Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92392.t1 | XP_003627754.1 | 95.6 | 432 | 19 | 0 | 1 | 432 | 1 | 432 | 8.10E-245 | 855.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92392.t1 | Q9SXD5 | 54.4 | 428 | 182 | 5 | 4 | 421 | 13 | 437 | 9.3e-133 | 474.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92392.t1 | G7LEJ5 | 95.6 | 432 | 19 | 0 | 1 | 432 | 1 | 432 | 5.8e-245 | 855.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene92392 | -0.813517 | 2.46E-51 | -1.69E-46 |
MS.gene049222 | MS.gene92392 | -0.806137 | 9.52E-50 | -1.69E-46 |
MS.gene049259 | MS.gene92392 | 0.834485 | 2.92E-56 | -1.69E-46 |
MS.gene049285 | MS.gene92392 | -0.811196 | 7.90E-51 | -1.69E-46 |
MS.gene049320 | MS.gene92392 | -0.831956 | 1.24E-55 | -1.69E-46 |
MS.gene049402 | MS.gene92392 | 0.824099 | 9.70E-54 | -1.69E-46 |
MS.gene049633 | MS.gene92392 | -0.802876 | 4.56E-49 | -1.69E-46 |
MS.gene049634 | MS.gene92392 | 0.819012 | 1.45E-52 | -1.69E-46 |
MS.gene04986 | MS.gene92392 | 0.815565 | 8.66E-52 | -1.69E-46 |
MS.gene050163 | MS.gene92392 | -0.822491 | 2.30E-53 | -1.69E-46 |
MS.gene050165 | MS.gene92392 | -0.835214 | 1.91E-56 | -1.69E-46 |
MS.gene050173 | MS.gene92392 | 0.808799 | 2.59E-50 | -1.69E-46 |
MS.gene050381 | MS.gene92392 | 0.812395 | 4.33E-51 | -1.69E-46 |
MS.gene050444 | MS.gene92392 | -0.819417 | 1.17E-52 | -1.69E-46 |
MS.gene050504 | MS.gene92392 | -0.836297 | 1.02E-56 | -1.69E-46 |
MS.gene050612 | MS.gene92392 | -0.851143 | 1.08E-60 | -1.69E-46 |
MS.gene050699 | MS.gene92392 | -0.803553 | 3.30E-49 | -1.69E-46 |
MS.gene05079 | MS.gene92392 | 0.818644 | 1.76E-52 | -1.69E-46 |
MS.gene050833 | MS.gene92392 | 0.800789 | 1.22E-48 | -1.69E-46 |
MS.gene050868 | MS.gene92392 | -0.823691 | 1.21E-53 | -1.69E-46 |
MS.gene050871 | MS.gene92392 | -0.820726 | 5.89E-53 | -1.69E-46 |
MS.gene050986 | MS.gene92392 | -0.802607 | 5.18E-49 | -1.69E-46 |
MS.gene051044 | MS.gene92392 | 0.822276 | 2.58E-53 | -1.69E-46 |
MS.gene05104 | MS.gene92392 | 0.810664 | 1.03E-50 | -1.69E-46 |
MS.gene051127 | MS.gene92392 | 0.809719 | 1.65E-50 | -1.69E-46 |
MS.gene051138 | MS.gene92392 | 0.875498 | 2.94E-68 | -1.69E-46 |
MS.gene051366 | MS.gene92392 | 0.807254 | 5.53E-50 | -1.69E-46 |
MS.gene051810 | MS.gene92392 | -0.800524 | 1.38E-48 | -1.69E-46 |
MS.gene051863 | MS.gene92392 | 0.844379 | 7.84E-59 | -1.69E-46 |
MS.gene051949 | MS.gene92392 | -0.815914 | 7.24E-52 | -1.69E-46 |
MS.gene052129 | MS.gene92392 | 0.800585 | 1.35E-48 | -1.69E-46 |
MS.gene053203 | MS.gene92392 | -0.800897 | 1.16E-48 | -1.69E-46 |
MS.gene053488 | MS.gene92392 | 0.82373 | 1.18E-53 | -1.69E-46 |
MS.gene053561 | MS.gene92392 | 0.828682 | 7.85E-55 | -1.69E-46 |
MS.gene053887 | MS.gene92392 | 0.806031 | 1.00E-49 | -1.69E-46 |
MS.gene054056 | MS.gene92392 | 0.847544 | 1.08E-59 | -1.69E-46 |
MS.gene054642 | MS.gene92392 | -0.813134 | 2.99E-51 | -1.69E-46 |
MS.gene054706 | MS.gene92392 | 0.813223 | 2.85E-51 | -1.69E-46 |
MS.gene05470 | MS.gene92392 | -0.819799 | 9.61E-53 | -1.69E-46 |
MS.gene054954 | MS.gene92392 | -0.814882 | 1.23E-51 | -1.69E-46 |
MS.gene055124 | MS.gene92392 | 0.812115 | 4.99E-51 | -1.69E-46 |
MS.gene055154 | MS.gene92392 | 0.819413 | 1.18E-52 | -1.69E-46 |
MS.gene055362 | MS.gene92392 | -0.828969 | 6.69E-55 | -1.69E-46 |
MS.gene055502 | MS.gene92392 | -0.822344 | 2.49E-53 | -1.69E-46 |
MS.gene055577 | MS.gene92392 | -0.816791 | 4.61E-52 | -1.69E-46 |
MS.gene055748 | MS.gene92392 | -0.806863 | 6.69E-50 | -1.69E-46 |
MS.gene055751 | MS.gene92392 | -0.820061 | 8.37E-53 | -1.69E-46 |
MS.gene055776 | MS.gene92392 | -0.828742 | 7.59E-55 | -1.69E-46 |
MS.gene05589 | MS.gene92392 | -0.814147 | 1.79E-51 | -1.69E-46 |
MS.gene055942 | MS.gene92392 | 0.818448 | 1.95E-52 | -1.69E-46 |
MS.gene055956 | MS.gene92392 | 0.806829 | 6.80E-50 | -1.69E-46 |
MS.gene056188 | MS.gene92392 | 0.814853 | 1.25E-51 | -1.69E-46 |
MS.gene056224 | MS.gene92392 | 0.83629 | 1.02E-56 | -1.69E-46 |
MS.gene056504 | MS.gene92392 | -0.827998 | 1.15E-54 | -1.69E-46 |
MS.gene056657 | MS.gene92392 | -0.814542 | 1.46E-51 | -1.69E-46 |
MS.gene056761 | MS.gene92392 | 0.8136 | 2.36E-51 | -1.69E-46 |
MS.gene056856 | MS.gene92392 | 0.84325 | 1.57E-58 | -1.69E-46 |
MS.gene057246 | MS.gene92392 | -0.809938 | 1.48E-50 | -1.69E-46 |
MS.gene058068 | MS.gene92392 | 0.808137 | 3.59E-50 | -1.69E-46 |
MS.gene058099 | MS.gene92392 | 0.823297 | 1.49E-53 | -1.69E-46 |
MS.gene058109 | MS.gene92392 | 0.810088 | 1.37E-50 | -1.69E-46 |
MS.gene058117 | MS.gene92392 | 0.813342 | 2.69E-51 | -1.69E-46 |
MS.gene058171 | MS.gene92392 | 0.814255 | 1.69E-51 | -1.69E-46 |
MS.gene058173 | MS.gene92392 | 0.800805 | 1.21E-48 | -1.69E-46 |
MS.gene058175 | MS.gene92392 | 0.819596 | 1.07E-52 | -1.69E-46 |
MS.gene058268 | MS.gene92392 | 0.802906 | 4.49E-49 | -1.69E-46 |
MS.gene058334 | MS.gene92392 | 0.814276 | 1.67E-51 | -1.69E-46 |
MS.gene058419 | MS.gene92392 | -0.81734 | 3.47E-52 | -1.69E-46 |
MS.gene058452 | MS.gene92392 | 0.817305 | 3.53E-52 | -1.69E-46 |
MS.gene058603 | MS.gene92392 | 0.812444 | 4.23E-51 | -1.69E-46 |
MS.gene058773 | MS.gene92392 | -0.801792 | 7.62E-49 | -1.69E-46 |
MS.gene059022 | MS.gene92392 | -0.842831 | 2.03E-58 | -1.69E-46 |
MS.gene059045 | MS.gene92392 | 0.811487 | 6.83E-51 | -1.69E-46 |
MS.gene059677 | MS.gene92392 | -0.841956 | 3.47E-58 | -1.69E-46 |
MS.gene059691 | MS.gene92392 | 0.805609 | 1.23E-49 | -1.69E-46 |
MS.gene059694 | MS.gene92392 | 0.803691 | 3.09E-49 | -1.69E-46 |
MS.gene059697 | MS.gene92392 | 0.80962 | 1.73E-50 | -1.69E-46 |
MS.gene059865 | MS.gene92392 | -0.830004 | 3.75E-55 | -1.69E-46 |
MS.gene060405 | MS.gene92392 | 0.833343 | 5.63E-56 | -1.69E-46 |
