Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056784.t1 | AFK34649.1 | 68.9 | 122 | 26 | 3 | 61 | 175 | 19 | 135 | 2.50E-35 | 158.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056784.t1 | Q94BR4 | 64.4 | 59 | 20 | 1 | 39 | 97 | 198 | 255 | 4.2e-15 | 82.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056784.t1 | I3S307 | 68.9 | 122 | 26 | 3 | 61 | 175 | 19 | 135 | 1.8e-35 | 158.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056784 | MS.gene064070 | 0.825641 | 4.20E-54 | -1.69E-46 |
| MS.gene056784 | MS.gene22091 | 0.812107 | 5.01E-51 | -1.69E-46 |
| MS.gene056784 | MS.gene28659 | 0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene056784 | MS.gene75031 | 0.805747 | 1.15E-49 | -1.69E-46 |
| MS.gene056784 | MS.gene82879 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene056784 | MS.gene97022 | 0.806738 | 7.11E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056784.t1 | MTR_2g021040 | 68.852 | 122 | 26 | 3 | 61 | 175 | 19 | 135 | 8.23e-49 | 159 |
| MS.gene056784.t1 | MTR_2g021040 | 68.852 | 122 | 26 | 3 | 61 | 175 | 19 | 135 | 2.44e-48 | 159 |
| MS.gene056784.t1 | MTR_2g021040 | 68.852 | 122 | 26 | 3 | 61 | 175 | 19 | 135 | 4.87e-48 | 159 |
| MS.gene056784.t1 | MTR_0003s0650 | 74.390 | 82 | 18 | 3 | 95 | 174 | 53 | 133 | 1.04e-32 | 119 |
| MS.gene056784.t1 | MTR_1g044720 | 86.207 | 58 | 7 | 1 | 40 | 97 | 199 | 255 | 1.55e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056784.t1 | AT5G18940 | 67.568 | 74 | 24 | 0 | 101 | 174 | 61 | 134 | 1.89e-29 | 110 |
| MS.gene056784.t1 | AT5G18940 | 67.568 | 74 | 24 | 0 | 101 | 174 | 61 | 134 | 1.97e-29 | 110 |
| MS.gene056784.t1 | AT1G04510 | 64.407 | 59 | 20 | 1 | 39 | 97 | 198 | 255 | 2.82e-19 | 84.7 |
| MS.gene056784.t1 | AT1G04510 | 64.407 | 59 | 20 | 1 | 39 | 97 | 198 | 255 | 2.82e-19 | 84.7 |
| MS.gene056784.t1 | AT2G33340 | 64.407 | 59 | 20 | 1 | 39 | 97 | 198 | 255 | 1.17e-18 | 82.8 |
| MS.gene056784.t1 | AT2G33340 | 64.407 | 59 | 20 | 1 | 39 | 97 | 198 | 255 | 1.30e-18 | 82.8 |
| MS.gene056784.t1 | AT2G33340 | 64.407 | 59 | 20 | 1 | 39 | 97 | 198 | 255 | 1.30e-18 | 82.8 |
Find 41 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGTGAAGCCACCGGTAAT+TGG | 0.264537 | 8.4:+66329291 | None:intergenic |
| TCTTGATATCCTTCATTCTA+AGG | 0.302903 | 8.4:-66328178 | MS.gene056784:intron |
| CTCGAATTGCAGGATATATA+TGG | 0.350220 | 8.4:-66327856 | MS.gene056784:intron |
| TAGTGAAGCCACCGGTAATT+GGG | 0.360286 | 8.4:+66329292 | None:intergenic |
| ATTCACAAGTTGCCTATACT+TGG | 0.363293 | 8.4:-66327757 | MS.gene056784:CDS |
| CTTAAACAAAACTAGCAAAC+AGG | 0.402528 | 8.4:-66328211 | MS.gene056784:CDS |
| TTACAGGACATAATTGCAAC+TGG | 0.429954 | 8.4:-66327974 | MS.gene056784:intron |
