Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42636.t1 | XP_003603213.1 | 95.5 | 247 | 5 | 3 | 1 | 243 | 1 | 245 | 1.70E-122 | 448.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42636.t1 | Q9C595 | 60.1 | 183 | 61 | 2 | 48 | 230 | 64 | 234 | 2.3e-51 | 203.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42636.t1 | G7J8F7 | 95.5 | 247 | 5 | 3 | 1 | 243 | 1 | 245 | 1.2e-122 | 448.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene42636 | 0.902922 | 5.90E-79 | -1.69E-46 |
| MS.gene049173 | MS.gene42636 | 0.864451 | 1.20E-64 | -1.69E-46 |
| MS.gene049217 | MS.gene42636 | 0.888556 | 5.32E-73 | -1.69E-46 |
| MS.gene049222 | MS.gene42636 | 0.896492 | 3.50E-76 | -1.69E-46 |
| MS.gene049232 | MS.gene42636 | 0.843296 | 1.53E-58 | -1.69E-46 |
| MS.gene049281 | MS.gene42636 | -0.819575 | 1.08E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene42636 | 0.933645 | 1.37E-95 | -1.69E-46 |
| MS.gene049320 | MS.gene42636 | 0.916206 | 2.35E-85 | -1.69E-46 |
| MS.gene04939 | MS.gene42636 | 0.849165 | 3.85E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene42636 | 0.820454 | 6.80E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene42636 | 0.836139 | 1.11E-56 | -1.69E-46 |
| MS.gene049615 | MS.gene42636 | 0.807887 | 4.06E-50 | -1.69E-46 |
| MS.gene049627 | MS.gene42636 | 0.852174 | 5.49E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene42636 | 0.867394 | 1.41E-65 | -1.69E-46 |
| MS.gene049805 | MS.gene42636 | 0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene42636 | 0.868399 | 6.72E-66 | -1.69E-46 |
| MS.gene050163 | MS.gene42636 | 0.945798 | 1.55E-104 | -1.69E-46 |
| MS.gene050165 | MS.gene42636 | 0.953648 | 1.72E-111 | -1.69E-46 |
| MS.gene050170 | MS.gene42636 | 0.816425 | 5.57E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene42636 | 0.860123 | 2.57E-63 | -1.69E-46 |
| MS.gene050333 | MS.gene42636 | 0.905861 | 2.74E-80 | -1.69E-46 |
| MS.gene050444 | MS.gene42636 | 0.85002 | 2.22E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene42636 | 0.837292 | 5.67E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene42636 | 0.932238 | 1.15E-94 | -1.69E-46 |
| MS.gene050518 | MS.gene42636 | 0.928669 | 2.08E-92 | -1.69E-46 |
| MS.gene050538 | MS.gene42636 | 0.830415 | 2.98E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene42636 | 0.875678 | 2.55E-68 | -1.69E-46 |
| MS.gene050612 | MS.gene42636 | 0.93021 | 2.28E-93 | -1.69E-46 |
| MS.gene050647 | MS.gene42636 | -0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene050675 | MS.gene42636 | 0.889706 | 1.91E-73 | -1.69E-46 |
| MS.gene050699 | MS.gene42636 | 0.900825 | 4.97E-78 | -1.69E-46 |
| MS.gene050747 | MS.gene42636 | 0.83316 | 6.26E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene42636 | 0.864038 | 1.62E-64 | -1.69E-46 |
| MS.gene05079 | MS.gene42636 | -0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene42636 | 0.853616 | 2.12E-61 | -1.69E-46 |
| MS.gene050832 | MS.gene42636 | -0.8256 | 4.29E-54 | -1.69E-46 |
| MS.gene050833 | MS.gene42636 | -0.818957 | 1.49E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene42636 | 0.851368 | 9.29E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene42636 | 0.848666 | 5.30E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene42636 | 0.890221 | 1.20E-73 | -1.69E-46 |
| MS.gene05087 | MS.gene42636 | 0.833776 | 4.39E-56 | -1.69E-46 |
| MS.gene050904 | MS.gene42636 | 0.847922 | 8.51E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene42636 | 0.837968 | 3.80E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene42636 | 0.90729 | 5.94E-81 | -1.69E-46 |
| MS.gene05100 | MS.gene42636 | 0.893752 | 4.69E-75 | -1.69E-46 |
| MS.gene051127 | MS.gene42636 | -0.805483 | 1.31E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene42636 | -0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene42636 | 0.848042 | 7.89E-60 | -1.69E-46 |
| MS.gene051268 | MS.gene42636 | 0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene42636 | 0.892062 | 2.24E-74 | -1.69E-46 |
| MS.gene051364 | MS.gene42636 | -0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene42636 | -0.823987 | 1.03E-53 | -1.69E-46 |
| MS.gene051434 | MS.gene42636 | 0.839524 | 1.51E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene42636 | 0.862257 | 5.76E-64 | -1.69E-46 |
| MS.gene051617 | MS.gene42636 | 0.811847 | 5.71E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene42636 | 0.834073 | 3.70E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene42636 | 0.820007 | 8.61E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene42636 | 0.914943 | 1.06E-84 | -1.69E-46 |
| MS.gene051858 | MS.gene42636 | 0.838344 | 3.04E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene42636 | 0.883804 | 3.29E-71 | -1.69E-46 |
| MS.gene052129 | MS.gene42636 | -0.833648 | 4.73E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene42636 | 0.858775 | 6.54E-63 | -1.69E-46 |
