AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92392


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92392.t1 MTR_8g037880 95.602 432 19 0 1 432 1 432 0.0 859
MS.gene92392.t1 MTR_8g037910 87.269 432 54 1 1 432 1 431 0.0 788
MS.gene92392.t1 MTR_8g037910 90.852 317 28 1 1 317 1 316 0.0 592
MS.gene92392.t1 MTR_8g037910 90.842 273 24 1 1 273 1 272 0.0 507
MS.gene92392.t1 MTR_5g012130 54.060 431 188 4 4 427 13 440 3.92e-160 459
MS.gene92392.t1 MTR_5g012130 55.975 318 137 2 4 318 33 350 1.07e-118 350
MS.gene92392.t1 MTR_3g437580 42.438 443 232 8 4 432 13 446 5.71e-118 352
MS.gene92392.t1 MTR_3g437580 43.027 337 176 6 4 325 13 348 3.32e-88 272
MS.gene92392.t1 MTR_5g012130 52.016 248 116 2 4 248 33 280 2.81e-77 242
MS.gene92392.t1 MTR_7g107710 23.488 281 175 6 4 279 6 251 2.15e-17 84.0
MS.gene92392.t1 MTR_1g011630 25.114 219 135 6 6 223 18 208 2.31e-17 84.0
MS.gene92392.t1 MTR_3g109520 27.619 210 123 6 6 212 41 224 5.55e-17 82.8
MS.gene92392.t1 MTR_2g450510 26.877 253 128 8 3 222 4 232 5.77e-16 80.1
MS.gene92392.t1 MTR_2g450310 26.877 253 128 8 3 222 4 232 3.19e-15 77.8
MS.gene92392.t1 MTR_2g043850 26.923 208 101 7 3 184 13 195 2.32e-14 75.5
MS.gene92392.t1 MTR_7g107690 23.013 239 151 6 3 236 7 217 3.90e-14 73.9
MS.gene92392.t1 MTR_2g044140 27.404 208 100 7 3 184 13 195 1.05e-13 73.2
MS.gene92392.t1 MTR_1g008380 24.880 209 129 6 6 212 44 226 2.08e-12 68.9
MS.gene92392.t1 MTR_5g033260 24.762 210 131 5 4 211 6 190 3.81e-12 67.8
MS.gene92392.t1 MTR_2g020630 24.280 243 127 8 3 213 13 230 8.60e-12 67.4
MS.gene92392.t1 MTR_8g432640 21.622 222 147 5 4 223 6 202 4.25e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92392.t1 AT1G62620 54.439 428 182 5 4 421 13 437 3.24e-164 470
MS.gene92392.t1 AT1G63370 53.972 428 184 5 4 421 13 437 1.49e-162 466
MS.gene92392.t1 AT1G12140 53.647 425 191 3 2 421 11 434 1.63e-156 451
MS.gene92392.t1 AT1G12140 53.647 425 191 3 2 421 11 434 1.63e-156 451
MS.gene92392.t1 AT1G12200 53.037 428 190 4 4 421 14 440 4.66e-156 449
MS.gene92392.t1 AT1G62600 52.459 427 194 3 4 421 13 439 1.67e-153 442
MS.gene92392.t1 AT1G12140 53.176 425 191 4 2 421 11 432 7.56e-153 441
MS.gene92392.t1 AT1G62620 56.800 375 155 3 4 371 13 387 5.41e-151 434
MS.gene92392.t1 AT1G65860 50.474 422 203 4 4 420 13 433 1.36e-149 433
MS.gene92392.t1 AT1G12160 49.658 439 196 6 4 420 12 447 1.82e-149 433
MS.gene92392.t1 AT1G62560 49.052 422 210 3 4 420 13 434 1.51e-147 428
MS.gene92392.t1 AT1G12130 51.778 450 186 8 4 429 13 455 1.66e-146 426
MS.gene92392.t1 AT1G62580 52.471 425 194 5 4 421 14 437 3.66e-146 424
MS.gene92392.t1 AT1G62540 51.896 422 197 4 4 420 13 433 2.92e-145 422
MS.gene92392.t1 AT1G62570 51.064 423 199 5 4 420 13 433 7.33e-144 418
MS.gene92392.t1 AT1G62600 54.907 377 161 3 4 371 13 389 1.05e-141 410
MS.gene92392.t1 AT1G62540 49.217 447 196 5 4 420 13 458 3.12e-141 412
MS.gene92392.t1 AT1G62560 51.459 377 178 3 4 375 13 389 2.40e-138 402
MS.gene92392.t1 AT1G62580 48.690 458 194 7 4 421 14 470 1.45e-137 404
MS.gene92392.t1 AT1G62540 49.289 422 190 5 4 420 13 415 3.79e-132 388
MS.gene92392.t1 AT1G63340 47.518 423 178 4 4 421 14 397 5.13e-131 384
MS.gene92392.t1 AT5G61290 45.708 431 215 5 4 420 16 441 2.51e-127 376
MS.gene92392.t1 AT1G63370 57.009 321 131 3 4 317 13 333 2.61e-126 369
MS.gene92392.t1 AT1G12200 56.522 322 132 2 4 317 14 335 1.60e-121 358
MS.gene92392.t1 AT5G07800 42.824 432 230 7 3 420 15 443 6.19e-117 350
MS.gene92392.t1 AT1G62580 54.985 331 132 4 4 317 14 344 4.93e-111 331
MS.gene92392.t1 AT1G63390 59.441 143 51 2 4 139 13 155 2.52e-43 150
MS.gene92392.t1 AT1G19250 29.461 241 115 8 3 212 12 228 3.31e-17 84.3
MS.gene92392.t1 AT5G45180 24.318 440 206 19 3 348 12 418 3.98e-17 83.6
MS.gene92392.t1 AT5G11320 23.394 218 138 5 6 223 19 207 7.37e-15 75.9
MS.gene92392.t1 AT5G11320 23.394 218 138 5 6 223 19 207 1.82e-14 75.1
MS.gene92392.t1 AT4G32540 25.203 246 152 8 6 248 23 239 1.14e-13 72.8
MS.gene92392.t1 AT4G32540 25.203 246 152 8 6 248 23 239 1.14e-13 72.8
MS.gene92392.t1 AT4G13260 23.923 209 132 6 6 212 30 213 3.15e-13 70.5
MS.gene92392.t1 AT4G13260 23.923 209 132 6 6 212 30 213 7.86e-13 70.1
MS.gene92392.t1 AT5G25620 22.727 220 143 5 6 223 34 228 5.64e-12 67.8
MS.gene92392.t1 AT5G25620 22.273 220 144 4 6 223 34 228 6.23e-12 67.4

Find 120 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGTTTGTATTAACCTTAT+AGG 0.183252 8.4:+60375619 None:intergenic
TATCAATCCATGGAGGAAAA+TGG 0.199770 8.4:-60375397 MS.gene92392:CDS
TTACTGTTCCATTTGTTTCT+AGG 0.201456 8.4:+60375726 None:intergenic
GAGGATCAGAGTCTGATTTA+TGG 0.233873 8.4:+60378665 None:intergenic
TTTCATTGGTTTAACCTATA+AGG 0.238314 8.4:-60375633 MS.gene92392:intron
CCGAGACTTGCTTTGGTTCC+TGG 0.252034 8.4:-60378307 MS.gene92392:CDS
