Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05630.t1 | XP_013460119.1 | 89.3 | 439 | 29 | 2 | 1 | 437 | 1 | 423 | 2.60E-211 | 744.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05630.t1 | Q8VXY7 | 59.0 | 434 | 157 | 4 | 7 | 437 | 35 | 450 | 1.1e-138 | 494.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05630.t1 | A0A072V7J4 | 89.3 | 439 | 29 | 2 | 1 | 437 | 1 | 423 | 1.9e-211 | 744.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59944 | MS.gene05630 | PPI |
| MS.gene036759 | MS.gene05630 | PPI |
| MS.gene62397 | MS.gene05630 | PPI |
| MS.gene59641 | MS.gene05630 | PPI |
| MS.gene036758 | MS.gene05630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05630.t1 | MTR_3g462280 | 89.294 | 439 | 29 | 2 | 1 | 437 | 1 | 423 | 0.0 | 748 |
| MS.gene05630.t1 | MTR_0003s0470 | 78.537 | 410 | 72 | 1 | 28 | 437 | 22 | 415 | 0.0 | 659 |
| MS.gene05630.t1 | MTR_4g114710 | 45.366 | 410 | 194 | 7 | 32 | 437 | 15 | 398 | 6.98e-112 | 335 |
| MS.gene05630.t1 | MTR_0008s0170 | 29.953 | 424 | 255 | 9 | 32 | 437 | 11 | 410 | 9.75e-51 | 177 |
| MS.gene05630.t1 | MTR_0008s0130 | 30.216 | 417 | 248 | 11 | 40 | 437 | 18 | 410 | 9.71e-48 | 169 |
| MS.gene05630.t1 | MTR_2g011600 | 29.909 | 438 | 260 | 12 | 21 | 437 | 8 | 419 | 1.38e-46 | 166 |
| MS.gene05630.t1 | MTR_4g050990 | 30.622 | 418 | 245 | 8 | 40 | 437 | 18 | 410 | 1.30e-43 | 158 |
| MS.gene05630.t1 | MTR_2g089520 | 30.622 | 418 | 245 | 8 | 40 | 437 | 18 | 410 | 1.30e-43 | 158 |
| MS.gene05630.t1 | MTR_2g011580 | 29.676 | 401 | 238 | 9 | 57 | 437 | 2 | 378 | 5.70e-43 | 155 |
| MS.gene05630.t1 | MTR_2g047968 | 30.588 | 425 | 251 | 10 | 32 | 437 | 11 | 410 | 2.97e-42 | 155 |
| MS.gene05630.t1 | MTR_2g011600 | 30.458 | 371 | 211 | 11 | 90 | 437 | 22 | 368 | 2.25e-37 | 140 |
| MS.gene05630.t1 | MTR_1g071120 | 27.193 | 342 | 205 | 8 | 40 | 363 | 60 | 375 | 1.56e-31 | 125 |
| MS.gene05630.t1 | MTR_8g007285 | 29.428 | 367 | 208 | 10 | 98 | 437 | 20 | 362 | 6.13e-28 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05630.t1 | AT1G70330 | 58.986 | 434 | 157 | 4 | 7 | 437 | 35 | 450 | 3.28e-176 | 500 |
| MS.gene05630.t1 | AT1G02630 | 44.226 | 407 | 195 | 7 | 32 | 437 | 14 | 389 | 4.30e-111 | 332 |
| MS.gene05630.t1 | AT1G02630 | 37.592 | 407 | 178 | 8 | 32 | 437 | 14 | 345 | 8.68e-81 | 253 |
| MS.gene05630.t1 | AT4G05120 | 29.977 | 427 | 256 | 9 | 31 | 437 | 9 | 412 | 1.62e-46 | 166 |
| MS.gene05630.t1 | AT4G05120 | 29.977 | 427 | 256 | 9 | 31 | 437 | 9 | 412 | 1.62e-46 | 166 |
| MS.gene05630.t1 | AT4G05110 | 28.770 | 431 | 263 | 9 | 27 | 437 | 6 | 412 | 1.66e-43 | 157 |
| MS.gene05630.t1 | AT4G05110 | 28.770 | 431 | 263 | 9 | 27 | 437 | 6 | 412 | 1.66e-43 | 157 |
| MS.gene05630.t1 | AT4G05110 | 28.770 | 431 | 263 | 9 | 27 | 437 | 6 | 412 | 2.48e-43 | 158 |
| MS.gene05630.t1 | AT4G05130 | 28.082 | 438 | 265 | 13 | 23 | 437 | 2 | 412 | 5.47e-43 | 156 |
| MS.gene05630.t1 | AT1G61630 | 28.744 | 414 | 249 | 7 | 45 | 437 | 24 | 412 | 2.81e-41 | 152 |
| MS.gene05630.t1 | AT4G05140 | 27.494 | 411 | 257 | 9 | 45 | 437 | 26 | 413 | 2.69e-39 | 146 |
| MS.gene05630.t1 | AT3G09990 | 26.698 | 427 | 268 | 9 | 31 | 437 | 12 | 413 | 7.74e-38 | 142 |
Find 96 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCGGCGGTTGTGGTTTC+TGG | 0.124080 | 3.2:+53305441 | MS.gene05630:CDS |
| ATCTCTGTCCGGAAGAATTT+TGG | 0.155630 | 3.2:-53307970 | None:intergenic |
| GGTCTATCATCTCTTGGTTT+TGG | 0.180124 | 3.2:+53308145 | MS.gene05630:CDS |
| TTGGTGCAGGGATCTATTCT+TGG | 0.230884 | 3.2:+53305477 | MS.gene05630:CDS |
| ATGTCCACTCCCAACGTCTT+AGG | 0.260735 | 3.2:+53307788 | MS.gene05630:CDS |
| GGTGGGGTTGGGTTGTATAA+TGG | 0.275396 | 3.2:+53305405 | MS.gene05630:CDS |
| GTGGGGTTGGGTTGTATAAT+GGG | 0.283938 | 3.2:+53305406 | MS.gene05630:CDS |
| TGGGTCTGCCGGTGAGTTGC+CGG | 0.304114 | 3.2:+53305497 | MS.gene05630:CDS |
| CATGAGATTTGTGGCGGTTA+AGG | 0.318832 | 3.2:-53305299 | None:intergenic |
| ACTAAGTGCCATTTGTCTTC+TGG | 0.335514 | 3.2:-53305114 | None:intergenic |
| TTCATCGTAGTACTTCATAA+TGG | 0.339715 | 3.2:-53307599 | None:intergenic |
| TTCTGGTGTGGCTAATGCTT+TGG | 0.355813 | 3.2:+53305458 | MS.gene05630:CDS |
| ATTTATGTTAAGGGTGGGGT+TGG | 0.356101 | 3.2:+53305393 | MS.gene05630:CDS |
| TCCTCGCTATCTAGTCTTGT+TGG | 0.360452 | 3.2:+53305261 | MS.gene05630:CDS |
| CTTGATGTGATTTATGTTAA+GGG | 0.362979 | 3.2:+53305384 | MS.gene05630:CDS |
| CTGCTGGGTCTATCATCTCT+TGG | 0.374336 | 3.2:+53308139 | MS.gene05630:CDS |
| TGGTGCAGGGATCTATTCTT+GGG | 0.382112 | 3.2:+53305478 | MS.gene05630:CDS |