| MS.gene052271 | MS.gene42636 | 0.852666 | 3.97E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene42636 | 0.856607 | 2.87E-62 | -1.69E-46 |
| MS.gene052482 | MS.gene42636 | 0.835492 | 1.63E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene42636 | 0.847167 | 1.37E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene42636 | 0.813974 | 1.95E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene42636 | 0.811415 | 7.08E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene42636 | 0.836052 | 1.17E-56 | -1.69E-46 |
| MS.gene052822 | MS.gene42636 | 0.833743 | 4.48E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene42636 | 0.807281 | 5.46E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene42636 | 0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene42636 | 0.834066 | 3.72E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene42636 | 0.854358 | 1.30E-61 | -1.69E-46 |
| MS.gene052916 | MS.gene42636 | 0.851505 | 8.50E-61 | -1.69E-46 |
| MS.gene052966 | MS.gene42636 | 0.845874 | 3.09E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene42636 | 0.811022 | 8.62E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene42636 | 0.808631 | 2.82E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene42636 | 0.859419 | 4.19E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene42636 | 0.83658 | 8.61E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene42636 | 0.88438 | 2.02E-71 | -1.69E-46 |
| MS.gene053284 | MS.gene42636 | 0.843507 | 1.34E-58 | -1.69E-46 |
| MS.gene053285 | MS.gene42636 | 0.827085 | 1.90E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene42636 | 0.885335 | 8.88E-72 | -1.69E-46 |
| MS.gene053322 | MS.gene42636 | 0.828813 | 7.30E-55 | -1.69E-46 |
| MS.gene053561 | MS.gene42636 | -0.818253 | 2.16E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene42636 | 0.830426 | 2.96E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene42636 | 0.857994 | 1.12E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene42636 | 0.841034 | 6.07E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene42636 | 0.821159 | 4.68E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene42636 | -0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene054374 | MS.gene42636 | 0.838528 | 2.73E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene42636 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene42636 | 0.823962 | 1.04E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene42636 | 0.876119 | 1.80E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene42636 | 0.926413 | 4.85E-91 | -1.69E-46 |
| MS.gene054706 | MS.gene42636 | -0.808098 | 3.66E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene42636 | 0.885127 | 1.06E-71 | -1.69E-46 |
| MS.gene054954 | MS.gene42636 | 0.929407 | 7.26E-93 | -1.69E-46 |
| MS.gene054959 | MS.gene42636 | -0.815682 | 8.16E-52 | -1.69E-46 |
| MS.gene055134 | MS.gene42636 | -0.808277 | 3.35E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene42636 | -0.817436 | 3.30E-52 | -1.69E-46 |
| MS.gene055204 | MS.gene42636 | -0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene055206 | MS.gene42636 | 0.829734 | 4.36E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene42636 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene42636 | 0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene42636 | 0.904304 | 1.41E-79 | -1.69E-46 |
| MS.gene055397 | MS.gene42636 | 0.85003 | 2.21E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene42636 | 0.836559 | 8.72E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene42636 | 0.905194 | 5.55E-80 | -1.69E-46 |
| MS.gene055577 | MS.gene42636 | 0.908567 | 1.48E-81 | -1.69E-46 |
| MS.gene055634 | MS.gene42636 | 0.843904 | 1.05E-58 | -1.69E-46 |
| MS.gene055636 | MS.gene42636 | 0.835074 | 2.07E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene42636 | 0.855118 | 7.82E-62 | -1.69E-46 |
| MS.gene055647 | MS.gene42636 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene42636 | 0.827663 | 1.38E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene42636 | 0.901895 | 1.69E-78 | -1.69E-46 |
| MS.gene055750 | MS.gene42636 | 0.866873 | 2.07E-65 | -1.69E-46 |
| MS.gene055751 | MS.gene42636 | 0.907135 | 7.02E-81 | -1.69E-46 |
| MS.gene055776 | MS.gene42636 | 0.88583 | 5.80E-72 | -1.69E-46 |
| MS.gene055849 | MS.gene42636 | 0.829124 | 6.13E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene42636 | 0.861002 | 1.39E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene42636 | 0.851203 | 1.03E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene42636 | -0.808094 | 3.67E-50 | -1.69E-46 |
| MS.gene055956 | MS.gene42636 | -0.833765 | 4.42E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene42636 | 0.847608 | 1.04E-59 | -1.69E-46 |