MS.gene060762 | MS.gene92392 | -0.831853 | 1.32E-55 | -1.69E-46 |
MS.gene06077 | MS.gene92392 | -0.803949 | 2.73E-49 | -1.69E-46 |
MS.gene060982 | MS.gene92392 | -0.800822 | 1.20E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92392.t1 | MTR_8g037880 | 95.602 | 432 | 19 | 0 | 1 | 432 | 1 | 432 | 0.0 | 859 |
MS.gene92392.t1 | MTR_8g037910 | 87.269 | 432 | 54 | 1 | 1 | 432 | 1 | 431 | 0.0 | 788 |
MS.gene92392.t1 | MTR_8g037910 | 90.852 | 317 | 28 | 1 | 1 | 317 | 1 | 316 | 0.0 | 592 |
MS.gene92392.t1 | MTR_8g037910 | 90.842 | 273 | 24 | 1 | 1 | 273 | 1 | 272 | 0.0 | 507 |
MS.gene92392.t1 | MTR_5g012130 | 54.060 | 431 | 188 | 4 | 4 | 427 | 13 | 440 | 3.92e-160 | 459 |
MS.gene92392.t1 | MTR_5g012130 | 55.975 | 318 | 137 | 2 | 4 | 318 | 33 | 350 | 1.07e-118 | 350 |
MS.gene92392.t1 | MTR_3g437580 | 42.438 | 443 | 232 | 8 | 4 | 432 | 13 | 446 | 5.71e-118 | 352 |
MS.gene92392.t1 | MTR_3g437580 | 43.027 | 337 | 176 | 6 | 4 | 325 | 13 | 348 | 3.32e-88 | 272 |
MS.gene92392.t1 | MTR_5g012130 | 52.016 | 248 | 116 | 2 | 4 | 248 | 33 | 280 | 2.81e-77 | 242 |
MS.gene92392.t1 | MTR_7g107710 | 23.488 | 281 | 175 | 6 | 4 | 279 | 6 | 251 | 2.15e-17 | 84.0 |
MS.gene92392.t1 | MTR_1g011630 | 25.114 | 219 | 135 | 6 | 6 | 223 | 18 | 208 | 2.31e-17 | 84.0 |
MS.gene92392.t1 | MTR_3g109520 | 27.619 | 210 | 123 | 6 | 6 | 212 | 41 | 224 | 5.55e-17 | 82.8 |
MS.gene92392.t1 | MTR_2g450510 | 26.877 | 253 | 128 | 8 | 3 | 222 | 4 | 232 | 5.77e-16 | 80.1 |
MS.gene92392.t1 | MTR_2g450310 | 26.877 | 253 | 128 | 8 | 3 | 222 | 4 | 232 | 3.19e-15 | 77.8 |
MS.gene92392.t1 | MTR_2g043850 | 26.923 | 208 | 101 | 7 | 3 | 184 | 13 | 195 | 2.32e-14 | 75.5 |
MS.gene92392.t1 | MTR_7g107690 | 23.013 | 239 | 151 | 6 | 3 | 236 | 7 | 217 | 3.90e-14 | 73.9 |
MS.gene92392.t1 | MTR_2g044140 | 27.404 | 208 | 100 | 7 | 3 | 184 | 13 | 195 | 1.05e-13 | 73.2 |
MS.gene92392.t1 | MTR_1g008380 | 24.880 | 209 | 129 | 6 | 6 | 212 | 44 | 226 | 2.08e-12 | 68.9 |
MS.gene92392.t1 | MTR_5g033260 | 24.762 | 210 | 131 | 5 | 4 | 211 | 6 | 190 | 3.81e-12 | 67.8 |
MS.gene92392.t1 | MTR_2g020630 | 24.280 | 243 | 127 | 8 | 3 | 213 | 13 | 230 | 8.60e-12 | 67.4 |
MS.gene92392.t1 | MTR_8g432640 | 21.622 | 222 | 147 | 5 | 4 | 223 | 6 | 202 | 4.25e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene92392.t1 | AT1G62620 | 54.439 | 428 | 182 | 5 | 4 | 421 | 13 | 437 | 3.24e-164 | 470 |
MS.gene92392.t1 | AT1G63370 | 53.972 | 428 | 184 | 5 | 4 | 421 | 13 | 437 | 1.49e-162 | 466 |
MS.gene92392.t1 | AT1G12140 | 53.647 | 425 | 191 | 3 | 2 | 421 | 11 | 434 | 1.63e-156 | 451 |
MS.gene92392.t1 | AT1G12140 | 53.647 | 425 | 191 | 3 | 2 | 421 | 11 | 434 | 1.63e-156 | 451 |
MS.gene92392.t1 | AT1G12200 | 53.037 | 428 | 190 | 4 | 4 | 421 | 14 | 440 | 4.66e-156 | 449 |
MS.gene92392.t1 | AT1G62600 | 52.459 | 427 | 194 | 3 | 4 | 421 | 13 | 439 | 1.67e-153 | 442 |
MS.gene92392.t1 | AT1G12140 | 53.176 | 425 | 191 | 4 | 2 | 421 | 11 | 432 | 7.56e-153 | 441 |
MS.gene92392.t1 | AT1G62620 | 56.800 | 375 | 155 | 3 | 4 | 371 | 13 | 387 | 5.41e-151 | 434 |
MS.gene92392.t1 | AT1G65860 | 50.474 | 422 | 203 | 4 | 4 | 420 | 13 | 433 | 1.36e-149 | 433 |
MS.gene92392.t1 | AT1G12160 | 49.658 | 439 | 196 | 6 | 4 | 420 | 12 | 447 | 1.82e-149 | 433 |
MS.gene92392.t1 | AT1G62560 | 49.052 | 422 | 210 | 3 | 4 | 420 | 13 | 434 | 1.51e-147 | 428 |
MS.gene92392.t1 | AT1G12130 | 51.778 | 450 | 186 | 8 | 4 | 429 | 13 | 455 | 1.66e-146 | 426 |
MS.gene92392.t1 | AT1G62580 | 52.471 | 425 | 194 | 5 | 4 | 421 | 14 | 437 | 3.66e-146 | 424 |
MS.gene92392.t1 | AT1G62540 | 51.896 | 422 | 197 | 4 | 4 | 420 | 13 | 433 | 2.92e-145 | 422 |
MS.gene92392.t1 | AT1G62570 | 51.064 | 423 | 199 | 5 | 4 | 420 | 13 | 433 | 7.33e-144 | 418 |
MS.gene92392.t1 | AT1G62600 | 54.907 | 377 | 161 | 3 | 4 | 371 | 13 | 389 | 1.05e-141 | 410 |
MS.gene92392.t1 | AT1G62540 | 49.217 | 447 | 196 | 5 | 4 | 420 | 13 | 458 | 3.12e-141 | 412 |
MS.gene92392.t1 | AT1G62560 | 51.459 | 377 | 178 | 3 | 4 | 375 | 13 | 389 | 2.40e-138 | 402 |
MS.gene92392.t1 | AT1G62580 | 48.690 | 458 | 194 | 7 | 4 | 421 | 14 | 470 | 1.45e-137 | 404 |
MS.gene92392.t1 | AT1G62540 | 49.289 | 422 | 190 | 5 | 4 | 420 | 13 | 415 | 3.79e-132 | 388 |
MS.gene92392.t1 | AT1G63340 | 47.518 | 423 | 178 | 4 | 4 | 421 | 14 | 397 | 5.13e-131 | 384 |
MS.gene92392.t1 | AT5G61290 | 45.708 | 431 | 215 | 5 | 4 | 420 | 16 | 441 | 2.51e-127 | 376 |
MS.gene92392.t1 | AT1G63370 | 57.009 | 321 | 131 | 3 | 4 | 317 | 13 | 333 | 2.61e-126 | 369 |
MS.gene92392.t1 | AT1G12200 | 56.522 | 322 | 132 | 2 | 4 | 317 | 14 | 335 | 1.60e-121 | 358 |
MS.gene92392.t1 | AT5G07800 | 42.824 | 432 | 230 | 7 | 3 | 420 | 15 | 443 | 6.19e-117 | 350 |
MS.gene92392.t1 | AT1G62580 | 54.985 | 331 | 132 | 4 | 4 | 317 | 14 | 344 | 4.93e-111 | 331 |
MS.gene92392.t1 | AT1G63390 | 59.441 | 143 | 51 | 2 | 4 | 139 | 13 | 155 | 2.52e-43 | 150 |
MS.gene92392.t1 | AT1G19250 | 29.461 | 241 | 115 | 8 | 3 | 212 | 12 | 228 | 3.31e-17 | 84.3 |
MS.gene92392.t1 | AT5G45180 | 24.318 | 440 | 206 | 19 | 3 | 348 | 12 | 418 | 3.98e-17 | 83.6 |
MS.gene92392.t1 | AT5G11320 | 23.394 | 218 | 138 | 5 | 6 | 223 | 19 | 207 | 7.37e-15 | 75.9 |
MS.gene92392.t1 | AT5G11320 | 23.394 | 218 | 138 | 5 | 6 | 223 | 19 | 207 | 1.82e-14 | 75.1 |
MS.gene92392.t1 | AT4G32540 | 25.203 | 246 | 152 | 8 | 6 | 248 | 23 | 239 | 1.14e-13 | 72.8 |
MS.gene92392.t1 | AT4G32540 | 25.203 | 246 | 152 | 8 | 6 | 248 | 23 | 239 | 1.14e-13 | 72.8 |
MS.gene92392.t1 | AT4G13260 | 23.923 | 209 | 132 | 6 | 6 | 212 | 30 | 213 | 3.15e-13 | 70.5 |
MS.gene92392.t1 | AT4G13260 | 23.923 | 209 | 132 | 6 | 6 | 212 | 30 | 213 | 7.86e-13 | 70.1 |
