 | None:intergenic | 40.0% | |
| CGATTGAAGATAATCGCGTT+GGG | + | chr8.1:65666021-65666040 | MS.gene056188:CDS | 40.0% | |
| CGCATATTAACGTGTCACAT+CGG | + | chr8.1:65666637-65666656 | MS.gene056188:intron | 40.0% | |
| GACGATGTGTACTAATGAGA+AGG | - | chr8.1:65665294-65665313 | None:intergenic | 40.0% | |
| GATGCCATAATTCACTGTAC+AGG | + | chr8.1:65665830-65665849 | MS.gene056188:CDS | 40.0% | |
| GTACCCTGTACAGTGAATTA+TGG | - | chr8.1:65665837-65665856 | None:intergenic | 40.0% | |
| TAAAAATCGTTTCCTGGCCA+CGG | - | chr8.1:65666188-65666207 | None:intergenic | 40.0% | |
| TAAAACTCTTGCAACCCACT+TGG | - | chr8.1:65666229-65666248 | None:intergenic | 40.0% | |
| TAGTTTCGAGGAAAGGAATG+CGG | - | chr8.1:65665989-65666008 | None:intergenic | 40.0% | |
| TCACCACCTCTGTTTCAAAT+CGG | - | chr8.1:65664639-65664658 | None:intergenic | 40.0% | |
| TGACTACAAACAATGGCTAG+TGG | + | chr8.1:65666867-65666886 | MS.gene056188:CDS | 40.0% | |
| TGGTGAAAGTTGAGAGGAAA+GGG | + | chr8.1:65664653-65664672 | MS.gene056188:CDS | 40.0% | |
| TGTAGAACCAAGACATGCTT+TGG | + | chr8.1:65664759-65664778 | MS.gene056188:CDS | 40.0% | |
| ! | AAGAATCCCATGATTTGCCT+TGG | - | chr8.1:65664502-65664521 | None:intergenic | 40.0% |
| ! | AATTCACTGTACAGGGTACT+AGG | + | chr8.1:65665838-65665857 | MS.gene056188:intron | 40.0% |
| ! | CATGATTTGCCTTGGAAGAT+TGG | - | chr8.1:65664494-65664513 | None:intergenic | 40.0% |
| ! | CCACGAAAGTTTTCAATACC+AGG | - | chr8.1:65664787-65664806 | None:intergenic | 40.0% |
| ! | CCTGGTATTGAAAACTTTCG+TGG | + | chr8.1:65664784-65664803 | MS.gene056188:CDS | 40.0% |
| ! | GAGGATTTTGCAGGTGAATT+TGG | + | chr8.1:65664598-65664617 | MS.gene056188:CDS | 40.0% |
| ! | TCTAGCGCAAACCATCATTT+TGG | - | chr8.1:65665405-65665424 | None:intergenic | 40.0% |
| ! | TGTGAACTGTTTCTCGTGTT+GGG | - | chr8.1:65664447-65664466 | None:intergenic | 40.0% |
| !! | CAAACCATCATTTTGGTCTC+TGG | - | chr8.1:65665398-65665417 | None:intergenic | 40.0% |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr8.1:65664714-65664733 | MS.gene056188:CDS | 40.0% |
| !! | TGGGTTGCAAGAGTTTTATC+TGG | + | chr8.1:65666231-65666250 | MS.gene056188:CDS | 40.0% |
| !!! | TGAAGAAGTGCTTCGTTTTC+TGG | + | chr8.1:65664576-65664595 | MS.gene056188:CDS | 40.0% |
| !!! | TGTTTTTGGGTCGTATATCC+AGG | - | chr8.1:65664401-65664420 | None:intergenic | 40.0% |
| AATGGCTAGTGGCACAGATT+GGG | + | chr8.1:65666878-65666897 | MS.gene056188:CDS | 45.0% | |
| ACATTCGATACGTCCGTTTC+AGG | + | chr8.1:65666347-65666366 | MS.gene056188:CDS | 45.0% | |