| MS.gene056188 | MS.gene42636 | -0.815793 | 7.70E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene42636 | 0.865133 | 7.37E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene42636 | 0.834055 | 3.74E-56 | -1.69E-46 |
| MS.gene056449 | MS.gene42636 | 0.80327 | 3.78E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene42636 | 0.804683 | 1.92E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene42636 | 0.882777 | 7.83E-71 | -1.69E-46 |
| MS.gene056510 | MS.gene42636 | 0.885862 | 5.64E-72 | -1.69E-46 |
| MS.gene056549 | MS.gene42636 | 0.846641 | 1.91E-59 | -1.69E-46 |
| MS.gene056550 | MS.gene42636 | -0.84555 | 3.79E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene42636 | 0.835994 | 1.21E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene42636 | 0.917501 | 4.92E-86 | -1.69E-46 |
| MS.gene056692 | MS.gene42636 | 0.89663 | 3.07E-76 | -1.69E-46 |
| MS.gene056761 | MS.gene42636 | -0.815973 | 7.03E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene42636 | -0.825432 | 4.70E-54 | -1.69E-46 |
| MS.gene056857 | MS.gene42636 | -0.808644 | 2.80E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene42636 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene056898 | MS.gene42636 | 0.846849 | 1.68E-59 | -1.69E-46 |
| MS.gene056946 | MS.gene42636 | 0.806528 | 7.87E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene42636 | 0.858407 | 8.42E-63 | -1.69E-46 |
| MS.gene057246 | MS.gene42636 | 0.851555 | 8.22E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene42636 | 0.821733 | 3.45E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene42636 | 0.845959 | 2.93E-59 | -1.69E-46 |
| MS.gene05753 | MS.gene42636 | 0.810387 | 1.18E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene42636 | 0.849953 | 2.32E-60 | -1.69E-46 |
| MS.gene057831 | MS.gene42636 | 0.865754 | 4.69E-65 | -1.69E-46 |
| MS.gene057926 | MS.gene42636 | 0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene057986 | MS.gene42636 | 0.883653 | 3.74E-71 | -1.69E-46 |
| MS.gene058019 | MS.gene42636 | 0.808958 | 2.40E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene42636 | 0.815205 | 1.04E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene42636 | -0.851841 | 6.82E-61 | -1.69E-46 |
| MS.gene058335 | MS.gene42636 | 0.827567 | 1.46E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene42636 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene42636 | 0.829545 | 4.85E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene42636 | 0.913701 | 4.53E-84 | -1.69E-46 |
| MS.gene058544 | MS.gene42636 | 0.881243 | 2.82E-70 | -1.69E-46 |
| MS.gene058719 | MS.gene42636 | 0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene42636 | 0.875572 | 2.77E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene42636 | 0.908076 | 2.54E-81 | -1.69E-46 |
| MS.gene058838 | MS.gene42636 | 0.852934 | 3.33E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene42636 | 0.810142 | 1.34E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene42636 | 0.920921 | 6.93E-88 | -1.69E-46 |
| MS.gene059023 | MS.gene42636 | 0.895702 | 7.45E-76 | -1.69E-46 |
| MS.gene059029 | MS.gene42636 | 0.865892 | 4.25E-65 | -1.69E-46 |
| MS.gene059079 | MS.gene42636 | 0.883928 | 2.96E-71 | -1.69E-46 |
| MS.gene059102 | MS.gene42636 | -0.847956 | 8.33E-60 | -1.69E-46 |
| MS.gene05912 | MS.gene42636 | 0.855798 | 4.95E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene42636 | 0.835004 | 2.16E-56 | -1.69E-46 |
| MS.gene05914 | MS.gene42636 | 0.830263 | 3.24E-55 | -1.69E-46 |
| MS.gene059181 | MS.gene42636 | 0.82607 | 3.32E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene42636 | 0.839705 | 1.35E-57 | -1.69E-46 |
| MS.gene059479 | MS.gene42636 | -0.818225 | 2.19E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene42636 | -0.818926 | 1.52E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene42636 | 0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene42636 | 0.942561 | 5.78E-102 | -1.69E-46 |
| MS.gene059718 | MS.gene42636 | 0.896936 | 2.28E-76 | -1.69E-46 |
| MS.gene059756 | MS.gene42636 | 0.87263 | 2.74E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene42636 | 0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene42636 | 0.896427 | 3.73E-76 | -1.69E-46 |
| MS.gene059902 | MS.gene42636 | 0.836621 | 8.41E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene42636 | 0.8448 | 6.04E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene42636 | 0.807126 | 5.89E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene42636 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene42636 | -0.874019 | 9.36E-68 | -1.69E-46 |
| MS.gene060341 | MS.gene42636 | 0.815594 | 8.53E-52 | -1.69E-46 |
| MS.gene06060 | MS.gene42636 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene060703 | MS.gene42636 | 0.918916 | 8.62E-87 | -1.69E-46 |