MS.gene92392.t1 | AT5G25620 | 22.727 | 220 | 143 | 5 | 6 | 223 | 34 | 228 | 5.64e-12 | 67.8 |
MS.gene92392.t1 | AT5G25620 | 22.273 | 220 | 144 | 4 | 6 | 223 | 34 | 228 | 6.23e-12 | 67.4 |
Find 120 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGTTTGTATTAACCTTAT+AGG | 0.183252 | 8.4:+60375619 | None:intergenic |
TATCAATCCATGGAGGAAAA+TGG | 0.199770 | 8.4:-60375397 | MS.gene92392:CDS |
TTACTGTTCCATTTGTTTCT+AGG | 0.201456 | 8.4:+60375726 | None:intergenic |
GAGGATCAGAGTCTGATTTA+TGG | 0.233873 | 8.4:+60378665 | None:intergenic |
TTTCATTGGTTTAACCTATA+AGG | 0.238314 | 8.4:-60375633 | MS.gene92392:intron |
CCGAGACTTGCTTTGGTTCC+TGG | 0.252034 | 8.4:-60378307 | MS.gene92392:CDS |
ATGAATGGGATGATAATTAT+TGG | 0.261638 | 8.4:-60374899 | MS.gene92392:CDS |
CGGTGATCCAAGAACGTTTC+CGG | 0.270104 | 8.4:-60378527 | MS.gene92392:CDS |
TCATGACCCGGAAACGTTCT+TGG | 0.312023 | 8.4:+60378520 | None:intergenic |
CTACCCTTCAAATCTGGTTT+CGG | 0.333497 | 8.4:+60376100 | None:intergenic |
AACTTCCTACCCTTCAAATC+TGG | 0.337087 | 8.4:+60376094 | None:intergenic |
CTGGTTGGGTCTATGCTTAG+AGG | 0.342999 | 8.4:+60378646 | None:intergenic |
AGGATCAGAGTCTGATTTAT+GGG | 0.356943 | 8.4:+60378666 | None:intergenic |
GGCTGCCTCCATTGGAAGAT+TGG | 0.357111 | 8.4:-60374983 | MS.gene92392:CDS |
CACCACCTCCGTTTCAAATC+GGG | 0.359835 | 8.4:+60378441 | None:intergenic |
CAATATATGTTTCCATACTT+TGG | 0.367814 | 8.4:-60376059 | MS.gene92392:intron |
TTACCCTGTACAGTGAATTA+TGG | 0.368004 | 8.4:+60375892 | None:intergenic |
CTGTGAACTGTTTCTCTGGT+TGG | 0.381244 | 8.4:+60378631 | None:intergenic |
TCACCACCTCCGTTTCAAAT+CGG | 0.383633 | 8.4:+60378440 | None:intergenic |
GCACCATGGCTCTCTTTCAT+TGG | 0.386501 | 8.4:-60375647 | MS.gene92392:CDS |
GAAGCGGTTATTGTGTGTTC+AGG | 0.389205 | 8.4:-60378343 | MS.gene92392:CDS |
TTCATCATCTCTTCTTCATC+GGG | 0.398953 | 8.4:+60375436 | None:intergenic |
TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8.4:+60378632 | None:intergenic |
TGTGGAACCGAGACTTGCTT+TGG | 0.402751 | 8.4:-60378314 | MS.gene92392:CDS |
CAATCTTCCAAGACATATCA+TGG | 0.411970 | 8.4:-60378584 | MS.gene92392:CDS |
ATCAATCCATGGAGGAAAAT+GGG | 0.434145 | 8.4:-60375396 | MS.gene92392:CDS |
GCCTTCTTGCTGTAGCTCCT+TGG | 0.434476 | 8.4:+60378744 | None:intergenic |
AGCGAATGAGTTTGACGCTT+GGG | 0.436767 | 8.4:+60375370 | None:intergenic |
GGTGATCCAAGAACGTTTCC+GGG | 0.437865 | 8.4:-60378526 | MS.gene92392:CDS |
ACTGCTGTGAACTGTTTCTC+TGG | 0.438925 | 8.4:+60378627 | None:intergenic |
ACAGATTGGGCTGCCTCCAT+TGG | 0.441401 | 8.4:-60374991 | MS.gene92392:CDS |
ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8.4:-60375956 | MS.gene92392:CDS |
AGAGGAAAGGAGGGAAGGAG+TGG | 0.442535 | 8.4:-60378411 | MS.gene92392:CDS |
TGGATCACCGGATTCTCGCT+TGG | 0.443511 | 8.4:+60378540 | None:intergenic |
CGGATTCTCGCTTGGACAAA+GGG | 0.444441 | 8.4:+60378548 | None:intergenic |
ATTCCTTTCCTAGAAACAAA+TGG | 0.445885 | 8.4:-60375734 | MS.gene92392:CDS |
CCTTTGTCCAAGCGAGAATC+CGG | 0.450017 | 8.4:-60378547 | MS.gene92392:CDS |
CCTGGTATTGAAAACTTTCG+TGG | 0.451982 | 8.4:-60378289 | MS.gene92392:CDS |
ACCTGGTCTTTGAAAGAATG+AGG | 0.454799 | 8.4:+60378235 | None:intergenic |
GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8.4:-60375935 | MS.gene92392:CDS |
TTGGAGGGACAATATGTTGA+TGG | 0.458426 | 8.4:-60374964 | MS.gene92392:CDS |
CATTGGCTAGTGGAACAGAT+TGG | 0.461510 | 8.4:-60375005 | MS.gene92392:CDS |
CATGATATGTCTTGGAAGAT+TGG | 0.466055 | 8.4:+60378585 | None:intergenic |
GGAGTGGGTGGTTGAGTCAA+GGG | 0.467215 | 8.4:-60378395 | MS.gene92392:CDS |
GTTCCATTTGTTTCTAGGAA+AGG | 0.468015 | 8.4:+60375731 | None:intergenic |
TCCTCATTCTTTCAAAGACC+AGG | 0.469778 | 8.4:-60378236 | MS.gene92392:intron |
CTCCGGTATGGTTGCCGCCA+AGG | 0.471770 | 8.4:-60378761 | MS.gene92392:CDS |
CCCAACACGATTATCTTCAA+TGG | 0.472659 | 8.4:+60375703 | None:intergenic |
GTGATCGGCGCCGGAGTCTC+CGG | 0.474098 | 8.4:-60378778 | MS.gene92392:CDS |
TTTCATCATCTCTTCTTCAT+CGG | 0.474139 | 8.4:+60375435 | None:intergenic |
CCGGATTCTCGCTTGGACAA+AGG | 0.477123 | 8.4:+60378547 | None:intergenic |
TGAATGGGATGATAATTATT+GGG | 0.478067 | 8.4:-60374898 | MS.gene92392:CDS |
AGGAGTGGGTGGTTGAGTCA+AGG | 0.479745 | 8.4:-60378396 | MS.gene92392:CDS |
AAGACCGAAACCAGATTTGA+AGG | 0.481017 | 8.4:-60376104 | MS.gene92392:CDS |
TGATTTATGGGTGTATATCC+AGG | 0.485907 | 8.4:+60378678 | None:intergenic |
TGAAATGTTTAGAGATGAAT+GGG | 0.486215 | 8.4:-60374913 | MS.gene92392:CDS |
ATTGGCTAGTGGAACAGATT+GGG | 0.486382 | 8.4:-60375004 | MS.gene92392:CDS |
GAGGAAAGGAGGGAAGGAGT+GGG | 0.487432 | 8.4:-60378410 | MS.gene92392:CDS |
TGAAAGTTGAGAGGAAAGGA+GGG | 0.491312 | 8.4:-60378420 | MS.gene92392:CDS |
AAGAACCCCATGATATGTCT+TGG | 0.495350 | 8.4:+60378577 | None:intergenic |
GCTGGTGAGTTTGGGATACA+CGG | 0.497630 | 8.4:-60378469 | MS.gene92392:CDS |
GAAAGGAGGGAAGGAGTGGG+TGG | 0.498908 | 8.4:-60378407 | MS.gene92392:CDS |
CTCCTTGGCGGCAACCATAC+CGG | 0.502506 | 8.4:+60378759 | None:intergenic |
TTCTTGCTGTAGCTCCTTGG+CGG | 0.508210 | 8.4:+60378747 | None:intergenic |
ATGAAATGTTTAGAGATGAA+TGG | 0.514327 | 8.4:-60374914 | MS.gene92392:CDS |
GTGAAAGTTGAGAGGAAAGG+AGG | 0.518575 | 8.4:-60378421 | MS.gene92392:CDS |
CGGGTTGACCCGATTTGAAA+CGG | 0.522315 | 8.4:-60378449 | MS.gene92392:CDS |
TACAAGCCAAGTGGATTGCT+AGG | 0.525933 | 8.4:-60375483 | MS.gene92392:CDS |
AGTTGAGAGGAAAGGAGGGA+AGG | 0.527409 | 8.4:-60378416 | MS.gene92392:CDS |
ATGGTTAAAGTTGCAGTGAT+CGG | 0.527688 | 8.4:-60378793 | MS.gene92392:CDS |
TGCCTCCATTGGAAGATTGG+AGG | 0.528808 | 8.4:-60374980 | MS.gene92392:CDS |
ACAACCGCGTCGGAGGAACC+TGG | 0.530565 | 8.4:-60378696 | MS.gene92392:CDS |