| TGCACAGTCCAAAATTCTTC+CGG | 0.383665 | 3.2:+53307962 | MS.gene05630:CDS |
| GTGACACTTGCAATATTTCC+TGG | 0.386495 | 3.2:+53307751 | MS.gene05630:CDS |
| TAGCAAGTAACAAGGAGAAT+TGG | 0.394386 | 3.2:-53307820 | None:intergenic |
| CTACGATGAACTAAAGATTC+AGG | 0.394767 | 3.2:+53307612 | MS.gene05630:CDS |
| GCTTGATGTGATTTATGTTA+AGG | 0.396843 | 3.2:+53305383 | MS.gene05630:CDS |
| AGCGTGTTGTTCTTAGCTTT+TGG | 0.401368 | 3.2:+53308111 | MS.gene05630:CDS |
| TTTATGTTAAGGGTGGGGTT+GGG | 0.402341 | 3.2:+53305394 | MS.gene05630:CDS |
| TATAACGTGTTTGATCTTGT+TGG | 0.428995 | 3.2:+53307841 | MS.gene05630:CDS |
| TCATCGTAGTACTTCATAAT+GGG | 0.429570 | 3.2:-53307598 | None:intergenic |
| ATTGTTGGGAGTGCTGCTTC+TGG | 0.431749 | 3.2:+53305540 | MS.gene05630:CDS |
| ACAATCAAGTGGTATGGCTT+TGG | 0.441691 | 3.2:+53307709 | MS.gene05630:CDS |
| GGATCTATTCTTGGGTCTGC+CGG | 0.448560 | 3.2:+53305486 | MS.gene05630:CDS |
| TGTCCACTCCCAACGTCTTA+GGG | 0.452883 | 3.2:+53307789 | MS.gene05630:CDS |
| TGTTACTGTTGCGGCGGTTG+TGG | 0.456462 | 3.2:+53305434 | MS.gene05630:CDS |
| TGTGGCTAATGCTTTGGTGC+AGG | 0.457275 | 3.2:+53305464 | MS.gene05630:CDS |
| CTAGGAGGTATACCGCAGTC+AGG | 0.461177 | 3.2:-53307870 | None:intergenic |
| TGTGATTTATGTTAAGGGTG+GGG | 0.467921 | 3.2:+53305389 | MS.gene05630:CDS |
| AACGACAATTGTCCTTTGAC+TGG | 0.468203 | 3.2:+53307649 | MS.gene05630:CDS |
| TACACGCAGGCTGTCATTGT+TGG | 0.479457 | 3.2:+53305525 | MS.gene05630:CDS |
| GTCCTTTGACTGGATCTGTC+TGG | 0.480120 | 3.2:+53307659 | MS.gene05630:CDS |
| AAAGATTCAGGCAGTGGCTG+TGG | 0.487085 | 3.2:+53307624 | MS.gene05630:CDS |
| ACACGCAGGCTGTCATTGTT+GGG | 0.488538 | 3.2:+53305526 | MS.gene05630:CDS |
| CTGTCTGGAGATCAACTGTA+TGG | 0.490108 | 3.2:+53307674 | MS.gene05630:CDS |
| ATCTATTTCACACTTGGCAT+CGG | 0.499105 | 3.2:+53305144 | MS.gene05630:CDS |
| TTGCAGCATGCAGAGACTGC+AGG | 0.503868 | 3.2:+53308081 | MS.gene05630:CDS |
| GCATCGGTTACTTGTTCCCA+TGG | 0.504050 | 3.2:+53305160 | MS.gene05630:CDS |
| GGATTCTTGTTTCTTTCCTG+AGG | 0.509048 | 3.2:+53307450 | MS.gene05630:CDS |
| ATGTGATTTATGTTAAGGGT+GGG | 0.510376 | 3.2:+53305388 | MS.gene05630:CDS |
| TCACATAAGCATGAGATTTG+TGG | 0.511557 | 3.2:-53305308 | None:intergenic |
| TGCAAGCATCCCAAGAAGAG+AGG | 0.517907 | 3.2:-53307943 | None:intergenic |
| AAATCATCATCACACTAGTC+AGG | 0.525923 | 3.2:-53308038 | None:intergenic |
| GATGTGATTTATGTTAAGGG+TGG | 0.529521 | 3.2:+53305387 | MS.gene05630:CDS |
| ACTCCCAACGTCTTAGGGAT+TGG | 0.532349 | 3.2:+53307794 | MS.gene05630:CDS |
| TTCTGAAGGTAAAAGAAGAA+TGG | 0.533093 | 3.2:-53305067 | None:intergenic |
| ACAGCCTTTGTAATATCCTC+AGG | 0.534125 | 3.2:-53307466 | None:intergenic |
| ATACCAATCCCTAAGACGTT+GGG | 0.536109 | 3.2:-53307797 | None:intergenic |
| TGTGATTATGTTCATATGCA+TGG | 0.539930 | 3.2:+53307549 | MS.gene05630:CDS |
| TTTGTCCCTGAAGCTTCTGA+AGG | 0.546444 | 3.2:-53305081 | None:intergenic |
| GATACCAATCCCTAAGACGT+TGG | 0.546904 | 3.2:-53307798 | None:intergenic |
| GTGGCTAATGCTTTGGTGCA+GGG | 0.547793 | 3.2:+53305465 | MS.gene05630:CDS |
| TATATAATCTATTTCACACT+TGG | 0.550612 | 3.2:+53305138 | MS.gene05630:CDS |
| ATACCACTTGATTGTTCCCA+TGG | 0.553629 | 3.2:-53307701 | None:intergenic |
| ATGGGAACAATCAAGTGGTA+TGG | 0.558830 | 3.2:+53307703 | MS.gene05630:CDS |
| AATCCCTAAGACGTTGGGAG+TGG | 0.563334 | 3.2:-53307792 | None:intergenic |
| GGCGGTTGTGGTTTCTGGTG+TGG | 0.565202 | 3.2:+53305446 | MS.gene05630:CDS |
| TGAACTAAAGATTCAGGCAG+TGG | 0.567876 | 3.2:+53307618 | MS.gene05630:CDS |
| TTGTGACAGGAATCTCTGTC+CGG | 0.573239 | 3.2:-53307981 | None:intergenic |
| TGCAGCATGCAGAGACTGCA+GGG | 0.573475 | 3.2:+53308082 | MS.gene05630:CDS |
| ACAGCCTGCGTGTACCTCTC+CGG | 0.575693 | 3.2:-53305516 | None:intergenic |
| ACACAAGTCAGTATTGTGAC+AGG | 0.577437 | 3.2:-53307994 | None:intergenic |
| CTTTCCTGAGGATATTACAA+AGG | 0.584654 | 3.2:+53307462 | MS.gene05630:CDS |
| ACATAAATCACATCAAGCAA+TGG | 0.599375 | 3.2:-53305378 | None:intergenic |
| TGAAGGTAAAAGAAGAATGG+TGG | 0.603066 | 3.2:-53305064 | None:intergenic |
| ATTTCCTGGTTTCATTACCG+AGG | 0.608464 | 3.2:+53307765 | MS.gene05630:CDS |
| GTACCTCTCCGGCAACTCAC+CGG | 0.609722 | 3.2:-53305505 | None:intergenic |
| CTCCAGACAGATCCAGTCAA+AGG | 0.612500 | 3.2:-53307661 | None:intergenic |
| CTGTGATGAATGCGTTCCAT+GGG | 0.612636 | 3.2:-53305176 | None:intergenic |
| CTGCCGGTGAGTTGCCGGAG+AGG | 0.613909 | 3.2:+53305502 | MS.gene05630:CDS |
| GCAAGCATCCCAAGAAGAGA+GGG | 0.615711 | 3.2:-53307942 | None:intergenic |
| GCTGTGATGAATGCGTTCCA+TGG | 0.616389 | 3.2:-53305177 | None:intergenic |
| ATACGGTCAACGCTAGCATG+AGG | 0.617589 | 3.2:-53305225 | None:intergenic |