| MS.gene060728 | MS.gene42636 | 0.821355 | 4.22E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene42636 | 0.920797 | 8.12E-88 | -1.69E-46 |
| MS.gene060778 | MS.gene42636 | 0.804692 | 1.91E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene42636 | 0.88877 | 4.40E-73 | -1.69E-46 |
| MS.gene060823 | MS.gene42636 | -0.837 | 6.73E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene42636 | 0.853782 | 1.90E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene42636 | 0.892413 | 1.62E-74 | -1.69E-46 |
| MS.gene061134 | MS.gene42636 | 0.810949 | 8.94E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene42636 | 0.913319 | 7.06E-84 | -1.69E-46 |
| MS.gene061200 | MS.gene42636 | 0.840443 | 8.67E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42636.t1 | MTR_3g105100 | 95.547 | 247 | 5 | 3 | 1 | 243 | 1 | 245 | 1.28e-167 | 462 |
| MS.gene42636.t1 | MTR_4g005520 | 47.368 | 76 | 35 | 3 | 118 | 189 | 132 | 206 | 1.27e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42636.t1 | AT5G21920 | 60.109 | 183 | 61 | 2 | 48 | 230 | 64 | 234 | 2.19e-69 | 214 |
| MS.gene42636.t1 | AT5G21920 | 59.813 | 107 | 42 | 1 | 48 | 154 | 64 | 169 | 4.49e-36 | 126 |
| MS.gene42636.t1 | AT4G27990 | 50.000 | 78 | 34 | 3 | 118 | 191 | 135 | 211 | 2.21e-14 | 70.5 |
| MS.gene42636.t1 | AT3G07430 | 48.718 | 78 | 35 | 3 | 118 | 191 | 149 | 225 | 4.28e-14 | 69.7 |
Find 77 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGATGGAGGGGAGAAAT+TGG | 0.246722 | 3.4:+91999286 | None:intergenic |
| AGAGAGTAGTTTGTTTAAGA+AGG | 0.343444 | 3.4:+91999208 | None:intergenic |
| ATTATCGACGGCGTTGGAAA+TGG | 0.365129 | 3.4:+91999268 | None:intergenic |
| TTGAGAAAGGGGAATGCTAA+TGG | 0.370536 | 3.4:+91999320 | None:intergenic |
| GCTGGCTTAGTGGTGGCTAA+TGG | 0.379478 | 3.4:-91998988 | MS.gene42636:CDS |
| AGCTAAGGAGTGGAGAAGTT+TGG | 0.382379 | 3.4:+91999241 | None:intergenic |
| TTACCTGGTGATTCCGTGGC+TGG | 0.385685 | 3.4:-91999006 | MS.gene42636:CDS |
| GAGAGTAGTTTGTTTAAGAA+GGG | 0.386231 | 3.4:+91999209 | None:intergenic |
| TGAGAAAGGGGAATGCTAAT+GGG | 0.387303 | 3.4:+91999321 | None:intergenic |
| TAACCTGTAGGCACGTGTTA+TGG | 0.398782 | 3.4:+91999171 | None:intergenic |
| TCTGTGACTGGAAGCTCAGC+AGG | 0.408614 | 3.4:+91997535 | None:intergenic |
| TTACTTCTTCACAGAACAAA+TGG | 0.426880 | 3.4:-91997465 | MS.gene42636:CDS |
| CTGCCATCGTTGCTCCTCTC+AGG | 0.431185 | 3.4:-91998888 | MS.gene42636:intron |
| ACAACACCTTGCTCGTTGCC+AGG | 0.436913 | 3.4:-91998942 | MS.gene42636:CDS |
| AGGGGAGAAATTGGAGATGG+GGG | 0.451216 | 3.4:+91999295 | None:intergenic |
| TTGCCAGGCTTGTTCTTACC+TGG | 0.458380 | 3.4:-91998927 | MS.gene42636:CDS |
| GAGGGGAGAAATTGGAGATG+GGG | 0.461207 | 3.4:+91999294 | None:intergenic |
| TGATTCCGTGGCTGGCTTAG+TGG | 0.463142 | 3.4:-91998998 | MS.gene42636:CDS |
| CCACGGAATACATTCAAATA+CGG | 0.466648 | 3.4:+91997646 | None:intergenic |
| ACGATGGCAGGAGGAGCGTT+AGG | 0.485173 | 3.4:+91998901 | None:intergenic |
| CAGAACAAGGAATGCAAGGA+TGG | 0.486196 | 3.4:+91997588 | None:intergenic |
| TGCTTAGATTGTTCTGTGAC+TGG | 0.486287 | 3.4:+91997523 | None:intergenic |
| AATGGATGAGGCAGCTTCAA+GGG | 0.496246 | 3.4:-91997447 | MS.gene42636:CDS |
| TGAGGCAGCTTCAAGGGATC+GGG | 0.498213 | 3.4:-91997441 | MS.gene42636:CDS |
| GGAGGGGAGAAATTGGAGAT+GGG | 0.501879 | 3.4:+91999293 | None:intergenic |
| ATGAGGCAGCTTCAAGGGAT+CGG | 0.504560 | 3.4:-91997442 | MS.gene42636:CDS |
| GATGTTCTAATTTGCAGAAG+TGG | 0.505099 | 3.4:+91997408 | None:intergenic |
| AAATGGATGAGGCAGCTTCA+AGG | 0.511637 | 3.4:-91997448 | MS.gene42636:CDS |
| GAGAAAGGGGAATGCTAATG+GGG | 0.512370 | 3.4:+91999322 | None:intergenic |
| AGAGTAGTTTGTTTAAGAAG+GGG | 0.518070 | 3.4:+91999210 | None:intergenic |
| TGGAGGGGAGAAATTGGAGA+TGG | 0.518639 | 3.4:+91999292 | None:intergenic |
| CTGAGAGGAGCAACGATGGC+AGG | 0.520472 | 3.4:+91998889 | None:intergenic |
| GGAACAATTATCGACGGCGT+TGG | 0.521064 | 3.4:+91999262 | None:intergenic |
| ATTCCATAACACGTGCCTAC+AGG | 0.524499 | 3.4:-91999174 | MS.gene42636:intron |
| GTAACTACAGGAACAGTAGT+AGG | 0.539864 | 3.4:-91999062 | MS.gene42636:CDS |
| TGCAGCAGCAGTGCTAGTGA+AGG | 0.542097 | 3.4:+91997561 | None:intergenic |
| AGGAGGAGCGTTAGGAAACC+AGG | 0.547677 | 3.4:+91998909 | None:intergenic |
| AAACCAGGTAAGAACAAGCC+TGG | 0.548754 | 3.4:+91998924 | None:intergenic |
| CTTCGTTTCTGTATCAGTGG+TGG | 0.549154 | 3.4:+91999379 | None:intergenic |
| GGCGTTGGAAATGGATGGAG+GGG | 0.557766 | 3.4:+91999277 | None:intergenic |
| CTTCTTCGTTTCTGTATCAG+TGG | 0.559382 | 3.4:+91999376 | None:intergenic |
| CGTATTTGAATGTATTCCGT+GGG | 0.560273 | 3.4:-91997645 | MS.gene42636:CDS |
| AACAAGCCTGGCAACGAGCA+AGG | 0.565234 | 3.4:+91998936 | None:intergenic |
| TAGAAAATGGCCGTTATGAA+CGG | 0.567715 | 3.4:-91999416 | None:intergenic |
| CCGTATTTGAATGTATTCCG+TGG | 0.568529 | 3.4:-91997646 | MS.gene42636:CDS |
| CACGGAATACATTCAAATAC+GGG | 0.572341 | 3.4:+91997647 | None:intergenic |