| AGGATTCTCGCTTGGACAAA+GGG | - | chr8.1:65664531-65664550 | None:intergenic | 45.0% | |
| CACCACCTCTGTTTCAAATC+GGG | - | chr8.1:65664638-65664657 | None:intergenic | 45.0% | |
| CTGTGATCCAAGAACGTTTC+CGG | + | chr8.1:65664549-65664568 | MS.gene056188:CDS | 45.0% | |
| GAAAGTTGAGAGGAAAGGGA+AGG | + | chr8.1:65664657-65664676 | MS.gene056188:CDS | 45.0% | |
| GCCTCCATTAGAAGATTGGA+GGG | + | chr8.1:65666903-65666922 | MS.gene056188:CDS | 45.0% | |
| GGTTGCCTCCATTAGAAGAT+TGG | + | chr8.1:65666899-65666918 | MS.gene056188:CDS | 45.0% | |
| GTCAGGCTGACTACAAACAA+TGG | + | chr8.1:65666860-65666879 | MS.gene056188:intron | 45.0% | |
| GTGGTGAAAGTTGAGAGGAA+AGG | + | chr8.1:65664652-65664671 | MS.gene056188:CDS | 45.0% | |
| TCCCTCCAATCTTCTAATGG+AGG | - | chr8.1:65666907-65666926 | None:intergenic | 45.0% | |
| TCGTCCCTCCAATCTTCTAA+TGG | - | chr8.1:65666910-65666929 | None:intergenic | 45.0% | |
| TGCCTCCATTAGAAGATTGG+AGG | + | chr8.1:65666902-65666921 | MS.gene056188:CDS | 45.0% | |
| TGGGATGCCATCATTCAGAA+TGG | + | chr8.1:65667003-65667022 | MS.gene056188:CDS | 45.0% | |
| TGGGTCAATGCTAAGAGGAT+CGG | - | chr8.1:65664428-65664447 | None:intergenic | 45.0% | |
| TGTGATCCAAGAACGTTTCC+GGG | + | chr8.1:65664550-65664569 | MS.gene056188:CDS | 45.0% | |
| TTGGAGGGACGATATGTTGA+TGG | + | chr8.1:65666918-65666937 | MS.gene056188:CDS | 45.0% | |
| ! | ACATGTTTTTCCTCCTTCGC+TGG | + | chr8.1:65666055-65666074 | MS.gene056188:CDS | 45.0% |
| ! | AGAGGATCGGAGTCTGTTTT+TGG | - | chr8.1:65664415-65664434 | None:intergenic | 45.0% |
| ! | CTGTGAACTGTTTCTCGTGT+TGG | - | chr8.1:65664448-65664467 | None:intergenic | 45.0% |
| ! | GTTGACCCGATTTGAAACAG+AGG | + | chr8.1:65664630-65664649 | MS.gene056188:CDS | 45.0% |
| !! | CGTTTTCTGGAGGATTTTGC+AGG | + | chr8.1:65664589-65664608 | MS.gene056188:CDS | 45.0% |
| !! | GAGGATCGGAGTCTGTTTTT+GGG | - | chr8.1:65664414-65664433 | None:intergenic | 45.0% |
| !!! | AGAAGTGCTTCGTTTTCTGG+AGG | + | chr8.1:65664579-65664598 | MS.gene056188:CDS | 45.0% |
| CAATGGCTAGTGGCACAGAT+TGG | + | chr8.1:65666877-65666896 | MS.gene056188:CDS | 50.0% | |
| CAGAGGTGGTGAAAGTTGAG+AGG | + | chr8.1:65664647-65664666 | MS.gene056188:CDS | 50.0% | |
| CAGGATTCTCGCTTGGACAA+AGG | - | chr8.1:65664532-65664551 | None:intergenic | 50.0% | |
| CCAGGAACCAAAGCATGTCT+TGG | - | chr8.1:65664769-65664788 | None:intergenic | 50.0% | |
| CGGAAACGTTCTTGGATCAC+AGG | - | chr8.1:65664551-65664570 | None:intergenic | 50.0% | |
