Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38116.t1 | XP_003618076.1 | 95.8 | 712 | 26 | 1 | 1 | 712 | 1 | 708 | 0.00E+00 | 1330.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38116.t1 | P19143 | 83.4 | 712 | 116 | 1 | 1 | 712 | 1 | 710 | 0.0e+00 | 1161.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38116.t1 | G7K0Q0 | 95.8 | 712 | 26 | 1 | 1 | 712 | 1 | 708 | 0.0e+00 | 1330.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050381 | MS.gene38116 | 0.800974 | 1.12E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene38116 | -0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene38116 | -0.814815 | 1.27E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene38116 | 0.803 | 4.30E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene38116 | 0.813643 | 2.31E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene38116 | 0.839974 | 1.15E-57 | -1.69E-46 |
| MS.gene051863 | MS.gene38116 | 0.8437 | 1.19E-58 | -1.69E-46 |
| MS.gene052802 | MS.gene38116 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene38116 | 0.832732 | 7.99E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene38116 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene056188 | MS.gene38116 | 0.806799 | 6.90E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene38116 | 0.802284 | 6.03E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene38116 | 0.842175 | 3.04E-58 | -1.69E-46 |
| MS.gene058109 | MS.gene38116 | 0.837434 | 5.21E-57 | -1.69E-46 |
| MS.gene058171 | MS.gene38116 | 0.851818 | 6.93E-61 | -1.69E-46 |
| MS.gene058173 | MS.gene38116 | 0.843897 | 1.06E-58 | -1.69E-46 |
| MS.gene058175 | MS.gene38116 | 0.857641 | 1.42E-62 | -1.69E-46 |
| MS.gene059045 | MS.gene38116 | 0.849876 | 2.44E-60 | -1.69E-46 |
| MS.gene059690 | MS.gene38116 | 0.844474 | 7.39E-59 | -1.69E-46 |
| MS.gene059691 | MS.gene38116 | 0.81853 | 1.87E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene38116 | 0.849611 | 2.89E-60 | -1.69E-46 |
| MS.gene059697 | MS.gene38116 | 0.848979 | 4.34E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene38116 | -0.800832 | 1.20E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38116.t1 | MTR_5g098720 | 95.787 | 712 | 26 | 1 | 1 | 712 | 1 | 708 | 0.0 | 1407 |
| MS.gene38116.t1 | MTR_7g101395 | 75.216 | 694 | 170 | 2 | 20 | 712 | 31 | 723 | 0.0 | 1080 |
| MS.gene38116.t1 | MTR_1g064090 | 74.711 | 692 | 173 | 2 | 22 | 712 | 21 | 711 | 0.0 | 1077 |
| MS.gene38116.t1 | MTR_7g101425 | 74.640 | 694 | 174 | 2 | 20 | 712 | 31 | 723 | 0.0 | 1071 |
| MS.gene38116.t1 | MTR_1g094780 | 69.101 | 712 | 214 | 3 | 2 | 712 | 15 | 721 | 0.0 | 1025 |
| MS.gene38116.t1 | MTR_2g094960 | 67.529 | 696 | 220 | 5 | 20 | 712 | 5 | 697 | 0.0 | 949 |
| MS.gene38116.t1 | MTR_2g095010 | 48.120 | 133 | 42 | 2 | 552 | 684 | 13 | 118 | 1.76e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38116.t1 | AT2G37040 | 71.897 | 701 | 194 | 3 | 14 | 712 | 25 | 724 | 0.0 | 1061 |
| MS.gene38116.t1 | AT3G53260 | 71.861 | 693 | 193 | 2 | 21 | 712 | 25 | 716 | 0.0 | 1052 |
| MS.gene38116.t1 | AT3G10340 | 71.552 | 696 | 194 | 4 | 19 | 712 | 13 | 706 | 0.0 | 1020 |
| MS.gene38116.t1 | AT5G04230 | 67.385 | 696 | 209 | 8 | 21 | 712 | 12 | 693 | 0.0 | 939 |
| MS.gene38116.t1 | AT5G04230 | 67.000 | 700 | 209 | 9 | 21 | 712 | 12 | 697 | 0.0 | 933 |
Find 163 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGTATTCTTATTATTTA+TGG | 0.081070 | 5.1:-79520890 | None:intergenic |
| TCTTCAACATTTGAGAAAAT+TGG | 0.164220 | 5.1:+79520913 | MS.gene38116:CDS |
| GACAAAGGTACTCCAATTTA+TGG | 0.176537 | 5.1:+79519110 | MS.gene38116:CDS |
| GCTCATGTCGTCCACATATT+TGG | 0.218922 | 5.1:+79520603 | MS.gene38116:CDS |
| CATTTAGCAGGACTGAATTC+TGG | 0.221247 | 5.1:+79519794 | MS.gene38116:CDS |
| TAAACATTTGCAGATTATAT+TGG | 0.237879 | 5.1:-79521216 | None:intergenic |
| AATCGAGGCTGCTGCTATTA+TGG | 0.246073 | 5.1:+79520021 | MS.gene38116:CDS |
| CAACGGGTATGTAACATTAA+AGG | 0.253456 | 5.1:-79520821 | None:intergenic |
| TGAAATTCCAAACAGAATTA+AGG | 0.263615 | 5.1:+79521014 | MS.gene38116:CDS |
| TCACTTGAAACATCAATTAG+AGG | 0.292963 | 5.1:-79520229 | None:intergenic |