| AGATTCGGTGCAGTAACTAC+AGG | 0.574341 | 3.4:-91999074 | MS.gene42636:CDS |
| AGAGATCCAGTCCACCGAGA+GGG | 0.575748 | 3.4:+91997614 | None:intergenic |
| ATTCAAATACGGGTCACATA+CGG | 0.577203 | 3.4:+91997657 | None:intergenic |
| CGGCGTTGGAAATGGATGGA+GGG | 0.581108 | 3.4:+91999276 | None:intergenic |
| AGATCCAGTCCACCGAGAGG+GGG | 0.582086 | 3.4:+91997616 | None:intergenic |
| AGAACAAGGAATGCAAGGAT+GGG | 0.585406 | 3.4:+91997589 | None:intergenic |
| TCGACGGCGTTGGAAATGGA+TGG | 0.585432 | 3.4:+91999272 | None:intergenic |
| TAGTGAAGGCATTCAGAACA+AGG | 0.586028 | 3.4:+91997575 | None:intergenic |
| CATTCAGAACAAGGAATGCA+AGG | 0.587879 | 3.4:+91997584 | None:intergenic |
| AAGCCAGCCACGGAATCACC+AGG | 0.598530 | 3.4:+91999003 | None:intergenic |
| ACGGCGTTGGAAATGGATGG+AGG | 0.600079 | 3.4:+91999275 | None:intergenic |
| GTTCTAATTTGCAGAAGTGG+AGG | 0.600682 | 3.4:+91997411 | None:intergenic |
| GATCCAGTCCACCGAGAGGG+GGG | 0.602974 | 3.4:+91997617 | None:intergenic |
| TGTGAAGAAGTAACGTCGGT+AGG | 0.608391 | 3.4:+91997475 | None:intergenic |
| CGAGTCGCAACCGTTCATAA+CGG | 0.615766 | 3.4:+91999406 | None:intergenic |
| CTTCACAGAACAAATGGATG+AGG | 0.621441 | 3.4:-91997459 | MS.gene42636:CDS |
| TTCCGTGGCTGGCTTAGTGG+TGG | 0.624704 | 3.4:-91998995 | MS.gene42636:CDS |
| TGACCTGAGAGGAGCAACGA+TGG | 0.624970 | 3.4:+91998885 | None:intergenic |
| GAGATCCAGTCCACCGAGAG+GGG | 0.626757 | 3.4:+91997615 | None:intergenic |
| AGAGGAGCAACGATGGCAGG+AGG | 0.633054 | 3.4:+91998892 | None:intergenic |
| CTGTGACTGGAAGCTCAGCA+GGG | 0.634111 | 3.4:+91997536 | None:intergenic |
| GTCACAGAACAATCTAAGCA+AGG | 0.634902 | 3.4:-91997520 | MS.gene42636:CDS |
| ACTACAGGAACAGTAGTAGG+TGG | 0.635762 | 3.4:-91999059 | MS.gene42636:CDS |
| AGCCACCACTAAGCCAGCCA+CGG | 0.636007 | 3.4:+91998993 | None:intergenic |
| AAGTTTGGAACAATTATCGA+CGG | 0.638484 | 3.4:+91999256 | None:intergenic |
| GCACGTGTTATGGAATTGAG+AGG | 0.651865 | 3.4:+91999181 | None:intergenic |
| GAGAGATCCAGTCCACCGAG+AGG | 0.664113 | 3.4:+91997613 | None:intergenic |
| CTACAGGAACAGTAGTAGGT+GGG | 0.671134 | 3.4:-91999058 | MS.gene42636:CDS |
| GTTCTGTGAAGAAGTAACGT+CGG | 0.698371 | 3.4:+91997471 | None:intergenic |
| TAACATGTGACTGACCTGAG+AGG | 0.738072 | 3.4:+91998874 | None:intergenic |
| GGAATCACCAGGTAAAACAG+CGG | 0.751307 | 3.4:+91999014 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTAAATAATTAGCTACAT+TGG | + | chr3.4:91999073-91999092 | None:intergenic | 20.0% |
| !! | GATAGAAAATTATAGTAGAA+TGG | - | chr3.4:91998000-91998019 | MS.gene42636:intron | 20.0% |
| !! | TTGAATTATTAACAAAGTCA+CGG | + | chr3.4:91998187-91998206 | None:intergenic | 20.0% |
| !!! | TCAAATATTTTCTACGTAAA+TGG | + | chr3.4:91998921-91998940 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGTTGAAATGCA+AGG | - | chr3.4:91998089-91998108 | MS.gene42636:intron | 20.0% |
| ! | ACAACATACACAGATTTAAT+TGG | - | chr3.4:91999097-91999116 | MS.gene42636:intron | 25.0% |
| ! | AGCATTTCTCTTAGAAAAAT+GGG | - | chr3.4:91998599-91998618 | MS.gene42636:intron | 25.0% |
| ! | GAAAATTATAGTAGAATGGT+TGG | - | chr3.4:91998004-91998023 | MS.gene42636:intron | 25.0% |
| ! | TAGCATTTCTCTTAGAAAAA+TGG | - | chr3.4:91998598-91998617 | MS.gene42636:intron | 25.0% |
| ! | TTGTCAAAAGTTTCACAATT+GGG | + | chr3.4:91998282-91998301 | None:intergenic | 25.0% |
| !! | AAAATTTTATCTTCCATGAG+TGG | - | chr3.4:91998043-91998062 | MS.gene42636:intron | 25.0% |
| !! | AACTCTTTTCTAATTGAGTA+TGG | + | chr3.4:91998402-91998421 | None:intergenic | 25.0% |
| !! | ACCATTTGATTTCAATCAAA+TGG | + | chr3.4:91998798-91998817 | None:intergenic | 25.0% |
| !! | CTAGTTTGAAATCTTAACAA+AGG | - | chr3.4:91998310-91998329 | MS.gene42636:intron | 25.0% |
| !! | GCATCATACATCAAATATTT+TGG | + | chr3.4:91998996-91999015 | None:intergenic | 25.0% |
| !!! | AATGTTTTTGTCACATGATA+TGG | - | chr3.4:91998254-91998273 | MS.gene42636:intron | 25.0% |
| !!! | ATGTTTTTGTCACATGATAT+GGG | - | chr3.4:91998255-91998274 | MS.gene42636:intron | 25.0% |
| AATTATAGTAGAATGGTTGG+AGG | - | chr3.4:91998007-91998026 | MS.gene42636:intron | 30.0% | |
| ACATGTAAGTTCCATACTTA+AGG | - | chr3.4:91998670-91998689 | MS.gene42636:intron | 30.0% | |
| CGTAGATAGTTAGATTCTAT+TGG | + | chr3.4:91998965-91998984 | None:intergenic | 30.0% | |
| CTTGTCAAAAGTTTCACAAT+TGG | + | chr3.4:91998283-91998302 | None:intergenic | 30.0% | |
| GCCATTTGATTGAAATCAAA+TGG | - | chr3.4:91998794-91998813 | MS.gene42636:intron | 30.0% | |
| GTAGAAAATATTTGAGTAGC+TGG | - | chr3.4:91998926-91998945 | MS.gene42636:CDS | 30.0% | |
| GTGACAAAAACATTAAGACA+GGG | + | chr3.4:91998248-91998267 | None:intergenic | 30.0% | |
| TGTGACAAAAACATTAAGAC+AGG | + | chr3.4:91998249-91998268 | None:intergenic | 30.0% | |
| TTACTTCTTCACAGAACAAA+TGG | - | chr3.4:91999359-91999378 | MS.gene42636:CDS | 30.0% | |
| ! | AAGTTTGGAACAATTATCGA+CGG | + | chr3.4:91997571-91997590 | None:intergenic | 30.0% |
