Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82879.t1 | KEH24808.1 | 77.5 | 918 | 115 | 6 | 1 | 889 | 1 | 855 | 6.00E-295 | 1023.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82879.t1 | Q9M3G7 | 29.8 | 188 | 116 | 4 | 263 | 449 | 101 | 273 | 3.1e-13 | 79.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82879.t1 | A0A072U6P8 | 77.5 | 918 | 115 | 6 | 1 | 889 | 1 | 855 | 4.3e-295 | 1023.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene82879 | 0.82954 | 4.86E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene82879 | 0.896572 | 3.24E-76 | -1.69E-46 |
| MS.gene049343 | MS.gene82879 | 0.800829 | 1.20E-48 | -1.69E-46 |
| MS.gene049404 | MS.gene82879 | 0.809226 | 2.10E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene82879 | 0.842061 | 3.25E-58 | -1.69E-46 |
| MS.gene049452 | MS.gene82879 | 0.832563 | 8.80E-56 | -1.69E-46 |
| MS.gene049501 | MS.gene82879 | 0.844606 | 6.81E-59 | -1.69E-46 |
| MS.gene049850 | MS.gene82879 | 0.841676 | 4.11E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene82879 | 0.808635 | 2.81E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene82879 | 0.809949 | 1.47E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene82879 | 0.814096 | 1.83E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene82879 | 0.802111 | 6.55E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene82879 | 0.813287 | 2.76E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene82879 | 0.827228 | 1.76E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene82879 | 0.834023 | 3.81E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene82879 | -0.80651 | 7.94E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene82879 | 0.809226 | 2.10E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene82879 | 0.821001 | 5.09E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene82879 | 0.811811 | 5.81E-51 | -1.69E-46 |
| MS.gene050750 | MS.gene82879 | 0.813491 | 2.49E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene82879 | 0.808774 | 2.63E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene82879 | 0.800832 | 1.20E-48 | -1.69E-46 |
| MS.gene050763 | MS.gene82879 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene82879 | 0.814529 | 1.47E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene82879 | 0.835123 | 2.02E-56 | -1.69E-46 |
| MS.gene050826 | MS.gene82879 | 0.835965 | 1.23E-56 | -1.69E-46 |
| MS.gene050844 | MS.gene82879 | 0.816516 | 5.31E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene82879 | -0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene82879 | 0.807356 | 5.26E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene82879 | 0.80954 | 1.80E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene82879 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene051180 | MS.gene82879 | 0.823892 | 1.08E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene82879 | 0.854587 | 1.11E-61 | -1.69E-46 |
| MS.gene051210 | MS.gene82879 | 0.817579 | 3.06E-52 | -1.69E-46 |
| MS.gene051243 | MS.gene82879 | 0.820127 | 8.08E-53 | -1.69E-46 |
| MS.gene051328 | MS.gene82879 | 0.821049 | 4.96E-53 | -1.69E-46 |
| MS.gene051344 | MS.gene82879 | 0.817915 | 2.57E-52 | -1.69E-46 |
| MS.gene051363 | MS.gene82879 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene82879 | 0.809698 | 1.66E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene82879 | 0.825428 | 4.71E-54 | -1.69E-46 |
| MS.gene051577 | MS.gene82879 | 0.810739 | 9.92E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene82879 | 0.800252 | 1.57E-48 | -1.69E-46 |
| MS.gene051800 | MS.gene82879 | 0.822517 | 2.27E-53 | -1.69E-46 |
| MS.gene052012 | MS.gene82879 | 0.847212 | 1.33E-59 | -1.69E-46 |
| MS.gene052020 | MS.gene82879 | 0.817794 | 2.74E-52 | -1.69E-46 |
| MS.gene05215 | MS.gene82879 | 0.800309 | 1.53E-48 | -1.69E-46 |
| MS.gene052323 | MS.gene82879 | 0.8239 | 1.08E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene82879 | 0.806751 | 7.06E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene82879 | 0.830857 | 2.32E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene82879 | 0.837367 | 5.42E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene82879 | 0.856793 | 2.53E-62 | -1.69E-46 |