| ACCCTTCTACAAGGCTATTC+AGG | 0.297999 | 5.1:+79519575 | MS.gene38116:CDS |
| CTACATTCCTTAATTCTGTT+TGG | 0.299095 | 5.1:-79521021 | None:intergenic |
| CGTTTAGCTATTGCTTCAAT+TGG | 0.305513 | 5.1:+79520313 | MS.gene38116:CDS |
| CAGAATTCAGTCCTGCTAAA+TGG | 0.305857 | 5.1:-79519793 | None:intergenic |
| AAACATTTGCAGATTATATT+GGG | 0.308469 | 5.1:-79521215 | None:intergenic |
| AACCAAGATGTGAACTCTTT+GGG | 0.312804 | 5.1:+79520535 | MS.gene38116:CDS |
| AGCTATTGACTTGAGGCATT+TGG | 0.314090 | 5.1:+79520639 | MS.gene38116:CDS |
| GCAAGATTGGTGTGACATTA+TGG | 0.314561 | 5.1:-79519640 | None:intergenic |
| CAAGAGCAGCTATGCTTGTC+AGG | 0.318836 | 5.1:+79519546 | MS.gene38116:CDS |
| GAAGGCCTTGCTCTTGTAAA+TGG | 0.322531 | 5.1:+79519839 | MS.gene38116:CDS |
| TATCTCCCTTTCAATCGATT+TGG | 0.337613 | 5.1:-79520188 | None:intergenic |
| CTTGCACTTTCAACTTCCTT+TGG | 0.340425 | 5.1:-79520967 | None:intergenic |
| CAACCAAGATGTGAACTCTT+TGG | 0.345139 | 5.1:+79520534 | MS.gene38116:CDS |
| TCACCAAGGCATTCCAGAAT+TGG | 0.348827 | 5.1:-79521174 | None:intergenic |
| AGAAACCCAAGTCTGGATTA+TGG | 0.349211 | 5.1:+79520415 | MS.gene38116:CDS |
| TAAAGTACTTGCTTTAGTTT+CGG | 0.350006 | 5.1:-79520847 | None:intergenic |
| CGCGGCACAGTTACCGCTTC+CGG | 0.352856 | 5.1:+79519668 | MS.gene38116:CDS |
| TCAAGTGATAAGGCTCTAAA+TGG | 0.353108 | 5.1:+79520244 | MS.gene38116:CDS |
| GTGAGGGAAGAACTGAAGAT+AGG | 0.353501 | 5.1:+79521066 | MS.gene38116:CDS |
| TTCTGGAATGCCTTGGTGAT+TGG | 0.363836 | 5.1:+79521178 | MS.gene38116:CDS |
| GACATTATGGTTGAGGAGTT+TGG | 0.363956 | 5.1:-79519627 | None:intergenic |
| TAACAGTAGCTCACATGTTA+AGG | 0.382489 | 5.1:+79519022 | MS.gene38116:CDS |
| AAAGATTGTTGATCCAATTC+TGG | 0.384374 | 5.1:+79521161 | MS.gene38116:CDS |
| CCAGTGGTAACACCATAAAT+TGG | 0.386376 | 5.1:-79519122 | None:intergenic |
| CTCTTCAGAAGGAGATGGTT+AGG | 0.390238 | 5.1:+79519186 | MS.gene38116:CDS |
| AACGGGTATGTAACATTAAA+GGG | 0.397076 | 5.1:-79520820 | None:intergenic |
| CAATCGATTTGGTTGAAAAC+CGG | 0.398842 | 5.1:-79520177 | None:intergenic |
| GTCCACAGATTGAAGTTATC+CGG | 0.407217 | 5.1:+79520158 | MS.gene38116:CDS |
| AATTTCCAAGGCACCCCAAT+TGG | 0.407679 | 5.1:+79520271 | MS.gene38116:CDS |
| TATGGTGTTACCACTGGCTT+TGG | 0.409618 | 5.1:+79519128 | MS.gene38116:CDS |
| ATTTAGCAGGACTGAATTCT+GGG | 0.415023 | 5.1:+79519795 | MS.gene38116:CDS |
| TGCTGGTAGAAACCCAAGTC+TGG | 0.415807 | 5.1:+79520408 | MS.gene38116:CDS |
| TGCTAAATGGAAAGCTTCCT+TGG | 0.419980 | 5.1:-79519780 | None:intergenic |
| AATTGATGTTTCAAGTGATA+AGG | 0.422344 | 5.1:+79520234 | MS.gene38116:CDS |
| TGGATCTGGCGTTGCTTCTA+CGG | 0.429543 | 5.1:+79519871 | MS.gene38116:CDS |
| GTGATATGTCTTGGTGGGGT+GGG | 0.429754 | 5.1:+79518966 | MS.gene38116:CDS |
| TTGACTCAGACCCTTTGAAC+TGG | 0.433639 | 5.1:+79518868 | MS.gene38116:CDS |
| AAGGAAGCTTTCCATTTAGC+AGG | 0.438602 | 5.1:+79519782 | MS.gene38116:CDS |
| GCTTTAGTTTCGGCATCAAC+GGG | 0.438751 | 5.1:-79520837 | None:intergenic |
| TCCCTCACAAACCTGTATAG+TGG | 0.440843 | 5.1:-79521051 | None:intergenic |
| CAGCTGAATTCCAGTTCAAA+GGG | 0.442428 | 5.1:-79518878 | None:intergenic |
| CTAGGCTTCTGCAATGGATC+GGG | 0.445249 | 5.1:-79520094 | None:intergenic |
| CTTGTAAATGGCACAGCTGT+TGG | 0.447001 | 5.1:+79519851 | MS.gene38116:CDS |
| CCAATTTATGGTGTTACCAC+TGG | 0.450686 | 5.1:+79519122 | MS.gene38116:CDS |
| TGCCTGAATAGCCTTGTAGA+AGG | 0.455922 | 5.1:-79519577 | None:intergenic |
| AAACTCCAATTGGGGTGCCT+TGG | 0.458485 | 5.1:-79520276 | None:intergenic |
| TATCCATCGAAACTCCAATT+GGG | 0.459183 | 5.1:-79520285 | None:intergenic |
| TGCTTTAGTTTCGGCATCAA+CGG | 0.459822 | 5.1:-79520838 | None:intergenic |
| CTCTCAGAGTCTGCAAGGGC+TGG | 0.463068 | 5.1:+79519050 | MS.gene38116:CDS |
| TGAGGGAAGAACTGAAGATA+GGG | 0.463683 | 5.1:+79521067 | MS.gene38116:CDS |
| TACATCGCTGCATTGCTAAC+CGG | 0.464170 | 5.1:+79519710 | MS.gene38116:CDS |
| ATAAGATGATGTGTAAATTC+CGG | 0.470007 | 5.1:-79519971 | None:intergenic |
| AGCTCTGGAATTTCGCCTAC+CGG | 0.473451 | 5.1:-79519729 | None:intergenic |
| TTATCCATCGAAACTCCAAT+TGG | 0.473631 | 5.1:-79520286 | None:intergenic |
| TCTAGGCTTCTGCAATGGAT+CGG | 0.477349 | 5.1:-79520095 | None:intergenic |
| TTTCAACCAAATCGATTGAA+AGG | 0.483319 | 5.1:+79520182 | MS.gene38116:CDS |