| AAGATAAGAGAAATAGTCAA+CGG | 0.620045 | 3.2:-53305199 | None:intergenic |
| TGGGTTCTATGTTACTGTTG+CGG | 0.624540 | 3.2:+53305425 | MS.gene05630:CDS |
| GCTTATGTGAGGATCAATGT+TGG | 0.624568 | 3.2:+53305321 | MS.gene05630:CDS |
| AGGAAACTAGAGCAAAGATA+CGG | 0.628246 | 3.2:-53305242 | None:intergenic |
| TAGGAGGTATACCGCAGTCA+GGG | 0.631754 | 3.2:-53307869 | None:intergenic |
| ACATCCTCGGTAATGAAACC+AGG | 0.632229 | 3.2:-53307769 | None:intergenic |
| ATCAACTGTATGGAATACCA+TGG | 0.637444 | 3.2:+53307684 | MS.gene05630:CDS |
| TACGGTCAACGCTAGCATGA+GGG | 0.641215 | 3.2:-53305224 | None:intergenic |
| ACCAACAAGACTAGATAGCG+AGG | 0.646084 | 3.2:-53305262 | None:intergenic |
| CATAAGCATGAGATTTGTGG+CGG | 0.647174 | 3.2:-53305305 | None:intergenic |
| TCAACTGTATGGAATACCAT+GGG | 0.656398 | 3.2:+53307685 | MS.gene05630:CDS |
| ACAAATCTCATGCTTATGTG+AGG | 0.662169 | 3.2:+53305310 | MS.gene05630:CDS |
| ACGTTGGGAGTGGACATCCT+CGG | 0.667941 | 3.2:-53307782 | None:intergenic |
| ATACCATGGGAACAATCAAG+TGG | 0.670798 | 3.2:+53307698 | MS.gene05630:CDS |
| ACACGTTATAGCAAGTAACA+AGG | 0.684734 | 3.2:-53307828 | None:intergenic |
| GTTCTATGTTACTGTTGCGG+CGG | 0.685493 | 3.2:+53305428 | MS.gene05630:CDS |
| GTTGCCGGAGAGGTACACGC+AGG | 0.715210 | 3.2:+53305512 | MS.gene05630:CDS |
| TGTTGGTAAATCCCTGACTG+CGG | 0.727177 | 3.2:+53307858 | MS.gene05630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTATTATAATATCCA+GGG | + | chr3.2:53306703-53306722 | MS.gene05630:intron | 10.0% |
| !! | AAAACATAAATAATATGAAG+AGG | - | chr3.2:53307421-53307440 | None:intergenic | 15.0% |
| !! | ATTATTATATATTGTGTTAG+GGG | + | chr3.2:53305684-53305703 | MS.gene05630:intron | 15.0% |
| !! | CATTATTATATATTGTGTTA+GGG | + | chr3.2:53305683-53305702 | MS.gene05630:intron | 15.0% |
| !! | TAATAATAAAAGAAATGCTT+AGG | - | chr3.2:53306694-53306713 | None:intergenic | 15.0% |
| !!! | CTTTTATTATTATAATATCC+AGG | + | chr3.2:53306702-53306721 | MS.gene05630:intron | 15.0% |
| !!! | TATTTATGTTTTTGATTTCA+GGG | + | chr3.2:53307429-53307448 | MS.gene05630:intron | 15.0% |
| !!! | TTATTTATGTTTTTGATTTC+AGG | + | chr3.2:53307428-53307447 | MS.gene05630:intron | 15.0% |
| !! | ATCAGATAAAAAACCATTTA+TGG | - | chr3.2:53307350-53307369 | None:intergenic | 20.0% |
| !! | ATTGTATTAGTAAATACCTT+AGG | - | chr3.2:53307096-53307115 | None:intergenic | 20.0% |
| !! | CCATTATTATATATTGTGTT+AGG | + | chr3.2:53305682-53305701 | MS.gene05630:intron | 20.0% |
| !! | CCTAACACAATATATAATAA+TGG | - | chr3.2:53305685-53305704 | None:intergenic | 20.0% |
| !! | CTTTATAAGAGTTTATAAAG+AGG | + | chr3.2:53306221-53306240 | MS.gene05630:intron | 20.0% |
| !! | GAGCAAATTAATATCATAAT+AGG | + | chr3.2:53306897-53306916 | MS.gene05630:intron | 20.0% |
| !! | TATAAGTAACTTATATTCCT+AGG | + | chr3.2:53306519-53306538 | MS.gene05630:intron | 20.0% |
| !! | TATATAATCTATTTCACACT+TGG | + | chr3.2:53305138-53305157 | MS.gene05630:CDS | 20.0% |
| !! | TTATTATATATTGTGTTAGG+GGG | + | chr3.2:53305685-53305704 | MS.gene05630:intron | 20.0% |
| !!! | ATTTCCATTTTGTTGAAATT+GGG | - | chr3.2:53306493-53306512 | None:intergenic | 20.0% |
| !!! | CTATTCTTTGAAGTTATTAT+TGG | + | chr3.2:53305946-53305965 | MS.gene05630:intron | 20.0% |
| !!! | GTTTTTTGCAATACATTTTA+GGG | - | chr3.2:53306173-53306192 | None:intergenic | 20.0% |
| ! | AAAAAAACATGACATCAGAA+TGG | - | chr3.2:53306842-53306861 | None:intergenic | 25.0% |
| ! | AAGATAAGAGAAATAGTCAA+CGG | - | chr3.2:53305202-53305221 | None:intergenic | 25.0% |
| ! | AGGGTAATTAAGAATAATCA+GGG | + | chr3.2:53306722-53306741 | MS.gene05630:intron | 25.0% |
| ! | CACATCATATATGATCTATA+AGG | - | chr3.2:53306024-53306043 | None:intergenic | 25.0% |
| ! | CTTGATGTGATTTATGTTAA+GGG | + | chr3.2:53305384-53305403 | MS.gene05630:CDS | 25.0% |
| ! | TAATAGTGTCAATGTTGTAT+CGG | + | chr3.2:53305977-53305996 | MS.gene05630:intron | 25.0% |
| ! | TGAATGGAAAATAATGTGTA+AGG | + | chr3.2:53307306-53307325 | MS.gene05630:intron | 25.0% |
| ! | TTGATATATTGCATGTTCAT+TGG | + | chr3.2:53307372-53307391 | MS.gene05630:intron | 25.0% |
| !! | GATTTCCATTTTGTTGAAAT+TGG | - | chr3.2:53306494-53306513 | None:intergenic | 25.0% |
| !! | TTTAACTTTCGAACCATAAA+TGG | + | chr3.2:53307334-53307353 | MS.gene05630:intron | 25.0% |
| !!! | ACTTTGTCACTATTTTTGTT+TGG | + | chr3.2:53305576-53305595 | MS.gene05630:CDS | 25.0% |
| !!! | CTTTGTCACTATTTTTGTTT+GGG | + | chr3.2:53305577-53305596 | MS.gene05630:CDS | 25.0% |
| !!! | GGTTTTTTGCAATACATTTT+AGG | - | chr3.2:53306174-53306193 | None:intergenic | 25.0% |