ATGAATGGGATGATAATTAT+TGG 0.261638 8.4:-60374899 MS.gene92392:CDS
CGGTGATCCAAGAACGTTTC+CGG 0.270104 8.4:-60378527 MS.gene92392:CDS
TCATGACCCGGAAACGTTCT+TGG 0.312023 8.4:+60378520 None:intergenic
CTACCCTTCAAATCTGGTTT+CGG 0.333497 8.4:+60376100 None:intergenic
AACTTCCTACCCTTCAAATC+TGG 0.337087 8.4:+60376094 None:intergenic
CTGGTTGGGTCTATGCTTAG+AGG 0.342999 8.4:+60378646 None:intergenic
AGGATCAGAGTCTGATTTAT+GGG 0.356943 8.4:+60378666 None:intergenic
GGCTGCCTCCATTGGAAGAT+TGG 0.357111 8.4:-60374983 MS.gene92392:CDS
CACCACCTCCGTTTCAAATC+GGG 0.359835 8.4:+60378441 None:intergenic
CAATATATGTTTCCATACTT+TGG 0.367814 8.4:-60376059 MS.gene92392:intron
TTACCCTGTACAGTGAATTA+TGG 0.368004 8.4:+60375892 None:intergenic
CTGTGAACTGTTTCTCTGGT+TGG 0.381244 8.4:+60378631 None:intergenic
TCACCACCTCCGTTTCAAAT+CGG 0.383633 8.4:+60378440 None:intergenic
GCACCATGGCTCTCTTTCAT+TGG 0.386501 8.4:-60375647 MS.gene92392:CDS
GAAGCGGTTATTGTGTGTTC+AGG 0.389205 8.4:-60378343 MS.gene92392:CDS
TTCATCATCTCTTCTTCATC+GGG 0.398953 8.4:+60375436 None:intergenic
TGTGAACTGTTTCTCTGGTT+GGG 0.399952 8.4:+60378632 None:intergenic
TGTGGAACCGAGACTTGCTT+TGG 0.402751 8.4:-60378314 MS.gene92392:CDS
CAATCTTCCAAGACATATCA+TGG 0.411970 8.4:-60378584 MS.gene92392:CDS
ATCAATCCATGGAGGAAAAT+GGG 0.434145 8.4:-60375396 MS.gene92392:CDS
GCCTTCTTGCTGTAGCTCCT+TGG 0.434476 8.4:+60378744 None:intergenic
AGCGAATGAGTTTGACGCTT+GGG 0.436767 8.4:+60375370 None:intergenic
GGTGATCCAAGAACGTTTCC+GGG 0.437865 8.4:-60378526 MS.gene92392:CDS
ACTGCTGTGAACTGTTTCTC+TGG 0.438925 8.4:+60378627 None:intergenic
ACAGATTGGGCTGCCTCCAT+TGG 0.441401 8.4:-60374991 MS.gene92392:CDS
ATTAAATGTGTATATGAAGA+TGG 0.442499 8.4:-60375956 MS.gene92392:CDS
AGAGGAAAGGAGGGAAGGAG+TGG 0.442535 8.4:-60378411 MS.gene92392:CDS
TGGATCACCGGATTCTCGCT+TGG 0.443511 8.4:+60378540 None:intergenic
CGGATTCTCGCTTGGACAAA+GGG 0.444441 8.4:+60378548 None:intergenic
ATTCCTTTCCTAGAAACAAA+TGG 0.445885 8.4:-60375734 MS.gene92392:CDS
CCTTTGTCCAAGCGAGAATC+CGG 0.450017 8.4:-60378547 MS.gene92392:CDS
CCTGGTATTGAAAACTTTCG+TGG 0.451982 8.4:-60378289 MS.gene92392:CDS
ACCTGGTCTTTGAAAGAATG+AGG 0.454799 8.4:+60378235 None:intergenic
GGCTTGGTTGCCTTTGAAGA+TGG 0.455524 8.4:-60375935 MS.gene92392:CDS
TTGGAGGGACAATATGTTGA+TGG 0.458426 8.4:-60374964 MS.gene92392:CDS
CATTGGCTAGTGGAACAGAT+TGG 0.461510 8.4:-60375005 MS.gene92392:CDS
CATGATATGTCTTGGAAGAT+TGG 0.466055 8.4:+60378585 None:intergenic
GGAGTGGGTGGTTGAGTCAA+GGG 0.467215 8.4:-60378395 MS.gene92392:CDS
GTTCCATTTGTTTCTAGGAA+AGG 0.468015 8.4:+60375731 None:intergenic
TCCTCATTCTTTCAAAGACC+AGG 0.469778 8.4:-60378236 MS.gene92392:intron
CTCCGGTATGGTTGCCGCCA+AGG 0.471770 8.4:-60378761 MS.gene92392:CDS
CCCAACACGATTATCTTCAA+TGG 0.472659 8.4:+60375703 None:intergenic
GTGATCGGCGCCGGAGTCTC+CGG 0.474098 8.4:-60378778 MS.gene92392:CDS
TTTCATCATCTCTTCTTCAT+CGG 0.474139 8.4:+60375435 None:intergenic
CCGGATTCTCGCTTGGACAA+AGG 0.477123 8.4:+60378547 None:intergenic
TGAATGGGATGATAATTATT+GGG 0.478067 8.4:-60374898 MS.gene92392:CDS
AGGAGTGGGTGGTTGAGTCA+AGG 0.479745 8.4:-60378396 MS.gene92392:CDS
AAGACCGAAACCAGATTTGA+AGG 0.481017 8.4:-60376104 MS.gene92392:CDS
TGATTTATGGGTGTATATCC+AGG 0.485907 8.4:+60378678 None:intergenic
TGAAATGTTTAGAGATGAAT+GGG 0.486215 8.4:-60374913 MS.gene92392:CDS
ATTGGCTAGTGGAACAGATT+GGG 0.486382 8.4:-60375004 MS.gene92392:CDS
GAGGAAAGGAGGGAAGGAGT+GGG 0.487432 8.4:-60378410 MS.gene92392:CDS
TGAAAGTTGAGAGGAAAGGA+GGG 0.491312 8.4:-60378420 MS.gene92392:CDS
AAGAACCCCATGATATGTCT+TGG 0.495350 8.4:+60378577 None:intergenic
GCTGGTGAGTTTGGGATACA+CGG 0.497630 8.4:-60378469 MS.gene92392:CDS
GAAAGGAGGGAAGGAGTGGG+TGG 0.498908 8.4:-60378407 MS.gene92392:CDS
CTCCTTGGCGGCAACCATAC+CGG 0.502506 8.4:+60378759 None:intergenic
TTCTTGCTGTAGCTCCTTGG+CGG 0.508210 8.4:+60378747 None:intergenic
ATGAAATGTTTAGAGATGAA+TGG 0.514327 8.4:-60374914 MS.gene92392:CDS
GTGAAAGTTGAGAGGAAAGG+AGG 0.518575 8.4:-60378421 MS.gene92392:CDS
CGGGTTGACCCGATTTGAAA+CGG 0.522315 8.4:-60378449 MS.gene92392:CDS
TACAAGCCAAGTGGATTGCT+AGG 0.525933 8.4:-60375483 MS.gene92392:CDS
AGTTGAGAGGAAAGGAGGGA+AGG 0.527409 8.4:-60378416 MS.gene92392:CDS
ATGGTTAAAGTTGCAGTGAT+CGG 0.527688 8.4:-60378793 MS.gene92392:CDS
TGCCTCCATTGGAAGATTGG+AGG 0.528808 8.4:-60374980 MS.gene92392:CDS
ACAACCGCGTCGGAGGAACC+TGG 0.530565 8.4:-60378696 MS.gene92392:CDS
TGGGTGGTTGAGTCAAGGGG+TGG 0.539244 8.4:-60378391 MS.gene92392:CDS
ACCATTGAAGATAATCGTGT+TGG 0.540422 8.4:-60375704 MS.gene92392:CDS
CGGAAACGTTCTTGGATCAC+CGG 0.540881 8.4:+60378528 None:intergenic
CCATTGAAGATAATCGTGTT+GGG 0.541675 8.4:-60375703 MS.gene92392:CDS
TAAAGATTTCTATCAATCCA+TGG 0.542834 8.4:-60375407 MS.gene92392:CDS
GAGAGCCATGGTGCTAGTGA+AGG 0.545801 8.4:+60375656 None:intergenic
GGCAACCATACCGGAGACTC+CGG 0.546270 8.4:+60378768 None:intergenic