| CGTGTTGGGTCAATGCTAAG+AGG | - | chr8.1:65664433-65664452 | None:intergenic | 50.0% | |
| GAAGCGGTTGTTGTGTGTTC+TGG | + | chr8.1:65664730-65664749 | MS.gene056188:CDS | 50.0% | |
| GCTCCATGGCTCTCTTTCAT+TGG | + | chr8.1:65666077-65666096 | MS.gene056188:CDS | 50.0% | |
| GTCTCTGGCGTTAACGAATG+AGG | + | chr8.1:65665114-65665133 | MS.gene056188:intron | 50.0% | |
| TCATGACCCGGAAACGTTCT+TGG | - | chr8.1:65664559-65664578 | None:intergenic | 50.0% | |
| TCTCGAAAACGACGACGTTG+TGG | - | chr8.1:65664357-65664376 | None:intergenic | 50.0% | |
| TGAGAGGAAAGGGAAGGACT+GGG | + | chr8.1:65664663-65664682 | MS.gene056188:CDS | 50.0% | |
| TGGATCACAGGATTCTCGCT+TGG | - | chr8.1:65664539-65664558 | None:intergenic | 50.0% | |
| TTCCTGTTGTAGCTCCTTGG+CGG | - | chr8.1:65664332-65664351 | None:intergenic | 50.0% | |
| TTCGAGAAGAACAACCGCGT+CGG | + | chr8.1:65664370-65664389 | MS.gene056188:CDS | 50.0% | |
| TTGAGAGGAAAGGGAAGGAC+TGG | + | chr8.1:65664662-65664681 | MS.gene056188:CDS | 50.0% | |
| ! | CCAAGACATGCTTTGGTTCC+TGG | + | chr8.1:65664766-65664785 | MS.gene056188:CDS | 50.0% |
| ! | CGAAGCACTTCTTCATGACC+CGG | - | chr8.1:65664571-65664590 | None:intergenic | 50.0% |
| ! | GACCCGATTTGAAACAGAGG+TGG | + | chr8.1:65664633-65664652 | MS.gene056188:CDS | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | + | chr8.1:65665791-65665810 | MS.gene056188:CDS | 50.0% |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr8.1:65664289-65664308 | MS.gene056188:CDS | 55.0% | |
| AGGACTGGGTGGTTGAGTCT+AGG | + | chr8.1:65664677-65664696 | MS.gene056188:CDS | 55.0% | |
| ATATCCAGGTTCCTCCGACG+CGG | - | chr8.1:65664387-65664406 | None:intergenic | 55.0% | |
| CTCTGCGCACCAATCTTCCA+AGG | + | chr8.1:65664482-65664501 | MS.gene056188:CDS | 55.0% | |
| GAAGATTGGTGCGCAGAGAC+TGG | - | chr8.1:65664480-65664499 | None:intergenic | 55.0% | |
| GACTGGGTGGTTGAGTCTAG+GGG | + | chr8.1:65664679-65664698 | MS.gene056188:CDS | 55.0% | |
| GATTAAGACTTGCCGTGGCC+AGG | + | chr8.1:65666173-65666192 | MS.gene056188:intron | 55.0% | |
| GCCAAGGAGCTACAACAGGA+AGG | + | chr8.1:65664331-65664350 | MS.gene056188:CDS | 55.0% | |
| GCCTTCCTGTTGTAGCTCCT+TGG | - | chr8.1:65664335-65664354 | None:intergenic | 55.0% | |
| GGACTGGGTGGTTGAGTCTA+GGG | + | chr8.1:65664678-65664697 | MS.gene056188:CDS | 55.0% | |
| GAGAAGAACAACCGCGTCGG+AGG | + | chr8.1:65664373-65664392 | MS.gene056188:CDS | 60.0% | |
| GAGGAAAGGGAAGGACTGGG+TGG | + | chr8.1:65664666-65664685 | MS.gene056188:CDS | 60.0% | |