| TGTGAAACCTGATCTAAATT+CGG | 0.430120 | 8.4:+66327823 | None:intergenic |
| CTCTTCGTCTCCCCAATTAC+CGG | 0.435283 | 8.4:-66329303 | MS.gene056784:CDS |
| TTCGTCTCCTCCCACACGCC+TGG | 0.436320 | 8.4:-66329369 | MS.gene056784:CDS |
| ATCAGAACCGAATTTAGATC+AGG | 0.437545 | 8.4:-66327830 | MS.gene056784:CDS |
| GACGATATTGTTGAAACAAA+AGG | 0.442977 | 8.4:-66327617 | MS.gene056784:CDS |
| GTATTCTACACAGCAATCAT+TGG | 0.448420 | 8.4:+66327588 | None:intergenic |
| CTTACTTCCCATCCAAGTAT+AGG | 0.450135 | 8.4:+66327745 | None:intergenic |
| TGTCTCTGTTATTGATTATG+TGG | 0.478498 | 8.4:-66329254 | MS.gene056784:CDS |
| TACTAGACTTTCTTGTTGCA+TGG | 0.494982 | 8.4:-66327546 | MS.gene056784:CDS |
| TGTGGGAGGAGACGAAGCAT+GGG | 0.496170 | 8.4:+66329376 | None:intergenic |
| GTGTGGGAGGAGACGAAGCA+TGG | 0.497993 | 8.4:+66329375 | None:intergenic |
| ACAAGTTGCCTATACTTGGA+TGG | 0.498032 | 8.4:-66327753 | MS.gene056784:CDS |
| AAAGTAATACCTTAGAATGA+AGG | 0.500411 | 8.4:+66328169 | None:intergenic |
| GAAAGGATTTAGTCCACTGT+TGG | 0.511448 | 8.4:-66327639 | MS.gene056784:CDS |
| CAAGTTGCCTATACTTGGAT+GGG | 0.523597 | 8.4:-66327752 | MS.gene056784:CDS |
| AGATCAGGTTTCACAGCTTG+TGG | 0.526178 | 8.4:-66327815 | MS.gene056784:CDS |
| TGACGGCACCGCCAGGCGTG+TGG | 0.531749 | 8.4:+66329358 | None:intergenic |
| GTAGCTAATACCTGTCCTGA+TGG | 0.554758 | 8.4:+66327917 | None:intergenic |
| TCTGTTATTGATTATGTGGA+AGG | 0.556841 | 8.4:-66329250 | MS.gene056784:intron |
| GAGAACGTGACGGCACCGCC+AGG | 0.561330 | 8.4:+66329351 | None:intergenic |
| GACGGCACCGCCAGGCGTGT+GGG | 0.562552 | 8.4:+66329359 | None:intergenic |
| GGCACCGCCAGGCGTGTGGG+AGG | 0.589473 | 8.4:+66329362 | None:intergenic |
| AGTGAAGCCACCGGTAATTG+GGG | 0.592971 | 8.4:+66329293 | None:intergenic |
| TTCGTCTCCCCAATTACCGG+TGG | 0.597618 | 8.4:-66329300 | MS.gene056784:CDS |
| TCAGGTTTCACAGCTTGTGG+AGG | 0.621980 | 8.4:-66327812 | MS.gene056784:CDS |
| CTAATACCTGTCCTGATGGA+CGG | 0.631552 | 8.4:+66327921 | None:intergenic |
| GTCTCCTCCCACACGCCTGG+CGG | 0.638274 | 8.4:-66329366 | MS.gene056784:CDS |
| CGTTCTCTTACTGTCGTCGT+CGG | 0.639136 | 8.4:-66329335 | MS.gene056784:CDS |
| GCTTGTGGAGGAAATCTGCA+AGG | 0.666944 | 8.4:-66327800 | MS.gene056784:CDS |
| GACAAAGATAGTGAAGCCAC+CGG | 0.677526 | 8.4:+66329284 | None:intergenic |
| TTAAACAAAACTAGCAAACA+GGG | 0.680512 | 8.4:-66328210 | MS.gene056784:CDS |
| TCAACAATATCGTCCAACAG+TGG | 0.704888 | 8.4:+66327626 | None:intergenic |
| ACGACAGTAAGAGAACGTGA+CGG | 0.738967 | 8.4:+66329341 | None:intergenic |
| TGTGGAGGAAATCTGCAAGG+AGG | 0.743747 | 8.4:-66327797 | MS.gene056784:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAAAATTAGTGTTTA+GGG | + | chr8.4:66327870-66327889 | None:intergenic | 10.0% |