| !!! | TCTGATACCATTTTGAAATT+GGG | - | chr3.2:53306292-53306311 | None:intergenic | 25.0% |
| !!! | TTCTGATACCATTTTGAAAT+TGG | - | chr3.2:53306293-53306312 | None:intergenic | 25.0% |
| !!! | TTTGTCACTATTTTTGTTTG+GGG | + | chr3.2:53305578-53305597 | MS.gene05630:CDS | 25.0% |
| AAAAAACCAAAATCCCACAT+TGG | + | chr3.2:53306186-53306205 | MS.gene05630:intron | 30.0% | |
| AAAACATCCAAATCACACAT+TGG | + | chr3.2:53306388-53306407 | MS.gene05630:intron | 30.0% | |
| AAATCACACATTGGATAGAT+AGG | + | chr3.2:53306397-53306416 | MS.gene05630:intron | 30.0% | |
| AATAGTGTCAATGTTGTATC+GGG | + | chr3.2:53305978-53305997 | MS.gene05630:intron | 30.0% | |
| ACACACTCATTCTTCTTATT+TGG | - | chr3.2:53306928-53306947 | None:intergenic | 30.0% | |
| ACATAAATCACATCAAGCAA+TGG | - | chr3.2:53305381-53305400 | None:intergenic | 30.0% | |
| AGTATGTGATCCTTAGTATT+TGG | + | chr3.2:53306637-53306656 | MS.gene05630:intron | 30.0% | |
| ATACTAAGGATCACATACTT+AGG | - | chr3.2:53306636-53306655 | None:intergenic | 30.0% | |
| ATGTGAGTGTGAAAACTATT+AGG | + | chr3.2:53306047-53306066 | MS.gene05630:intron | 30.0% | |
| ATGTGATTTATGTTAAGGGT+GGG | + | chr3.2:53305388-53305407 | MS.gene05630:CDS | 30.0% | |
| CAATTGTAGGTAAATGGTTT+AGG | + | chr3.2:53307281-53307300 | MS.gene05630:intron | 30.0% | |
| CAGGGTAATTAAGAATAATC+AGG | + | chr3.2:53306721-53306740 | MS.gene05630:intron | 30.0% | |
| CTAAGCAATACCAAATACTA+AGG | - | chr3.2:53306650-53306669 | None:intergenic | 30.0% | |
| CTGATTATTCTTAATTACCC+TGG | - | chr3.2:53306723-53306742 | None:intergenic | 30.0% | |
| CTTAGTATTTGGTATTGCTT+AGG | + | chr3.2:53306648-53306667 | MS.gene05630:intron | 30.0% | |
| GCTTGATGTGATTTATGTTA+AGG | + | chr3.2:53305383-53305402 | MS.gene05630:CDS | 30.0% | |
| GTCTGACAAAAAATGAAACA+GGG | - | chr3.2:53305754-53305773 | None:intergenic | 30.0% | |
| TATAACGTGTTTGATCTTGT+TGG | + | chr3.2:53307841-53307860 | MS.gene05630:CDS | 30.0% | |
| TATCTATCCAATGTGTGATT+TGG | - | chr3.2:53306398-53306417 | None:intergenic | 30.0% | |
| TCATCGTAGTACTTCATAAT+GGG | - | chr3.2:53307601-53307620 | None:intergenic | 30.0% | |
| TCTTCATGAGAGTTATAATG+AGG | + | chr3.2:53306422-53306441 | MS.gene05630:intron | 30.0% | |
| TGTGATTATGTTCATATGCA+TGG | + | chr3.2:53307549-53307568 | MS.gene05630:CDS | 30.0% | |
| TTCATCGTAGTACTTCATAA+TGG | - | chr3.2:53307602-53307621 | None:intergenic | 30.0% | |
| ! | AAAAAGATCTTCAAGTTCCT+AGG | - | chr3.2:53306539-53306558 | None:intergenic | 30.0% |
| ! | ATGGATTATGTCTAATTGGT+CGG | - | chr3.2:53306823-53306842 | None:intergenic | 30.0% |
| ! | GTAAATGGTTTAGGATTGAA+TGG | + | chr3.2:53307290-53307309 | MS.gene05630:intron | 30.0% |
| ! | TCACATTTTTATTGTGTACC+CGG | + | chr3.2:53306562-53306581 | MS.gene05630:intron | 30.0% |
| ! | TCTTAAGCATTTTTCTGTTG+TGG | + | chr3.2:53306601-53306620 | MS.gene05630:intron | 30.0% |
| ! | TGTTAAGTGGATTCTTAGTT+TGG | + | chr3.2:53306792-53306811 | MS.gene05630:intron | 30.0% |
| ! | TGTTTGCTAGAAAAAGGTTT+GGG | - | chr3.2:53307212-53307231 | None:intergenic | 30.0% |
| ! | TTCTGAAGGTAAAAGAAGAA+TGG | - | chr3.2:53305070-53305089 | None:intergenic | 30.0% |
| !! | AAAAAGTACCAGAAGACAAA+TGG | + | chr3.2:53305106-53305125 | MS.gene05630:CDS | 30.0% |
| !! | CAGAATGGATTATGTCTAAT+TGG | - | chr3.2:53306827-53306846 | None:intergenic | 30.0% |
| !! | TTTGCAATACATTTTAGGGA+AGG | - | chr3.2:53306169-53306188 | None:intergenic | 30.0% |
| !!! | ACAATACTGACTTGTGTTTT+AGG | + | chr3.2:53308000-53308019 | MS.gene05630:CDS | 30.0% |
| !!! | CAATACTGACTTGTGTTTTA+GGG | + | chr3.2:53308001-53308020 | MS.gene05630:CDS | 30.0% |
| AAACATATCCAAGAAGAGTG+TGG | - | chr3.2:53306112-53306131 | None:intergenic | 35.0% | |
| AAATCATCATCACACTAGTC+AGG | - | chr3.2:53308041-53308060 | None:intergenic | 35.0% | |
| AAATCCCACATTGGATAGAT+AGG | + | chr3.2:53306195-53306214 | MS.gene05630:intron | 35.0% | |
| AACAGTTGAAGCTCATATCA+AGG | - | chr3.2:53307254-53307273 | None:intergenic | 35.0% | |
| AATCCCACATTGGATAGATA+GGG | + | chr3.2:53306196-53306215 | MS.gene05630:intron | 35.0% | |
| ACAAAAAATGAAACAGGGAC+GGG | - | chr3.2:53305749-53305768 | None:intergenic | 35.0% | |
| ACAAATCTCATGCTTATGTG+AGG | + | chr3.2:53305310-53305329 | MS.gene05630:CDS | 35.0% | |
| ACACGTTATAGCAAGTAACA+AGG | - | chr3.2:53307831-53307850 | None:intergenic | 35.0% | |
| ACTGATGCATTTGTATGCTA+GGG | - | chr3.2:53307132-53307151 | None:intergenic | 35.0% | |
| AGATACAATGTGTGTGTAAC+AGG | + | chr3.2:53306141-53306160 | MS.gene05630:intron | 35.0% | |
| AGGAAACTAGAGCAAAGATA+CGG | - | chr3.2:53305245-53305264 | None:intergenic | 35.0% | |