TGGGTGGTTGAGTCAAGGGG+TGG | 0.539244 | 8.4:-60378391 | MS.gene92392:CDS |
ACCATTGAAGATAATCGTGT+TGG | 0.540422 | 8.4:-60375704 | MS.gene92392:CDS |
CGGAAACGTTCTTGGATCAC+CGG | 0.540881 | 8.4:+60378528 | None:intergenic |
CCATTGAAGATAATCGTGTT+GGG | 0.541675 | 8.4:-60375703 | MS.gene92392:CDS |
TAAAGATTTCTATCAATCCA+TGG | 0.542834 | 8.4:-60375407 | MS.gene92392:CDS |
GAGAGCCATGGTGCTAGTGA+AGG | 0.545801 | 8.4:+60375656 | None:intergenic |
GGCAACCATACCGGAGACTC+CGG | 0.546270 | 8.4:+60378768 | None:intergenic |
CGAAGCACTTCTTCATGACC+CGG | 0.562385 | 8.4:+60378508 | None:intergenic |
CGGCGCCGGAGTCTCCGGTA+TGG | 0.563529 | 8.4:-60378773 | MS.gene92392:CDS |
ACAAGCCAAGTGGATTGCTA+GGG | 0.564142 | 8.4:-60375482 | MS.gene92392:CDS |
AGATATTGCAAGACTAGCAA+AGG | 0.564596 | 8.4:-60376143 | MS.gene92392:CDS |
AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.4:-60378787 | MS.gene92392:CDS |
GCCTCCATTGGAAGATTGGA+GGG | 0.571840 | 8.4:-60374979 | MS.gene92392:CDS |
GAGAAGAACAACCGCGTCGG+AGG | 0.573075 | 8.4:-60378703 | MS.gene92392:CDS |
GACCCGATTTGAAACGGAGG+TGG | 0.573131 | 8.4:-60378443 | MS.gene92392:CDS |
TTCCTCCTTCACTAGCACCA+TGG | 0.574851 | 8.4:-60375661 | MS.gene92392:CDS |
AGTAGAGAATCCATCTTCAA+AGG | 0.575571 | 8.4:+60375925 | None:intergenic |
GCCAAGGAGCTACAGCAAGA+AGG | 0.578883 | 8.4:-60378745 | MS.gene92392:CDS |
AGCCATGGTGCTAGTGAAGG+AGG | 0.579202 | 8.4:+60375659 | None:intergenic |
ATAAGCATACACACTTGCAA+TGG | 0.579533 | 8.4:+60375343 | None:intergenic |
AAGCGAATGAGTTTGACGCT+TGG | 0.580224 | 8.4:+60375369 | None:intergenic |
GATGCCATAATTCACTGTAC+AGG | 0.584145 | 8.4:-60375896 | MS.gene92392:CDS |
GTGGTGAAAGTTGAGAGGAA+AGG | 0.596110 | 8.4:-60378424 | MS.gene92392:CDS |
CGGAGGTGGTGAAAGTTGAG+AGG | 0.596521 | 8.4:-60378429 | MS.gene92392:CDS |
AATCTTCCAAGACATATCAT+GGG | 0.597490 | 8.4:-60378583 | MS.gene92392:CDS |
GAGTGGGTGGTTGAGTCAAG+GGG | 0.599919 | 8.4:-60378394 | MS.gene92392:CDS |
CCAGGAACCAAAGCAAGTCT+CGG | 0.606520 | 8.4:+60378307 | None:intergenic |
ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8.4:-60375951 | MS.gene92392:CDS |
ATGCCATAATTCACTGTACA+GGG | 0.609312 | 8.4:-60375895 | MS.gene92392:intron |
CGAAACCAGATTTGAAGGGT+AGG | 0.609593 | 8.4:-60376099 | MS.gene92392:CDS |
TTGTCCCTCCAATCTTCCAA+TGG | 0.611794 | 8.4:+60374975 | None:intergenic |
CTGGTGAGTTTGGGATACAC+GGG | 0.612264 | 8.4:-60378468 | MS.gene92392:CDS |
GTCAGGGTGACTACAAACAT+TGG | 0.621125 | 8.4:-60375022 | MS.gene92392:intron |
GAGTCAAGAAGTGTTTGAAG+CGG | 0.628510 | 8.4:-60378359 | MS.gene92392:CDS |
TGACTACAAACATTGGCTAG+TGG | 0.629841 | 8.4:-60375015 | MS.gene92392:CDS |
TCCCTCCAATCTTCCAATGG+AGG | 0.630473 | 8.4:+60374978 | None:intergenic |
AGACCGAAACCAGATTTGAA+GGG | 0.637200 | 8.4:-60376103 | MS.gene92392:CDS |
TGATTGAGTTACAAGCCAAG+TGG | 0.640201 | 8.4:-60375492 | MS.gene92392:CDS |
TTGTTTCTAGGAAAGGAATG+TGG | 0.641337 | 8.4:+60375738 | None:intergenic |
TAAAACCCTAGCAATCCACT+TGG | 0.647424 | 8.4:+60375477 | None:intergenic |
ATATCCAGGTTCCTCCGACG+CGG | 0.654542 | 8.4:+60378692 | None:intergenic |
TTTGAGAAGAACAACCGCGT+CGG | 0.657447 | 8.4:-60378706 | MS.gene92392:CDS |
AAACCAATGAAAGAGAGCCA+TGG | 0.673851 | 8.4:+60375644 | None:intergenic |
AGATGGATTCTCTACTCATG+CGG | 0.676981 | 8.4:-60375918 | MS.gene92392:CDS |
ATCTTCCAAGACATATCATG+GGG | 0.677371 | 8.4:-60378582 | MS.gene92392:CDS |
TGGGATGCTATCATACAGAG+TGG | 0.690605 | 8.4:-60374879 | MS.gene92392:CDS |
GTTGACCCGATTTGAAACGG+AGG | 0.721505 | 8.4:-60378446 | MS.gene92392:CDS |
AGATTTCTATCAATCCATGG+AGG | 0.738259 | 8.4:-60375404 | MS.gene92392:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATTCAAATATTACTT+TGG | - | chr8.4:60376577-60376596 | MS.gene92392:intron | 10.0% |
!! | AAATTAATAATAAATTATCG+TGG | - | chr8.4:60378124-60378143 | MS.gene92392:intron | 10.0% |
!! | AATAATTCAAATATTACTTT+GGG | - | chr8.4:60376578-60376597 | MS.gene92392:intron | 10.0% |
!! | ATATATATAATTAATGATTG+AGG | - | chr8.4:60377864-60377883 | MS.gene92392:intron | 10.0% |
!! | ATTAATAGTGTTTATATAAT+GGG | + | chr8.4:60376991-60377010 | None:intergenic | 10.0% |
!!! | AAAAATATTTTTTACTTTGA+AGG | - | chr8.4:60376279-60376298 | MS.gene92392:intron | 10.0% |
!!! | AAAATATTTTTTACTTTGAA+GGG | - | chr8.4:60376280-60376299 | MS.gene92392:intron | 10.0% |
!!! | ATATGCAATATAATATATTT+TGG | + | chr8.4:60376752-60376771 | None:intergenic | 10.0% |
!!! | TGAAAAAGAATTTTTATTTA+CGG | - | chr8.4:60376189-60376208 | MS.gene92392:CDS | 10.0% |
!! | AAAAATAAATTACTTTGTGT+TGG | + | chr8.4:60377128-60377147 | None:intergenic | 15.0% |
!! | AATTAATATATGAGAAACTT+TGG | - | chr8.4:60376550-60376569 | MS.gene92392:intron | 15.0% |
!! | AGAAAAATATGTGAAAATTA+AGG | + | chr8.4:60377816-60377835 | None:intergenic | 15.0% |
!! | ATAAATCATAATAATATGAC+AGG | - | chr8.4:60377890-60377909 | MS.gene92392:intron | 15.0% |
!! | ATTAATATATGAGAAACTTT+GGG | - | chr8.4:60376551-60376570 | MS.gene92392:intron | 15.0% |
!! | CATTAATAGTGTTTATATAA+TGG | + | chr8.4:60376992-60377011 | None:intergenic | 15.0% |
!! | GAGATAATATAATTAGTTAA+TGG | - | chr8.4:60375959-60375978 | MS.gene92392:CDS | 15.0% |
!! | TTAAGTAGAAATTATCAATT+AGG | + | chr8.4:60377446-60377465 | None:intergenic | 15.0% |
!! | TTGAAGGATTATTTATATAT+TGG | + | chr8.4:60375723-60375742 | None:intergenic | 15.0% |
!!! | AAAATATTTTAGGAAAACTT+AGG | - | chr8.4:60376817-60376836 | MS.gene92392:intron | 15.0% |
!!! | AAATATTTTAGGAAAACTTA+GGG | - | chr8.4:60376818-60376837 | MS.gene92392:intron | 15.0% |
!!! | ACATAATCTTTTTTTTTTTG+TGG | + | chr8.4:60375648-60375667 | None:intergenic | 15.0% |
!!! | ACATTTTTTACATTTTCTTT+GGG | - | chr8.4:60377176-60377195 | MS.gene92392:intron | 15.0% |