| MS.gene052612 | MS.gene82879 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene82879 | 0.821271 | 4.41E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene82879 | 0.880751 | 4.24E-70 | -1.69E-46 |
| MS.gene05288 | MS.gene82879 | 0.832953 | 7.04E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene82879 | 0.836878 | 7.23E-57 | -1.69E-46 |
| MS.gene05289 | MS.gene82879 | 0.84167 | 4.13E-58 | -1.69E-46 |
| MS.gene052954 | MS.gene82879 | 0.803892 | 2.81E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene82879 | 0.937805 | 1.90E-98 | -1.69E-46 |
| MS.gene053079 | MS.gene82879 | 0.81656 | 5.19E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene82879 | 0.82142 | 4.08E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene82879 | 0.8458 | 3.24E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene82879 | 0.8399 | 1.20E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene82879 | 0.831251 | 1.86E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene82879 | 0.828763 | 7.50E-55 | -1.69E-46 |
| MS.gene054379 | MS.gene82879 | 0.817545 | 3.12E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene82879 | 0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene82879 | 0.813123 | 3.00E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene82879 | 0.852236 | 5.27E-61 | -1.69E-46 |
| MS.gene054479 | MS.gene82879 | 0.806287 | 8.85E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene82879 | 0.839821 | 1.26E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene82879 | 0.817806 | 2.72E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene82879 | 0.836167 | 1.10E-56 | -1.69E-46 |
| MS.gene054657 | MS.gene82879 | 0.833785 | 4.37E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene82879 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene82879 | 0.816199 | 6.25E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene82879 | 0.819563 | 1.09E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene82879 | 0.875901 | 2.14E-68 | -1.69E-46 |
| MS.gene05517 | MS.gene82879 | 0.829416 | 5.21E-55 | -1.69E-46 |
| MS.gene055222 | MS.gene82879 | 0.806873 | 6.66E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene82879 | 0.835939 | 1.25E-56 | -1.69E-46 |
| MS.gene055363 | MS.gene82879 | 0.827816 | 1.27E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene82879 | 0.819626 | 1.05E-52 | -1.69E-46 |
| MS.gene055608 | MS.gene82879 | 0.82248 | 2.32E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene82879 | 0.854803 | 9.65E-62 | -1.69E-46 |
| MS.gene055701 | MS.gene82879 | 0.838335 | 3.06E-57 | -1.69E-46 |
| MS.gene055818 | MS.gene82879 | 0.871554 | 6.25E-67 | -1.69E-46 |
| MS.gene055926 | MS.gene82879 | 0.86148 | 9.96E-64 | -1.69E-46 |
| MS.gene05604 | MS.gene82879 | 0.82107 | 4.91E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene82879 | 0.848582 | 5.59E-60 | -1.69E-46 |
| MS.gene056252 | MS.gene82879 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene82879 | 0.814617 | 1.41E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene82879 | 0.816671 | 4.90E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene82879 | 0.81913 | 1.37E-52 | -1.69E-46 |
| MS.gene056595 | MS.gene82879 | 0.819263 | 1.27E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene82879 | 0.804981 | 1.66E-49 | -1.69E-46 |
| MS.gene056784 | MS.gene82879 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene056952 | MS.gene82879 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene82879 | 0.806991 | 6.29E-50 | -1.69E-46 |
| MS.gene057140 | MS.gene82879 | 0.824798 | 6.64E-54 | -1.69E-46 |
| MS.gene057208 | MS.gene82879 | 0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene057394 | MS.gene82879 | 0.811037 | 8.55E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene82879 | 0.840627 | 7.76E-58 | -1.69E-46 |