| !!! | TAATTTTAAAATTAGTGTTT+AGG | + | chr8.4:66327871-66327890 | None:intergenic | 10.0% |
| !!! | TCAAAACTAATTTTTAATTT+TGG | + | chr8.4:66327899-66327918 | None:intergenic | 10.0% |
| !! | AAAATGATCTATTTAACAAA+AGG | + | chr8.4:66328221-66328240 | None:intergenic | 15.0% |
| !! | TAATATACAATTACATACAA+TGG | + | chr8.4:66328540-66328559 | None:intergenic | 15.0% |
| !!! | AGCGAAATATTTTTTAATTA+AGG | - | chr8.4:66328793-66328812 | MS.gene056784:intron | 15.0% |
| !!! | TTTTGTTAAATAGATCATTT+TGG | - | chr8.4:66328220-66328239 | MS.gene056784:CDS | 15.0% |
| !! | AAAGTAATACCTTAGAATAA+AGG | + | chr8.4:66328837-66328856 | None:intergenic | 20.0% |
| !!! | TGTTTGTCTAAAATCTAATT+TGG | - | chr8.4:66328046-66328065 | MS.gene056784:intron | 20.0% |
| ! | AAAGTAATACCTTAGAATGA+AGG | + | chr8.4:66328750-66328769 | None:intergenic | 25.0% |
| ! | AAGCTAAGAAATTATAGATG+AGG | + | chr8.4:66328006-66328025 | None:intergenic | 25.0% |
| ! | AATACAAAGAAACCAAAAAC+TGG | + | chr8.4:66328310-66328329 | None:intergenic | 25.0% |
| ! | TCTTGATATCCTTTATTCTA+AGG | - | chr8.4:66328825-66328844 | MS.gene056784:intron | 25.0% |
| ! | TTAAACAAAACTAGCAAACA+GGG | - | chr8.4:66328706-66328725 | MS.gene056784:intron | 25.0% |
| !! | ATAATTTGTGACATGTTCTA+TGG | - | chr8.4:66328636-66328655 | MS.gene056784:intron | 25.0% |
| !!! | ATTGTTGATTCTTCAATTCA+TGG | - | chr8.4:66327702-66327721 | MS.gene056784:intron | 25.0% |
| !!! | TAATTTGGTTTTCTTCTCAT+AGG | - | chr8.4:66328061-66328080 | MS.gene056784:intron | 25.0% |
| !!! | TCGTTTTTGAATATTACTTG+TGG | + | chr8.4:66328866-66328885 | None:intergenic | 25.0% |
| !!! | TGTTTGCTAGTTTTGTTTAA+GGG | + | chr8.4:66328706-66328725 | None:intergenic | 25.0% |
| !!! | TTGTTGATTCTTCAATTCAT+GGG | - | chr8.4:66327703-66327722 | MS.gene056784:intron | 25.0% |
| AAACTAATGTGCAATAACTG+AGG | - | chr8.4:66328903-66328922 | MS.gene056784:intron | 30.0% | |
| AAATCCTAAATCCAAAACTG+GGG | - | chr8.4:66327918-66327937 | MS.gene056784:intron | 30.0% | |
| AGAAATTATAGATGAGGCAA+TGG | + | chr8.4:66328000-66328019 | None:intergenic | 30.0% | |
| ATCTTGTCCTACTAAAACAT+TGG | + | chr8.4:66328405-66328424 | None:intergenic | 30.0% | |
| CGTTGTTGATATCAAAACTA+AGG | - | chr8.4:66327961-66327980 | MS.gene056784:CDS | 30.0% | |
| CTTAAACAAAACTAGCAAAC+AGG | - | chr8.4:66328705-66328724 | MS.gene056784:intron | 30.0% | |
| GAAATCCTAAATCCAAAACT+GGG | - | chr8.4:66327917-66327936 | MS.gene056784:intron | 30.0% | |
| GACGATATTGTTGAAACAAA+AGG | - | chr8.4:66329299-66329318 | MS.gene056784:CDS | 30.0% | |
| GTTTCTTTGTATTCTGCTTA+TGG | - | chr8.4:66328317-66328336 | MS.gene056784:intron | 30.0% | |
| TCTTGATATCCTTCATTCTA+AGG | - | chr8.4:66328738-66328757 | MS.gene056784:intron | 30.0% | |