| AATGGCACAGCTGTTGGATC+TGG | 0.484897 | 5.1:+79519857 | MS.gene38116:CDS |
| GCGGTAACTGTGCCGCGTAA+TGG | 0.485660 | 5.1:-79519662 | None:intergenic |
| TCAATGACTTGTATAACAAC+GGG | 0.486075 | 5.1:+79520368 | MS.gene38116:CDS |
| GCAGCTGAATTCCAGTTCAA+AGG | 0.486076 | 5.1:-79518879 | None:intergenic |
| CAAACAGAATTAAGGAATGT+AGG | 0.494853 | 5.1:+79521022 | MS.gene38116:CDS |
| TTCAACCAAATCGATTGAAA+GGG | 0.496434 | 5.1:+79520183 | MS.gene38116:CDS |
| TAAGGCCTCTGAAGTTGCCA+TGG | 0.497043 | 5.1:+79520441 | MS.gene38116:CDS |
| TATTGACTTGAGGCATTTGG+AGG | 0.499079 | 5.1:+79520642 | MS.gene38116:CDS |
| ACAAGAGCAAGGCCTTCCTT+CGG | 0.501581 | 5.1:-79519833 | None:intergenic |
| ATTTGCAGATTATATTGGGA+TGG | 0.503269 | 5.1:-79521211 | None:intergenic |
| TGAAGTCATGCAAGGGAAGC+CGG | 0.504364 | 5.1:+79519952 | MS.gene38116:CDS |
| AGGGTTGCTGACAGGAGAAA+AGG | 0.505444 | 5.1:+79521086 | MS.gene38116:CDS |
| ACCCCAAAGAGTTCACATCT+TGG | 0.506444 | 5.1:-79520537 | None:intergenic |
| ACACAAGCTGAAGTTCCATC+CGG | 0.506990 | 5.1:+79519994 | MS.gene38116:CDS |
| GTAGGTCATACCCACTATAC+AGG | 0.507329 | 5.1:+79521040 | MS.gene38116:CDS |
| CAGCTGCAAATTCACTCAAA+GGG | 0.507593 | 5.1:+79518895 | MS.gene38116:CDS |
| AGTGATATGTCTTGGTGGGG+TGG | 0.508840 | 5.1:+79518965 | MS.gene38116:CDS |
| CAAAGGAAGTTGAAAGTGCA+AGG | 0.513174 | 5.1:+79520968 | MS.gene38116:CDS |
| CTACCAGCAGAAAGATTTGA+GGG | 0.514551 | 5.1:-79520394 | None:intergenic |
| CTGCCCTCAAATCTTTCTGC+TGG | 0.518283 | 5.1:+79520391 | MS.gene38116:CDS |
| TTTGCAGATTATATTGGGAT+GGG | 0.520814 | 5.1:-79521210 | None:intergenic |
| AGGAATTAGATCACCGGAAG+CGG | 0.521923 | 5.1:-79519681 | None:intergenic |
| AGGCGAAATTCCAGAGCTGT+TGG | 0.522740 | 5.1:+79519734 | MS.gene38116:CDS |
| CACCCCAATTGGAGTTTCGA+TGG | 0.523805 | 5.1:+79520282 | MS.gene38116:CDS |
| CTTTGCTCTTCAGAAGGAGA+TGG | 0.526889 | 5.1:+79519181 | MS.gene38116:CDS |
| CTTTGCACATGACTTGTCAC+AGG | 0.528425 | 5.1:-79520499 | None:intergenic |
| CTCTTGTAACTTCTCCTCAA+TGG | 0.530704 | 5.1:+79520131 | MS.gene38116:CDS |
| ATTAAAGGGATCATCTATGT+AGG | 0.532990 | 5.1:-79520806 | None:intergenic |
| TCTACCAGCAGAAAGATTTG+AGG | 0.533460 | 5.1:-79520395 | None:intergenic |
| TAAAACCATAATCCAGACTT+GGG | 0.534876 | 5.1:-79520420 | None:intergenic |
| TGCAAGGGTTGCATTTGAGA+AGG | 0.540341 | 5.1:+79520984 | MS.gene38116:CDS |
| GGTTAGCAATGCAGCGATGT+AGG | 0.541189 | 5.1:-79519708 | None:intergenic |
| GTGATAAGGCTCTAAATGGT+GGG | 0.542827 | 5.1:+79520248 | MS.gene38116:CDS |
| GTGCCGCGTAATGGCAAGAT+TGG | 0.543378 | 5.1:-79519653 | None:intergenic |
| AAGAAGCCAGTGATATGTCT+TGG | 0.546680 | 5.1:+79518957 | MS.gene38116:CDS |
| TCAGCTGCAAATTCACTCAA+AGG | 0.547357 | 5.1:+79518894 | MS.gene38116:CDS |
| GGGCACACTAACTATATCTC+AGG | 0.553366 | 5.1:+79518986 | MS.gene38116:CDS |
| CCCTCACAAACCTGTATAGT+GGG | 0.553390 | 5.1:-79521050 | None:intergenic |
| ATCTGTGGACCGAGCCATTG+AGG | 0.553900 | 5.1:-79520145 | None:intergenic |
| CTGAAGATAGGGTTGCTGAC+AGG | 0.554777 | 5.1:+79521078 | MS.gene38116:CDS |
| GTAACTTCTCCTCAATGGCT+CGG | 0.557606 | 5.1:+79520136 | MS.gene38116:CDS |
| AGTGATAAGGCTCTAAATGG+TGG | 0.559859 | 5.1:+79520247 | MS.gene38116:CDS |
| TTAAAACCATAATCCAGACT+TGG | 0.567038 | 5.1:-79520421 | None:intergenic |
| TTGTTCAGTTCTTCTATGTG+AGG | 0.570273 | 5.1:-79519156 | None:intergenic |
| AAAAGAGTCTCTTAATGCCA+AGG | 0.570402 | 5.1:+79519763 | MS.gene38116:CDS |
| TTCGAGTTGAAGCCGAAGGA+AGG | 0.571632 | 5.1:+79519821 | MS.gene38116:CDS |
| TTCAGAACAATATGCAGCCA+TGG | 0.573180 | 5.1:-79520458 | None:intergenic |
| TCGAGCTCTCAGAGTCTGCA+AGG | 0.573518 | 5.1:+79519045 | MS.gene38116:CDS |
| CTAAATGGTGGGAATTTCCA+AGG | 0.574643 | 5.1:+79520259 | MS.gene38116:CDS |
| ACAAGGCTTTGCTCTTCAGA+AGG | 0.576521 | 5.1:+79519175 | MS.gene38116:CDS |
| GCAGAGTGCAACCAAATATG+TGG | 0.576865 | 5.1:-79520614 | None:intergenic |
| GTCAATGACTTGTATAACAA+CGG | 0.578417 | 5.1:+79520367 | MS.gene38116:CDS |
| GCCTGAATAGCCTTGTAGAA+GGG | 0.579660 | 5.1:-79519576 | None:intergenic |
| GCAAGGGTTGCATTTGAGAA+GGG | 0.582509 | 5.1:+79520985 | MS.gene38116:CDS |
| GATCCAATTCTGGAATGCCT+TGG | 0.586654 | 5.1:+79521171 | MS.gene38116:CDS |