| TGGGTGGTTGAGTCTAGGGG+AGG | + | chr8.1:65664682-65664701 | MS.gene056188:CDS | 60.0% | |
| !! | TTCCTCCTTCGCTGGCTCCA+TGG | + | chr8.1:65666063-65666082 | MS.gene056188:CDS | 60.0% |
| ACAACCGCGTCGGAGGAACC+TGG | + | chr8.1:65664380-65664399 | MS.gene056188:CDS | 65.0% | |
| AGCCATGGAGCCAGCGAAGG+AGG | - | chr8.1:65666068-65666087 | None:intergenic | 65.0% | |
| CGCCGCCAAGGAGCTACAAC+AGG | + | chr8.1:65664327-65664346 | MS.gene056188:CDS | 65.0% | |
| GAGAGCCATGGAGCCAGCGA+AGG | - | chr8.1:65666071-65666090 | None:intergenic | 65.0% | |
| GTAGCTCCTTGGCGGCGACG+AGG | - | chr8.1:65664324-65664343 | None:intergenic | 70.0% | |
| ! | GTGATCGGCGCCGGAGTCTC+CGG | + | chr8.1:65664298-65664317 | MS.gene056188:CDS | 70.0% |
| CTCCTTGGCGGCGACGAGGC+CGG | - | chr8.1:65664320-65664339 | None:intergenic | 75.0% | |
| GGCGACGAGGCCGGAGACTC+CGG | - | chr8.1:65664311-65664330 | None:intergenic | 75.0% | |
| ! | CTCCGGCCTCGTCGCCGCCA+AGG | + | chr8.1:65664315-65664334 | MS.gene056188:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 65664283 | 65667038 | 65664283 | ID=MS.gene056188 |
| chr8.1 | mRNA | 65664283 | 65667038 | 65664283 | ID=MS.gene056188.t1;Parent=MS.gene056188 |
| chr8.1 | exon | 65664283 | 65664858 | 65664283 | ID=MS.gene056188.t1.exon1;Parent=MS.gene056188.t1 |
| chr8.1 | CDS | 65664283 | 65664858 | 65664283 | ID=cds.MS.gene056188.t1;Parent=MS.gene056188.t1 |
| chr8.1 | exon | 65665505 | 65665657 | 65665505 | ID=MS.gene056188.t1.exon2;Parent=MS.gene056188.t1 |
| chr8.1 | CDS | 65665505 | 65665657 | 65665505 | ID=cds.MS.gene056188.t1;Parent=MS.gene056188.t1 |
| chr8.1 | exon | 65665770 | 65665852 | 65665770 | ID=MS.gene056188.t1.exon3;Parent=MS.gene056188.t1 |
| chr8.1 | CDS | 65665770 | 65665852 | 65665770 | ID=cds.MS.gene056188.t1;Parent=MS.gene056188.t1 |
| chr8.1 | exon | 65665977 | 65666112 | 65665977 | ID=MS.gene056188.t1.exon4;Parent=MS.gene056188.t1 |
| chr8.1 | CDS | 65665977 | 65666112 | 65665977 | ID=cds.MS.gene056188.t1;Parent=MS.gene056188.t1 |
| chr8.1 | exon | 65666195 | 65666368 | 65666195 | ID=MS.gene056188.t1.exon5;Parent=MS.gene056188.t1 |
| chr8.1 | CDS | 65666195 | 65666368 | 65666195 | ID=cds.MS.gene056188.t1;Parent=MS.gene056188.t1 |
| chr8.1 | exon | 65666865 | 65667038 | 65666865 | ID=MS.gene056188.t1.exon6;Parent=MS.gene056188.t1 |
| chr8.1 | CDS | 65666865 | 65667038 | 65666865 | ID=cds.MS.gene056188.t1;Parent=MS.gene056188.t1 |
| Gene Sequence |
| Protein sequence |