| MS.gene057446 | MS.gene82879 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene82879 | 0.806792 | 6.93E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene82879 | 0.801944 | 7.09E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene82879 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene057855 | MS.gene82879 | 0.860815 | 1.59E-63 | -1.69E-46 |
| MS.gene057869 | MS.gene82879 | 0.837573 | 4.80E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene82879 | 0.845811 | 3.22E-59 | -1.69E-46 |
| MS.gene058009 | MS.gene82879 | 0.828422 | 9.07E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene82879 | 0.86027 | 2.32E-63 | -1.69E-46 |
| MS.gene058126 | MS.gene82879 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene82879 | 0.828678 | 7.86E-55 | -1.69E-46 |
| MS.gene058292 | MS.gene82879 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene82879 | 0.827802 | 1.28E-54 | -1.69E-46 |
| MS.gene05847 | MS.gene82879 | 0.815434 | 9.26E-52 | -1.69E-46 |
| MS.gene058548 | MS.gene82879 | 0.848304 | 6.67E-60 | -1.69E-46 |
| MS.gene058549 | MS.gene82879 | 0.829346 | 5.42E-55 | -1.69E-46 |
| MS.gene058595 | MS.gene82879 | 0.8553 | 6.92E-62 | -1.69E-46 |
| MS.gene058625 | MS.gene82879 | 0.836492 | 9.06E-57 | -1.69E-46 |
| MS.gene05868 | MS.gene82879 | 0.803161 | 3.98E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene82879 | 0.83498 | 2.19E-56 | -1.69E-46 |
| MS.gene058979 | MS.gene82879 | 0.870407 | 1.49E-66 | -1.69E-46 |
| MS.gene059128 | MS.gene82879 | 0.830539 | 2.77E-55 | -1.69E-46 |
| MS.gene059151 | MS.gene82879 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene82879 | 0.831902 | 1.28E-55 | -1.69E-46 |
| MS.gene059249 | MS.gene82879 | 0.816251 | 6.09E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene82879 | 0.840815 | 6.93E-58 | -1.69E-46 |
| MS.gene059331 | MS.gene82879 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene059569 | MS.gene82879 | 0.805269 | 1.45E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene82879 | 0.804627 | 1.97E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene82879 | 0.80301 | 4.27E-49 | -1.69E-46 |
| MS.gene05973 | MS.gene82879 | 0.816654 | 4.95E-52 | -1.69E-46 |
| MS.gene05978 | MS.gene82879 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene82879 | 0.851154 | 1.07E-60 | -1.69E-46 |
| MS.gene059842 | MS.gene82879 | 0.883926 | 2.97E-71 | -1.69E-46 |
| MS.gene059937 | MS.gene82879 | 0.822744 | 2.01E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene82879 | 0.851762 | 7.19E-61 | -1.69E-46 |
| MS.gene060137 | MS.gene82879 | -0.825075 | 5.71E-54 | -1.69E-46 |
| MS.gene060296 | MS.gene82879 | 0.843261 | 1.56E-58 | -1.69E-46 |
| MS.gene060310 | MS.gene82879 | 0.828137 | 1.06E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene82879 | 0.855276 | 7.03E-62 | -1.69E-46 |
| MS.gene06052 | MS.gene82879 | 0.827444 | 1.56E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene82879 | 0.829052 | 6.39E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene82879 | 0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene82879 | 0.843681 | 1.21E-58 | -1.69E-46 |
| MS.gene060685 | MS.gene82879 | 0.84997 | 2.30E-60 | -1.69E-46 |
| MS.gene060802 | MS.gene82879 | 0.860193 | 2.45E-63 | -1.69E-46 |
| MS.gene060803 | MS.gene82879 | 0.892407 | 1.63E-74 | -1.69E-46 |
| MS.gene060907 | MS.gene82879 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene82879 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene82879 | 0.85413 | 1.51E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82879.t1 | MTR_6g005840 | 91.222 | 900 | 65 | 4 | 1 | 889 | 1 | 897 | 0.0 | 1605 |
| MS.gene82879.t1 | MTR_6g005840 | 87.000 | 900 | 61 | 5 | 1 | 889 | 1 | 855 | 0.0 | 1515 |
| MS.gene82879.t1 | MTR_6g005960 | 80.925 | 692 | 62 | 6 | 1 | 682 | 1 | 632 | 0.0 | 1066 |
| MS.gene82879.t1 | MTR_6g005960 | 82.609 | 46 | 8 | 0 | 258 | 303 | 631 | 676 | 2.99e-17 | 87.0 |
| MS.gene82879.t1 | MTR_1g066890 | 30.769 | 351 | 181 | 12 | 129 | 449 | 165 | 483 | 1.09e-31 | 134 |