CGAAGCACTTCTTCATGACC+CGG 0.562385 8.4:+60378508 None:intergenic
CGGCGCCGGAGTCTCCGGTA+TGG 0.563529 8.4:-60378773 MS.gene92392:CDS
ACAAGCCAAGTGGATTGCTA+GGG 0.564142 8.4:-60375482 MS.gene92392:CDS
AGATATTGCAAGACTAGCAA+AGG 0.564596 8.4:-60376143 MS.gene92392:CDS
AAAGTTGCAGTGATCGGCGC+CGG 0.565896 8.4:-60378787 MS.gene92392:CDS
GCCTCCATTGGAAGATTGGA+GGG 0.571840 8.4:-60374979 MS.gene92392:CDS
GAGAAGAACAACCGCGTCGG+AGG 0.573075 8.4:-60378703 MS.gene92392:CDS
GACCCGATTTGAAACGGAGG+TGG 0.573131 8.4:-60378443 MS.gene92392:CDS
TTCCTCCTTCACTAGCACCA+TGG 0.574851 8.4:-60375661 MS.gene92392:CDS
AGTAGAGAATCCATCTTCAA+AGG 0.575571 8.4:+60375925 None:intergenic
GCCAAGGAGCTACAGCAAGA+AGG 0.578883 8.4:-60378745 MS.gene92392:CDS
AGCCATGGTGCTAGTGAAGG+AGG 0.579202 8.4:+60375659 None:intergenic
ATAAGCATACACACTTGCAA+TGG 0.579533 8.4:+60375343 None:intergenic
AAGCGAATGAGTTTGACGCT+TGG 0.580224 8.4:+60375369 None:intergenic
GATGCCATAATTCACTGTAC+AGG 0.584145 8.4:-60375896 MS.gene92392:CDS
GTGGTGAAAGTTGAGAGGAA+AGG 0.596110 8.4:-60378424 MS.gene92392:CDS
CGGAGGTGGTGAAAGTTGAG+AGG 0.596521 8.4:-60378429 MS.gene92392:CDS
AATCTTCCAAGACATATCAT+GGG 0.597490 8.4:-60378583 MS.gene92392:CDS
GAGTGGGTGGTTGAGTCAAG+GGG 0.599919 8.4:-60378394 MS.gene92392:CDS
CCAGGAACCAAAGCAAGTCT+CGG 0.606520 8.4:+60378307 None:intergenic
ATGTGTATATGAAGATGGCT+TGG 0.608479 8.4:-60375951 MS.gene92392:CDS
ATGCCATAATTCACTGTACA+GGG 0.609312 8.4:-60375895 MS.gene92392:intron
CGAAACCAGATTTGAAGGGT+AGG 0.609593 8.4:-60376099 MS.gene92392:CDS
TTGTCCCTCCAATCTTCCAA+TGG 0.611794 8.4:+60374975 None:intergenic
CTGGTGAGTTTGGGATACAC+GGG 0.612264 8.4:-60378468 MS.gene92392:CDS
GTCAGGGTGACTACAAACAT+TGG 0.621125 8.4:-60375022 MS.gene92392:intron
GAGTCAAGAAGTGTTTGAAG+CGG 0.628510 8.4:-60378359 MS.gene92392:CDS
TGACTACAAACATTGGCTAG+TGG 0.629841 8.4:-60375015 MS.gene92392:CDS
TCCCTCCAATCTTCCAATGG+AGG 0.630473 8.4:+60374978 None:intergenic
AGACCGAAACCAGATTTGAA+GGG 0.637200 8.4:-60376103 MS.gene92392:CDS
TGATTGAGTTACAAGCCAAG+TGG 0.640201 8.4:-60375492 MS.gene92392:CDS
TTGTTTCTAGGAAAGGAATG+TGG 0.641337 8.4:+60375738 None:intergenic
TAAAACCCTAGCAATCCACT+TGG 0.647424 8.4:+60375477 None:intergenic
ATATCCAGGTTCCTCCGACG+CGG 0.654542 8.4:+60378692 None:intergenic
TTTGAGAAGAACAACCGCGT+CGG 0.657447 8.4:-60378706 MS.gene92392:CDS
AAACCAATGAAAGAGAGCCA+TGG 0.673851 8.4:+60375644 None:intergenic
AGATGGATTCTCTACTCATG+CGG 0.676981 8.4:-60375918 MS.gene92392:CDS
ATCTTCCAAGACATATCATG+GGG 0.677371 8.4:-60378582 MS.gene92392:CDS
TGGGATGCTATCATACAGAG+TGG 0.690605 8.4:-60374879 MS.gene92392:CDS
GTTGACCCGATTTGAAACGG+AGG 0.721505 8.4:-60378446 MS.gene92392:CDS
AGATTTCTATCAATCCATGG+AGG 0.738259 8.4:-60375404 MS.gene92392:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTCAAATATTACTT+TGG - chr8.4:60376577-60376596 MS.gene92392:intron 10.0%
!! AAATTAATAATAAATTATCG+TGG - chr8.4:60378124-60378143 MS.gene92392:intron 10.0%
!! AATAATTCAAATATTACTTT+GGG - chr8.4:60376578-60376597 MS.gene92392:intron 10.0%
!! ATATATATAATTAATGATTG+AGG - chr8.4:60377864-60377883 MS.gene92392:intron 10.0%
!! ATTAATAGTGTTTATATAAT+GGG + chr8.4:60376991-60377010 None:intergenic 10.0%
!!! AAAAATATTTTTTACTTTGA+AGG - chr8.4:60376279-60376298 MS.gene92392:intron 10.0%
!!! AAAATATTTTTTACTTTGAA+GGG - chr8.4:60376280-60376299 MS.gene92392:intron 10.0%
!!! ATATGCAATATAATATATTT+TGG + chr8.4:60376752-60376771 None:intergenic 10.0%
!!! TGAAAAAGAATTTTTATTTA+CGG - chr8.4:60376189-60376208 MS.gene92392:CDS 10.0%
!! AAAAATAAATTACTTTGTGT+TGG + chr8.4:60377128-60377147 None:intergenic 15.0%
!! AATTAATATATGAGAAACTT+TGG - chr8.4:60376550-60376569 MS.gene92392:intron 15.0%
!! AGAAAAATATGTGAAAATTA+AGG + chr8.4:60377816-60377835 None:intergenic 15.0%
!! ATAAATCATAATAATATGAC+AGG - chr8.4:60377890-60377909 MS.gene92392:intron 15.0%
!! ATTAATATATGAGAAACTTT+GGG - chr8.4:60376551-60376570 MS.gene92392:intron 15.0%
!! CATTAATAGTGTTTATATAA+TGG + chr8.4:60376992-60377011 None:intergenic 15.0%
!! GAGATAATATAATTAGTTAA+TGG - chr8.4:60375959-60375978 MS.gene92392:CDS 15.0%
!! TTAAGTAGAAATTATCAATT+AGG + chr8.4:60377446-60377465 None:intergenic 15.0%
!! TTGAAGGATTATTTATATAT+TGG + chr8.4:60375723-60375742 None:intergenic 15.0%
!!! AAAATATTTTAGGAAAACTT+AGG - chr8.4:60376817-60376836 MS.gene92392:intron 15.0%
!!! AAATATTTTAGGAAAACTTA+GGG - chr8.4:60376818-60376837 MS.gene92392:intron 15.0%
!!! ACATAATCTTTTTTTTTTTG+TGG + chr8.4:60375648-60375667 None:intergenic 15.0%
!!! ACATTTTTTACATTTTCTTT+GGG - chr8.4:60377176-60377195 MS.gene92392:intron 15.0%
!!! CAGAAAACTATTTTAAATTA+AGG + chr8.4:60376061-60376080 None:intergenic 15.0%
!!! TAAGTTTTCCTAAAATATTT+TGG + chr8.4:60376818-60376837 None:intergenic 15.0%
!!! TACATTTTTTACATTTTCTT+TGG - chr8.4:60377175-60377194 MS.gene92392:intron 15.0%