| ACCAAGATGTGAACTCTTTG+GGG | 0.587468 | 5.1:+79520536 | MS.gene38116:CDS |
| AAGCCAGTGATATGTCTTGG+TGG | 0.587874 | 5.1:+79518960 | MS.gene38116:CDS |
| AATGCCTCAAGTCAATAGCT+TGG | 0.587899 | 5.1:-79520636 | None:intergenic |
| ACCCACTATACAGGTTTGTG+AGG | 0.588985 | 5.1:+79521049 | MS.gene38116:CDS |
| AGTTCAAAGGGTCTGAGTCA+AGG | 0.595873 | 5.1:-79518866 | None:intergenic |
| CAGCCTCGATTTGACCCGGA+TGG | 0.598345 | 5.1:-79520009 | None:intergenic |
| ACCCCACCAAGACATATCAC+TGG | 0.599416 | 5.1:-79518963 | None:intergenic |
| TGCAGCCATGGCAACTTCAG+AGG | 0.600459 | 5.1:-79520446 | None:intergenic |
| CACAAGCTGAAGTTCCATCC+GGG | 0.607305 | 5.1:+79519995 | MS.gene38116:CDS |
| AGCCAGTGATATGTCTTGGT+GGG | 0.607306 | 5.1:+79518961 | MS.gene38116:CDS |
| GTTCTTCGAGTTGAAGCCGA+AGG | 0.609153 | 5.1:+79519817 | MS.gene38116:CDS |
| GTGTTGAAGCTAGCTGCGAG+TGG | 0.610983 | 5.1:+79519072 | MS.gene38116:CDS |
| AGCTAGCTGCGAGTGGATCG+CGG | 0.615503 | 5.1:+79519079 | MS.gene38116:CDS |
| ACTGAAGTCTCTATTGCCAA+AGG | 0.615652 | 5.1:+79520951 | MS.gene38116:CDS |
| TTGGTGTGACATTATGGTTG+AGG | 0.620076 | 5.1:-79519634 | None:intergenic |
| AACCGGATAACTTCAATCTG+TGG | 0.620117 | 5.1:-79520160 | None:intergenic |
| ACACCAATCTTGCCATTACG+CGG | 0.623972 | 5.1:+79519650 | MS.gene38116:CDS |
| AAAGGATGTTACACCAGATG+AGG | 0.624964 | 5.1:+79521104 | MS.gene38116:CDS |
| CGAGCTCTCAGAGTCTGCAA+GGG | 0.627497 | 5.1:+79519046 | MS.gene38116:CDS |
| CTGTGCCATTTACAAGAGCA+AGG | 0.628462 | 5.1:-79519844 | None:intergenic |
| GCTGCTCTTGTTGCTGACGA+AGG | 0.628755 | 5.1:-79519533 | None:intergenic |
| GGACAGAGGAATTAGATCAC+CGG | 0.631506 | 5.1:-79519687 | None:intergenic |
| ATCCATCGAAACTCCAATTG+GGG | 0.640649 | 5.1:-79520284 | None:intergenic |
| AAGAGCAGCTATGCTTGTCA+GGG | 0.640694 | 5.1:+79519547 | MS.gene38116:CDS |
| GCAGCAGCCTCGATTTGACC+CGG | 0.643264 | 5.1:-79520013 | None:intergenic |
| GCCAGTGATATGTCTTGGTG+GGG | 0.645581 | 5.1:+79518962 | MS.gene38116:CDS |
| AGGGTTAATACCCTTCTACA+AGG | 0.647865 | 5.1:+79519566 | MS.gene38116:CDS |
| GTTCCATCCGGGTCAAATCG+AGG | 0.649287 | 5.1:+79520006 | MS.gene38116:CDS |
| TGAGGAAAATTTGCTCAAAG+TGG | 0.651056 | 5.1:+79520762 | MS.gene38116:CDS |
| TCTGCCAAGCTATTGACTTG+AGG | 0.654017 | 5.1:+79520632 | MS.gene38116:CDS |
| TCACATAGAAGAACTGAACA+AGG | 0.655320 | 5.1:+79519158 | MS.gene38116:CDS |
| CCCACTATACAGGTTTGTGA+GGG | 0.659277 | 5.1:+79521050 | MS.gene38116:CDS |
| AAAGGAAGTTGAAAGTGCAA+GGG | 0.662059 | 5.1:+79520969 | MS.gene38116:CDS |
| GAATGCCTTGGTGATTGGAA+AGG | 0.664169 | 5.1:+79521183 | MS.gene38116:CDS |
| TGAGGCAGCACCAAAGCCAG+TGG | 0.666779 | 5.1:-79519138 | None:intergenic |
| GATTTCTGCTTTGAAAACAG+TGG | 0.668764 | 5.1:+79520561 | MS.gene38116:CDS |
| TCGCTGCATTGCTAACCGGT+AGG | 0.672083 | 5.1:+79519714 | MS.gene38116:CDS |
| GAGAAGTTACAAGAGCGTAA+CGG | 0.674364 | 5.1:-79520123 | None:intergenic |
| TAATCCATTTAGATTCTGTG+AGG | 0.685362 | 5.1:+79520744 | MS.gene38116:CDS |
| ATCGCGGAAAACATTGACAA+AGG | 0.691087 | 5.1:+79519095 | MS.gene38116:CDS |
| GAACTCCTTTCCAATCACCA+AGG | 0.723073 | 5.1:-79521188 | None:intergenic |
| AATGCAGCGATGTAGGACAG+AGG | 0.731936 | 5.1:-79519701 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCGTATTCTTATTATTTA+TGG | - | chr5.1:79520893-79520912 | None:intergenic | 15.0% |
| !!! | AATACTGATAATTATTCTTT+TGG | + | chr5.1:79519435-79519454 | MS.gene38116:intron | 15.0% |
| !!! | CTAAAAAACTATTTCTAAAA+GGG | - | chr5.1:79519253-79519272 | None:intergenic | 15.0% |
| !!! | GCTAAAAAACTATTTCTAAA+AGG | - | chr5.1:79519254-79519273 | None:intergenic | 20.0% |
| !!! | TAAATCATTTTTCTTTCACA+AGG | + | chr5.1:79519459-79519478 | MS.gene38116:intron | 20.0% |
| !!! | TTTTAAACTGTGCAATATTT+GGG | + | chr5.1:79519483-79519502 | MS.gene38116:CDS | 20.0% |
| !!! | TTTTTAAACTGTGCAATATT+TGG | + | chr5.1:79519482-79519501 | MS.gene38116:CDS | 20.0% |
| ! | AAATGAGATTGTTAGAGTTT+AGG | + | chr5.1:79519282-79519301 | MS.gene38116:intron | 25.0% |
| ! | ATAAGATGATGTGTAAATTC+CGG | - | chr5.1:79519974-79519993 | None:intergenic | 25.0% |
| ! | TCTTCAACATTTGAGAAAAT+TGG | + | chr5.1:79520913-79520932 | MS.gene38116:CDS | 25.0% |