| AGTTAGGCCCAATTTCAAAA+TGG | + | chr3.2:53306282-53306301 | MS.gene05630:intron | 35.0% | |
| ATACTCTGATCATGTACCTA+AGG | + | chr3.2:53307077-53307096 | MS.gene05630:intron | 35.0% | |
| ATCAACTGTATGGAATACCA+TGG | + | chr3.2:53307684-53307703 | MS.gene05630:CDS | 35.0% | |
| ATCTATTTCACACTTGGCAT+CGG | + | chr3.2:53305144-53305163 | MS.gene05630:CDS | 35.0% | |
| CTAACTCATCCTTACAAAAC+TGG | - | chr3.2:53306268-53306287 | None:intergenic | 35.0% | |
| CTACGATGAACTAAAGATTC+AGG | + | chr3.2:53307612-53307631 | MS.gene05630:CDS | 35.0% | |
| CTTTCCTGAGGATATTACAA+AGG | + | chr3.2:53307462-53307481 | MS.gene05630:CDS | 35.0% | |
| GAATAATCAGGGACATGAAA+TGG | + | chr3.2:53306733-53306752 | MS.gene05630:intron | 35.0% | |
| GACAAAAAATGAAACAGGGA+CGG | - | chr3.2:53305750-53305769 | None:intergenic | 35.0% | |
| GAGAATGCAAAAATTGCTGT+AGG | + | chr3.2:53307892-53307911 | MS.gene05630:CDS | 35.0% | |
| GATGTGATTTATGTTAAGGG+TGG | + | chr3.2:53305387-53305406 | MS.gene05630:CDS | 35.0% | |
| GCATAAAGTTTATCGTGGAA+AGG | + | chr3.2:53307034-53307053 | MS.gene05630:intron | 35.0% | |
| GGTCTGACAAAAAATGAAAC+AGG | - | chr3.2:53305755-53305774 | None:intergenic | 35.0% | |
| GGTGCGTTTACATAAATTGT+GGG | - | chr3.2:53306332-53306351 | None:intergenic | 35.0% | |
| GTTTCACTCAGTAGTAATGA+GGG | - | chr3.2:53306958-53306977 | None:intergenic | 35.0% | |
| TACTGATGCATTTGTATGCT+AGG | - | chr3.2:53307133-53307152 | None:intergenic | 35.0% | |
| TAGCAAGTAACAAGGAGAAT+TGG | - | chr3.2:53307823-53307842 | None:intergenic | 35.0% | |
| TAGCAGCAATTGTAGGTAAA+TGG | + | chr3.2:53307275-53307294 | MS.gene05630:intron | 35.0% | |
| TAGGCCCAATTTCAACAAAA+TGG | + | chr3.2:53306486-53306505 | MS.gene05630:intron | 35.0% | |
| TATTCATTGAAACCACCAGT+TGG | + | chr3.2:53307161-53307180 | MS.gene05630:intron | 35.0% | |
| TCAACTGTATGGAATACCAT+GGG | + | chr3.2:53307685-53307704 | MS.gene05630:CDS | 35.0% | |
| TCACATAAGCATGAGATTTG+TGG | - | chr3.2:53305311-53305330 | None:intergenic | 35.0% | |
| TGAAGGTAAAAGAAGAATGG+TGG | - | chr3.2:53305067-53305086 | None:intergenic | 35.0% | |
| TGGTATCAGAACCTATAGAT+CGG | + | chr3.2:53306302-53306321 | MS.gene05630:intron | 35.0% | |
| TGGTGCGTTTACATAAATTG+TGG | - | chr3.2:53306333-53306352 | None:intergenic | 35.0% | |
| TGTGATTTATGTTAAGGGTG+GGG | + | chr3.2:53305389-53305408 | MS.gene05630:CDS | 35.0% | |
| TGTTTCACTCAGTAGTAATG+AGG | - | chr3.2:53306959-53306978 | None:intergenic | 35.0% | |
| TTTCACTCAGTAGTAATGAG+GGG | - | chr3.2:53306957-53306976 | None:intergenic | 35.0% | |
| ! | AGAAGTTTCCAAGATTTTGC+CGG | - | chr3.2:53306584-53306603 | None:intergenic | 35.0% |
| ! | AGAGATTTGAACTCTTTTGC+AGG | - | chr3.2:53307513-53307532 | None:intergenic | 35.0% |
| ! | AGTTGGTACATTCCAGTAAA+GGG | + | chr3.2:53307178-53307197 | MS.gene05630:intron | 35.0% |
| ! | ATAAGGCACCAACACAAAAA+CGG | - | chr3.2:53306007-53306026 | None:intergenic | 35.0% |
| ! | ATCTATCCAATGTGGGATTT+TGG | - | chr3.2:53306195-53306214 | None:intergenic | 35.0% |
| ! | CAATTTTTGCATTCTCTAGG+AGG | - | chr3.2:53307888-53307907 | None:intergenic | 35.0% |
| ! | CAGCAATTTTTGCATTCTCT+AGG | - | chr3.2:53307891-53307910 | None:intergenic | 35.0% |
| ! | CATTCTGAGTTGAAACATTG+TGG | + | chr3.2:53306761-53306780 | MS.gene05630:intron | 35.0% |
| ! | CTGTTTGCTAGAAAAAGGTT+TGG | - | chr3.2:53307213-53307232 | None:intergenic | 35.0% |
| ! | GTATCGACACTTTAGATTGA+AGG | + | chr3.2:53305842-53305861 | MS.gene05630:intron | 35.0% |
| ! | GTTTGCTAGAAAAAGGTTTG+GGG | - | chr3.2:53307211-53307230 | None:intergenic | 35.0% |
| ! | TGCTGCAACTTTACAGTTTT+AGG | - | chr3.2:53308069-53308088 | None:intergenic | 35.0% |
| ! | TGTCTCTGTTTGCTAGAAAA+AGG | - | chr3.2:53307218-53307237 | None:intergenic | 35.0% |
| ! | TTTTACCTTCAGAAGCTTCA+GGG | + | chr3.2:53305076-53305095 | MS.gene05630:CDS | 35.0% |
| !! | AAAGTGTCGATACACAAAGT+AGG | - | chr3.2:53305835-53305854 | None:intergenic | 35.0% |
| !! | AAGTGTCGATACACAAAGTA+GGG | - | chr3.2:53305834-53305853 | None:intergenic | 35.0% |
| !! | ATGTTCATTGGTCTTTGGAA+AGG | + | chr3.2:53307384-53307403 | MS.gene05630:intron | 35.0% |
| !! | ATTGCATGTTCATTGGTCTT+TGG | + | chr3.2:53307379-53307398 | MS.gene05630:intron | 35.0% |
| !! | ATTGTTTTTCCCTCTCTTCT+TGG | + | chr3.2:53307933-53307952 | MS.gene05630:CDS | 35.0% |
| !! | CAGTTTTGTAAGGATGAGTT+AGG | + | chr3.2:53306266-53306285 | MS.gene05630:intron | 35.0% |
| !! | GTCTATCATCTCTTGGTTTT+GGG | + | chr3.2:53308146-53308165 | MS.gene05630:CDS | 35.0% |
| !! | TTGTTTTTCCCTCTCTTCTT+GGG | + | chr3.2:53307934-53307953 | MS.gene05630:CDS | 35.0% |