| TGAAATCCTAAATCCAAAAC+TGG | - | chr8.4:66327916-66327935 | MS.gene056784:intron | 30.0% | |
| TGCAATTATGTCCTGTAAAA+CGG | + | chr8.4:66328940-66328959 | None:intergenic | 30.0% | |
| TGTGAAACCTGATCTAAATT+CGG | + | chr8.4:66329096-66329115 | None:intergenic | 30.0% | |
| ! | ACAAATTGTTTGTTGAGATC+AGG | + | chr8.4:66328166-66328185 | None:intergenic | 30.0% |
| ! | ATCAACTAATTCCGTTTTAC+AGG | - | chr8.4:66328926-66328945 | MS.gene056784:intron | 30.0% |
| ! | TCTGTTATTGATTATGTGGA+AGG | - | chr8.4:66327666-66327685 | MS.gene056784:intron | 30.0% |
| ! | TGCTTGTTCCTTTTGATATA+TGG | - | chr8.4:66328368-66328387 | MS.gene056784:intron | 30.0% |
| ! | TGTCTCTGTTATTGATTATG+TGG | - | chr8.4:66327662-66327681 | MS.gene056784:intron | 30.0% |
| ! | TTGTATTCTGCTTATGGTTT+TGG | - | chr8.4:66328323-66328342 | MS.gene056784:intron | 30.0% |
| !! | AATTTTGATACAGGCTAGAA+AGG | - | chr8.4:66329260-66329279 | MS.gene056784:CDS | 30.0% |
| !! | CTTACATTTAGGTTCTTTTG+TGG | - | chr8.4:66327735-66327754 | MS.gene056784:intron | 30.0% |
| !! | GCTTCTAGTTTAAGCTTATT+TGG | - | chr8.4:66328282-66328301 | MS.gene056784:intron | 30.0% |
| !! | TGAAGTTTGTTTTCGGAATT+TGG | - | chr8.4:66327760-66327779 | MS.gene056784:CDS | 30.0% |
| !! | TGTGGTTTGAAGTTTGTTTT+CGG | - | chr8.4:66327753-66327772 | MS.gene056784:CDS | 30.0% |
| !!! | CTGTTTGCTAGTTTTGTTTA+AGG | + | chr8.4:66328707-66328726 | None:intergenic | 30.0% |
| !!! | GGATATACCAATGTTTTAGT+AGG | - | chr8.4:66328395-66328414 | MS.gene056784:intron | 30.0% |
| !!! | TAGTTTTGATATCAACAACG+AGG | + | chr8.4:66327961-66327980 | None:intergenic | 30.0% |
| !!! | TTTATTTTAGCTCGAATTGC+AGG | - | chr8.4:66329050-66329069 | MS.gene056784:intron | 30.0% |
| ATCAGAACCGAATTTAGATC+AGG | - | chr8.4:66329086-66329105 | MS.gene056784:intron | 35.0% | |
| ATCCAGCTCCATATATCAAA+AGG | + | chr8.4:66328379-66328398 | None:intergenic | 35.0% | |
| ATTCACAAGTTGCCTATACT+TGG | - | chr8.4:66329159-66329178 | MS.gene056784:intron | 35.0% | |
| CACGTTTGTGACAAAACATA+CGG | + | chr8.4:66328466-66328485 | None:intergenic | 35.0% | |
| CTCGAATTGCAGGATATATA+TGG | - | chr8.4:66329060-66329079 | MS.gene056784:intron | 35.0% | |
| GTATTCTACACAGCAATCAT+TGG | + | chr8.4:66329331-66329350 | None:intergenic | 35.0% | |
| TACTAGACTTTCTTGTTGCA+TGG | - | chr8.4:66329370-66329389 | MS.gene056784:CDS | 35.0% | |
| TTACAGGACATAATTGCAAC+TGG | - | chr8.4:66328942-66328961 | MS.gene056784:intron | 35.0% | |
| ! | ATTGAACCTTTGAGAGATGT+CGG | - | chr8.4:66328597-66328616 | MS.gene056784:intron | 35.0% |
| ! | ATTTATGTGTTCCCCAGTTT+TGG | + | chr8.4:66327932-66327951 | None:intergenic | 35.0% |
| ! | TTCCTTTTGATATATGGAGC+TGG | - | chr8.4:66328374-66328393 | MS.gene056784:intron | 35.0% |