| MS.gene82879.t1 | MTR_1g072780 | 36.500 | 200 | 121 | 4 | 268 | 465 | 362 | 557 | 1.58e-30 | 130 |
| MS.gene82879.t1 | MTR_2g104120 | 30.743 | 296 | 160 | 9 | 267 | 546 | 257 | 523 | 2.41e-28 | 122 |
| MS.gene82879.t1 | MTR_4g036445 | 33.058 | 242 | 152 | 6 | 267 | 500 | 313 | 552 | 1.64e-26 | 116 |
| MS.gene82879.t1 | MTR_1g049120 | 35.263 | 190 | 117 | 5 | 264 | 449 | 286 | 473 | 3.42e-26 | 116 |
| MS.gene82879.t1 | MTR_7g113180 | 45.556 | 90 | 48 | 1 | 268 | 356 | 87 | 176 | 6.19e-21 | 99.4 |
| MS.gene82879.t1 | MTR_2g104980 | 43.000 | 100 | 56 | 1 | 267 | 365 | 232 | 331 | 1.74e-18 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82879.t1 | AT3G27860 | 32.427 | 478 | 242 | 17 | 268 | 725 | 61 | 477 | 1.60e-53 | 198 |
| MS.gene82879.t1 | AT3G27860 | 32.427 | 478 | 242 | 17 | 268 | 725 | 61 | 477 | 1.60e-53 | 198 |
| MS.gene82879.t1 | AT3G09670 | 37.569 | 181 | 109 | 3 | 272 | 449 | 201 | 380 | 4.47e-27 | 118 |
| MS.gene82879.t1 | AT3G09670 | 37.569 | 181 | 109 | 3 | 272 | 449 | 201 | 380 | 4.47e-27 | 118 |
| MS.gene82879.t1 | AT5G02950 | 30.147 | 272 | 171 | 6 | 176 | 439 | 8 | 268 | 3.15e-26 | 115 |
| MS.gene82879.t1 | AT5G02950 | 30.147 | 272 | 171 | 6 | 176 | 439 | 8 | 268 | 3.15e-26 | 115 |
| MS.gene82879.t1 | AT5G27650 | 32.292 | 192 | 106 | 5 | 268 | 446 | 171 | 351 | 1.50e-21 | 101 |
| MS.gene82879.t1 | AT3G05430 | 46.667 | 90 | 47 | 1 | 268 | 356 | 133 | 222 | 2.50e-20 | 97.4 |
| MS.gene82879.t1 | AT3G05430 | 37.226 | 137 | 72 | 4 | 268 | 400 | 133 | 259 | 2.61e-20 | 97.4 |
| MS.gene82879.t1 | AT3G48187 | 28.061 | 196 | 109 | 4 | 263 | 449 | 101 | 273 | 1.34e-14 | 79.0 |
Find 195 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTCCTGAACCTGATTT+TGG | 0.131227 | 6.1:-1585889 | None:intergenic |
| TTCTCACTTGTTTCCACTAT+TGG | 0.202116 | 6.1:-1584944 | None:intergenic |
| TCATCAAAATTATCCTTAAA+AGG | 0.203644 | 6.1:-1585400 | None:intergenic |
| CCCCTTCTTGCCGCTGGTCT+TGG | 0.225027 | 6.1:-1586793 | None:intergenic |
| TTTCTCTTCCTTCCAGTTCC+AGG | 0.230105 | 6.1:-1586648 | None:intergenic |
| GAAAAGCATCGCTGACATTA+TGG | 0.243680 | 6.1:+1585933 | MS.gene82879:CDS |
| TCTGGTTGCAATTAAGTCTA+AGG | 0.249968 | 6.1:+1586014 | MS.gene82879:CDS |
| CTTTCTCATCATCTGGTGTT+TGG | 0.275619 | 6.1:-1586437 | None:intergenic |
| CTTCTTGTCTTGTGAAGGTT+TGG | 0.278613 | 6.1:-1586862 | None:intergenic |
| CTGAATCGATGGAACCATTT+GGG | 0.308664 | 6.1:+1584441 | MS.gene82879:CDS |
| GATTGATCAAGCTCAGATTC+TGG | 0.308922 | 6.1:-1586675 | None:intergenic |
| CTCTTGGTAGCTTACTTTGA+TGG | 0.313271 | 6.1:+1585343 | MS.gene82879:CDS |
| GAGCGAGGTGAAAGGTCTTT+TGG | 0.315567 | 6.1:+1587034 | MS.gene82879:CDS |
| CTCTCACTTGCCTCCACTAT+TGG | 0.331300 | 6.1:-1585052 | None:intergenic |
| AGGGTTTCTTTCTCATCATC+TGG | 0.332565 | 6.1:-1586444 | None:intergenic |
| GGATAGTGAGGAGGGAGAAA+AGG | 0.332631 | 6.1:+1584991 | MS.gene82879:CDS |
| TATTGATATTGCTAGTGTTC+TGG | 0.336830 | 6.1:+1585684 | MS.gene82879:CDS |
| TTCTCGCTTATCTCCACAAT+TGG | 0.342327 | 6.1:-1584848 | None:intergenic |
| ATGCTCTCTGTGCCACTATC+AGG | 0.344127 | 6.1:-1585601 | None:intergenic |
| AATGATTCCCCGGTGAATAA+TGG | 0.346633 | 6.1:+1584599 | MS.gene82879:CDS |
| GAAGGAACCTTGACTTTCTC+TGG | 0.349916 | 6.1:-1586471 | None:intergenic |
| TCTACCTTTGTCTTGAAATC+AGG | 0.353557 | 6.1:-1587011 | None:intergenic |
| TTCTGCTTTCTTCTACGGTT+CGG | 0.373335 | 6.1:-1585913 | None:intergenic |
| GCTGAAAATGTTATGGTTGA+AGG | 0.374647 | 6.1:+1584479 | MS.gene82879:CDS |
| TTCAAGTCCGAGAACCCGTT+TGG | 0.377020 | 6.1:-1585785 | None:intergenic |
| TAGTTTAGCTGAAAATGTTA+TGG | 0.387200 | 6.1:+1584472 | MS.gene82879:CDS |
| GATAGTGAGGAGGGAGAAAA+GGG | 0.387448 | 6.1:+1584992 | MS.gene82879:CDS |
| GTGCCCCTCCTTGACATTTG+TGG | 0.393072 | 6.1:-1586534 | None:intergenic |
| AAGAGAAAAGAGTTGCTTGC+AGG | 0.395656 | 6.1:+1586090 | MS.gene82879:CDS |
| AAAAGCATCGCTGACATTAT+GGG | 0.401533 | 6.1:+1585934 | MS.gene82879:CDS |
| CCTTGACTTTCTCTGGATCA+AGG | 0.404674 | 6.1:-1586464 | None:intergenic |
| TGCAAGTGATGATGAAGTTC+TGG | 0.405456 | 6.1:+1585996 | MS.gene82879:CDS |