| !!! | ACTGTTTTAGCAGCAATTGT+AGG | + | chr3.2:53307268-53307287 | MS.gene05630:intron | 35.0% |
| !!! | CACATGCATCGTTTTTTTGT+CGG | - | chr3.2:53305906-53305925 | None:intergenic | 35.0% |
| !!! | TGTGTTTTAGGGCTTACAAA+TGG | + | chr3.2:53308012-53308031 | MS.gene05630:CDS | 35.0% |
| AAAGCATAGATGTCCTCTGA+AGG | + | chr3.2:53307009-53307028 | MS.gene05630:intron | 40.0% | |
| AACAGTTACAAGACCTCGTT+GGG | + | chr3.2:53305798-53305817 | MS.gene05630:intron | 40.0% | |
| AACGACAATTGTCCTTTGAC+TGG | + | chr3.2:53307649-53307668 | MS.gene05630:CDS | 40.0% | |
| AAGAAGAATGAGTGTGTGCA+AGG | + | chr3.2:53306931-53306950 | MS.gene05630:intron | 40.0% | |
| AAGCATAGATGTCCTCTGAA+GGG | + | chr3.2:53307010-53307029 | MS.gene05630:intron | 40.0% | |
| ACAATCAAGTGGTATGGCTT+TGG | + | chr3.2:53307709-53307728 | MS.gene05630:CDS | 40.0% | |
| ACACAAGTCAGTATTGTGAC+AGG | - | chr3.2:53307997-53308016 | None:intergenic | 40.0% | |
| ACAGCCTTTGTAATATCCTC+AGG | - | chr3.2:53307469-53307488 | None:intergenic | 40.0% | |
| ATACCAATCCCTAAGACGTT+GGG | - | chr3.2:53307800-53307819 | None:intergenic | 40.0% | |
| ATACCACTTGATTGTTCCCA+TGG | - | chr3.2:53307704-53307723 | None:intergenic | 40.0% | |
| ATACCATGGGAACAATCAAG+TGG | + | chr3.2:53307698-53307717 | MS.gene05630:CDS | 40.0% | |
| ATGGGAACAATCAAGTGGTA+TGG | + | chr3.2:53307703-53307722 | MS.gene05630:CDS | 40.0% | |
| ATTTATGTTAAGGGTGGGGT+TGG | + | chr3.2:53305393-53305412 | MS.gene05630:CDS | 40.0% | |
| ATTTCCTGGTTTCATTACCG+AGG | + | chr3.2:53307765-53307784 | MS.gene05630:CDS | 40.0% | |
| CAAAAAAACGATGCATGTGG+TGG | + | chr3.2:53305907-53305926 | MS.gene05630:intron | 40.0% | |
| CATAAGCATGAGATTTGTGG+CGG | - | chr3.2:53305308-53305327 | None:intergenic | 40.0% | |
| CCTTACAAAACTGGCTAGTA+AGG | - | chr3.2:53306259-53306278 | None:intergenic | 40.0% | |
| CCTTAGAAAACCGTCTTGTA+AGG | - | chr3.2:53306460-53306479 | None:intergenic | 40.0% | |
| CGACAAAAAAACGATGCATG+TGG | + | chr3.2:53305904-53305923 | MS.gene05630:intron | 40.0% | |
| CTTTACTGGAATGTACCAAC+TGG | - | chr3.2:53307179-53307198 | None:intergenic | 40.0% | |
| GCGTTTACATAAATTGTGGG+TGG | - | chr3.2:53306329-53306348 | None:intergenic | 40.0% | |
| GCTTATGTGAGGATCAATGT+TGG | + | chr3.2:53305321-53305340 | MS.gene05630:CDS | 40.0% | |
| GGTCTACAAAGGACATGTTA+GGG | + | chr3.2:53305706-53305725 | MS.gene05630:intron | 40.0% | |
| GTGACACTTGCAATATTTCC+TGG | + | chr3.2:53307751-53307770 | MS.gene05630:CDS | 40.0% | |
| TGAACTAAAGATTCAGGCAG+TGG | + | chr3.2:53307618-53307637 | MS.gene05630:CDS | 40.0% | |
| TGCACAGTCCAAAATTCTTC+CGG | + | chr3.2:53307962-53307981 | MS.gene05630:CDS | 40.0% | |
| TGGGTTCTATGTTACTGTTG+CGG | + | chr3.2:53305425-53305444 | MS.gene05630:CDS | 40.0% | |
| TGTGGTTTCTGTCTGTTAAG+TGG | + | chr3.2:53306779-53306798 | MS.gene05630:intron | 40.0% | |
| TTTATGTTAAGGGTGGGGTT+GGG | + | chr3.2:53305394-53305413 | MS.gene05630:CDS | 40.0% | |
| ! | ATCTCTGTCCGGAAGAATTT+TGG | - | chr3.2:53307973-53307992 | None:intergenic | 40.0% |
| ! | ATTGAAGGAGCGTATGTTGT+GGG | + | chr3.2:53305857-53305876 | MS.gene05630:intron | 40.0% |
| ! | ATTTGAACTCTTTTGCAGGC+TGG | - | chr3.2:53307509-53307528 | None:intergenic | 40.0% |
| ! | CAGTTGGTACATTCCAGTAA+AGG | + | chr3.2:53307177-53307196 | MS.gene05630:intron | 40.0% |
| ! | CCTTACAAGACGGTTTTCTA+AGG | + | chr3.2:53306457-53306476 | MS.gene05630:intron | 40.0% |
| ! | CTTTTACCTTCAGAAGCTTC+AGG | + | chr3.2:53305075-53305094 | MS.gene05630:CDS | 40.0% |
| ! | GAAGTTTCCAAGATTTTGCC+GGG | - | chr3.2:53306583-53306602 | None:intergenic | 40.0% |
| ! | GGATTCTTGTTTCTTTCCTG+AGG | + | chr3.2:53307450-53307469 | MS.gene05630:CDS | 40.0% |
| ! | GGTCTATCATCTCTTGGTTT+TGG | + | chr3.2:53308145-53308164 | MS.gene05630:CDS | 40.0% |
| !! | ACTAAGTGCCATTTGTCTTC+TGG | - | chr3.2:53305117-53305136 | None:intergenic | 40.0% |
| !! | AGCGTGTTGTTCTTAGCTTT+TGG | + | chr3.2:53308111-53308130 | MS.gene05630:CDS | 40.0% |
| !! | AGTGTCGATACACAAAGTAG+GGG | - | chr3.2:53305833-53305852 | None:intergenic | 40.0% |
| !! | CCTTACTAGCCAGTTTTGTA+AGG | + | chr3.2:53306256-53306275 | MS.gene05630:intron | 40.0% |
| !! | CGGTTTTCTAAGGATGAGTT+AGG | + | chr3.2:53306467-53306486 | MS.gene05630:intron | 40.0% |
| !! | GTTGTTCTTAGCTTTTGGTC+TGG | + | chr3.2:53308116-53308135 | MS.gene05630:CDS | 40.0% |
| AAACTTTATGCCCCCTTCAG+AGG | - | chr3.2:53307025-53307044 | None:intergenic | 45.0% | |
| ACACTCCTCTCCTTACAAGA+CGG | + | chr3.2:53306447-53306466 | MS.gene05630:intron | 45.0% | |
| ACATCCTCGGTAATGAAACC+AGG | - | chr3.2:53307772-53307791 | None:intergenic | 45.0% | |