| ! | AGTGTTTCACGAATTGTTTT+TGG | - | chr3.4:91998460-91998479 | MS.gene42636:intron | 30.0% |
| ! | GATGATTGAAATTTTCTTGC+AGG | - | chr3.4:91998874-91998893 | MS.gene42636:intron | 30.0% |
| ! | TAAGAGAAATGCTACTTGTA+GGG | + | chr3.4:91998592-91998611 | None:intergenic | 30.0% |
| !! | AGAGAGTAGTTTGTTTAAGA+AGG | + | chr3.4:91997619-91997638 | None:intergenic | 30.0% |
| !! | AGAGTAGTTTGTTTAAGAAG+GGG | + | chr3.4:91997617-91997636 | None:intergenic | 30.0% |
| !! | GAGAGTAGTTTGTTTAAGAA+GGG | + | chr3.4:91997618-91997637 | None:intergenic | 30.0% |
| !! | TTCAAACTAGTCTCTGTTTT+TGG | - | chr3.4:91998202-91998221 | MS.gene42636:intron | 30.0% |
| ACACAAGAATTACAAGGTGA+AGG | - | chr3.4:91998522-91998541 | MS.gene42636:intron | 35.0% | |
| ATTCAAATACGGGTCACATA+CGG | + | chr3.4:91999170-91999189 | None:intergenic | 35.0% | |
| CACGGAATACATTCAAATAC+GGG | + | chr3.4:91999180-91999199 | None:intergenic | 35.0% | |
| CCACGGAATACATTCAAATA+CGG | + | chr3.4:91999181-91999200 | None:intergenic | 35.0% | |
| CGTATTTGAATGTATTCCGT+GGG | - | chr3.4:91999179-91999198 | MS.gene42636:CDS | 35.0% | |
| CTAAGAGTAAACCACCAAAT+TGG | + | chr3.4:91998373-91998392 | None:intergenic | 35.0% | |
| GTGGTTACACAAGAATTACA+AGG | - | chr3.4:91998516-91998535 | MS.gene42636:intron | 35.0% | |
| TACAAAGATAGGGACCAATT+TGG | - | chr3.4:91998356-91998375 | MS.gene42636:intron | 35.0% | |
| TACAAAGATAGGTACCAATC+TGG | + | chr3.4:91998146-91998165 | None:intergenic | 35.0% | |
| TCCACTTTAGTGGAATACAT+GGG | - | chr3.4:91998494-91998513 | MS.gene42636:intron | 35.0% | |
| TTCCACTTTAGTGGAATACA+TGG | - | chr3.4:91998493-91998512 | MS.gene42636:intron | 35.0% | |
| TTGGCAAAAGTTTCTCGATT+CGG | - | chr3.4:91998221-91998240 | MS.gene42636:intron | 35.0% | |
| ! | AACAAAGTCACGGACTAATT+TGG | + | chr3.4:91998177-91998196 | None:intergenic | 35.0% |
| ! | ACAAAGTCACGGACTAATTT+GGG | + | chr3.4:91998176-91998195 | None:intergenic | 35.0% |
| ! | AGAAAAATGGGATGCTTTTG+AGG | - | chr3.4:91998611-91998630 | MS.gene42636:intron | 35.0% |
| ! | ATTTGGTGGTTTACTCTTAG+TGG | - | chr3.4:91998373-91998392 | MS.gene42636:intron | 35.0% |
| ! | CTAAGAGAAATGCTACTTGT+AGG | + | chr3.4:91998593-91998612 | None:intergenic | 35.0% |
| ! | TGCAACTTTTACTAACCTGT+AGG | + | chr3.4:91997668-91997687 | None:intergenic | 35.0% |
| !!! | CACGAATTGTTTTTGGTCAT+TGG | - | chr3.4:91998467-91998486 | MS.gene42636:intron | 35.0% |
| AAAGATAGGGACCAATTTGG+TGG | - | chr3.4:91998359-91998378 | MS.gene42636:intron | 40.0% | |
| AAAGATAGGTACCAATCTGG+TGG | + | chr3.4:91998143-91998162 | None:intergenic | 40.0% | |
| AAGTTCCATACTTAAGGCCA+GGG | - | chr3.4:91998676-91998695 | MS.gene42636:intron | 40.0% | |
| AATGCACTGTTATCCACTCA+TGG | + | chr3.4:91998059-91998078 | None:intergenic | 40.0% | |
| ACCCATGTATTCCACTAAAG+TGG | + | chr3.4:91998498-91998517 | None:intergenic | 40.0% | |
| ACCTAGATTCTCTACGGTTA+GGG | - | chr3.4:91998748-91998767 | MS.gene42636:intron | 40.0% | |
| ACTTTAGTGGAATACATGGG+TGG | - | chr3.4:91998497-91998516 | MS.gene42636:intron | 40.0% | |
| AGAACAAGGAATGCAAGGAT+GGG | + | chr3.4:91999238-91999257 | None:intergenic | 40.0% | |
| AGGTTGGATGCTATTAGAGA+GGG | - | chr3.4:91998725-91998744 | MS.gene42636:intron | 40.0% | |
| CATTCAGAACAAGGAATGCA+AGG | + | chr3.4:91999243-91999262 | None:intergenic | 40.0% | |
| CATTGGATCTTCCACTTTAG+TGG | - | chr3.4:91998484-91998503 | MS.gene42636:intron | 40.0% | |
| CCGTATTTGAATGTATTCCG+TGG | - | chr3.4:91999178-91999197 | MS.gene42636:CDS | 40.0% | |
| CTTCACAGAACAAATGGATG+AGG | - | chr3.4:91999365-91999384 | MS.gene42636:CDS | 40.0% | |
| CTTCACGTTTCTTCACTTCT+CGG | - | chr3.4:91999027-91999046 | MS.gene42636:CDS | 40.0% | |
| CTTCTTCGTTTCTGTATCAG+TGG | + | chr3.4:91997451-91997470 | None:intergenic | 40.0% | |
| GAATCCTATCGTCAATGCAT+TGG | - | chr3.4:91998770-91998789 | MS.gene42636:intron | 40.0% | |
| GAATGAGTAAACCACCAGAT+TGG | - | chr3.4:91998129-91998148 | MS.gene42636:intron | 40.0% | |
| GAGAGAGGCTTACAAAGATA+GGG | - | chr3.4:91998346-91998365 | MS.gene42636:intron | 40.0% | |
| GTAACTACAGGAACAGTAGT+AGG | - | chr3.4:91997762-91997781 | MS.gene42636:intron | 40.0% | |
| GTCACAGAACAATCTAAGCA+AGG | - | chr3.4:91999304-91999323 | MS.gene42636:CDS | 40.0% | |
| GTCACATGTTAGTCACAATG+TGG | - | chr3.4:91997962-91997981 | MS.gene42636:intron | 40.0% | |
| GTTCTGTGAAGAAGTAACGT+CGG | + | chr3.4:91999356-91999375 | None:intergenic | 40.0% | |
| TAAGTTCCATACTTAAGGCC+AGG | - | chr3.4:91998675-91998694 | MS.gene42636:intron | 40.0% | |
| TATGCTTCGTCTACCAGATT+CGG | - | chr3.4:91997735-91997754 | MS.gene42636:intron | 40.0% | |
| TGAGAAAGGGGAATGCTAAT+GGG | + | chr3.4:91997506-91997525 | None:intergenic | 40.0% | |
| TGAGAGAGGCTTACAAAGAT+AGG | - | chr3.4:91998345-91998364 | MS.gene42636:intron | 40.0% | |