!! AACGTAATGAATAAAAAAGT+TGG + chr8.4:60375688-60375707 None:intergenic 20.0%
!! ACAAATTTGACAATTGTAAA+GGG - chr8.4:60378562-60378581 MS.gene92392:CDS 20.0%
!! ACAATTGTCAAATTTGTAAT+TGG + chr8.4:60378559-60378578 None:intergenic 20.0%
!! ATTAAATGTGTATATGAAGA+TGG - chr8.4:60377703-60377722 MS.gene92392:intron 20.0%
!! TACAAATTTGACAATTGTAA+AGG - chr8.4:60378561-60378580 MS.gene92392:CDS 20.0%
!! TATTATTCTTGTATGTGTTA+CGG + chr8.4:60376110-60376129 None:intergenic 20.0%
!! TTCAGATTACTTGATTAAAT+AGG - chr8.4:60375477-60375496 MS.gene92392:CDS 20.0%
!!! AAATTGCACATTTGAAATTA+AGG - chr8.4:60375780-60375799 MS.gene92392:intron 20.0%
!!! AAATTTTACATACCAAAGTA+TGG + chr8.4:60377615-60377634 None:intergenic 20.0%
!!! AACATTCATGACTAATTTTA+AGG + chr8.4:60375593-60375612 None:intergenic 20.0%
!!! AATTGCACATTTGAAATTAA+GGG - chr8.4:60375781-60375800 MS.gene92392:intron 20.0%
!!! AGATTTTTAGAAGTCTTTTT+CGG - chr8.4:60376480-60376499 MS.gene92392:intron 20.0%
!!! ATAGGCATTCTTAATTTTAA+TGG - chr8.4:60378506-60378525 MS.gene92392:CDS 20.0%
!!! ATTCTTTTTCAAATTGACTT+TGG + chr8.4:60376180-60376199 None:intergenic 20.0%
!!! ATTGATAATTTCTACTTAAC+AGG - chr8.4:60377447-60377466 MS.gene92392:intron 20.0%
!!! ATTTTCAAAATTACTTTGTC+AGG - chr8.4:60378620-60378639 MS.gene92392:CDS 20.0%
!!! ATTTTTTACATTTTCTTTGG+GGG - chr8.4:60377178-60377197 MS.gene92392:intron 20.0%
!!! CATTTTTTACATTTTCTTTG+GGG - chr8.4:60377177-60377196 MS.gene92392:intron 20.0%
!!! TTGGTATGTAAAATTTGTTA+TGG - chr8.4:60377619-60377638 MS.gene92392:intron 20.0%
!!! TTTTCAAAATTACTTTGTCA+GGG - chr8.4:60378621-60378640 MS.gene92392:CDS 20.0%
! AAATTAGTCATGAATGTTCA+AGG - chr8.4:60375595-60375614 MS.gene92392:intron 25.0%
! AATAATCCTTCAAACCAATT+TGG - chr8.4:60375730-60375749 MS.gene92392:CDS 25.0%
! AATGGAAATAAAAACATCCA+AGG - chr8.4:60375977-60375996 MS.gene92392:intron 25.0%
! ACAAAACATCTTAAAAAGAG+CGG + chr8.4:60376238-60376257 None:intergenic 25.0%
! AGAGACATTATATCTAGAAA+TGG - chr8.4:60376350-60376369 MS.gene92392:intron 25.0%
! ATCAATTAGGAATTTAGAAG+AGG + chr8.4:60377841-60377860 None:intergenic 25.0%
! ATGAAATGTTTAGAGATGAA+TGG - chr8.4:60378745-60378764 MS.gene92392:CDS 25.0%
! ATGAATGGGATGATAATTAT+TGG - chr8.4:60378760-60378779 MS.gene92392:CDS 25.0%
! ATGGAAATAAAAACATCCAA+GGG - chr8.4:60375978-60375997 MS.gene92392:intron 25.0%
! CAAAATGAATATGATTTACC+TGG + chr8.4:60375444-60375463 None:intergenic 25.0%
! CAATATATGTTTCCATACTT+TGG - chr8.4:60377600-60377619 MS.gene92392:intron 25.0%
! CTTGATTAAATAGGCTAAAA+CGG - chr8.4:60375486-60375505 MS.gene92392:CDS 25.0%
! GAAAGTTAAAAGACTAAACA+CGG + chr8.4:60377089-60377108 None:intergenic 25.0%
! GAAGTTTGTATTAACCTTAT+AGG + chr8.4:60378043-60378062 None:intergenic 25.0%
! GATTTACTAAAGTGGTTTAT+GGG - chr8.4:60377402-60377421 MS.gene92392:intron 25.0%
! GTAACACATACAAGAATAAT+AGG - chr8.4:60376109-60376128 MS.gene92392:CDS 25.0%
! TAAACCACTTTAGTAAATCA+AGG + chr8.4:60377401-60377420 None:intergenic 25.0%
! TAAAGATTTCTATCAATCCA+TGG - chr8.4:60378252-60378271 MS.gene92392:CDS 25.0%
! TATATTGTATAGAACTAGTG+TGG + chr8.4:60377061-60377080 None:intergenic 25.0%
! TGAAATGTTTAGAGATGAAT+GGG - chr8.4:60378746-60378765 MS.gene92392:CDS 25.0%
! TGAATACCAAAGTAAATTTC+AGG - chr8.4:60376719-60376738 MS.gene92392:intron 25.0%
! TGAATGGGATGATAATTATT+GGG - chr8.4:60378761-60378780 MS.gene92392:CDS 25.0%
! TGATTTACTAAAGTGGTTTA+TGG - chr8.4:60377401-60377420 MS.gene92392:intron 25.0%
! TGGAGTAGATTGAAAAAAAA+TGG + chr8.4:60377041-60377060 None:intergenic 25.0%
! TTACTGGTAAACAAAAATCA+AGG + chr8.4:60377328-60377347 None:intergenic 25.0%
!! AAAGATTGTGCAAATTTTAC+TGG + chr8.4:60377344-60377363 None:intergenic 25.0%
!! AATAGTGTTTATATAATGGG+AGG + chr8.4:60376988-60377007 None:intergenic 25.0%
!! CATACTTTTGTATATGTGAA+AGG + chr8.4:60375570-60375589 None:intergenic 25.0%
!! GTACTCAACATGATATATTT+TGG + chr8.4:60376684-60376703 None:intergenic 25.0%
!! TTTCTTCTTTTCTTCCTTTT+TGG + chr8.4:60376459-60376478 None:intergenic 25.0%
!!! AACAGGTTGTGATTTTAATT+GGG - chr8.4:60377464-60377483 MS.gene92392:intron 25.0%
!!! ACAAAAATCAAGGTCTTATT+TGG + chr8.4:60377318-60377337 None:intergenic 25.0%
!!! ACACTAGTTCTATACAATAT+AGG - chr8.4:60377060-60377079 MS.gene92392:intron 25.0%
!!! TAACAGGTTGTGATTTTAAT+TGG - chr8.4:60377463-60377482 MS.gene92392:intron 25.0%
!!! TCTTAATTTTAATGGAGCAA+TGG - chr8.4:60378514-60378533 MS.gene92392:CDS 25.0%
!!! TTATTTTTCTCGTTACTTCA+TGG - chr8.4:60378335-60378354 MS.gene92392:CDS 25.0%
!!! TTTCATTGGTTTAACCTATA+AGG - chr8.4:60378026-60378045 MS.gene92392:intron 25.0%
!!! TTTTTTACATTTTCTTTGGG+GGG - chr8.4:60377179-60377198 MS.gene92392:intron 25.0%
AAGACCTTGATTTACTAAAG+TGG - chr8.4:60377394-60377413 MS.gene92392:intron 30.0%
AATAATAAATTATCGTGGCC+AGG - chr8.4:60378129-60378148 MS.gene92392:intron 30.0%