| ACCAACAAGACTAGATAGCG+AGG | - | chr3.2:53305265-53305284 | None:intergenic | 45.0% | |
| AGTGCCCTATCTATCCAATG+TGG | - | chr3.2:53306203-53306222 | None:intergenic | 45.0% | |
| AGTGTCAATGTTGTATCGGG+TGG | + | chr3.2:53305981-53306000 | MS.gene05630:intron | 45.0% | |
| ATTTCCAGCCACACTCTTCT+TGG | + | chr3.2:53306101-53306120 | MS.gene05630:intron | 45.0% | |
| CAAAACTGGCTAGTAAGGAG+AGG | - | chr3.2:53306254-53306273 | None:intergenic | 45.0% | |
| CATGAGATTTGTGGCGGTTA+AGG | - | chr3.2:53305302-53305321 | None:intergenic | 45.0% | |
| CTACAAAGGACATGTTAGGG+CGG | + | chr3.2:53305709-53305728 | MS.gene05630:intron | 45.0% | |
| CTGTCTGGAGATCAACTGTA+TGG | + | chr3.2:53307674-53307693 | MS.gene05630:CDS | 45.0% | |
| CTGTGATGAATGCGTTCCAT+GGG | - | chr3.2:53305179-53305198 | None:intergenic | 45.0% | |
| GAAAACCGTCTTGTAAGGAG+AGG | - | chr3.2:53306455-53306474 | None:intergenic | 45.0% | |
| GAACAGTTACAAGACCTCGT+TGG | + | chr3.2:53305797-53305816 | MS.gene05630:intron | 45.0% | |
| GATACCAATCCCTAAGACGT+TGG | - | chr3.2:53307801-53307820 | None:intergenic | 45.0% | |
| GGGTCTACAAAGGACATGTT+AGG | + | chr3.2:53305705-53305724 | MS.gene05630:intron | 45.0% | |
| GTGCCCTATCTATCCAATGT+GGG | - | chr3.2:53306202-53306221 | None:intergenic | 45.0% | |
| GTTCTATGTTACTGTTGCGG+CGG | + | chr3.2:53305428-53305447 | MS.gene05630:CDS | 45.0% | |
| TACAAAGGACATGTTAGGGC+GGG | + | chr3.2:53305710-53305729 | MS.gene05630:intron | 45.0% | |
| TACTGGAATGTACCAACTGG+TGG | - | chr3.2:53307176-53307195 | None:intergenic | 45.0% | |
| TGGTGCAGGGATCTATTCTT+GGG | + | chr3.2:53305478-53305497 | MS.gene05630:CDS | 45.0% | |
| TGTTGTGGGACATGTGTTGA+TGG | + | chr3.2:53305871-53305890 | MS.gene05630:intron | 45.0% | |
| TTCTGGTGTGGCTAATGCTT+TGG | + | chr3.2:53305458-53305477 | MS.gene05630:CDS | 45.0% | |
| TTGGTGCAGGGATCTATTCT+TGG | + | chr3.2:53305477-53305496 | MS.gene05630:CDS | 45.0% | |
| TTGTGACAGGAATCTCTGTC+CGG | - | chr3.2:53307984-53308003 | None:intergenic | 45.0% | |
| TTGTGTACCCGGCAAAATCT+TGG | + | chr3.2:53306573-53306592 | MS.gene05630:intron | 45.0% | |
| TTGTGTTAGGGGGTCTACAA+AGG | + | chr3.2:53305695-53305714 | MS.gene05630:intron | 45.0% | |
| TTTGTCCCTGAAGCTTCTGA+AGG | - | chr3.2:53305084-53305103 | None:intergenic | 45.0% | |
| ! | AAATGAAACAGGGACGGGTT+CGG | - | chr3.2:53305744-53305763 | None:intergenic | 45.0% |
| ! | AGCATAGATGTCCTCTGAAG+GGG | + | chr3.2:53307011-53307030 | MS.gene05630:intron | 45.0% |
| ! | AGGGGGCATAAAGTTTATCG+TGG | + | chr3.2:53307029-53307048 | MS.gene05630:intron | 45.0% |
| ! | ATATCCAAGAAGAGTGTGGC+TGG | - | chr3.2:53306108-53306127 | None:intergenic | 45.0% |
| ! | GATTGAAGGAGCGTATGTTG+TGG | + | chr3.2:53305856-53305875 | MS.gene05630:intron | 45.0% |
| ! | GCATTTTTCTGTTGTGGCTG+CGG | + | chr3.2:53306607-53306626 | MS.gene05630:intron | 45.0% |
| ! | GTGGGGTTGGGTTGTATAAT+GGG | + | chr3.2:53305406-53305425 | MS.gene05630:CDS | 45.0% |
| ! | TGTTGGTAAATCCCTGACTG+CGG | + | chr3.2:53307858-53307877 | MS.gene05630:CDS | 45.0% |
| !! | TCCTCGCTATCTAGTCTTGT+TGG | + | chr3.2:53305261-53305280 | MS.gene05630:CDS | 45.0% |
| AAAGATTCAGGCAGTGGCTG+TGG | + | chr3.2:53307624-53307643 | MS.gene05630:CDS | 50.0% | |
| AATCCCTAAGACGTTGGGAG+TGG | - | chr3.2:53307795-53307814 | None:intergenic | 50.0% | |
| ACACCCAACACTATTGGGCT+TGG | - | chr3.2:53306353-53306372 | None:intergenic | 50.0% | |
| ACACGCAGGCTGTCATTGTT+GGG | + | chr3.2:53305526-53305545 | MS.gene05630:CDS | 50.0% | |
| ACTCCCAACGTCTTAGGGAT+TGG | + | chr3.2:53307794-53307813 | MS.gene05630:CDS | 50.0% | |
| AGACCCAACCCATTGCATTC+GGG | + | chr3.2:53305770-53305789 | MS.gene05630:intron | 50.0% | |
| ATACGGTCAACGCTAGCATG+AGG | - | chr3.2:53305228-53305247 | None:intergenic | 50.0% | |
| ATGTCCACTCCCAACGTCTT+AGG | + | chr3.2:53307788-53307807 | MS.gene05630:CDS | 50.0% | |
| CAGACCCAACCCATTGCATT+CGG | + | chr3.2:53305769-53305788 | MS.gene05630:intron | 50.0% | |
| CGCTCACACCCAACACTATT+GGG | - | chr3.2:53306358-53306377 | None:intergenic | 50.0% | |
| CTCCAGACAGATCCAGTCAA+AGG | - | chr3.2:53307664-53307683 | None:intergenic | 50.0% | |
| CTGCTGGGTCTATCATCTCT+TGG | + | chr3.2:53308139-53308158 | MS.gene05630:CDS | 50.0% | |
| GCAAGCATCCCAAGAAGAGA+GGG | - | chr3.2:53307945-53307964 | None:intergenic | 50.0% | |
| GCACCAAGCCCAATAGTGTT+GGG | + | chr3.2:53306347-53306366 | MS.gene05630:intron | 50.0% | |
| GCTGTGATGAATGCGTTCCA+TGG | - | chr3.2:53305180-53305199 | None:intergenic | 50.0% | |
| GGATCTATTCTTGGGTCTGC+CGG | + | chr3.2:53305486-53305505 | MS.gene05630:CDS | 50.0% | |