| TGAGGTGGTTGTGTTGAAAA+GGG | - | chr3.4:91998629-91998648 | MS.gene42636:intron | 40.0% | |
| TGCTTAGATTGTTCTGTGAC+TGG | + | chr3.4:91999304-91999323 | None:intergenic | 40.0% | |
| TGGGAGTAGCTTACAAAGAT+AGG | + | chr3.4:91998157-91998176 | None:intergenic | 40.0% | |
| TTGAGAAAGGGGAATGCTAA+TGG | + | chr3.4:91997507-91997526 | None:intergenic | 40.0% | |
| TTGAGGTGGTTGTGTTGAAA+AGG | - | chr3.4:91998628-91998647 | MS.gene42636:intron | 40.0% | |
| TTGTTGAAATGCAAGGACGT+GGG | - | chr3.4:91998096-91998115 | MS.gene42636:intron | 40.0% | |
| TTTGAGTAGCTGGATGCAAT+TGG | - | chr3.4:91998936-91998955 | MS.gene42636:CDS | 40.0% | |
| TTTGTTGAAATGCAAGGACG+TGG | - | chr3.4:91998095-91998114 | MS.gene42636:intron | 40.0% | |
| ! | AGAAGAACGTCTCGTTTTGT+TGG | - | chr3.4:91997466-91997485 | MS.gene42636:CDS | 40.0% |
| ! | TAGGTTGGATGCTATTAGAG+AGG | - | chr3.4:91998724-91998743 | MS.gene42636:intron | 40.0% |
| !! | AAAATGGGATGCTTTTGAGG+TGG | - | chr3.4:91998614-91998633 | MS.gene42636:intron | 40.0% |
| !! | AAGAACGTCTCGTTTTGTTG+GGG | - | chr3.4:91997468-91997487 | MS.gene42636:CDS | 40.0% |
| !! | AATTTTGCCGCTGTTTTACC+TGG | - | chr3.4:91997803-91997822 | MS.gene42636:intron | 40.0% |
| !! | GAAGAACGTCTCGTTTTGTT+GGG | - | chr3.4:91997467-91997486 | MS.gene42636:CDS | 40.0% |
| !! | TAGTGAAGGCATTCAGAACA+AGG | + | chr3.4:91999252-91999271 | None:intergenic | 40.0% |
| AAACCAGGTAAGAACAAGCC+TGG | + | chr3.4:91997903-91997922 | None:intergenic | 45.0% | |
| AAATGGATGAGGCAGCTTCA+AGG | - | chr3.4:91999376-91999395 | MS.gene42636:CDS | 45.0% | |
| AATGGATGAGGCAGCTTCAA+GGG | - | chr3.4:91999377-91999396 | MS.gene42636:CDS | 45.0% | |
| AATGGATGGAGGGGAGAAAT+TGG | + | chr3.4:91997541-91997560 | None:intergenic | 45.0% | |
| ACTACAGGAACAGTAGTAGG+TGG | - | chr3.4:91997765-91997784 | MS.gene42636:intron | 45.0% | |
| AGAGGGACCTAGATTCTCTA+CGG | - | chr3.4:91998742-91998761 | MS.gene42636:intron | 45.0% | |
| AGATGGGGGATTTGAGAAAG+GGG | + | chr3.4:91997518-91997537 | None:intergenic | 45.0% | |
| AGCTAAGGAGTGGAGAAGTT+TGG | + | chr3.4:91997586-91997605 | None:intergenic | 45.0% | |
| ATTCCATAACACGTGCCTAC+AGG | - | chr3.4:91997650-91997669 | MS.gene42636:CDS | 45.0% | |
| CAGAACAAGGAATGCAAGGA+TGG | + | chr3.4:91999239-91999258 | None:intergenic | 45.0% | |
| CTACAGGAACAGTAGTAGGT+GGG | - | chr3.4:91997766-91997785 | MS.gene42636:intron | 45.0% | |
| CTTCGTTTCTGTATCAGTGG+TGG | + | chr3.4:91997448-91997467 | None:intergenic | 45.0% | |
| GACCTAGATTCTCTACGGTT+AGG | - | chr3.4:91998747-91998766 | MS.gene42636:intron | 45.0% | |
| GAGAAAGGGGAATGCTAATG+GGG | + | chr3.4:91997505-91997524 | None:intergenic | 45.0% | |
| GAGATGGGGGATTTGAGAAA+GGG | + | chr3.4:91997519-91997538 | None:intergenic | 45.0% | |
| GCACGTGTTATGGAATTGAG+AGG | + | chr3.4:91997646-91997665 | None:intergenic | 45.0% | |
| GGAATCACCAGGTAAAACAG+CGG | + | chr3.4:91997813-91997832 | None:intergenic | 45.0% | |
| GGATTCCCTAGATCAGATAG+TGG | + | chr3.4:91998900-91998919 | None:intergenic | 45.0% | |
| TAACATGTGACTGACCTGAG+AGG | + | chr3.4:91997953-91997972 | None:intergenic | 45.0% | |
| TAACCTGTAGGCACGTGTTA+TGG | + | chr3.4:91997656-91997675 | None:intergenic | 45.0% | |
| TAAGGCCAGGGAATTGCAAT+GGG | - | chr3.4:91998688-91998707 | MS.gene42636:intron | 45.0% | |
| TCCCTAACCGTAGAGAATCT+AGG | + | chr3.4:91998752-91998771 | None:intergenic | 45.0% | |
| TGTAGTTACTGCACCGAATC+TGG | + | chr3.4:91997751-91997770 | None:intergenic | 45.0% | |
| TGTGAAGAAGTAACGTCGGT+AGG | + | chr3.4:91999352-91999371 | None:intergenic | 45.0% | |
| TGTTGAAATGCAAGGACGTG+GGG | - | chr3.4:91998097-91998116 | MS.gene42636:intron | 45.0% | |
| TTAAGGCCAGGGAATTGCAA+TGG | - | chr3.4:91998687-91998706 | MS.gene42636:intron | 45.0% | |
| ! | ATTATCGACGGCGTTGGAAA+TGG | + | chr3.4:91997559-91997578 | None:intergenic | 45.0% |
| ! | TGTTTTACCTGGTGATTCCG+TGG | - | chr3.4:91997814-91997833 | MS.gene42636:intron | 45.0% |
| !! | AATGGGAGGTGTTGGATTGT+AGG | - | chr3.4:91998705-91998724 | MS.gene42636:intron | 45.0% |
| !! | AGATTCGGTGCAGTAACTAC+AGG | - | chr3.4:91997750-91997769 | MS.gene42636:intron | 45.0% |
| !! | CAATTCCCTGGCCTTAAGTA+TGG | + | chr3.4:91998684-91998703 | None:intergenic | 45.0% |
| !!! | GAAGGGGTTTTGAGAAGCTA+AGG | + | chr3.4:91997601-91997620 | None:intergenic | 45.0% |
| !!! | GGTTTTGAGAAGCTAAGGAG+TGG | + | chr3.4:91997596-91997615 | None:intergenic | 45.0% |
| AGGGGAGAAATTGGAGATGG+GGG | + | chr3.4:91997532-91997551 | None:intergenic | 50.0% | |
| ATGAGGCAGCTTCAAGGGAT+CGG | - | chr3.4:91999382-91999401 | MS.gene42636:CDS | 50.0% | |
| CAAGGACGTGGGGTTATTAG+TGG | - | chr3.4:91998107-91998126 | MS.gene42636:intron | 50.0% | |
| CGAGTCGCAACCGTTCATAA+CGG | + | chr3.4:91997421-91997440 | None:intergenic | 50.0% | |
| GAGGGGAGAAATTGGAGATG+GGG | + | chr3.4:91997533-91997552 | None:intergenic | 50.0% | |
| GAGTAGCTGGATGCAATTGG+TGG | - | chr3.4:91998939-91998958 | MS.gene42636:CDS | 50.0% | |