| ! | TGAAATTCCAAACAGAATTA+AGG | + | chr5.1:79521014-79521033 | MS.gene38116:CDS | 25.0% |
| !! | AATTGATGTTTCAAGTGATA+AGG | + | chr5.1:79520234-79520253 | MS.gene38116:CDS | 25.0% |
| !! | ATTATGGAACACATTTTAGA+TGG | + | chr5.1:79520037-79520056 | MS.gene38116:CDS | 25.0% |
| !! | TAAAGTACTTGCTTTAGTTT+CGG | - | chr5.1:79520850-79520869 | None:intergenic | 25.0% |
| !! | TACGTTTTACTTCATCAAAA+TGG | - | chr5.1:79518923-79518942 | None:intergenic | 25.0% |
| !! | TTTTGATGAAGTAAAACGTA+TGG | + | chr5.1:79518923-79518942 | MS.gene38116:CDS | 25.0% |
| AAAGATTGTTGATCCAATTC+TGG | + | chr5.1:79521161-79521180 | MS.gene38116:CDS | 30.0% | |
| AACGGGTATGTAACATTAAA+GGG | - | chr5.1:79520823-79520842 | None:intergenic | 30.0% | |
| ATTAAAGGGATCATCTATGT+AGG | - | chr5.1:79520809-79520828 | None:intergenic | 30.0% | |
| CAAACAGAATTAAGGAATGT+AGG | + | chr5.1:79521022-79521041 | MS.gene38116:CDS | 30.0% | |
| CTACATTCCTTAATTCTGTT+TGG | - | chr5.1:79521024-79521043 | None:intergenic | 30.0% | |
| GCTTCAATTGCATAACAAAT+AGG | - | chr5.1:79519387-79519406 | None:intergenic | 30.0% | |
| TAAAACCATAATCCAGACTT+GGG | - | chr5.1:79520423-79520442 | None:intergenic | 30.0% | |
| TAATCCATTTAGATTCTGTG+AGG | + | chr5.1:79520744-79520763 | MS.gene38116:CDS | 30.0% | |
| TCACTTGAAACATCAATTAG+AGG | - | chr5.1:79520232-79520251 | None:intergenic | 30.0% | |
| TTAAAACCATAATCCAGACT+TGG | - | chr5.1:79520424-79520443 | None:intergenic | 30.0% | |
| TTCAACCAAATCGATTGAAA+GGG | + | chr5.1:79520183-79520202 | MS.gene38116:CDS | 30.0% | |
| TTTCAACCAAATCGATTGAA+AGG | + | chr5.1:79520182-79520201 | MS.gene38116:CDS | 30.0% | |
| ! | CAAGTTTGAGCTAACATTTT+TGG | - | chr5.1:79518844-79518863 | None:intergenic | 30.0% |
| ! | GTCAATGACTTGTATAACAA+CGG | + | chr5.1:79520367-79520386 | MS.gene38116:CDS | 30.0% |
| ! | TACTGTAAGCAGAGTTTTTA+AGG | + | chr5.1:79520690-79520709 | MS.gene38116:CDS | 30.0% |
| ! | TCAATGACTTGTATAACAAC+GGG | + | chr5.1:79520368-79520387 | MS.gene38116:CDS | 30.0% |
| ! | TTTTCCTCACAGAATCTAAA+TGG | - | chr5.1:79520751-79520770 | None:intergenic | 30.0% |
| !! | AAGTCTGGATTATGGTTTTA+AGG | + | chr5.1:79520423-79520442 | MS.gene38116:CDS | 30.0% |
| !!! | ACATTTTTGGTGTCATTTTG+TGG | - | chr5.1:79518831-79518850 | None:intergenic | 30.0% |
| !!! | ACTTTTTCAAATTCCTCATC+TGG | - | chr5.1:79521120-79521139 | None:intergenic | 30.0% |
| AAAAGAGTCTCTTAATGCCA+AGG | + | chr5.1:79519763-79519782 | MS.gene38116:CDS | 35.0% | |
| AACCAAGATGTGAACTCTTT+GGG | + | chr5.1:79520535-79520554 | MS.gene38116:CDS | 35.0% | |
| ATTTAGCAGGACTGAATTCT+GGG | + | chr5.1:79519795-79519814 | MS.gene38116:CDS | 35.0% | |
| CAACGGGTATGTAACATTAA+AGG | - | chr5.1:79520824-79520843 | None:intergenic | 35.0% | |
| CGTTTAGCTATTGCTTCAAT+TGG | + | chr5.1:79520313-79520332 | MS.gene38116:CDS | 35.0% | |
| TAACAGTAGCTCACATGTTA+AGG | + | chr5.1:79519022-79519041 | MS.gene38116:CDS | 35.0% | |
| TATCCATCGAAACTCCAATT+GGG | - | chr5.1:79520288-79520307 | None:intergenic | 35.0% | |
| TATCTCCCTTTCAATCGATT+TGG | - | chr5.1:79520191-79520210 | None:intergenic | 35.0% | |
| TCACATAGAAGAACTGAACA+AGG | + | chr5.1:79519158-79519177 | MS.gene38116:CDS | 35.0% | |
| TTATCCATCGAAACTCCAAT+TGG | - | chr5.1:79520289-79520308 | None:intergenic | 35.0% | |
| TTGTTCAGTTCTTCTATGTG+AGG | - | chr5.1:79519159-79519178 | None:intergenic | 35.0% | |
| ! | AAAGGAAGTTGAAAGTGCAA+GGG | + | chr5.1:79520969-79520988 | MS.gene38116:CDS | 35.0% |
| ! | GCATTAAGAGACTCTTTTGA+GGG | - | chr5.1:79519761-79519780 | None:intergenic | 35.0% |
| ! | TGAGAAAATTGGAGCTTTTG+AGG | + | chr5.1:79520924-79520943 | MS.gene38116:CDS | 35.0% |
| ! | TGAGGAAAATTTGCTCAAAG+TGG | + | chr5.1:79520762-79520781 | MS.gene38116:CDS | 35.0% |
| ! | TTTTCACTGAAGTCATGCAA+GGG | + | chr5.1:79519945-79519964 | MS.gene38116:CDS | 35.0% |
| !! | CAATCGATTTGGTTGAAAAC+CGG | - | chr5.1:79520180-79520199 | None:intergenic | 35.0% |
| !! | GACAAAGGTACTCCAATTTA+TGG | + | chr5.1:79519110-79519129 | MS.gene38116:CDS | 35.0% |
| !! | GATTTCTGCTTTGAAAACAG+TGG | + | chr5.1:79520561-79520580 | MS.gene38116:CDS | 35.0% |
| !! | TCAAGTGATAAGGCTCTAAA+TGG | + | chr5.1:79520244-79520263 | MS.gene38116:CDS | 35.0% |