| GTGTCTTCTTTGTTGAAAAC+GGG | 0.409749 | 6.1:+1584749 | MS.gene82879:CDS |
| AGTCGTCCGTTTGTTGTGGC+GGG | 0.411945 | 6.1:+1585511 | MS.gene82879:CDS |
| ATCGGTCCCCTTCTTGCCGC+TGG | 0.412154 | 6.1:-1586799 | None:intergenic |
| AATGAGAAGGATAGTGAGGA+GGG | 0.420006 | 6.1:+1584983 | MS.gene82879:CDS |
| ATGATTCCCCGGTGAATAAT+GGG | 0.423865 | 6.1:+1584600 | MS.gene82879:CDS |
| TCATCCGTGGTGGCCAGGTC+GGG | 0.423902 | 6.1:+1585264 | MS.gene82879:CDS |
| GGTGTCTTCTTTGTTGAAAA+CGG | 0.424689 | 6.1:+1584748 | MS.gene82879:CDS |
| GAGATGGTGTGGCTGGAGTT+AGG | 0.425440 | 6.1:-1586896 | None:intergenic |
| TCTTTCTTCTTGTCTTGTGA+AGG | 0.429340 | 6.1:-1586867 | None:intergenic |
| GTCATACAGCAGAAACTTCA+AGG | 0.429955 | 6.1:+1586951 | MS.gene82879:CDS |
| GAGGATCCCAAACGGGTTCT+CGG | 0.430303 | 6.1:+1585778 | MS.gene82879:CDS |
| ACTGAATCGATGGAACCATT+TGG | 0.431119 | 6.1:+1584440 | MS.gene82879:CDS |
| GCCGAAAGAACCAAATGAAA+AGG | 0.433551 | 6.1:+1586248 | MS.gene82879:CDS |
| GCAGGAGAAGAATGAGCTTA+AGG | 0.435652 | 6.1:+1584508 | MS.gene82879:CDS |
| GTGGAAAAGAAAGCTGTGAC+AGG | 0.440805 | 6.1:+1586136 | MS.gene82879:CDS |
| TTCGGCGGTTACACTTGAAC+CGG | 0.441099 | 6.1:+1585624 | MS.gene82879:CDS |
| ACCAAGACCAGCGGCAAGAA+GGG | 0.445474 | 6.1:+1586792 | MS.gene82879:CDS |
| TCAAGTCCGAGAACCCGTTT+GGG | 0.445752 | 6.1:-1585784 | None:intergenic |
| ATATCACCTAGCGAAGATTC+TGG | 0.445815 | 6.1:+1586705 | MS.gene82879:CDS |
| TTGACCCCAAAATCAGGTTC+AGG | 0.446624 | 6.1:+1585883 | MS.gene82879:CDS |
| GACTGTTGAGGTTCCAATAG+TGG | 0.448213 | 6.1:+1584931 | MS.gene82879:CDS |
| AACGGGAAGGAGAATGAGGA+GGG | 0.451447 | 6.1:+1584887 | MS.gene82879:CDS |
| TTTGTGAAGGGAAGAGGTGC+TGG | 0.451932 | 6.1:+1586339 | MS.gene82879:CDS |
| AGTCCTCTTCAAACGGCCCT+TGG | 0.454433 | 6.1:-1585846 | None:intergenic |
| GTCCTCTTCAAACGGCCCTT+GGG | 0.454567 | 6.1:-1585845 | None:intergenic |
| TTTGAAGGAGAATGATTCTC+AGG | 0.456489 | 6.1:+1584571 | MS.gene82879:CDS |
| AGGGGCAAATCGCAGCATTC+AGG | 0.456509 | 6.1:+1586156 | MS.gene82879:CDS |
| AACAGCATAGGTGAAAGCTT+TGG | 0.458113 | 6.1:-1585443 | None:intergenic |
| AATGAAGCTGAACCTGGAAC+TGG | 0.462625 | 6.1:+1586636 | MS.gene82879:CDS |
| CTGCCATTGACCCCAAAATC+AGG | 0.463002 | 6.1:+1585877 | MS.gene82879:CDS |
| GTCATCCGTGGTGGCCAGGT+CGG | 0.463100 | 6.1:+1585263 | MS.gene82879:CDS |
| TAGTGGCACAGAGAGCATTT+CGG | 0.469354 | 6.1:+1585606 | MS.gene82879:CDS |
| TATTGCTAGTGTTCTGGAGC+TGG | 0.469362 | 6.1:+1585690 | MS.gene82879:CDS |
| TTTGAAGGAGAATGACTCTC+AGG | 0.472324 | 6.1:+1584697 | MS.gene82879:CDS |
| AAGAGTCATCCGTGGTGGCC+AGG | 0.472435 | 6.1:+1585259 | MS.gene82879:CDS |
| AAACTAGTTTCAACCCCAAA+TGG | 0.472605 | 6.1:-1584455 | None:intergenic |
| GTCTATTGAGGTACCAATAG+TGG | 0.480190 | 6.1:+1585039 | MS.gene82879:CDS |
| ATATAAGTTACCTTGTTATG+AGG | 0.486781 | 6.1:+1585759 | MS.gene82879:CDS |
| TTGATGCAAAAGATAAGGAA+TGG | 0.488934 | 6.1:+1585971 | MS.gene82879:CDS |
| TTGTTATGAGGATCCCAAAC+GGG | 0.489406 | 6.1:+1585771 | MS.gene82879:CDS |
| CTTGACTTTCTCTGGATCAA+GGG | 0.492651 | 6.1:-1586463 | None:intergenic |
| ACTTTGATGGAACATTTGCT+TGG | 0.495401 | 6.1:+1585356 | MS.gene82879:CDS |
| ATGTTGATATTGAAGTGAAC+GGG | 0.496688 | 6.1:+1584870 | MS.gene82879:CDS |
| GATGAGTCGTCCGTTTGTTG+TGG | 0.497438 | 6.1:+1585507 | MS.gene82879:CDS |
| AGCTGGAAATATTGAAGGCT+CGG | 0.497817 | 6.1:+1585707 | MS.gene82879:CDS |
| GAATACAATGAAGCTGAACC+TGG | 0.498419 | 6.1:+1586630 | MS.gene82879:CDS |
| GACTGTGGAGATTCCAATTG+TGG | 0.500206 | 6.1:+1584835 | MS.gene82879:CDS |
| AACAAAGATGACAATTGTGA+TGG | 0.500623 | 6.1:+1585115 | MS.gene82879:CDS |
| TCTGGAGCTGGAAATATTGA+AGG | 0.502048 | 6.1:+1585702 | MS.gene82879:CDS |
| AGAGACTTTGTGAAGGGAAG+AGG | 0.502911 | 6.1:+1586333 | MS.gene82879:CDS |
| CAAGAAGCTGTAAATGAGGT+TGG | 0.503519 | 6.1:+1585466 | MS.gene82879:CDS |
| TTTGACAGAATTTCGGCTGA+AGG | 0.505616 | 6.1:-1586489 | None:intergenic |
| ACAGCAGAAACTTCAAGGTC+TGG | 0.505797 | 6.1:+1586956 | MS.gene82879:CDS |
| GAAACAAAAGAATAGACTCT+TGG | 0.505954 | 6.1:+1585327 | MS.gene82879:CDS |