AATCTTCCAAGACATATCAT+GGG - chr8.4:60375076-60375095 MS.gene92392:intron 30.0%
ACTTGACCTGAAATTTACTT+TGG + chr8.4:60376728-60376747 None:intergenic 30.0%
AGTACATAATTATGTGAACG+AGG + chr8.4:60376950-60376969 None:intergenic 30.0%
ATGACATGTCTTGTCTTTAT+TGG + chr8.4:60375756-60375775 None:intergenic 30.0%
ATTCCTTTCCTAGAAACAAA+TGG - chr8.4:60377925-60377944 MS.gene92392:intron 30.0%
CGTAAGAACACTCTTAATTA+AGG - chr8.4:60376401-60376420 MS.gene92392:intron 30.0%
TGTCTCTTCGAAATTAAGAA+TGG + chr8.4:60376337-60376356 None:intergenic 30.0%
TGTTTGTCATCTATCTAATG+TGG - chr8.4:60377010-60377029 MS.gene92392:intron 30.0%
TTTATGGGATGTTCAATCTT+TGG - chr8.4:60377417-60377436 MS.gene92392:intron 30.0%
TTTCATCATCTCTTCTTCAT+CGG + chr8.4:60378227-60378246 None:intergenic 30.0%
TTTGACAATTGTAAAGGGTA+AGG - chr8.4:60378567-60378586 MS.gene92392:CDS 30.0%
! GCTGTGTTCCAAAATATTTT+AGG - chr8.4:60376807-60376826 MS.gene92392:intron 30.0%
! TTACTGTTCCATTTGTTTCT+AGG + chr8.4:60377936-60377955 None:intergenic 30.0%
!! TACGTTGTTTTCAAAACCAA+TGG + chr8.4:60375843-60375862 None:intergenic 30.0%
ACAATTGTAAAGGGTAAGGT+AGG - chr8.4:60378571-60378590 MS.gene92392:CDS 35.0%
ACCATTGAAGATAATCGTGT+TGG - chr8.4:60377955-60377974 MS.gene92392:intron 35.0%
AGATATTGCAAGACTAGCAA+AGG - chr8.4:60377516-60377535 MS.gene92392:intron 35.0%
AGATTTCTATCAATCCATGG+AGG - chr8.4:60378255-60378274 MS.gene92392:CDS 35.0%
AGGATCAGAGTCTGATTTAT+GGG + chr8.4:60374996-60375015 None:intergenic 35.0%
AGTAGAGAATCCATCTTCAA+AGG + chr8.4:60377737-60377756 None:intergenic 35.0%
ATAAGCATACACACTTGCAA+TGG + chr8.4:60378319-60378338 None:intergenic 35.0%
ATCAATCCATGGAGGAAAAT+GGG - chr8.4:60378263-60378282 MS.gene92392:CDS 35.0%
ATCTTCCAAGACATATCATG+GGG - chr8.4:60375077-60375096 MS.gene92392:intron 35.0%
ATGCCATAATTCACTGTACA+GGG - chr8.4:60377764-60377783 MS.gene92392:intron 35.0%
ATGGTAGAGGCGATAAAAAT+AGG + chr8.4:60375824-60375843 None:intergenic 35.0%
ATGGTTAAAGTTGCAGTGAT+CGG - chr8.4:60374866-60374885 MS.gene92392:CDS 35.0%
ATGTGTATATGAAGATGGCT+TGG - chr8.4:60377708-60377727 MS.gene92392:intron 35.0%
CAATCTTCCAAGACATATCA+TGG - chr8.4:60375075-60375094 MS.gene92392:intron 35.0%
CATGATATGTCTTGGAAGAT+TGG + chr8.4:60375077-60375096 None:intergenic 35.0%
CCATTGAAGATAATCGTGTT+GGG - chr8.4:60377956-60377975 MS.gene92392:intron 35.0%
CGGAAAACATGTATGCAAAT+AGG - chr8.4:60375506-60375525 MS.gene92392:CDS 35.0%
CTTGTCTTTATTGGCCAAAT+TGG + chr8.4:60375747-60375766 None:intergenic 35.0%
GAAATAAAAACATCCAAGGG+TGG - chr8.4:60375981-60376000 MS.gene92392:intron 35.0%
GGAAAAACGTGTTTGTATAG+TGG + chr8.4:60377982-60378001 None:intergenic 35.0%
TATCAATCCATGGAGGAAAA+TGG - chr8.4:60378262-60378281 MS.gene92392:CDS 35.0%
TGATTTATGGGTGTATATCC+AGG + chr8.4:60374984-60375003 None:intergenic 35.0%
TTACCCTGTACAGTGAATTA+TGG + chr8.4:60377770-60377789 None:intergenic 35.0%
TTCATCATCTCTTCTTCATC+GGG + chr8.4:60378226-60378245 None:intergenic 35.0%
! ATTTTTATCGCCTCTACCAT+TGG - chr8.4:60375824-60375843 MS.gene92392:intron 35.0%
! GTTTTCAAAACCAATGGTAG+AGG + chr8.4:60375837-60375856 None:intergenic 35.0%
!! GTTCCATTTGTTTCTAGGAA+AGG + chr8.4:60377931-60377950 None:intergenic 35.0%
!! TATTGGCCAAATTGGTTTGA+AGG + chr8.4:60375739-60375758 None:intergenic 35.0%
!! TTGTTTCTAGGAAAGGAATG+TGG + chr8.4:60377924-60377943 None:intergenic 35.0%
!!! CTTTTTTGTCTCGTAAGTGT+AGG + chr8.4:60377377-60377396 None:intergenic 35.0%
!!! GTTGTGATTTTAATTGGGCT+AGG - chr8.4:60377469-60377488 MS.gene92392:intron 35.0%
!!! TCTTCCTTTTTGGTTTGTGT+TGG + chr8.4:60376449-60376468 None:intergenic 35.0%
!!! TGAAGAAGTGCTTCGTTTTT+TGG - chr8.4:60375159-60375178 MS.gene92392:intron 35.0%
AAACCAATGAAAGAGAGCCA+TGG + chr8.4:60378018-60378037 None:intergenic 40.0%
AACTTCCTACCCTTCAAATC+TGG + chr8.4:60377568-60377587 None:intergenic 40.0%
AAGAACCCCATGATATGTCT+TGG + chr8.4:60375085-60375104 None:intergenic 40.0%
AAGACCGAAACCAGATTTGA+AGG - chr8.4:60377555-60377574 MS.gene92392:intron 40.0%
ACATCTTAAAAAGAGCGGCT+TGG + chr8.4:60376233-60376252 None:intergenic 40.0%
AGACCGAAACCAGATTTGAA+GGG - chr8.4:60377556-60377575 MS.gene92392:intron 40.0%
ATTGGCTAGTGGAACAGATT+GGG - chr8.4:60378655-60378674 MS.gene92392:CDS 40.0%
CCCAACACGATTATCTTCAA+TGG + chr8.4:60377959-60377978 None:intergenic 40.0%
CCTAACACGTTGTATGAAAG+CGG - chr8.4:60377222-60377241 MS.gene92392:intron 40.0%
CGCTTTCATACAACGTGTTA+GGG + chr8.4:60377224-60377243 None:intergenic 40.0%
GAGGATCAGAGTCTGATTTA+TGG + chr8.4:60374997-60375016 None:intergenic 40.0%
GATGCCATAATTCACTGTAC+AGG - chr8.4:60377763-60377782 MS.gene92392:intron 40.0%
TAAAACCCTAGCAATCCACT+TGG + chr8.4:60378185-60378204 None:intergenic 40.0%
TCACACTGAAAGCAATTTCC+TGG + chr8.4:60378150-60378169 None:intergenic 40.0%
TCCTCATTCTTTCAAAGACC+AGG - chr8.4:60375423-60375442 MS.gene92392:CDS 40.0%