!!! | CAGAAAACTATTTTAAATTA+AGG | + | chr8.4:60376061-60376080 | None:intergenic | 15.0% |
!!! | TAAGTTTTCCTAAAATATTT+TGG | + | chr8.4:60376818-60376837 | None:intergenic | 15.0% |
!!! | TACATTTTTTACATTTTCTT+TGG | - | chr8.4:60377175-60377194 | MS.gene92392:intron | 15.0% |
!! | AACGTAATGAATAAAAAAGT+TGG | + | chr8.4:60375688-60375707 | None:intergenic | 20.0% |
!! | ACAAATTTGACAATTGTAAA+GGG | - | chr8.4:60378562-60378581 | MS.gene92392:CDS | 20.0% |
!! | ACAATTGTCAAATTTGTAAT+TGG | + | chr8.4:60378559-60378578 | None:intergenic | 20.0% |
!! | ATTAAATGTGTATATGAAGA+TGG | - | chr8.4:60377703-60377722 | MS.gene92392:intron | 20.0% |
!! | TACAAATTTGACAATTGTAA+AGG | - | chr8.4:60378561-60378580 | MS.gene92392:CDS | 20.0% |
!! | TATTATTCTTGTATGTGTTA+CGG | + | chr8.4:60376110-60376129 | None:intergenic | 20.0% |
!! | TTCAGATTACTTGATTAAAT+AGG | - | chr8.4:60375477-60375496 | MS.gene92392:CDS | 20.0% |
!!! | AAATTGCACATTTGAAATTA+AGG | - | chr8.4:60375780-60375799 | MS.gene92392:intron | 20.0% |
!!! | AAATTTTACATACCAAAGTA+TGG | + | chr8.4:60377615-60377634 | None:intergenic | 20.0% |
!!! | AACATTCATGACTAATTTTA+AGG | + | chr8.4:60375593-60375612 | None:intergenic | 20.0% |
!!! | AATTGCACATTTGAAATTAA+GGG | - | chr8.4:60375781-60375800 | MS.gene92392:intron | 20.0% |
!!! | AGATTTTTAGAAGTCTTTTT+CGG | - | chr8.4:60376480-60376499 | MS.gene92392:intron | 20.0% |
!!! | ATAGGCATTCTTAATTTTAA+TGG | - | chr8.4:60378506-60378525 | MS.gene92392:CDS | 20.0% |
!!! | ATTCTTTTTCAAATTGACTT+TGG | + | chr8.4:60376180-60376199 | None:intergenic | 20.0% |
!!! | ATTGATAATTTCTACTTAAC+AGG | - | chr8.4:60377447-60377466 | MS.gene92392:intron | 20.0% |
!!! | ATTTTCAAAATTACTTTGTC+AGG | - | chr8.4:60378620-60378639 | MS.gene92392:CDS | 20.0% |
!!! | ATTTTTTACATTTTCTTTGG+GGG | - | chr8.4:60377178-60377197 | MS.gene92392:intron | 20.0% |
!!! | CATTTTTTACATTTTCTTTG+GGG | - | chr8.4:60377177-60377196 | MS.gene92392:intron | 20.0% |
!!! | TTGGTATGTAAAATTTGTTA+TGG | - | chr8.4:60377619-60377638 | MS.gene92392:intron | 20.0% |
!!! | TTTTCAAAATTACTTTGTCA+GGG | - | chr8.4:60378621-60378640 | MS.gene92392:CDS | 20.0% |
! | AAATTAGTCATGAATGTTCA+AGG | - | chr8.4:60375595-60375614 | MS.gene92392:intron | 25.0% |
! | AATAATCCTTCAAACCAATT+TGG | - | chr8.4:60375730-60375749 | MS.gene92392:CDS | 25.0% |
! | AATGGAAATAAAAACATCCA+AGG | - | chr8.4:60375977-60375996 | MS.gene92392:intron | 25.0% |
! | ACAAAACATCTTAAAAAGAG+CGG | + | chr8.4:60376238-60376257 | None:intergenic | 25.0% |
! | AGAGACATTATATCTAGAAA+TGG | - | chr8.4:60376350-60376369 | MS.gene92392:intron | 25.0% |
! | ATCAATTAGGAATTTAGAAG+AGG | + | chr8.4:60377841-60377860 | None:intergenic | 25.0% |
! | ATGAAATGTTTAGAGATGAA+TGG | - | chr8.4:60378745-60378764 | MS.gene92392:CDS | 25.0% |
! | ATGAATGGGATGATAATTAT+TGG | - | chr8.4:60378760-60378779 | MS.gene92392:CDS | 25.0% |
! | ATGGAAATAAAAACATCCAA+GGG | - | chr8.4:60375978-60375997 | MS.gene92392:intron | 25.0% |
! | CAAAATGAATATGATTTACC+TGG | + | chr8.4:60375444-60375463 | None:intergenic | 25.0% |
! | CAATATATGTTTCCATACTT+TGG | - | chr8.4:60377600-60377619 | MS.gene92392:intron | 25.0% |
! | CTTGATTAAATAGGCTAAAA+CGG | - | chr8.4:60375486-60375505 | MS.gene92392:CDS | 25.0% |
! | GAAAGTTAAAAGACTAAACA+CGG | + | chr8.4:60377089-60377108 | None:intergenic | 25.0% |
! | GAAGTTTGTATTAACCTTAT+AGG | + | chr8.4:60378043-60378062 | None:intergenic | 25.0% |
! | GATTTACTAAAGTGGTTTAT+GGG | - | chr8.4:60377402-60377421 | MS.gene92392:intron | 25.0% |
! | GTAACACATACAAGAATAAT+AGG | - | chr8.4:60376109-60376128 | MS.gene92392:CDS | 25.0% |
! | TAAACCACTTTAGTAAATCA+AGG | + | chr8.4:60377401-60377420 | None:intergenic | 25.0% |
! | TAAAGATTTCTATCAATCCA+TGG | - | chr8.4:60378252-60378271 | MS.gene92392:CDS | 25.0% |
! | TATATTGTATAGAACTAGTG+TGG | + | chr8.4:60377061-60377080 | None:intergenic | 25.0% |
! | TGAAATGTTTAGAGATGAAT+GGG | - | chr8.4:60378746-60378765 | MS.gene92392:CDS | 25.0% |
! | TGAATACCAAAGTAAATTTC+AGG | - | chr8.4:60376719-60376738 | MS.gene92392:intron | 25.0% |
! | TGAATGGGATGATAATTATT+GGG | - | chr8.4:60378761-60378780 | MS.gene92392:CDS | 25.0% |
! | TGATTTACTAAAGTGGTTTA+TGG | - | chr8.4:60377401-60377420 | MS.gene92392:intron | 25.0% |
! | TGGAGTAGATTGAAAAAAAA+TGG | + | chr8.4:60377041-60377060 | None:intergenic | 25.0% |
! | TTACTGGTAAACAAAAATCA+AGG | + | chr8.4:60377328-60377347 | None:intergenic | 25.0% |
!! | AAAGATTGTGCAAATTTTAC+TGG | + | chr8.4:60377344-60377363 | None:intergenic | 25.0% |
!! | AATAGTGTTTATATAATGGG+AGG | + | chr8.4:60376988-60377007 | None:intergenic | 25.0% |
!! | CATACTTTTGTATATGTGAA+AGG | + | chr8.4:60375570-60375589 | None:intergenic | 25.0% |
!! | GTACTCAACATGATATATTT+TGG | + | chr8.4:60376684-60376703 | None:intergenic | 25.0% |
!! | TTTCTTCTTTTCTTCCTTTT+TGG | + | chr8.4:60376459-60376478 | None:intergenic | 25.0% |
!!! | AACAGGTTGTGATTTTAATT+GGG | - | chr8.4:60377464-60377483 | MS.gene92392:intron | 25.0% |
!!! | ACAAAAATCAAGGTCTTATT+TGG | + | chr8.4:60377318-60377337 | None:intergenic | 25.0% |
!!! | ACACTAGTTCTATACAATAT+AGG | - | chr8.4:60377060-60377079 | MS.gene92392:intron | 25.0% |
!!! | TAACAGGTTGTGATTTTAAT+TGG | - | chr8.4:60377463-60377482 | MS.gene92392:intron | 25.0% |
!!! | TCTTAATTTTAATGGAGCAA+TGG | - | chr8.4:60378514-60378533 | MS.gene92392:CDS | 25.0% |
!!! | TTATTTTTCTCGTTACTTCA+TGG | - | chr8.4:60378335-60378354 | MS.gene92392:CDS | 25.0% |
!!! | TTTCATTGGTTTAACCTATA+AGG | - | chr8.4:60378026-60378045 | MS.gene92392:intron | 25.0% |
!!! | TTTTTTACATTTTCTTTGGG+GGG | - | chr8.4:60377179-60377198 | MS.gene92392:intron | 25.0% |
AAGACCTTGATTTACTAAAG+TGG | - | chr8.4:60377394-60377413 | MS.gene92392:intron | 30.0% | |