| GTCGTCCGTTTGTTGTGGCG+GGG | 0.506854 | 6.1:+1585512 | MS.gene82879:CDS |
| CAGTGAGGCATTTCAAGAGT+TGG | 0.507802 | 6.1:+1586392 | MS.gene82879:CDS |
| GACTATTGAGGATTCAATAG+TGG | 0.508888 | 6.1:+1585147 | MS.gene82879:CDS |
| AGCCACACCATCTCTGTCAC+AGG | 0.510870 | 6.1:+1586905 | MS.gene82879:CDS |
| TCAGGTTGTGAATGATTCCC+CGG | 0.512345 | 6.1:+1584589 | MS.gene82879:CDS |
| GATGAATGAGAAGGATAGTG+AGG | 0.516877 | 6.1:+1584979 | MS.gene82879:CDS |
| GTCTGAATTCGCTCCAATGT+TGG | 0.517774 | 6.1:+1585543 | MS.gene82879:CDS |
| TCGTCCGTTTGTTGTGGCGG+GGG | 0.517804 | 6.1:+1585513 | MS.gene82879:CDS |
| TCTTCAAACGGCCCTTGGGA+TGG | 0.521494 | 6.1:-1585841 | None:intergenic |
| AGTGAACGGGAAGGAGAATG+AGG | 0.522445 | 6.1:+1584883 | MS.gene82879:CDS |
| AGCGGAGAGGAAAACGATGA+AGG | 0.522589 | 6.1:+1586222 | MS.gene82879:CDS |
| AGATGTTGATGCAAAAGATA+AGG | 0.523242 | 6.1:+1585966 | MS.gene82879:CDS |
| GAATGAGAAGGATAGTGAGG+AGG | 0.523714 | 6.1:+1584982 | MS.gene82879:CDS |
| GAGAACATCAGCGGTGGGAG+CGG | 0.524254 | 6.1:+1586204 | MS.gene82879:CDS |
| AACCAAGACCAGCGGCAAGA+AGG | 0.531503 | 6.1:+1586791 | MS.gene82879:CDS |
| CCGAAAGAACCAAATGAAAA+GGG | 0.533668 | 6.1:+1586249 | MS.gene82879:CDS |
| GTAGAGTAGTCCTCTTCAAA+CGG | 0.540996 | 6.1:-1585853 | None:intergenic |
| ACTGATACAGAGACTGTAAG+AGG | 0.542096 | 6.1:+1586114 | MS.gene82879:CDS |
| CCAAGACCAGCGGCAAGAAG+GGG | 0.545038 | 6.1:+1586793 | MS.gene82879:CDS |
| GCGGAGAGGAAAACGATGAA+GGG | 0.547080 | 6.1:+1586223 | MS.gene82879:CDS |
| AATGTTGATATTGAAGTGAA+CGG | 0.548378 | 6.1:+1584869 | MS.gene82879:CDS |
| GAAAAGGGTGAAAATTGTGA+TGG | 0.548470 | 6.1:+1585007 | MS.gene82879:CDS |
| TTAAAAGGCTTCAATTGTGA+CGG | 0.549559 | 6.1:-1585385 | None:intergenic |
| GAGTCGTCCGTTTGTTGTGG+CGG | 0.551345 | 6.1:+1585510 | MS.gene82879:CDS |
| GAAGACACCCCATTATTCAC+CGG | 0.552105 | 6.1:-1584608 | None:intergenic |
| TGTGACAGAGATGGTGTGGC+TGG | 0.552295 | 6.1:-1586903 | None:intergenic |
| GAAATCAGGCGATTTGTCGT+CGG | 0.552919 | 6.1:-1586997 | None:intergenic |
| ATCCCAAGGGCCGTTTGAAG+AGG | 0.558737 | 6.1:+1585843 | MS.gene82879:CDS |
| AAGCTGTAAATGAGGTTGGA+AGG | 0.558828 | 6.1:+1585470 | MS.gene82879:CDS |
| ACTGAGAAGGAGAGCGCGGA+AGG | 0.560275 | 6.1:+1585091 | MS.gene82879:CDS |
| GACGATCAACTTAGATGTCT+CGG | 0.562618 | 6.1:-1586931 | None:intergenic |
| AAAGCATCGCTGACATTATG+GGG | 0.562780 | 6.1:+1585935 | MS.gene82879:CDS |
| CTGGTTGCAATTAAGTCTAA+GGG | 0.563006 | 6.1:+1586015 | MS.gene82879:CDS |
| CGCTTAGTCCACAAATGTCA+AGG | 0.564092 | 6.1:+1586526 | MS.gene82879:CDS |
| GCAAGTTCCGACGCATCAGA+CGG | 0.564834 | 6.1:-1585295 | None:intergenic |
| TATGGTTGAAGGTTCAGAGC+AGG | 0.565252 | 6.1:+1584490 | MS.gene82879:CDS |
| TTGACGATTTGATTGATGAA+AGG | 0.567900 | 6.1:+1585197 | MS.gene82879:CDS |
| TCAATCAGAGACTTTGTGAA+GGG | 0.572253 | 6.1:+1586327 | MS.gene82879:CDS |
| TGTGATAAGAAAGTCAAAGA+AGG | 0.573083 | 6.1:+1584797 | MS.gene82879:CDS |
| AGTGGAGGCTAGTGAGAGCA+TGG | 0.574743 | 6.1:+1585165 | MS.gene82879:CDS |
| TGATGCAAAAGATAAGGAAT+GGG | 0.574961 | 6.1:+1585972 | MS.gene82879:CDS |
| TTGAAACTCGAGGAGAAAGC+AGG | 0.575194 | 6.1:-1586362 | None:intergenic |
| CTTGTTATGAGGATCCCAAA+CGG | 0.575919 | 6.1:+1585770 | MS.gene82879:CDS |
| GGAAAAGAAAGCTGTGACAG+GGG | 0.576442 | 6.1:+1586138 | MS.gene82879:CDS |
| GAACGGGAAGGAGAATGAGG+AGG | 0.577213 | 6.1:+1584886 | MS.gene82879:CDS |
| AAGGCTTCAATTGTGACGGA+TGG | 0.578767 | 6.1:-1585381 | None:intergenic |
| TGGACCAGCCAAGAAAAGAA+AGG | 0.581389 | 6.1:+1586725 | MS.gene82879:CDS |
| AAGGTAGAGAGCGAGGTGAA+AGG | 0.582258 | 6.1:+1587026 | MS.gene82879:CDS |
| TGGGAAGATCGAGACTATTG+AGG | 0.585945 | 6.1:+1585135 | MS.gene82879:CDS |
| AGCTGTAAATGAGGTTGGAA+GGG | 0.590294 | 6.1:+1585471 | MS.gene82879:CDS |
| ACAAAGATGACAATTGTGAT+GGG | 0.590514 | 6.1:+1585116 | MS.gene82879:CDS |
| GCAGTTGAAGCACCATCCCA+AGG | 0.591867 | 6.1:+1585829 | MS.gene82879:CDS |
| AAAAGGGTGAAAATTGTGAT+GGG | 0.593063 | 6.1:+1585008 | MS.gene82879:CDS |
| TGAATCGATGGAACCATTTG+GGG | 0.594772 | 6.1:+1584442 | MS.gene82879:CDS |
| TAGTCCACAAATGTCAAGGA+GGG | 0.595379 | 6.1:+1586530 | MS.gene82879:CDS |