TGAAAGTTGAGAGGAAAGGA+GGG - chr8.4:60375239-60375258 MS.gene92392:intron 40.0%
TGATTGAGTTACAAGCCAAG+TGG - chr8.4:60378167-60378186 MS.gene92392:intron 40.0%
TTGGAGGGACAATATGTTGA+TGG - chr8.4:60378695-60378714 MS.gene92392:CDS 40.0%
! AATGGGAGGTGTACTTCTAA+AGG + chr8.4:60376974-60376993 None:intergenic 40.0%
! ACCTGGTCTTTGAAAGAATG+AGG + chr8.4:60375427-60375446 None:intergenic 40.0%
! AGATGGATTCTCTACTCATG+CGG - chr8.4:60377741-60377760 MS.gene92392:intron 40.0%
! AGGATTTTGCTGGTGAGTTT+GGG - chr8.4:60375182-60375201 MS.gene92392:intron 40.0%
! ATGGGAGGTGTACTTCTAAA+GGG + chr8.4:60376973-60376992 None:intergenic 40.0%
! CCACGAAAGTTTTCAATACC+AGG + chr8.4:60375373-60375392 None:intergenic 40.0%
! CCTGGTATTGAAAACTTTCG+TGG - chr8.4:60375370-60375389 MS.gene92392:CDS 40.0%
! CTACCCTTCAAATCTGGTTT+CGG + chr8.4:60377562-60377581 None:intergenic 40.0%
! TGACTACAAACATTGGCTAG+TGG - chr8.4:60378644-60378663 MS.gene92392:CDS 40.0%
! TGTGAACTGTTTCTCTGGTT+GGG + chr8.4:60375030-60375049 None:intergenic 40.0%
!! GAGTCAAGAAGTGTTTGAAG+CGG - chr8.4:60375300-60375319 MS.gene92392:intron 40.0%
!! TGCTAGGGTTTTATCTGGTA+AGG - chr8.4:60378192-60378211 MS.gene92392:intron 40.0%
!! TGGATTGCTAGGGTTTTATC+TGG - chr8.4:60378187-60378206 MS.gene92392:intron 40.0%
!! TGTGTGTTCAGGTCATTTTG+TGG - chr8.4:60375327-60375346 MS.gene92392:intron 40.0%
!! TTTACATTTTCTTTGGGGGG+TGG - chr8.4:60377182-60377201 MS.gene92392:intron 40.0%
!!! AGAAGTGCTTCGTTTTTTGG+AGG - chr8.4:60375162-60375181 MS.gene92392:intron 40.0%
!!! CGTTTTTTGGAGGATTTTGC+TGG - chr8.4:60375172-60375191 MS.gene92392:intron 40.0%
!!! TAGAAGTCTTTTTCGGTGTG+TGG - chr8.4:60376487-60376506 MS.gene92392:intron 40.0%
AAGCGAATGAGTTTGACGCT+TGG + chr8.4:60378293-60378312 None:intergenic 45.0%
AAGCGGTGGAAAGGAAAACA+TGG - chr8.4:60375933-60375952 MS.gene92392:CDS 45.0%
AAGGGTGGTAATAGCTTCGT+GGG - chr8.4:60375996-60376015 MS.gene92392:intron 45.0%
AGCGAATGAGTTTGACGCTT+GGG + chr8.4:60378292-60378311 None:intergenic 45.0%
AGCGGTGGAAAGGAAAACAT+GGG - chr8.4:60375934-60375953 MS.gene92392:CDS 45.0%
CCGCTTTCATACAACGTGTT+AGG + chr8.4:60377225-60377244 None:intergenic 45.0%
CGAAACCAGATTTGAAGGGT+AGG - chr8.4:60377560-60377579 MS.gene92392:intron 45.0%
CTCGCCAACACAAACCAAAA+AGG - chr8.4:60376442-60376461 MS.gene92392:intron 45.0%
GAAGCGGTTATTGTGTGTTC+AGG - chr8.4:60375316-60375335 MS.gene92392:intron 45.0%
GTCAGGGTGACTACAAACAT+TGG - chr8.4:60378637-60378656 MS.gene92392:CDS 45.0%
GTGAAAGTTGAGAGGAAAGG+AGG - chr8.4:60375238-60375257 MS.gene92392:intron 45.0%
GTGGTGAAAGTTGAGAGGAA+AGG - chr8.4:60375235-60375254 MS.gene92392:intron 45.0%
TCACCACCTCCGTTTCAAAT+CGG + chr8.4:60375222-60375241 None:intergenic 45.0%
TCATACAACGTGTTAGGGCT+CGG + chr8.4:60377219-60377238 None:intergenic 45.0%
TCTCAAAAACGACGACGTTG+TGG + chr8.4:60374940-60374959 None:intergenic 45.0%
TGGGATGCTATCATACAGAG+TGG - chr8.4:60378780-60378799 MS.gene92392:CDS 45.0%
TTGTCCCTCCAATCTTCCAA+TGG + chr8.4:60378687-60378706 None:intergenic 45.0%
TTTGAGAAGAACAACCGCGT+CGG - chr8.4:60374953-60374972 MS.gene92392:CDS 45.0%
! ACTGCTGTGAACTGTTTCTC+TGG + chr8.4:60375035-60375054 None:intergenic 45.0%
! CATTGGCTAGTGGAACAGAT+TGG - chr8.4:60378654-60378673 MS.gene92392:CDS 45.0%
! CTGTGAACTGTTTCTCTGGT+TGG + chr8.4:60375031-60375050 None:intergenic 45.0%
! GAGGATTTTGCTGGTGAGTT+TGG - chr8.4:60375181-60375200 MS.gene92392:intron 45.0%
!! ACAAGCCAAGTGGATTGCTA+GGG - chr8.4:60378177-60378196 MS.gene92392:intron 45.0%
!! TACAAGCCAAGTGGATTGCT+AGG - chr8.4:60378176-60378195 MS.gene92392:intron 45.0%
!! TTAAATTAAAAAAAATCAAT+AGG - chr8.4:60378488-60378507 MS.gene92392:CDS 5.0%
!! TTATATATATAATATCAATT+AGG + chr8.4:60377854-60377873 None:intergenic 5.0%
AGTTGAGAGGAAAGGAGGGA+AGG - chr8.4:60375243-60375262 MS.gene92392:intron 50.0%
AGTTTGTGGACATCAAGCGG+TGG - chr8.4:60375919-60375938 MS.gene92392:CDS 50.0%
CAAGGGTGGTAATAGCTTCG+TGG - chr8.4:60375995-60376014 MS.gene92392:intron 50.0%
CACCACCTCCGTTTCAAATC+GGG + chr8.4:60375221-60375240 None:intergenic 50.0%
CACGAAGCTATTACCACCCT+TGG + chr8.4:60375997-60376016 None:intergenic 50.0%
CCAGGAACCAAAGCAAGTCT+CGG + chr8.4:60375355-60375374 None:intergenic 50.0%
CCTTTGTCCAAGCGAGAATC+CGG - chr8.4:60375112-60375131 MS.gene92392:intron 50.0%
CGGAAACGTTCTTGGATCAC+CGG + chr8.4:60375134-60375153 None:intergenic 50.0%
CGGAGTTTGTGGACATCAAG+CGG - chr8.4:60375916-60375935 MS.gene92392:CDS 50.0%
CGGATTCTCGCTTGGACAAA+GGG + chr8.4:60375114-60375133 None:intergenic 50.0%
CGGTAACACTTCATGTCGCT+CGG + chr8.4:60376090-60376109 None:intergenic 50.0%
CGGTGATCCAAGAACGTTTC+CGG - chr8.4:60375132-60375151 MS.gene92392:intron 50.0%
CTGGTTGGGTCTATGCTTAG+AGG + chr8.4:60375016-60375035 None:intergenic 50.0%
CTTCGTGGGTTTCTCATGCA+TGG - chr8.4:60376010-60376029 MS.gene92392:intron 50.0%