AATAATAAATTATCGTGGCC+AGG | - | chr8.4:60378129-60378148 | MS.gene92392:intron | 30.0% | |
AATCTTCCAAGACATATCAT+GGG | - | chr8.4:60375076-60375095 | MS.gene92392:intron | 30.0% | |
ACTTGACCTGAAATTTACTT+TGG | + | chr8.4:60376728-60376747 | None:intergenic | 30.0% | |
AGTACATAATTATGTGAACG+AGG | + | chr8.4:60376950-60376969 | None:intergenic | 30.0% | |
ATGACATGTCTTGTCTTTAT+TGG | + | chr8.4:60375756-60375775 | None:intergenic | 30.0% | |
ATTCCTTTCCTAGAAACAAA+TGG | - | chr8.4:60377925-60377944 | MS.gene92392:intron | 30.0% | |
CGTAAGAACACTCTTAATTA+AGG | - | chr8.4:60376401-60376420 | MS.gene92392:intron | 30.0% | |
TGTCTCTTCGAAATTAAGAA+TGG | + | chr8.4:60376337-60376356 | None:intergenic | 30.0% | |
TGTTTGTCATCTATCTAATG+TGG | - | chr8.4:60377010-60377029 | MS.gene92392:intron | 30.0% | |
TTTATGGGATGTTCAATCTT+TGG | - | chr8.4:60377417-60377436 | MS.gene92392:intron | 30.0% | |
TTTCATCATCTCTTCTTCAT+CGG | + | chr8.4:60378227-60378246 | None:intergenic | 30.0% | |
TTTGACAATTGTAAAGGGTA+AGG | - | chr8.4:60378567-60378586 | MS.gene92392:CDS | 30.0% | |
! | GCTGTGTTCCAAAATATTTT+AGG | - | chr8.4:60376807-60376826 | MS.gene92392:intron | 30.0% |
! | TTACTGTTCCATTTGTTTCT+AGG | + | chr8.4:60377936-60377955 | None:intergenic | 30.0% |
!! | TACGTTGTTTTCAAAACCAA+TGG | + | chr8.4:60375843-60375862 | None:intergenic | 30.0% |
ACAATTGTAAAGGGTAAGGT+AGG | - | chr8.4:60378571-60378590 | MS.gene92392:CDS | 35.0% | |
ACCATTGAAGATAATCGTGT+TGG | - | chr8.4:60377955-60377974 | MS.gene92392:intron | 35.0% | |
AGATATTGCAAGACTAGCAA+AGG | - | chr8.4:60377516-60377535 | MS.gene92392:intron | 35.0% | |
AGATTTCTATCAATCCATGG+AGG | - | chr8.4:60378255-60378274 | MS.gene92392:CDS | 35.0% | |
AGGATCAGAGTCTGATTTAT+GGG | + | chr8.4:60374996-60375015 | None:intergenic | 35.0% | |
AGTAGAGAATCCATCTTCAA+AGG | + | chr8.4:60377737-60377756 | None:intergenic | 35.0% | |
ATAAGCATACACACTTGCAA+TGG | + | chr8.4:60378319-60378338 | None:intergenic | 35.0% | |
ATCAATCCATGGAGGAAAAT+GGG | - | chr8.4:60378263-60378282 | MS.gene92392:CDS | 35.0% | |
ATCTTCCAAGACATATCATG+GGG | - | chr8.4:60375077-60375096 | MS.gene92392:intron | 35.0% | |
ATGCCATAATTCACTGTACA+GGG | - | chr8.4:60377764-60377783 | MS.gene92392:intron | 35.0% | |
ATGGTAGAGGCGATAAAAAT+AGG | + | chr8.4:60375824-60375843 | None:intergenic | 35.0% | |
ATGGTTAAAGTTGCAGTGAT+CGG | - | chr8.4:60374866-60374885 | MS.gene92392:CDS | 35.0% | |
ATGTGTATATGAAGATGGCT+TGG | - | chr8.4:60377708-60377727 | MS.gene92392:intron | 35.0% | |
CAATCTTCCAAGACATATCA+TGG | - | chr8.4:60375075-60375094 | MS.gene92392:intron | 35.0% | |
CATGATATGTCTTGGAAGAT+TGG | + | chr8.4:60375077-60375096 | None:intergenic | 35.0% | |
CCATTGAAGATAATCGTGTT+GGG | - | chr8.4:60377956-60377975 | MS.gene92392:intron | 35.0% | |
CGGAAAACATGTATGCAAAT+AGG | - | chr8.4:60375506-60375525 | MS.gene92392:CDS | 35.0% | |
CTTGTCTTTATTGGCCAAAT+TGG | + | chr8.4:60375747-60375766 | None:intergenic | 35.0% | |
GAAATAAAAACATCCAAGGG+TGG | - | chr8.4:60375981-60376000 | MS.gene92392:intron | 35.0% | |
GGAAAAACGTGTTTGTATAG+TGG | + | chr8.4:60377982-60378001 | None:intergenic | 35.0% | |
TATCAATCCATGGAGGAAAA+TGG | - | chr8.4:60378262-60378281 | MS.gene92392:CDS | 35.0% | |
TGATTTATGGGTGTATATCC+AGG | + | chr8.4:60374984-60375003 | None:intergenic | 35.0% | |
TTACCCTGTACAGTGAATTA+TGG | + | chr8.4:60377770-60377789 | None:intergenic | 35.0% | |
TTCATCATCTCTTCTTCATC+GGG | + | chr8.4:60378226-60378245 | None:intergenic | 35.0% | |
! | ATTTTTATCGCCTCTACCAT+TGG | - | chr8.4:60375824-60375843 | MS.gene92392:intron | 35.0% |
! | GTTTTCAAAACCAATGGTAG+AGG | + | chr8.4:60375837-60375856 | None:intergenic | 35.0% |
!! | GTTCCATTTGTTTCTAGGAA+AGG | + | chr8.4:60377931-60377950 | None:intergenic | 35.0% |
!! | TATTGGCCAAATTGGTTTGA+AGG | + | chr8.4:60375739-60375758 | None:intergenic | 35.0% |
!! | TTGTTTCTAGGAAAGGAATG+TGG | + | chr8.4:60377924-60377943 | None:intergenic | 35.0% |
!!! | CTTTTTTGTCTCGTAAGTGT+AGG | + | chr8.4:60377377-60377396 | None:intergenic | 35.0% |
!!! | GTTGTGATTTTAATTGGGCT+AGG | - | chr8.4:60377469-60377488 | MS.gene92392:intron | 35.0% |
!!! | TCTTCCTTTTTGGTTTGTGT+TGG | + | chr8.4:60376449-60376468 | None:intergenic | 35.0% |
!!! | TGAAGAAGTGCTTCGTTTTT+TGG | - | chr8.4:60375159-60375178 | MS.gene92392:intron | 35.0% |
AAACCAATGAAAGAGAGCCA+TGG | + | chr8.4:60378018-60378037 | None:intergenic | 40.0% | |
AACTTCCTACCCTTCAAATC+TGG | + | chr8.4:60377568-60377587 | None:intergenic | 40.0% | |
AAGAACCCCATGATATGTCT+TGG | + | chr8.4:60375085-60375104 | None:intergenic | 40.0% | |
AAGACCGAAACCAGATTTGA+AGG | - | chr8.4:60377555-60377574 | MS.gene92392:intron | 40.0% | |
ACATCTTAAAAAGAGCGGCT+TGG | + | chr8.4:60376233-60376252 | None:intergenic | 40.0% | |
AGACCGAAACCAGATTTGAA+GGG | - | chr8.4:60377556-60377575 | MS.gene92392:intron | 40.0% | |
ATTGGCTAGTGGAACAGATT+GGG | - | chr8.4:60378655-60378674 | MS.gene92392:CDS | 40.0% | |
CCCAACACGATTATCTTCAA+TGG | + | chr8.4:60377959-60377978 | None:intergenic | 40.0% | |
CCTAACACGTTGTATGAAAG+CGG | - | chr8.4:60377222-60377241 | MS.gene92392:intron | 40.0% | |
CGCTTTCATACAACGTGTTA+GGG | + | chr8.4:60377224-60377243 | None:intergenic | 40.0% | |
GAGGATCAGAGTCTGATTTA+TGG | + | chr8.4:60374997-60375016 | None:intergenic | 40.0% | |
GATGCCATAATTCACTGTAC+AGG | - | chr8.4:60377763-60377782 | MS.gene92392:intron | 40.0% | |
TAAAACCCTAGCAATCCACT+TGG | + | chr8.4:60378185-60378204 | None:intergenic | 40.0% | |
TCACACTGAAAGCAATTTCC+TGG | + | chr8.4:60378150-60378169 | None:intergenic | 40.0% | |
TCCTCATTCTTTCAAAGACC+AGG | - | chr8.4:60375423-60375442 | MS.gene92392:CDS | 40.0% | |