| CGATGTTGAAATGACTGAGA+AGG | 0.596335 | 6.1:+1585078 | MS.gene82879:CDS |
| ACTTGAGAAAGTAACTCAGC+CGG | 0.596936 | 6.1:-1585643 | None:intergenic |
| GCTGGTCCAGAATCTTCGCT+AGG | 0.598905 | 6.1:-1586711 | None:intergenic |
| TTATGATCCGTCTGATGCGT+CGG | 0.599363 | 6.1:+1585288 | MS.gene82879:CDS |
| AAGACACCCCATTATTCACC+GGG | 0.600301 | 6.1:-1584607 | None:intergenic |
| CTGTTATACTTTGAAACTCG+AGG | 0.601039 | 6.1:-1586372 | None:intergenic |
| TACAGCTTCTTGAACAGCAT+AGG | 0.602664 | 6.1:-1585455 | None:intergenic |
| TCTCTGATTGAAGTAGTGAA+AGG | 0.604217 | 6.1:-1586315 | None:intergenic |
| TTCAATCAGAGACTTTGTGA+AGG | 0.604784 | 6.1:+1586326 | MS.gene82879:CDS |
| AAATGAGGTTGGAAGGGTGC+TGG | 0.605434 | 6.1:+1585477 | MS.gene82879:CDS |
| CGTTTGGGATCCTCATAACA+AGG | 0.612389 | 6.1:-1585769 | None:intergenic |
| TTTGATGATATGGTGGGACA+AGG | 0.614353 | 6.1:+1585415 | MS.gene82879:CDS |
| TGGAAAAGAAAGCTGTGACA+GGG | 0.618152 | 6.1:+1586137 | MS.gene82879:CDS |
| TAAACCCGACCTGGCCACCA+CGG | 0.618975 | 6.1:-1585268 | None:intergenic |
| AGAAGTTCATTGTATCGCGA+AGG | 0.620174 | 6.1:+1586594 | MS.gene82879:CDS |
| TGATATTGAAGTGAACGGGA+AGG | 0.622379 | 6.1:+1584874 | MS.gene82879:CDS |
| GACGGATCATAAACCCGACC+TGG | 0.623787 | 6.1:-1585277 | None:intergenic |
| CAAGACAAAGGTAGAGAGCG+AGG | 0.627059 | 6.1:+1587019 | MS.gene82879:CDS |
| ATCGCCTGATTTCAAGACAA+AGG | 0.628439 | 6.1:+1587007 | MS.gene82879:CDS |
| GGTAATGAGAACATCAGCGG+TGG | 0.629748 | 6.1:+1586198 | MS.gene82879:CDS |
| TATTGAGGATTCAATAGTGG+AGG | 0.631691 | 6.1:+1585150 | MS.gene82879:CDS |
| TGGGAAGATAGAGTCTATTG+AGG | 0.636228 | 6.1:+1585027 | MS.gene82879:CDS |
| TGTGGTTGATACTGAATCGA+TGG | 0.639717 | 6.1:+1584430 | MS.gene82879:CDS |
| TTGAAAACGGGAGAAAACGA+TGG | 0.643487 | 6.1:+1584761 | MS.gene82879:CDS |
| AGTCCACAAATGTCAAGGAG+GGG | 0.647484 | 6.1:+1586531 | MS.gene82879:CDS |
| CTGATTGAAGTAGTGAAAGG+AGG | 0.649899 | 6.1:-1586312 | None:intergenic |
| TCGGTACCCTGTGACAGAGA+TGG | 0.651603 | 6.1:-1586912 | None:intergenic |
| TGTTCAAGAAGCTGTAAATG+AGG | 0.656142 | 6.1:+1585462 | MS.gene82879:CDS |
| AAGCTGAACCTGGAACTGGA+AGG | 0.657278 | 6.1:+1586640 | MS.gene82879:CDS |
| TATTGAGGTACCAATAGTGG+AGG | 0.665817 | 6.1:+1585042 | MS.gene82879:CDS |
| GATACAGAGACTGTAAGAGG+TGG | 0.665933 | 6.1:+1586117 | MS.gene82879:CDS |
| CATCAGCGGTGGGAGCGGAG+AGG | 0.666693 | 6.1:+1586209 | MS.gene82879:CDS |
| CAGTTGAAGCACCATCCCAA+GGG | 0.667937 | 6.1:+1585830 | MS.gene82879:CDS |
| ACCCTGTGACAGAGATGGTG+TGG | 0.668589 | 6.1:-1586907 | None:intergenic |
| GTAATGAGAACATCAGCGGT+GGG | 0.671348 | 6.1:+1586199 | MS.gene82879:CDS |
| CAAATCGCAGCATTCAGGTG+AGG | 0.675770 | 6.1:+1586161 | MS.gene82879:CDS |
| TTAGTCCACAAATGTCAAGG+AGG | 0.675813 | 6.1:+1586529 | MS.gene82879:CDS |
| TGATGTTGAGATGAATGAGA+AGG | 0.677474 | 6.1:+1584970 | MS.gene82879:CDS |
| GCCACACCATCTCTGTCACA+GGG | 0.681280 | 6.1:+1586906 | MS.gene82879:CDS |
| TGGCACAGAGAGCATTTCGG+CGG | 0.682197 | 6.1:+1585609 | MS.gene82879:CDS |
| CCTTGATCCAGAGAAAGTCA+AGG | 0.684171 | 6.1:+1586464 | MS.gene82879:CDS |
| TGATTCTGAAGTGAATAATG+AGG | 0.686144 | 6.1:+1584727 | MS.gene82879:CDS |
| AATGACTGAGAAGGAGAGCG+CGG | 0.688964 | 6.1:+1585087 | MS.gene82879:CDS |
| AGATTAAGAGTCATCCGTGG+TGG | 0.700219 | 6.1:+1585254 | MS.gene82879:CDS |
| TCTGGTAATGAGAACATCAG+CGG | 0.703698 | 6.1:+1586195 | MS.gene82879:CDS |
| GCTCGTGAAACCAAGACCAG+CGG | 0.704734 | 6.1:+1586783 | MS.gene82879:CDS |
| AAGCATCGCTGACATTATGG+GGG | 0.710590 | 6.1:+1585936 | MS.gene82879:CDS |
| ACGGGAAGGAGAATGAGGAG+GGG | 0.710995 | 6.1:+1584888 | MS.gene82879:CDS |
| TCTTCTGAGATGAATAATGA+CGG | 0.712707 | 6.1:+1584626 | MS.gene82879:CDS |
| TTTGGAGGATGTGAACAACA+TGG | 0.726968 | 6.1:+1587052 | MS.gene82879:CDS |
| TGATTCCCCGGTGAATAATG+GGG | 0.731764 | 6.1:+1584601 | MS.gene82879:CDS |
| AGTTTCAAAGTATAACAGTG+AGG | 0.743340 | 6.1:+1586377 | MS.gene82879:CDS |
| GAAAGATTAAGAGTCATCCG+TGG | 0.746341 | 6.1:+1585251 | MS.gene82879:CDS |