GCACCATGGCTCTCTTTCAT+TGG - chr8.4:60378012-60378031 MS.gene92392:intron 50.0%
GCCTCCATTGGAAGATTGGA+GGG - chr8.4:60378680-60378699 MS.gene92392:CDS 50.0%
GCGGTGGAAAGGAAAACATG+GGG - chr8.4:60375935-60375954 MS.gene92392:CDS 50.0%
GGTGATCCAAGAACGTTTCC+GGG - chr8.4:60375133-60375152 MS.gene92392:intron 50.0%
TCATGACCCGGAAACGTTCT+TGG + chr8.4:60375142-60375161 None:intergenic 50.0%
TCCCTCCAATCTTCCAATGG+AGG + chr8.4:60378684-60378703 None:intergenic 50.0%
TGCCTCCATTGGAAGATTGG+AGG - chr8.4:60378679-60378698 MS.gene92392:CDS 50.0%
TTCCTCCTTCACTAGCACCA+TGG - chr8.4:60377998-60378017 MS.gene92392:intron 50.0%
! CGAAGCACTTCTTCATGACC+CGG + chr8.4:60375154-60375173 None:intergenic 50.0%
! CGGGTTGACCCGATTTGAAA+CGG - chr8.4:60375210-60375229 MS.gene92392:intron 50.0%
! CTGGTGAGTTTGGGATACAC+GGG - chr8.4:60375191-60375210 MS.gene92392:intron 50.0%
! GCTGGTGAGTTTGGGATACA+CGG - chr8.4:60375190-60375209 MS.gene92392:intron 50.0%
! GGCTTGGTTGCCTTTGAAGA+TGG - chr8.4:60377724-60377743 MS.gene92392:intron 50.0%
! GGGTAACCCATTTTCCTCCA+TGG + chr8.4:60378272-60378291 None:intergenic 50.0%
! GTTGACCCGATTTGAAACGG+AGG - chr8.4:60375213-60375232 MS.gene92392:intron 50.0%
! TGTGGAACCGAGACTTGCTT+TGG - chr8.4:60375345-60375364 MS.gene92392:intron 50.0%
! TTCTTGCTGTAGCTCCTTGG+CGG + chr8.4:60374915-60374934 None:intergenic 50.0%
!! TTTCTTTGGGGGGTGGATTG+TGG - chr8.4:60377189-60377208 MS.gene92392:intron 50.0%
AAAGTTGCAGTGATCGGCGC+CGG - chr8.4:60374872-60374891 MS.gene92392:CDS 55.0%
AAGCACACGAGCGGAGTTTG+TGG - chr8.4:60375905-60375924 MS.gene92392:CDS 55.0%
ACAGATTGGGCTGCCTCCAT+TGG - chr8.4:60378668-60378687 MS.gene92392:CDS 55.0%
AGAGGAAAGGAGGGAAGGAG+TGG - chr8.4:60375248-60375267 MS.gene92392:intron 55.0%
AGGAGTGGGTGGTTGAGTCA+AGG - chr8.4:60375263-60375282 MS.gene92392:intron 55.0%
ATATCCAGGTTCCTCCGACG+CGG + chr8.4:60374970-60374989 None:intergenic 55.0%
CCGGATTCTCGCTTGGACAA+AGG + chr8.4:60375115-60375134 None:intergenic 55.0%
CGGAGGTGGTGAAAGTTGAG+AGG - chr8.4:60375230-60375249 MS.gene92392:intron 55.0%
GAGGAAAGGAGGGAAGGAGT+GGG - chr8.4:60375249-60375268 MS.gene92392:intron 55.0%
GAGTGGGTGGTTGAGTCAAG+GGG - chr8.4:60375265-60375284 MS.gene92392:intron 55.0%
GCCAAGGAGCTACAGCAAGA+AGG - chr8.4:60374914-60374933 MS.gene92392:CDS 55.0%
GGAGTGGGTGGTTGAGTCAA+GGG - chr8.4:60375264-60375283 MS.gene92392:intron 55.0%
GGCTGCCTCCATTGGAAGAT+TGG - chr8.4:60378676-60378695 MS.gene92392:CDS 55.0%
GTGGACATCAAGCGGTGGAA+AGG - chr8.4:60375924-60375943 MS.gene92392:CDS 55.0%
TGGATCACCGGATTCTCGCT+TGG + chr8.4:60375122-60375141 None:intergenic 55.0%
! ACGAGACGAAAGCACACGAG+CGG - chr8.4:60375896-60375915 MS.gene92392:CDS 55.0%
! AGCCATGGTGCTAGTGAAGG+AGG + chr8.4:60378003-60378022 None:intergenic 55.0%
! CCGAGACTTGCTTTGGTTCC+TGG - chr8.4:60375352-60375371 MS.gene92392:intron 55.0%
! GACCCGATTTGAAACGGAGG+TGG - chr8.4:60375216-60375235 MS.gene92392:intron 55.0%
! GAGAGCCATGGTGCTAGTGA+AGG + chr8.4:60378006-60378025 None:intergenic 55.0%
! GCCTTCTTGCTGTAGCTCCT+TGG + chr8.4:60374918-60374937 None:intergenic 55.0%
CTCCTTGGCGGCAACCATAC+CGG + chr8.4:60374903-60374922 None:intergenic 60.0%
GAAAGGAGGGAAGGAGTGGG+TGG - chr8.4:60375252-60375271 MS.gene92392:intron 60.0%
GAGAAGAACAACCGCGTCGG+AGG - chr8.4:60374956-60374975 MS.gene92392:CDS 60.0%
GGCAACCATACCGGAGACTC+CGG + chr8.4:60374894-60374913 None:intergenic 60.0%
TGGGTGGTTGAGTCAAGGGG+TGG - chr8.4:60375268-60375287 MS.gene92392:intron 60.0%
ACAACCGCGTCGGAGGAACC+TGG - chr8.4:60374963-60374982 MS.gene92392:CDS 65.0%
CTCCGGTATGGTTGCCGCCA+AGG - chr8.4:60374898-60374917 MS.gene92392:CDS 65.0%
! GTGATCGGCGCCGGAGTCTC+CGG - chr8.4:60374881-60374900 MS.gene92392:CDS 70.0%
! CGGCGCCGGAGTCTCCGGTA+TGG - chr8.4:60374886-60374905 MS.gene92392:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 60374866 60378815 60374866 ID=MS.gene92392
chr8.4 mRNA 60374866 60378815 60374866 ID=MS.gene92392.t1;Parent=MS.gene92392
chr8.4 exon 60378237 60378815 60378237 ID=MS.gene92392.t1.exon1;Parent=MS.gene92392.t1
chr8.4 CDS 60378237 60378815 60378237 ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1
chr8.4 exon 60376060 60376212 60376060 ID=MS.gene92392.t1.exon2;Parent=MS.gene92392.t1
chr8.4 CDS 60376060 60376212 60376060 ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1
chr8.4 exon 60375896 60375978 60375896 ID=MS.gene92392.t1.exon3;Parent=MS.gene92392.t1
chr8.4 CDS 60375896 60375978 60375896 ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1
chr8.4 exon 60375634 60375769 60375634 ID=MS.gene92392.t1.exon4;Parent=MS.gene92392.t1
chr8.4 CDS 60375634 60375769 60375634 ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1
chr8.4 exon 60375357 60375530 60375357 ID=MS.gene92392.t1.exon5;Parent=MS.gene92392.t1