TGAAAGTTGAGAGGAAAGGA+GGG | - | chr8.4:60375239-60375258 | MS.gene92392:intron | 40.0% | |
TGATTGAGTTACAAGCCAAG+TGG | - | chr8.4:60378167-60378186 | MS.gene92392:intron | 40.0% | |
TTGGAGGGACAATATGTTGA+TGG | - | chr8.4:60378695-60378714 | MS.gene92392:CDS | 40.0% | |
! | AATGGGAGGTGTACTTCTAA+AGG | + | chr8.4:60376974-60376993 | None:intergenic | 40.0% |
! | ACCTGGTCTTTGAAAGAATG+AGG | + | chr8.4:60375427-60375446 | None:intergenic | 40.0% |
! | AGATGGATTCTCTACTCATG+CGG | - | chr8.4:60377741-60377760 | MS.gene92392:intron | 40.0% |
! | AGGATTTTGCTGGTGAGTTT+GGG | - | chr8.4:60375182-60375201 | MS.gene92392:intron | 40.0% |
! | ATGGGAGGTGTACTTCTAAA+GGG | + | chr8.4:60376973-60376992 | None:intergenic | 40.0% |
! | CCACGAAAGTTTTCAATACC+AGG | + | chr8.4:60375373-60375392 | None:intergenic | 40.0% |
! | CCTGGTATTGAAAACTTTCG+TGG | - | chr8.4:60375370-60375389 | MS.gene92392:CDS | 40.0% |
! | CTACCCTTCAAATCTGGTTT+CGG | + | chr8.4:60377562-60377581 | None:intergenic | 40.0% |
! | TGACTACAAACATTGGCTAG+TGG | - | chr8.4:60378644-60378663 | MS.gene92392:CDS | 40.0% |
! | TGTGAACTGTTTCTCTGGTT+GGG | + | chr8.4:60375030-60375049 | None:intergenic | 40.0% |
!! | GAGTCAAGAAGTGTTTGAAG+CGG | - | chr8.4:60375300-60375319 | MS.gene92392:intron | 40.0% |
!! | TGCTAGGGTTTTATCTGGTA+AGG | - | chr8.4:60378192-60378211 | MS.gene92392:intron | 40.0% |
!! | TGGATTGCTAGGGTTTTATC+TGG | - | chr8.4:60378187-60378206 | MS.gene92392:intron | 40.0% |
!! | TGTGTGTTCAGGTCATTTTG+TGG | - | chr8.4:60375327-60375346 | MS.gene92392:intron | 40.0% |
!! | TTTACATTTTCTTTGGGGGG+TGG | - | chr8.4:60377182-60377201 | MS.gene92392:intron | 40.0% |
!!! | AGAAGTGCTTCGTTTTTTGG+AGG | - | chr8.4:60375162-60375181 | MS.gene92392:intron | 40.0% |
!!! | CGTTTTTTGGAGGATTTTGC+TGG | - | chr8.4:60375172-60375191 | MS.gene92392:intron | 40.0% |
!!! | TAGAAGTCTTTTTCGGTGTG+TGG | - | chr8.4:60376487-60376506 | MS.gene92392:intron | 40.0% |
AAGCGAATGAGTTTGACGCT+TGG | + | chr8.4:60378293-60378312 | None:intergenic | 45.0% | |
AAGCGGTGGAAAGGAAAACA+TGG | - | chr8.4:60375933-60375952 | MS.gene92392:CDS | 45.0% | |
AAGGGTGGTAATAGCTTCGT+GGG | - | chr8.4:60375996-60376015 | MS.gene92392:intron | 45.0% | |
AGCGAATGAGTTTGACGCTT+GGG | + | chr8.4:60378292-60378311 | None:intergenic | 45.0% | |
AGCGGTGGAAAGGAAAACAT+GGG | - | chr8.4:60375934-60375953 | MS.gene92392:CDS | 45.0% | |
CCGCTTTCATACAACGTGTT+AGG | + | chr8.4:60377225-60377244 | None:intergenic | 45.0% | |
CGAAACCAGATTTGAAGGGT+AGG | - | chr8.4:60377560-60377579 | MS.gene92392:intron | 45.0% | |
CTCGCCAACACAAACCAAAA+AGG | - | chr8.4:60376442-60376461 | MS.gene92392:intron | 45.0% | |
GAAGCGGTTATTGTGTGTTC+AGG | - | chr8.4:60375316-60375335 | MS.gene92392:intron | 45.0% | |
GTCAGGGTGACTACAAACAT+TGG | - | chr8.4:60378637-60378656 | MS.gene92392:CDS | 45.0% | |
GTGAAAGTTGAGAGGAAAGG+AGG | - | chr8.4:60375238-60375257 | MS.gene92392:intron | 45.0% | |
GTGGTGAAAGTTGAGAGGAA+AGG | - | chr8.4:60375235-60375254 | MS.gene92392:intron | 45.0% | |
TCACCACCTCCGTTTCAAAT+CGG | + | chr8.4:60375222-60375241 | None:intergenic | 45.0% | |
TCATACAACGTGTTAGGGCT+CGG | + | chr8.4:60377219-60377238 | None:intergenic | 45.0% | |
TCTCAAAAACGACGACGTTG+TGG | + | chr8.4:60374940-60374959 | None:intergenic | 45.0% | |
TGGGATGCTATCATACAGAG+TGG | - | chr8.4:60378780-60378799 | MS.gene92392:CDS | 45.0% | |
TTGTCCCTCCAATCTTCCAA+TGG | + | chr8.4:60378687-60378706 | None:intergenic | 45.0% | |
TTTGAGAAGAACAACCGCGT+CGG | - | chr8.4:60374953-60374972 | MS.gene92392:CDS | 45.0% | |
! | ACTGCTGTGAACTGTTTCTC+TGG | + | chr8.4:60375035-60375054 | None:intergenic | 45.0% |
! | CATTGGCTAGTGGAACAGAT+TGG | - | chr8.4:60378654-60378673 | MS.gene92392:CDS | 45.0% |
! | CTGTGAACTGTTTCTCTGGT+TGG | + | chr8.4:60375031-60375050 | None:intergenic | 45.0% |
! | GAGGATTTTGCTGGTGAGTT+TGG | - | chr8.4:60375181-60375200 | MS.gene92392:intron | 45.0% |
!! | ACAAGCCAAGTGGATTGCTA+GGG | - | chr8.4:60378177-60378196 | MS.gene92392:intron | 45.0% |
!! | TACAAGCCAAGTGGATTGCT+AGG | - | chr8.4:60378176-60378195 | MS.gene92392:intron | 45.0% |
!! | TTAAATTAAAAAAAATCAAT+AGG | - | chr8.4:60378488-60378507 | MS.gene92392:CDS | 5.0% |
!! | TTATATATATAATATCAATT+AGG | + | chr8.4:60377854-60377873 | None:intergenic | 5.0% |
AGTTGAGAGGAAAGGAGGGA+AGG | - | chr8.4:60375243-60375262 | MS.gene92392:intron | 50.0% | |
AGTTTGTGGACATCAAGCGG+TGG | - | chr8.4:60375919-60375938 | MS.gene92392:CDS | 50.0% | |
CAAGGGTGGTAATAGCTTCG+TGG | - | chr8.4:60375995-60376014 | MS.gene92392:intron | 50.0% | |
CACCACCTCCGTTTCAAATC+GGG | + | chr8.4:60375221-60375240 | None:intergenic | 50.0% | |
CACGAAGCTATTACCACCCT+TGG | + | chr8.4:60375997-60376016 | None:intergenic | 50.0% | |
CCAGGAACCAAAGCAAGTCT+CGG | + | chr8.4:60375355-60375374 | None:intergenic | 50.0% | |
CCTTTGTCCAAGCGAGAATC+CGG | - | chr8.4:60375112-60375131 | MS.gene92392:intron | 50.0% | |
CGGAAACGTTCTTGGATCAC+CGG | + | chr8.4:60375134-60375153 | None:intergenic | 50.0% | |
CGGAGTTTGTGGACATCAAG+CGG | - | chr8.4:60375916-60375935 | MS.gene92392:CDS | 50.0% | |
CGGATTCTCGCTTGGACAAA+GGG | + | chr8.4:60375114-60375133 | None:intergenic | 50.0% | |
CGGTAACACTTCATGTCGCT+CGG | + | chr8.4:60376090-60376109 | None:intergenic | 50.0% | |
CGGTGATCCAAGAACGTTTC+CGG | - | chr8.4:60375132-60375151 | MS.gene92392:intron | 50.0% | |
CTGGTTGGGTCTATGCTTAG+AGG | + | chr8.4:60375016-60375035 | None:intergenic | 50.0% | |
CTTCGTGGGTTTCTCATGCA+TGG | - | chr8.4:60376010-60376029 | MS.gene92392:intron | 50.0% | |
GCACCATGGCTCTCTTTCAT+TGG | - | chr8.4:60378012-60378031 | MS.gene92392:intron | 50.0% | |