| !!! | GGTGTCATTTTGTGGATTAA+TGG | - | chr5.1:79518823-79518842 | None:intergenic | 35.0% |
| AAAGGATGTTACACCAGATG+AGG | + | chr5.1:79521104-79521123 | MS.gene38116:CDS | 40.0% | |
| AACCGGATAACTTCAATCTG+TGG | - | chr5.1:79520163-79520182 | None:intergenic | 40.0% | |
| AAGAAGCCAGTGATATGTCT+TGG | + | chr5.1:79518957-79518976 | MS.gene38116:CDS | 40.0% | |
| AAGGAAGCTTTCCATTTAGC+AGG | + | chr5.1:79519782-79519801 | MS.gene38116:CDS | 40.0% | |
| AATGCCTCAAGTCAATAGCT+TGG | - | chr5.1:79520639-79520658 | None:intergenic | 40.0% | |
| ACCAAGATGTGAACTCTTTG+GGG | + | chr5.1:79520536-79520555 | MS.gene38116:CDS | 40.0% | |
| ACTGAAGTCTCTATTGCCAA+AGG | + | chr5.1:79520951-79520970 | MS.gene38116:CDS | 40.0% | |
| AGAAACCCAAGTCTGGATTA+TGG | + | chr5.1:79520415-79520434 | MS.gene38116:CDS | 40.0% | |
| AGGGTTAATACCCTTCTACA+AGG | + | chr5.1:79519566-79519585 | MS.gene38116:CDS | 40.0% | |
| ATCCATCGAAACTCCAATTG+GGG | - | chr5.1:79520287-79520306 | None:intergenic | 40.0% | |
| ATCGCGGAAAACATTGACAA+AGG | + | chr5.1:79519095-79519114 | MS.gene38116:CDS | 40.0% | |
| CAACCAAGATGTGAACTCTT+TGG | + | chr5.1:79520534-79520553 | MS.gene38116:CDS | 40.0% | |
| CAGAATTCAGTCCTGCTAAA+TGG | - | chr5.1:79519796-79519815 | None:intergenic | 40.0% | |
| CAGCTGAATTCCAGTTCAAA+GGG | - | chr5.1:79518881-79518900 | None:intergenic | 40.0% | |
| CAGCTGCAAATTCACTCAAA+GGG | + | chr5.1:79518895-79518914 | MS.gene38116:CDS | 40.0% | |
| CATTTAGCAGGACTGAATTC+TGG | + | chr5.1:79519794-79519813 | MS.gene38116:CDS | 40.0% | |
| CCAGTGGTAACACCATAAAT+TGG | - | chr5.1:79519125-79519144 | None:intergenic | 40.0% | |
| CTACCAGCAGAAAGATTTGA+GGG | - | chr5.1:79520397-79520416 | None:intergenic | 40.0% | |
| CTCTTGTAACTTCTCCTCAA+TGG | + | chr5.1:79520131-79520150 | MS.gene38116:CDS | 40.0% | |
| CTTGCACTTTCAACTTCCTT+TGG | - | chr5.1:79520970-79520989 | None:intergenic | 40.0% | |
| GACATTATGGTTGAGGAGTT+TGG | - | chr5.1:79519630-79519649 | None:intergenic | 40.0% | |
| GCAAGATTGGTGTGACATTA+TGG | - | chr5.1:79519643-79519662 | None:intergenic | 40.0% | |
| GTCCACAGATTGAAGTTATC+CGG | + | chr5.1:79520158-79520177 | MS.gene38116:CDS | 40.0% | |
| TCAGCTGCAAATTCACTCAA+AGG | + | chr5.1:79518894-79518913 | MS.gene38116:CDS | 40.0% | |
| TCTACCAGCAGAAAGATTTG+AGG | - | chr5.1:79520398-79520417 | None:intergenic | 40.0% | |
| TGAGGGAAGAACTGAAGATA+GGG | + | chr5.1:79521067-79521086 | MS.gene38116:CDS | 40.0% | |
| TGCTAAATGGAAAGCTTCCT+TGG | - | chr5.1:79519783-79519802 | None:intergenic | 40.0% | |
| TTCAGAACAATATGCAGCCA+TGG | - | chr5.1:79520461-79520480 | None:intergenic | 40.0% | |
| TTGGTGTGACATTATGGTTG+AGG | - | chr5.1:79519637-79519656 | None:intergenic | 40.0% | |
| ! | CAAAGGAAGTTGAAAGTGCA+AGG | + | chr5.1:79520968-79520987 | MS.gene38116:CDS | 40.0% |
| ! | CTAAATGGTGGGAATTTCCA+AGG | + | chr5.1:79520259-79520278 | MS.gene38116:CDS | 40.0% |
| ! | GAGAAGTTACAAGAGCGTAA+CGG | - | chr5.1:79520126-79520145 | None:intergenic | 40.0% |
| ! | GGCATTAAGAGACTCTTTTG+AGG | - | chr5.1:79519762-79519781 | None:intergenic | 40.0% |
| ! | GTTTTCACTGAAGTCATGCA+AGG | + | chr5.1:79519944-79519963 | MS.gene38116:CDS | 40.0% |
| ! | TCTTTTCTAGGCTTCTGCAA+TGG | - | chr5.1:79520103-79520122 | None:intergenic | 40.0% |
| ! | TGCTTTAGTTTCGGCATCAA+CGG | - | chr5.1:79520841-79520860 | None:intergenic | 40.0% |
| !! | AGCTATTGACTTGAGGCATT+TGG | + | chr5.1:79520639-79520658 | MS.gene38116:CDS | 40.0% |
| !! | AGTGATAAGGCTCTAAATGG+TGG | + | chr5.1:79520247-79520266 | MS.gene38116:CDS | 40.0% |
| !! | CCAATTTATGGTGTTACCAC+TGG | + | chr5.1:79519122-79519141 | MS.gene38116:CDS | 40.0% |
| !! | GTGATAAGGCTCTAAATGGT+GGG | + | chr5.1:79520248-79520267 | MS.gene38116:CDS | 40.0% |
| !! | TATTGACTTGAGGCATTTGG+AGG | + | chr5.1:79520642-79520661 | MS.gene38116:CDS | 40.0% |
| AAGAGCAGCTATGCTTGTCA+GGG | + | chr5.1:79519547-79519566 | MS.gene38116:CDS | 45.0% | |
| AAGCCAGTGATATGTCTTGG+TGG | + | chr5.1:79518960-79518979 | MS.gene38116:CDS | 45.0% | |
| AATCGAGGCTGCTGCTATTA+TGG | + | chr5.1:79520021-79520040 | MS.gene38116:CDS | 45.0% | |
| ACAAGGCTTTGCTCTTCAGA+AGG | + | chr5.1:79519175-79519194 | MS.gene38116:CDS | 45.0% | |