| !!! | TGCTAGTTTTGTTTAAGGGA+TGG | + | chr8.4:66328702-66328721 | None:intergenic | 35.0% |
| ACAAGTTGCCTATACTTGGA+TGG | - | chr8.4:66329163-66329182 | MS.gene056784:intron | 40.0% | |
| CAAGTTGCCTATACTTGGAT+GGG | - | chr8.4:66329164-66329183 | MS.gene056784:intron | 40.0% | |
| CTTACTTCCCATCCAAGTAT+AGG | + | chr8.4:66329174-66329193 | None:intergenic | 40.0% | |
| GAAAGGATTTAGTCCACTGT+TGG | - | chr8.4:66329277-66329296 | MS.gene056784:CDS | 40.0% | |
| TACAATGGACATATGACCAG+TGG | + | chr8.4:66328525-66328544 | None:intergenic | 40.0% | |
| TCAACAATATCGTCCAACAG+TGG | + | chr8.4:66329293-66329312 | None:intergenic | 40.0% | |
| TGTTTACCGACATCTCTCAA+AGG | + | chr8.4:66328606-66328625 | None:intergenic | 40.0% | |
| ! | ATGCATGCAGTTGACTTAAC+TGG | - | chr8.4:66329217-66329236 | MS.gene056784:intron | 40.0% |
| !! | CTTCAATTCATGGGTGTTGA+TGG | - | chr8.4:66327712-66327731 | MS.gene056784:intron | 40.0% |
| !! | GGGTGCATGAATTTTGATAC+AGG | - | chr8.4:66329251-66329270 | MS.gene056784:CDS | 40.0% |
| !! | GGTGTTGATGGCTTACATTT+AGG | - | chr8.4:66327724-66327743 | MS.gene056784:intron | 40.0% |
| !!! | GCTTATTTGGTGCCAGTTTT+TGG | - | chr8.4:66328295-66328314 | MS.gene056784:intron | 40.0% |
| !!! | GTTATTTTTGACCGTCCATC+AGG | - | chr8.4:66328984-66329003 | MS.gene056784:intron | 40.0% |
| !!! | TGTTCCCCAGTTTTGGATTT+AGG | + | chr8.4:66327925-66327944 | None:intergenic | 40.0% |
| !!! | TTCTGCTTATGGTTTTGGCT+TGG | - | chr8.4:66328328-66328347 | MS.gene056784:intron | 40.0% |
| ACAAAACATACGGATGTCGC+AGG | + | chr8.4:66328456-66328475 | None:intergenic | 45.0% | |
| ACGACAGTAAGAGAACGTGA+CGG | + | chr8.4:66327578-66327597 | None:intergenic | 45.0% | |
| ACTTAACTGGTTGCTCATCG+TGG | - | chr8.4:66329230-66329249 | MS.gene056784:intron | 45.0% | |
| AGATCAGGTTTCACAGCTTG+TGG | - | chr8.4:66329101-66329120 | MS.gene056784:intron | 45.0% | |
| ATAGTGAAGCCACCGGTAAT+TGG | + | chr8.4:66327628-66327647 | None:intergenic | 45.0% | |
| CAGGTATTAGCTACACTCAG+CGG | - | chr8.4:66329008-66329027 | MS.gene056784:intron | 45.0% | |
| CTAATACCTGTCCTGATGGA+CGG | + | chr8.4:66328998-66329017 | None:intergenic | 45.0% | |
| CTTAACTGGTTGCTCATCGT+GGG | - | chr8.4:66329231-66329250 | MS.gene056784:intron | 45.0% | |
| GACAAAGATAGTGAAGCCAC+CGG | + | chr8.4:66327635-66327654 | None:intergenic | 45.0% | |
| GTAGCTAATACCTGTCCTGA+TGG | + | chr8.4:66329002-66329021 | None:intergenic | 45.0% | |
| TAGTGAAGCCACCGGTAATT+GGG | + | chr8.4:66327627-66327646 | None:intergenic | 45.0% | |
| ! | ACTCAGCGGTCACTCTAAAA+AGG | - | chr8.4:66329022-66329041 | MS.gene056784:intron | 45.0% |
| ! | AGCGGTCACTCTAAAAAGGT+CGG | - | chr8.4:66329026-66329045 | MS.gene056784:intron | 45.0% |
| ACATATGACCAGTGGCACAC+AGG | + | chr8.4:66328517-66328536 | None:intergenic | 50.0% | |