GCCTCCATTGGAAGATTGGA+GGG | - | chr8.4:60378680-60378699 | MS.gene92392:CDS | 50.0% | |
GCGGTGGAAAGGAAAACATG+GGG | - | chr8.4:60375935-60375954 | MS.gene92392:CDS | 50.0% | |
GGTGATCCAAGAACGTTTCC+GGG | - | chr8.4:60375133-60375152 | MS.gene92392:intron | 50.0% | |
TCATGACCCGGAAACGTTCT+TGG | + | chr8.4:60375142-60375161 | None:intergenic | 50.0% | |
TCCCTCCAATCTTCCAATGG+AGG | + | chr8.4:60378684-60378703 | None:intergenic | 50.0% | |
TGCCTCCATTGGAAGATTGG+AGG | - | chr8.4:60378679-60378698 | MS.gene92392:CDS | 50.0% | |
TTCCTCCTTCACTAGCACCA+TGG | - | chr8.4:60377998-60378017 | MS.gene92392:intron | 50.0% | |
! | CGAAGCACTTCTTCATGACC+CGG | + | chr8.4:60375154-60375173 | None:intergenic | 50.0% |
! | CGGGTTGACCCGATTTGAAA+CGG | - | chr8.4:60375210-60375229 | MS.gene92392:intron | 50.0% |
! | CTGGTGAGTTTGGGATACAC+GGG | - | chr8.4:60375191-60375210 | MS.gene92392:intron | 50.0% |
! | GCTGGTGAGTTTGGGATACA+CGG | - | chr8.4:60375190-60375209 | MS.gene92392:intron | 50.0% |
! | GGCTTGGTTGCCTTTGAAGA+TGG | - | chr8.4:60377724-60377743 | MS.gene92392:intron | 50.0% |
! | GGGTAACCCATTTTCCTCCA+TGG | + | chr8.4:60378272-60378291 | None:intergenic | 50.0% |
! | GTTGACCCGATTTGAAACGG+AGG | - | chr8.4:60375213-60375232 | MS.gene92392:intron | 50.0% |
! | TGTGGAACCGAGACTTGCTT+TGG | - | chr8.4:60375345-60375364 | MS.gene92392:intron | 50.0% |
! | TTCTTGCTGTAGCTCCTTGG+CGG | + | chr8.4:60374915-60374934 | None:intergenic | 50.0% |
!! | TTTCTTTGGGGGGTGGATTG+TGG | - | chr8.4:60377189-60377208 | MS.gene92392:intron | 50.0% |
AAAGTTGCAGTGATCGGCGC+CGG | - | chr8.4:60374872-60374891 | MS.gene92392:CDS | 55.0% | |
AAGCACACGAGCGGAGTTTG+TGG | - | chr8.4:60375905-60375924 | MS.gene92392:CDS | 55.0% | |
ACAGATTGGGCTGCCTCCAT+TGG | - | chr8.4:60378668-60378687 | MS.gene92392:CDS | 55.0% | |
AGAGGAAAGGAGGGAAGGAG+TGG | - | chr8.4:60375248-60375267 | MS.gene92392:intron | 55.0% | |
AGGAGTGGGTGGTTGAGTCA+AGG | - | chr8.4:60375263-60375282 | MS.gene92392:intron | 55.0% | |
ATATCCAGGTTCCTCCGACG+CGG | + | chr8.4:60374970-60374989 | None:intergenic | 55.0% | |
CCGGATTCTCGCTTGGACAA+AGG | + | chr8.4:60375115-60375134 | None:intergenic | 55.0% | |
CGGAGGTGGTGAAAGTTGAG+AGG | - | chr8.4:60375230-60375249 | MS.gene92392:intron | 55.0% | |
GAGGAAAGGAGGGAAGGAGT+GGG | - | chr8.4:60375249-60375268 | MS.gene92392:intron | 55.0% | |
GAGTGGGTGGTTGAGTCAAG+GGG | - | chr8.4:60375265-60375284 | MS.gene92392:intron | 55.0% | |
GCCAAGGAGCTACAGCAAGA+AGG | - | chr8.4:60374914-60374933 | MS.gene92392:CDS | 55.0% | |
GGAGTGGGTGGTTGAGTCAA+GGG | - | chr8.4:60375264-60375283 | MS.gene92392:intron | 55.0% | |
GGCTGCCTCCATTGGAAGAT+TGG | - | chr8.4:60378676-60378695 | MS.gene92392:CDS | 55.0% | |
GTGGACATCAAGCGGTGGAA+AGG | - | chr8.4:60375924-60375943 | MS.gene92392:CDS | 55.0% | |
TGGATCACCGGATTCTCGCT+TGG | + | chr8.4:60375122-60375141 | None:intergenic | 55.0% | |
! | ACGAGACGAAAGCACACGAG+CGG | - | chr8.4:60375896-60375915 | MS.gene92392:CDS | 55.0% |
! | AGCCATGGTGCTAGTGAAGG+AGG | + | chr8.4:60378003-60378022 | None:intergenic | 55.0% |
! | CCGAGACTTGCTTTGGTTCC+TGG | - | chr8.4:60375352-60375371 | MS.gene92392:intron | 55.0% |
! | GACCCGATTTGAAACGGAGG+TGG | - | chr8.4:60375216-60375235 | MS.gene92392:intron | 55.0% |
! | GAGAGCCATGGTGCTAGTGA+AGG | + | chr8.4:60378006-60378025 | None:intergenic | 55.0% |
! | GCCTTCTTGCTGTAGCTCCT+TGG | + | chr8.4:60374918-60374937 | None:intergenic | 55.0% |
CTCCTTGGCGGCAACCATAC+CGG | + | chr8.4:60374903-60374922 | None:intergenic | 60.0% | |
GAAAGGAGGGAAGGAGTGGG+TGG | - | chr8.4:60375252-60375271 | MS.gene92392:intron | 60.0% | |
GAGAAGAACAACCGCGTCGG+AGG | - | chr8.4:60374956-60374975 | MS.gene92392:CDS | 60.0% | |
GGCAACCATACCGGAGACTC+CGG | + | chr8.4:60374894-60374913 | None:intergenic | 60.0% | |
TGGGTGGTTGAGTCAAGGGG+TGG | - | chr8.4:60375268-60375287 | MS.gene92392:intron | 60.0% | |
ACAACCGCGTCGGAGGAACC+TGG | - | chr8.4:60374963-60374982 | MS.gene92392:CDS | 65.0% | |
CTCCGGTATGGTTGCCGCCA+AGG | - | chr8.4:60374898-60374917 | MS.gene92392:CDS | 65.0% | |
! | GTGATCGGCGCCGGAGTCTC+CGG | - | chr8.4:60374881-60374900 | MS.gene92392:CDS | 70.0% |
! | CGGCGCCGGAGTCTCCGGTA+TGG | - | chr8.4:60374886-60374905 | MS.gene92392:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 60374866 | 60378815 | 60374866 | ID=MS.gene92392 |
chr8.4 | mRNA | 60374866 | 60378815 | 60374866 | ID=MS.gene92392.t1;Parent=MS.gene92392 |
chr8.4 | exon | 60378237 | 60378815 | 60378237 | ID=MS.gene92392.t1.exon1;Parent=MS.gene92392.t1 |
chr8.4 | CDS | 60378237 | 60378815 | 60378237 | ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1 |
chr8.4 | exon | 60376060 | 60376212 | 60376060 | ID=MS.gene92392.t1.exon2;Parent=MS.gene92392.t1 |
chr8.4 | CDS | 60376060 | 60376212 | 60376060 | ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1 |
chr8.4 | exon | 60375896 | 60375978 | 60375896 | ID=MS.gene92392.t1.exon3;Parent=MS.gene92392.t1 |
chr8.4 | CDS | 60375896 | 60375978 | 60375896 | ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1 |
chr8.4 | exon | 60375634 | 60375769 | 60375634 | ID=MS.gene92392.t1.exon4;Parent=MS.gene92392.t1 |
chr8.4 | CDS | 60375634 | 60375769 | 60375634 | ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1 |
chr8.4 | exon | 60375357 | 60375530 | 60375357 | ID=MS.gene92392.t1.exon5;Parent=MS.gene92392.t1 |
chr8.4 | CDS | 60375357 | 60375530 | 60375357 | ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1 |
chr8.4 | exon | 60374866 | 60375039 | 60374866 | ID=MS.gene92392.t1.exon6;Parent=MS.gene92392.t1 |
chr8.4 | CDS | 60374866 | 60375039 | 60374866 | ID=cds.MS.gene92392.t1;Parent=MS.gene92392.t1 |
Gene Sequence |
Protein sequence |