| GCAGGCCACTATCTGATCTA+GGG | - | chr3.4:91998892-91998911 | MS.gene42636:CDS | 50.0% | |
| GGAACAATTATCGACGGCGT+TGG | + | chr3.4:91997565-91997584 | None:intergenic | 50.0% | |
| GGAGATGGGGGATTTGAGAA+AGG | + | chr3.4:91997520-91997539 | None:intergenic | 50.0% | |
| GGAGGGGAGAAATTGGAGAT+GGG | + | chr3.4:91997534-91997553 | None:intergenic | 50.0% | |
| TGCAGGCCACTATCTGATCT+AGG | - | chr3.4:91998891-91998910 | MS.gene42636:CDS | 50.0% | |
| TGGAGGGGAGAAATTGGAGA+TGG | + | chr3.4:91997535-91997554 | None:intergenic | 50.0% | |
| ! | GGAATTGCAATGGGAGGTGT+TGG | - | chr3.4:91998697-91998716 | MS.gene42636:intron | 50.0% |
| ! | GGCTCCAATGCATTGACGAT+AGG | + | chr3.4:91998777-91998796 | None:intergenic | 50.0% |
| ! | TTGCCAGGCTTGTTCTTACC+TGG | - | chr3.4:91997897-91997916 | MS.gene42636:intron | 50.0% |
| !! | GGAGGTGTTGGATTGTAGGT+TGG | - | chr3.4:91998709-91998728 | MS.gene42636:intron | 50.0% |
| !! | GGCAGAGACTGATTTGAGAG+AGG | - | chr3.4:91998331-91998350 | MS.gene42636:intron | 50.0% |
| AACAAGCCTGGCAACGAGCA+AGG | + | chr3.4:91997891-91997910 | None:intergenic | 55.0% | |
| ACAACACCTTGCTCGTTGCC+AGG | - | chr3.4:91997882-91997901 | MS.gene42636:intron | 55.0% | |
| AGAGATCCAGTCCACCGAGA+GGG | + | chr3.4:91999213-91999232 | None:intergenic | 55.0% | |
| CACCTCCCATTGCAATTCCC+TGG | + | chr3.4:91998696-91998715 | None:intergenic | 55.0% | |
| CTGTGACTGGAAGCTCAGCA+GGG | + | chr3.4:91999291-91999310 | None:intergenic | 55.0% | |
| TCTGTGACTGGAAGCTCAGC+AGG | + | chr3.4:91999292-91999311 | None:intergenic | 55.0% | |
| TGACCTGAGAGGAGCAACGA+TGG | + | chr3.4:91997942-91997961 | None:intergenic | 55.0% | |
| TGAGGCAGCTTCAAGGGATC+GGG | - | chr3.4:91999383-91999402 | MS.gene42636:CDS | 55.0% | |
| TGCAGCAGCAGTGCTAGTGA+AGG | + | chr3.4:91999266-91999285 | None:intergenic | 55.0% | |
| TTACCTGGTGATTCCGTGGC+TGG | - | chr3.4:91997818-91997837 | MS.gene42636:intron | 55.0% | |
| ! | ACGGCGTTGGAAATGGATGG+AGG | + | chr3.4:91997552-91997571 | None:intergenic | 55.0% |
| ! | CGGCGTTGGAAATGGATGGA+GGG | + | chr3.4:91997551-91997570 | None:intergenic | 55.0% |
| ! | GCTGGCTTAGTGGTGGCTAA+TGG | - | chr3.4:91997836-91997855 | MS.gene42636:intron | 55.0% |
| ! | GGCGTTGGAAATGGATGGAG+GGG | + | chr3.4:91997550-91997569 | None:intergenic | 55.0% |
| ! | TCGACGGCGTTGGAAATGGA+TGG | + | chr3.4:91997555-91997574 | None:intergenic | 55.0% |
| !! | AGGAGGAGCGTTAGGAAACC+AGG | + | chr3.4:91997918-91997937 | None:intergenic | 55.0% |
| !! | TGATTCCGTGGCTGGCTTAG+TGG | - | chr3.4:91997826-91997845 | MS.gene42636:intron | 55.0% |
| AAGCCAGCCACGGAATCACC+AGG | + | chr3.4:91997824-91997843 | None:intergenic | 60.0% | |
| AGAGGAGCAACGATGGCAGG+AGG | + | chr3.4:91997935-91997954 | None:intergenic | 60.0% | |
| AGATCCAGTCCACCGAGAGG+GGG | + | chr3.4:91999211-91999230 | None:intergenic | 60.0% | |
| AGCCACCACTAAGCCAGCCA+CGG | + | chr3.4:91997834-91997853 | None:intergenic | 60.0% | |
| CTGAGAGGAGCAACGATGGC+AGG | + | chr3.4:91997938-91997957 | None:intergenic | 60.0% | |
| CTGCCATCGTTGCTCCTCTC+AGG | - | chr3.4:91997936-91997955 | MS.gene42636:intron | 60.0% | |
| GAGAGATCCAGTCCACCGAG+AGG | + | chr3.4:91999214-91999233 | None:intergenic | 60.0% | |
| GAGATCCAGTCCACCGAGAG+GGG | + | chr3.4:91999212-91999231 | None:intergenic | 60.0% | |
| GGCCAGGGAATTGCAATGGG+AGG | - | chr3.4:91998691-91998710 | MS.gene42636:intron | 60.0% | |
| !! | ACGATGGCAGGAGGAGCGTT+AGG | + | chr3.4:91997926-91997945 | None:intergenic | 60.0% |
| !! | TTCCGTGGCTGGCTTAGTGG+TGG | - | chr3.4:91997829-91997848 | MS.gene42636:intron | 60.0% |
| CGAGAGGGGGGATAAGCCCA+CGG | + | chr3.4:91999198-91999217 | None:intergenic | 65.0% | |
| CGTGGGCTTATCCCCCCTCT+CGG | - | chr3.4:91999196-91999215 | MS.gene42636:CDS | 65.0% | |
| GATCCAGTCCACCGAGAGGG+GGG | + | chr3.4:91999210-91999229 | None:intergenic | 65.0% | |
| TATCCCCCCTCTCGGTGGAC+TGG | - | chr3.4:91999204-91999223 | MS.gene42636:CDS | 65.0% | |
| GGGCTTATCCCCCCTCTCGG+TGG | - | chr3.4:91999199-91999218 | MS.gene42636:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91997414 | 91999432 | 91997414 | ID=MS.gene42636 |
| chr3.4 | mRNA | 91997414 | 91999432 | 91997414 | ID=MS.gene42636.t1;Parent=MS.gene42636 |
| chr3.4 | exon | 91999175 | 91999432 | 91999175 | ID=MS.gene42636.t1.exon1;Parent=MS.gene42636.t1 |
| chr3.4 | CDS | 91999175 | 91999432 | 91999175 | ID=cds.MS.gene42636.t1;Parent=MS.gene42636.t1 |
| chr3.4 | exon | 91998889 | 91999094 | 91998889 | ID=MS.gene42636.t1.exon2;Parent=MS.gene42636.t1 |
| chr3.4 | CDS | 91998889 | 91999094 | 91998889 | ID=cds.MS.gene42636.t1;Parent=MS.gene42636.t1 |
| chr3.4 | exon | 91997414 | 91997681 | 91997414 | ID=MS.gene42636.t1.exon3;Parent=MS.gene42636.t1 |
| chr3.4 | CDS | 91997414 | 91997681 | 91997414 | ID=cds.MS.gene42636.t1;Parent=MS.gene42636.t1 |
| Gene Sequence |
| Protein sequence |