| AGTGAAGCCACCGGTAATTG+GGG | + | chr8.4:66327626-66327645 | None:intergenic | 50.0% | |
| CATATGACCAGTGGCACACA+GGG | + | chr8.4:66328516-66328535 | None:intergenic | 50.0% | |
| CGTTCTCTTACTGTCGTCGT+CGG | - | chr8.4:66327581-66327600 | MS.gene056784:CDS | 50.0% | |
| CTCTTCGTCTCCCCAATTAC+CGG | - | chr8.4:66327613-66327632 | MS.gene056784:CDS | 50.0% | |
| GCTTGTGGAGGAAATCTGCA+AGG | - | chr8.4:66329116-66329135 | MS.gene056784:intron | 50.0% | |
| TCAGGTTTCACAGCTTGTGG+AGG | - | chr8.4:66329104-66329123 | MS.gene056784:intron | 50.0% | |
| TGTGGAGGAAATCTGCAAGG+AGG | - | chr8.4:66329119-66329138 | MS.gene056784:intron | 50.0% | |
| ! | TTTTGACCGTCCATCAGGAC+AGG | - | chr8.4:66328989-66329008 | MS.gene056784:intron | 50.0% |
| TTCGTCTCCCCAATTACCGG+TGG | - | chr8.4:66327616-66327635 | MS.gene056784:CDS | 55.0% | |
| CTACTTGCCCTGTGTGCCAC+TGG | - | chr8.4:66328506-66328525 | MS.gene056784:intron | 60.0% | |
| TTCGTCTCCTCCCACACGCC+TGG | - | chr8.4:66327547-66327566 | MS.gene056784:CDS | 65.0% | |
| GAGAACGTGACGGCACCGCC+AGG | + | chr8.4:66327568-66327587 | None:intergenic | 70.0% | |
| GTCTCCTCCCACACGCCTGG+CGG | - | chr8.4:66327550-66327569 | MS.gene056784:CDS | 70.0% | |
| GACGGCACCGCCAGGCGTGT+GGG | + | chr8.4:66327560-66327579 | None:intergenic | 75.0% | |
| TGACGGCACCGCCAGGCGTG+TGG | + | chr8.4:66327561-66327580 | None:intergenic | 75.0% | |
| ! | GGCACCGCCAGGCGTGTGGG+AGG | + | chr8.4:66327557-66327576 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 66327543 | 66329395 | 66327543 | ID=MS.gene056784 |
| chr8.4 | mRNA | 66327543 | 66329395 | 66327543 | ID=MS.gene056784.t1;Parent=MS.gene056784 |
| chr8.4 | exon | 66329251 | 66329395 | 66329251 | ID=MS.gene056784.t1.exon1;Parent=MS.gene056784.t1 |
| chr8.4 | CDS | 66329251 | 66329395 | 66329251 | ID=cds.MS.gene056784.t1;Parent=MS.gene056784.t1 |
| chr8.4 | exon | 66328179 | 66328261 | 66328179 | ID=MS.gene056784.t1.exon2;Parent=MS.gene056784.t1 |
| chr8.4 | CDS | 66328179 | 66328261 | 66328179 | ID=cds.MS.gene056784.t1;Parent=MS.gene056784.t1 |
| chr8.4 | exon | 66327928 | 66327990 | 66327928 | ID=MS.gene056784.t1.exon3;Parent=MS.gene056784.t1 |
| chr8.4 | CDS | 66327928 | 66327990 | 66327928 | ID=cds.MS.gene056784.t1;Parent=MS.gene056784.t1 |
| chr8.4 | exon | 66327750 | 66327866 | 66327750 | ID=MS.gene056784.t1.exon4;Parent=MS.gene056784.t1 |
| chr8.4 | CDS | 66327750 | 66327866 | 66327750 | ID=cds.MS.gene056784.t1;Parent=MS.gene056784.t1 |
| chr8.4 | exon | 66327543 | 66327665 | 66327543 | ID=MS.gene056784.t1.exon5;Parent=MS.gene056784.t1 |
| chr8.4 | CDS | 66327543 | 66327665 | 66327543 | ID=cds.MS.gene056784.t1;Parent=MS.gene056784.t1 |
| Gene Sequence |
| Protein sequence |