| GTCCTTTGACTGGATCTGTC+TGG | + | chr3.2:53307659-53307678 | MS.gene05630:CDS | 50.0% | |
| GTTCCCAACCCGAATGCAAT+GGG | - | chr3.2:53305781-53305800 | None:intergenic | 50.0% | |
| TACACGCAGGCTGTCATTGT+TGG | + | chr3.2:53305525-53305544 | MS.gene05630:CDS | 50.0% | |
| TACGGTCAACGCTAGCATGA+GGG | - | chr3.2:53305227-53305246 | None:intergenic | 50.0% | |
| TGCAAGCATCCCAAGAAGAG+AGG | - | chr3.2:53307946-53307965 | None:intergenic | 50.0% | |
| TGTCCACTCCCAACGTCTTA+GGG | + | chr3.2:53307789-53307808 | MS.gene05630:CDS | 50.0% | |
| TGTTCCCAACCCGAATGCAA+TGG | - | chr3.2:53305782-53305801 | None:intergenic | 50.0% | |
| TTGTGGGTGGTCCGATCTAT+AGG | - | chr3.2:53306316-53306335 | None:intergenic | 50.0% | |
| ! | AATGAAACAGGGACGGGTTC+GGG | - | chr3.2:53305743-53305762 | None:intergenic | 50.0% |
| ! | CAACCCATTGCATTCGGGTT+GGG | + | chr3.2:53305775-53305794 | MS.gene05630:intron | 50.0% |
| ! | CAACCCGAATGCAATGGGTT+GGG | - | chr3.2:53305776-53305795 | None:intergenic | 50.0% |
| ! | CAATAGTGTTGGGTGTGAGC+GGG | + | chr3.2:53306357-53306376 | MS.gene05630:intron | 50.0% |
| ! | CCAATAGTGTTGGGTGTGAG+CGG | + | chr3.2:53306356-53306375 | MS.gene05630:intron | 50.0% |
| ! | GCATAGATGTCCTCTGAAGG+GGG | + | chr3.2:53307012-53307031 | MS.gene05630:intron | 50.0% |
| ! | GGTGGGGTTGGGTTGTATAA+TGG | + | chr3.2:53305405-53305424 | MS.gene05630:CDS | 50.0% |
| ! | GTGGCTAATGCTTTGGTGCA+GGG | + | chr3.2:53305465-53305484 | MS.gene05630:CDS | 50.0% |
| ! | TAGCTTTTGGTCTGGCTGCT+GGG | + | chr3.2:53308124-53308143 | MS.gene05630:CDS | 50.0% |
| ! | TAGGAGGTATACCGCAGTCA+GGG | - | chr3.2:53307872-53307891 | None:intergenic | 50.0% |
| ! | TGAACTCTTTTGCAGGCTGG+AGG | - | chr3.2:53307506-53307525 | None:intergenic | 50.0% |
| ! | TGTGGCTAATGCTTTGGTGC+AGG | + | chr3.2:53305464-53305483 | MS.gene05630:CDS | 50.0% |
| !! | ATTGTTGGGAGTGCTGCTTC+TGG | + | chr3.2:53305540-53305559 | MS.gene05630:CDS | 50.0% |
| !! | GCATCGGTTACTTGTTCCCA+TGG | + | chr3.2:53305160-53305179 | MS.gene05630:CDS | 50.0% |
| !! | TTAGCTTTTGGTCTGGCTGC+TGG | + | chr3.2:53308123-53308142 | MS.gene05630:CDS | 50.0% |
| ACGTTGGGAGTGGACATCCT+CGG | - | chr3.2:53307785-53307804 | None:intergenic | 55.0% | |
| CCAACCCATTGCATTCGGGT+TGG | + | chr3.2:53305774-53305793 | MS.gene05630:intron | 55.0% | |
| CCAACCCGAATGCAATGGGT+TGG | - | chr3.2:53305777-53305796 | None:intergenic | 55.0% | |
| CCGCTCACACCCAACACTAT+TGG | - | chr3.2:53306359-53306378 | None:intergenic | 55.0% | |
| CGCACCAAGCCCAATAGTGT+TGG | + | chr3.2:53306346-53306365 | MS.gene05630:intron | 55.0% | |
| TGCAGCATGCAGAGACTGCA+GGG | + | chr3.2:53308082-53308101 | MS.gene05630:CDS | 55.0% | |
| TGGGGCACATGTCCCTTTAC+TGG | - | chr3.2:53307193-53307212 | None:intergenic | 55.0% | |
| TGTTACTGTTGCGGCGGTTG+TGG | + | chr3.2:53305434-53305453 | MS.gene05630:CDS | 55.0% | |
| TTGCAGCATGCAGAGACTGC+AGG | + | chr3.2:53308081-53308100 | MS.gene05630:CDS | 55.0% | |
| TTGGGTGTGAGCGGGTGTAT+TGG | + | chr3.2:53306365-53306384 | MS.gene05630:intron | 55.0% | |
| ! | CTAGGAGGTATACCGCAGTC+AGG | - | chr3.2:53307873-53307892 | None:intergenic | 55.0% |
| !!! | TCGGGTGGCCGTTTTTGTGT+TGG | + | chr3.2:53305996-53306015 | MS.gene05630:intron | 55.0% |
| ACAGCCTGCGTGTACCTCTC+CGG | - | chr3.2:53305519-53305538 | None:intergenic | 60.0% | |
| GGGGTGTACAGAACCCAACG+AGG | - | chr3.2:53305814-53305833 | None:intergenic | 60.0% | |
| GTACCTCTCCGGCAACTCAC+CGG | - | chr3.2:53305508-53305527 | None:intergenic | 60.0% | |
| GTTGCGGCGGTTGTGGTTTC+TGG | + | chr3.2:53305441-53305460 | MS.gene05630:CDS | 60.0% | |
| !! | GGCGGTTGTGGTTTCTGGTG+TGG | + | chr3.2:53305446-53305465 | MS.gene05630:CDS | 60.0% |
| TGGGTCTGCCGGTGAGTTGC+CGG | + | chr3.2:53305497-53305516 | MS.gene05630:CDS | 65.0% | |
| ! | GTTGCCGGAGAGGTACACGC+AGG | + | chr3.2:53305512-53305531 | MS.gene05630:CDS | 65.0% |
| CTGCCGGTGAGTTGCCGGAG+AGG | + | chr3.2:53305502-53305521 | MS.gene05630:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 53305024 | 53308176 | 53305024 | ID=MS.gene05630 |
| chr3.2 | mRNA | 53305024 | 53308176 | 53305024 | ID=MS.gene05630.t1;Parent=MS.gene05630 |
| chr3.2 | exon | 53305024 | 53305610 | 53305024 | ID=MS.gene05630.t1.exon1;Parent=MS.gene05630.t1 |
| chr3.2 | CDS | 53305024 | 53305610 | 53305024 | ID=cds.MS.gene05630.t1;Parent=MS.gene05630.t1 |
| chr3.2 | exon | 53307450 | 53308176 | 53307450 | ID=MS.gene05630.t1.exon2;Parent=MS.gene05630.t1 |
| chr3.2 | CDS | 53307450 | 53308176 | 53307450 | ID=cds.MS.gene05630.t1;Parent=MS.gene05630.t1 |
| Gene Sequence |
| Protein sequence |