chr8.4 CDS 60375357 60375530 60375357 ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1
chr8.4 exon 60374866 60375039 60374866 ID=MS.gene92392.t1.exon6;Parent=MS.gene92392.t1
chr8.4 CDS 60374866 60375039 60374866 ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1
Gene Sequence

>MS.gene92392

ATGGTTAAAGTTGCAGTGATCGGCGCCGGAGTCTCCGGTATGGTTGCCGCCAAGGAGCTACAGCAAGAAGGCCACAACGTCGTCGTTTTTGAGAAGAACAACCGCGTCGGAGGAACCTGGATATACACCCATAAATCAGACTCTGATCCTCTAAGCATAGACCCAACCAGAGAAACAGTTCACAGCAGTGTGTATCTCTCACTACGCACCAATCTTCCAAGACATATCATGGGGTTCTTAGATTACCCTTTGTCCAAGCGAGAATCCGGTGATCCAAGAACGTTTCCGGGTCATGAAGAAGTGCTTCGTTTTTTGGAGGATTTTGCTGGTGAGTTTGGGATACACGGGTTGACCCGATTTGAAACGGAGGTGGTGAAAGTTGAGAGGAAAGGAGGGAAGGAGTGGGTGGTTGAGTCAAGGGGTGGTGACTCAGTGAGTCAAGAAGTGTTTGAAGCGGTTATTGTGTGTTCAGGTCATTTTGTGGAACCGAGACTTGCTTTGGTTCCTGGTATTGAAAACTTTCGTGGCTTTCAAATGCATTCTCATAATTACAGAGTTCCTCATTCTTTCAAAGACCAGGTAAATCATATTCATTTTGTGTTTACTTTTTCTTCAGATTACTTGATTAAATAGGCTAAAACGGAAAACATGTATGCAAATAGGCGAAACATTACAAATATAATCAAAAGTTACACTTAGATCCTTTCACATATACAAAAGTATGCCTTAAAATTAGTCATGAATGTTCAAGGTATGTTTTAATTGATTATGTAAATTCTCCACAAAAAAAAAAAGATTATGTAATCACTAATCACGTGACCAACTTTTTTATTCATTACGTTAGTTATTTTTTTCCAATATATAAATAATCCTTCAAACCAATTTGGCCAATAAAGACAAGACATGTCATTTTAAAATTGCACATTTGAAATTAAGGGTTAAAACAACATTTAAGCCTATTTTTATCGCCTCTACCATTGGTTTTGAAAACAACGTATACTAATTAATTTAATCAGTAGTGCTGAATAGTACGAGACGAAAGCACACGAGCGGAGTTTGTGGACATCAAGCGGTGGAAAGGAAAACATGGGGTGAGATAATATAATTAGTTAATGGAAATAAAAACATCCAAGGGTGGTAATAGCTTCGTGGGTTTCTCATGCATGGTTTCTGTCGTGTAATAAAGCATTTTCCTTAATTTAAAATAGTTTTCTGCGTGTTCCGAGCGACATGAAGTGTTACCGTAACACATACAAGAATAATAGGATATAAAGTGTTGATTTTTTATTTCTAAACTGTTGTATTGAATTTCCAAAGTCAATTTGAAAAAGAATTTTTATTTACGGAACTATGTTGAGTTACGACCAAGCCGCTCTTTTTAAGATGTTTTGTGACAAAATGAACTATGATCTTAAAAATATTTTTTACTTTGAAGGGACATAAATTATCGAAGACTATTCTCTTAAGACCATTCTTAATTTCGAAGAGACATTATATCTAGAAATGGTATATGATCTTATGAACACTATTAATTTCGTAAGAACACTCTTAATTAAGGAGATGTAGAGAAGAAATACTCGCCAACACAAACCAAAAAGGAAGAAAAGAAGAAAAAGATTTTTAGAAGTCTTTTTCGGTGTGTGGAATGAATTATGTAAGCTCTCTATTTATAGAGAAAATTCACAATTAATATATGAGAAACTTTGGGAATAAATAATTCAAATATTACTTTGGGAACAAATAATTCACATATTAGATCTAGTCTATTTGTAAAACAAAAAAAAAATCTAGTACAAAAACATCTCAAATTGAGTACCAAAATATATCATGTTGAGTACAAAAATATATTTTATTGAATACCAAAGTAAATTTCAGGTCAAGTACCAAAATATATTATATTGCATATCAAAATATTTTAGAATGTGCATTTGAATATTTCAAGCTGTGTTCCAAAATATTTTAGGAAAACTTAGGGATTAAGAAAACTTTCTAATAATGATTAAATTAATTATTTAATTTCACATTTTCAAATATATAAATATATAATTTTTCGTTTTATTCAAAAAAATTGTTTATGCTTACCTCGTTCACATAATTATGTACTCCCTTTAGAAGTACACCTCCCATTATATAAACACTATTAATGTTTGTCATCTATCTAATGTGGAACTTCCATTTTTTTTCAATCTACTCCACACTAGTTCTATACAATATAGGACACCGTGTTTAGTCTTTTAACTTTCAATATTCACACACATTCCAACACAAAGTAATTTATTTTTAAATGTGTGTTTTAGTAATATAATCTATACATTTTTTACATTTTCTTTGGGGGGTGGATTGTGGCTCTCCGAGCCCTAACACGTTGTATGAAAGCGGTCTGAATTTAATTTAACAATAACTTATTCATAAACTTTTATACGAAAAGCATTAAATTAAGCATGTTAATCCAAATAAGACCTTGATTTTTGTTTACCAGTAAAATTTGCACAATCTTTTATTAACTGACCTACACTTACGAGACAAAAAAGACCTTGATTTACTAAAGTGGTTTATGGGATGTTCAATCTTTGGATACCTAATTGATAATTTCTACTTAACAGGTTGTGATTTTAATTGGGCTAGGATCTAGTTCATTTGACATCTCAAGAGATATTGCAAGACTAGCAAAGGAAGTTCATGTTGCAACAAGACCGAAACCAGATTTGAAGGGTAGGAAGTTAGAAAATGTTCGCAATATATGTTTCCATACTTTGGTATGTAAAATTTGTTATGGATTTAGCTTCTTACTATAGTATTAGTATTATTGATAATTTTCATTCTATTTATTTTTTTAGATTAAATGTGTATATGAAGATGGCTTGGTTGCCTTTGAAGATGGATTCTCTACTCATGCGGATGCCATAATTCACTGTACAGGGTAACTAGAATTTCTAACATTTTCTCACCTTAATTTTCACATATTTTTCTTTCCTCTTCTAAATTCCTAATTGATATTATATATATAATTAATGATTGAGGCATATAAATCATAATAATATGACAGGTACAAATACCACATTCCTTTCCTAGAAACAAATGGAACAGTAACCATTGAAGATAATCGTGTTGGGCCACTATACAAACACGTTTTTCCTCCTTCACTAGCACCATGGCTCTCTTTCATTGGTTTAACCTATAAGGTTAATACAAACTTCTTTAATAAAAAAGCTAATTTGAAATTTTAATTTTTTTTTATTCAAAACTTATAGTTTACTGAAATTAATAATAAATTATCGTGGCCAGGAAATTGCTTTCAGTGTGATTGAGTTACAAGCCAAGTGGATTGCTAGGGTTTTATCTGGTAAGGTTCTTTTACCCGATGAAGAAGAGATGATGAAATCTATTAAAGATTTCTATCAATCCATGGAGGAAAATGGGTTACCCAAGCGTCAAACTCATTCGCTTCGTCCATTGCAAGTGTGTATGCTTATTTTTCTCGTTACTTCATGGTTCATTTCAAAATTTTGCTATTGATATCATTTAACTTATTAGCGAGAAAAGTCTCTCTGATACACGTTAAATGATATCAATAGATGTCTCAATTATCGTCTTATATAAATATAAGTTTTGTTTGTTTTATTTAAATTAAAAAAAATCAATAGGCATTCTTAATTTTAATGGAGCAATGGATATATTTATAACTTATAACCAATTACAAATTTGACAATTGTAAAGGGTAAGGTAGGTTTAATGTTTTTGAATTTAAGTATTTATTTTCAAAATTACTTTGTCAGGGTGACTACAAACATTGGCTAGTGGAACAGATTGGGCTGCCTCCATTGGAAGATTGGAGGGACAATATGTTGATGGAGTGTTTGAAGAATTCAATTGAAATGAATGAAATGTTTAGAGATGAATGGGATGATAATTATTGGGATGCTATCATACAGAGTGGATCAGCTTCTTAA

Protein sequence

>MS.gene92392.t1

MVKVAVIGAGVSGMVAAKELQQEGHNVVVFEKNNRVGGTWIYTHKSDSDPLSIDPTRETVHSSVYLSLRTNLPRHIMGFLDYPLSKRESGDPRTFPGHEEVLRFLEDFAGEFGIHGLTRFETEVVKVERKGGKEWVVESRGGDSVSQEVFEAVIVCSGHFVEPRLALVPGIENFRGFQMHSHNYRVPHSFKDQVVILIGLGSSSFDISRDIARLAKEVHVATRPKPDLKGRKLENVRNICFHTLIKCVYEDGLVAFEDGFSTHADAIIHCTGYKYHIPFLETNGTVTIEDNRVGPLYKHVFPPSLAPWLSFIGLTYKEIAFSVIELQAKWIARVLSGKVLLPDEEEMMKSIKDFYQSMEENGLPKRQTHSLRPLQGDYKHWLVEQIGLPPLEDWRDNMLMECLKNSIEMNEMFRDEWDDNYWDAIIQSGSAS