| ACACAAGCTGAAGTTCCATC+CGG | + | chr5.1:79519994-79520013 | MS.gene38116:CDS | 45.0% | |
| ACACCAATCTTGCCATTACG+CGG | + | chr5.1:79519650-79519669 | MS.gene38116:CDS | 45.0% | |
| ACCCACTATACAGGTTTGTG+AGG | + | chr5.1:79521049-79521068 | MS.gene38116:CDS | 45.0% | |
| ACCCCAAAGAGTTCACATCT+TGG | - | chr5.1:79520540-79520559 | None:intergenic | 45.0% | |
| ACCCTTCTACAAGGCTATTC+AGG | + | chr5.1:79519575-79519594 | MS.gene38116:CDS | 45.0% | |
| AGCCAGTGATATGTCTTGGT+GGG | + | chr5.1:79518961-79518980 | MS.gene38116:CDS | 45.0% | |
| AGGAATTAGATCACCGGAAG+CGG | - | chr5.1:79519684-79519703 | None:intergenic | 45.0% | |
| AGTTCAAAGGGTCTGAGTCA+AGG | - | chr5.1:79518869-79518888 | None:intergenic | 45.0% | |
| CAGAAGGAGATGGTTAGGTA+AGG | + | chr5.1:79519191-79519210 | MS.gene38116:intron | 45.0% | |
| CCCACTATACAGGTTTGTGA+GGG | + | chr5.1:79521050-79521069 | MS.gene38116:CDS | 45.0% | |
| CCCTCACAAACCTGTATAGT+GGG | - | chr5.1:79521053-79521072 | None:intergenic | 45.0% | |
| CTCTTCAGAAGGAGATGGTT+AGG | + | chr5.1:79519186-79519205 | MS.gene38116:CDS | 45.0% | |
| CTTGTAAATGGCACAGCTGT+TGG | + | chr5.1:79519851-79519870 | MS.gene38116:CDS | 45.0% | |
| CTTTGCTCTTCAGAAGGAGA+TGG | + | chr5.1:79519181-79519200 | MS.gene38116:CDS | 45.0% | |
| GAACTCCTTTCCAATCACCA+AGG | - | chr5.1:79521191-79521210 | None:intergenic | 45.0% | |
| GAAGGCCTTGCTCTTGTAAA+TGG | + | chr5.1:79519839-79519858 | MS.gene38116:CDS | 45.0% | |
| GCAAGGGTTGCATTTGAGAA+GGG | + | chr5.1:79520985-79521004 | MS.gene38116:CDS | 45.0% | |
| GCAGAGTGCAACCAAATATG+TGG | - | chr5.1:79520617-79520636 | None:intergenic | 45.0% | |
| GCAGCTGAATTCCAGTTCAA+AGG | - | chr5.1:79518882-79518901 | None:intergenic | 45.0% | |
| GCTCATGTCGTCCACATATT+TGG | + | chr5.1:79520603-79520622 | MS.gene38116:CDS | 45.0% | |
| GGACAGAGGAATTAGATCAC+CGG | - | chr5.1:79519690-79519709 | None:intergenic | 45.0% | |
| GGGCACACTAACTATATCTC+AGG | + | chr5.1:79518986-79519005 | MS.gene38116:CDS | 45.0% | |
| GTAACTTCTCCTCAATGGCT+CGG | + | chr5.1:79520136-79520155 | MS.gene38116:CDS | 45.0% | |
| GTAGGTCATACCCACTATAC+AGG | + | chr5.1:79521040-79521059 | MS.gene38116:CDS | 45.0% | |
| GTGAGGGAAGAACTGAAGAT+AGG | + | chr5.1:79521066-79521085 | MS.gene38116:CDS | 45.0% | |
| TACATCGCTGCATTGCTAAC+CGG | + | chr5.1:79519710-79519729 | MS.gene38116:CDS | 45.0% | |
| TCCCTCACAAACCTGTATAG+TGG | - | chr5.1:79521054-79521073 | None:intergenic | 45.0% | |
| TCTAGGCTTCTGCAATGGAT+CGG | - | chr5.1:79520098-79520117 | None:intergenic | 45.0% | |
| TGCAAGGGTTGCATTTGAGA+AGG | + | chr5.1:79520984-79521003 | MS.gene38116:CDS | 45.0% | |
| TTGACTCAGACCCTTTGAAC+TGG | + | chr5.1:79518868-79518887 | MS.gene38116:CDS | 45.0% | |
| ! | AATTTCCAAGGCACCCCAAT+TGG | + | chr5.1:79520271-79520290 | MS.gene38116:CDS | 45.0% |
| ! | AGAGCGTAACGGTCTTTTCT+AGG | - | chr5.1:79520115-79520134 | None:intergenic | 45.0% |
| ! | CTTTGCACATGACTTGTCAC+AGG | - | chr5.1:79520502-79520521 | None:intergenic | 45.0% |
| ! | GAATGCCTTGGTGATTGGAA+AGG | + | chr5.1:79521183-79521202 | MS.gene38116:CDS | 45.0% |
| ! | GCTTTAGTTTCGGCATCAAC+GGG | - | chr5.1:79520840-79520859 | None:intergenic | 45.0% |
| ! | TCACCAAGGCATTCCAGAAT+TGG | - | chr5.1:79521177-79521196 | None:intergenic | 45.0% |
| ! | TGCTTCTACGGTTCTTTTCG+AGG | + | chr5.1:79519883-79519902 | MS.gene38116:CDS | 45.0% |
| !! | CTGTGCCATTTACAAGAGCA+AGG | - | chr5.1:79519847-79519866 | None:intergenic | 45.0% |
| !! | GATCCAATTCTGGAATGCCT+TGG | + | chr5.1:79521171-79521190 | MS.gene38116:CDS | 45.0% |
| !! | GCCTGAATAGCCTTGTAGAA+GGG | - | chr5.1:79519579-79519598 | None:intergenic | 45.0% |
| !! | TATGGTGTTACCACTGGCTT+TGG | + | chr5.1:79519128-79519147 | MS.gene38116:CDS | 45.0% |
| !! | TCTGCCAAGCTATTGACTTG+AGG | + | chr5.1:79520632-79520651 | MS.gene38116:CDS | 45.0% |
| !! | TGCCTGAATAGCCTTGTAGA+AGG | - | chr5.1:79519580-79519599 | None:intergenic | 45.0% |
| !! | TTCTGGAATGCCTTGGTGAT+TGG | + | chr5.1:79521178-79521197 | MS.gene38116:CDS | 45.0% |
| AATGCAGCGATGTAGGACAG+AGG | - | chr5.1:79519704-79519723 | None:intergenic | 50.0% | |
| AATGGCACAGCTGTTGGATC+TGG | + | chr5.1:79519857-79519876 | MS.gene38116:CDS | 50.0% | |
| ACAAGAGCAAGGCCTTCCTT+CGG | - | chr5.1:79519836-79519855 | None:intergenic | 50.0% | |
| ACCCCACCAAGACATATCAC+TGG | - | chr5.1:79518966-79518985 | None:intergenic | 50.0% | |
| AGGCGAAATTCCAGAGCTGT+TGG | + | chr5.1:79519734-79519753 | MS.gene38116:CDS | 50.0% | |
| AGGGTTGCTGACAGGAGAAA+AGG | + | chr5.1:79521086-79521105 | MS.gene38116:CDS | 50.0% | |
| AGTGATATGTCTTGGTGGGG+TGG | + | chr5.1:79518965-79518984 | MS.gene38116:CDS | 50.0% | |
| CAAGAGCAGCTATGCTTGTC+AGG | + | chr5.1:79519546-79519565 | MS.gene38116:CDS | 50.0% | |
| CACAAGCTGAAGTTCCATCC+GGG | + | chr5.1:79519995-79520014 | MS.gene38116:CDS | 50.0% | |
| CACCCCAATTGGAGTTTCGA+TGG | + | chr5.1:79520282-79520301 | MS.gene38116:CDS | 50.0% | |
| CTAGGCTTCTGCAATGGATC+GGG | - | chr5.1:79520097-79520116 | None:intergenic | 50.0% | |
| CTGAAGATAGGGTTGCTGAC+AGG | + | chr5.1:79521078-79521097 | MS.gene38116:CDS | 50.0% | |
| CTGCCCTCAAATCTTTCTGC+TGG | + | chr5.1:79520391-79520410 | MS.gene38116:CDS | 50.0% | |
| GCCAGTGATATGTCTTGGTG+GGG | + | chr5.1:79518962-79518981 | MS.gene38116:CDS | 50.0% | |
| GGTTAGCAATGCAGCGATGT+AGG | - | chr5.1:79519711-79519730 | None:intergenic | 50.0% | |
| GTGATATGTCTTGGTGGGGT+GGG | + | chr5.1:79518966-79518985 | MS.gene38116:CDS | 50.0% | |
| TGAAGTCATGCAAGGGAAGC+CGG | + | chr5.1:79519952-79519971 | MS.gene38116:CDS | 50.0% | |
| TGCTGGTAGAAACCCAAGTC+TGG | + | chr5.1:79520408-79520427 | MS.gene38116:CDS | 50.0% | |
| TGGATCTGGCGTTGCTTCTA+CGG | + | chr5.1:79519871-79519890 | MS.gene38116:CDS | 50.0% | |
| ! | AAACTCCAATTGGGGTGCCT+TGG | - | chr5.1:79520279-79520298 | None:intergenic | 50.0% |
| !! | AGCTCTGGAATTTCGCCTAC+CGG | - | chr5.1:79519732-79519751 | None:intergenic | 50.0% |
| !! | GTTCTTCGAGTTGAAGCCGA+AGG | + | chr5.1:79519817-79519836 | MS.gene38116:CDS | 50.0% |
| !! | TAAGGCCTCTGAAGTTGCCA+TGG | + | chr5.1:79520441-79520460 | MS.gene38116:CDS | 50.0% |
| !! | TTCGAGTTGAAGCCGAAGGA+AGG | + | chr5.1:79519821-79519840 | MS.gene38116:CDS | 50.0% |
| !! | TTTTGAGGGTCCAACAGCTC+TGG | - | chr5.1:79519747-79519766 | None:intergenic | 50.0% |
| ATCTGTGGACCGAGCCATTG+AGG | - | chr5.1:79520148-79520167 | None:intergenic | 55.0% | |
| CGAGCTCTCAGAGTCTGCAA+GGG | + | chr5.1:79519046-79519065 | MS.gene38116:CDS | 55.0% | |
| GCTGCTCTTGTTGCTGACGA+AGG | - | chr5.1:79519536-79519555 | None:intergenic | 55.0% | |
| GTGCCGCGTAATGGCAAGAT+TGG | - | chr5.1:79519656-79519675 | None:intergenic | 55.0% | |
| GTGTTGAAGCTAGCTGCGAG+TGG | + | chr5.1:79519072-79519091 | MS.gene38116:CDS | 55.0% | |
| GTTCCATCCGGGTCAAATCG+AGG | + | chr5.1:79520006-79520025 | MS.gene38116:CDS | 55.0% | |
| TCGAGCTCTCAGAGTCTGCA+AGG | + | chr5.1:79519045-79519064 | MS.gene38116:CDS | 55.0% | |
| TCGCTGCATTGCTAACCGGT+AGG | + | chr5.1:79519714-79519733 | MS.gene38116:CDS | 55.0% | |
| TGCAGCCATGGCAACTTCAG+AGG | - | chr5.1:79520449-79520468 | None:intergenic | 55.0% | |
| AGCTAGCTGCGAGTGGATCG+CGG | + | chr5.1:79519079-79519098 | MS.gene38116:CDS | 60.0% | |
| CTCTCAGAGTCTGCAAGGGC+TGG | + | chr5.1:79519050-79519069 | MS.gene38116:CDS | 60.0% | |
| GCGGTAACTGTGCCGCGTAA+TGG | - | chr5.1:79519665-79519684 | None:intergenic | 60.0% | |
| TGAGGCAGCACCAAAGCCAG+TGG | - | chr5.1:79519141-79519160 | None:intergenic | 60.0% | |
| ! | CAGCCTCGATTTGACCCGGA+TGG | - | chr5.1:79520012-79520031 | None:intergenic | 60.0% |
| ! | GCAGCAGCCTCGATTTGACC+CGG | - | chr5.1:79520016-79520035 | None:intergenic | 60.0% |
| CGCGGCACAGTTACCGCTTC+CGG | + | chr5.1:79519668-79519687 | MS.gene38116:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 79518813 | 79521224 | 79518813 | ID=MS.gene38116 |
| chr5.1 | mRNA | 79518813 | 79521224 | 79518813 | ID=MS.gene38116.t1;Parent=MS.gene38116 |
| chr5.1 | exon | 79518813 | 79519207 | 79518813 | ID=MS.gene38116.t1.exon1;Parent=MS.gene38116.t1 |
| chr5.1 | CDS | 79518813 | 79519207 | 79518813 | ID=cds.MS.gene38116.t1;Parent=MS.gene38116.t1 |
| chr5.1 | exon | 79519481 | 79521224 | 79519481 | ID=MS.gene38116.t1.exon2;Parent=MS.gene38116.t1 |
| chr5.1 | CDS | 79519481 | 79521224 | 79519481 | ID=cds.MS.gene38116.t1;Parent=MS.gene38116.t1 |
| Gene Sequence |
| Protein sequence |