| AGACACCCCATTATTCACCG+GGG | 0.792139 | 6.1:-1584606 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATCAAAATTATCCTTAAA+AGG | - | chr6.1:1585403-1585422 | None:intergenic | 20.0% |
| !!! | TAAGGATAATTTTGATGATA+TGG | + | chr6.1:1585405-1585424 | MS.gene82879:CDS | 20.0% |
| ! | AATGTTGATATTGAAGTGAA+CGG | + | chr6.1:1584869-1584888 | MS.gene82879:CDS | 25.0% |
| ! | TAGTTTAGCTGAAAATGTTA+TGG | + | chr6.1:1584472-1584491 | MS.gene82879:CDS | 25.0% |
| !! | ATATAAGTTACCTTGTTATG+AGG | + | chr6.1:1585759-1585778 | MS.gene82879:CDS | 25.0% |
| !!! | GATAATTTTGATGATATGGT+GGG | + | chr6.1:1585409-1585428 | MS.gene82879:CDS | 25.0% |
| AAAAATTCAGGAATCAAGGA+AGG | + | chr6.1:1585568-1585587 | MS.gene82879:CDS | 30.0% | |
| AAAAGGGTGAAAATTGTGAT+GGG | + | chr6.1:1585008-1585027 | MS.gene82879:CDS | 30.0% | |
| AACAAAGATGACAATTGTGA+TGG | + | chr6.1:1585115-1585134 | MS.gene82879:CDS | 30.0% | |
| ACAAAGATGACAATTGTGAT+GGG | + | chr6.1:1585116-1585135 | MS.gene82879:CDS | 30.0% | |
| AGATGTTGATGCAAAAGATA+AGG | + | chr6.1:1585966-1585985 | MS.gene82879:CDS | 30.0% | |
| AGTTTCAAAGTATAACAGTG+AGG | + | chr6.1:1586377-1586396 | MS.gene82879:CDS | 30.0% | |
| ATGTTGATATTGAAGTGAAC+GGG | + | chr6.1:1584870-1584889 | MS.gene82879:CDS | 30.0% | |
| GAAACAAAAGAATAGACTCT+TGG | + | chr6.1:1585327-1585346 | MS.gene82879:CDS | 30.0% | |
| TATTGATATTGCTAGTGTTC+TGG | + | chr6.1:1585684-1585703 | MS.gene82879:CDS | 30.0% | |
| TGATGAAAAAATTCAGACTG+TGG | + | chr6.1:1584820-1584839 | MS.gene82879:CDS | 30.0% | |
| TGATGCAAAAGATAAGGAAT+GGG | + | chr6.1:1585972-1585991 | MS.gene82879:CDS | 30.0% | |
| TGTGATAAGAAAGTCAAAGA+AGG | + | chr6.1:1584797-1584816 | MS.gene82879:CDS | 30.0% | |
| TTAAAAGGCTTCAATTGTGA+CGG | - | chr6.1:1585388-1585407 | None:intergenic | 30.0% | |
| TTGACGATTTGATTGATGAA+AGG | + | chr6.1:1585197-1585216 | MS.gene82879:CDS | 30.0% | |
| TTGATGCAAAAGATAAGGAA+TGG | + | chr6.1:1585971-1585990 | MS.gene82879:CDS | 30.0% | |
| ! | GACAAAAAACCCTTTTCATT+TGG | - | chr6.1:1586261-1586280 | None:intergenic | 30.0% |
| ! | GCGAATTTTTGACAGAATTT+CGG | - | chr6.1:1586499-1586518 | None:intergenic | 30.0% |
| ! | TCAGCTTTTTATCTCTCAAA+AGG | + | chr6.1:1585733-1585752 | MS.gene82879:CDS | 30.0% |
| !! | GGATAATTTTGATGATATGG+TGG | + | chr6.1:1585408-1585427 | MS.gene82879:CDS | 30.0% |
| !! | TCTTCTGAGATGAATAATGA+CGG | + | chr6.1:1584626-1584645 | MS.gene82879:CDS | 30.0% |
| !! | TGATTCTGAAGTGAATAATG+AGG | + | chr6.1:1584727-1584746 | MS.gene82879:CDS | 30.0% |
| AAAAAAAACAACGACGATGC+AGG | + | chr6.1:1586048-1586067 | MS.gene82879:CDS | 35.0% | |
| AAAAAAACAACGACGATGCA+GGG | + | chr6.1:1586049-1586068 | MS.gene82879:CDS | 35.0% | |
| ACTTTGATGGAACATTTGCT+TGG | + | chr6.1:1585356-1585375 | MS.gene82879:CDS | 35.0% | |
| CCGAAAGAACCAAATGAAAA+GGG | + | chr6.1:1586249-1586268 | MS.gene82879:CDS | 35.0% | |
| CTGGTTGCAATTAAGTCTAA+GGG | + | chr6.1:1586015-1586034 | MS.gene82879:CDS | 35.0% | |
| GAAAAGGGTGAAAATTGTGA+TGG | + | chr6.1:1585007-1585026 | MS.gene82879:CDS | 35.0% | |
| GACTATTGAGGATTCAATAG+TGG | + | chr6.1:1585147-1585166 | MS.gene82879:CDS | 35.0% | |
| GCTGAAAATGTTATGGTTGA+AGG | + | chr6.1:1584479-1584498 | MS.gene82879:CDS | 35.0% | |
| GGTGTCTTCTTTGTTGAAAA+CGG | + | chr6.1:1584748-1584767 | MS.gene82879:CDS | 35.0% | |
| GTGTCTTCTTTGTTGAAAAC+GGG | + | chr6.1:1584749-1584768 | MS.gene82879:CDS | 35.0% | |
| TATTGAGGATTCAATAGTGG+AGG | + | chr6.1:1585150-1585169 | MS.gene82879:CDS | 35.0% | |
| TCAATCAGAGACTTTGTGAA+GGG | + | chr6.1:1586327-1586346 | MS.gene82879:CDS | 35.0% | |
| TCTACCTTTGTCTTGAAATC+AGG | - | chr6.1:1587014-1587033 | None:intergenic | 35.0% | |
| TCTCTGATTGAAGTAGTGAA+AGG | - | chr6.1:1586318-1586337 | None:intergenic | 35.0% | |
| TCTGGTTGCAATTAAGTCTA+AGG | + | chr6.1:1586014-1586033 | MS.gene82879:CDS | 35.0% | |
| TCTTTCTTCTTGTCTTGTGA+AGG | - | chr6.1:1586870-1586889 | None:intergenic | 35.0% | |
| TGAAAAAATTGCGACTGTTG+AGG | + | chr6.1:1584919-1584938 | MS.gene82879:CDS | 35.0% | |
| TGATGTTGAGATGAATGAGA+AGG | + | chr6.1:1584970-1584989 | MS.gene82879:CDS | 35.0% | |
| TGTTCAAGAAGCTGTAAATG+AGG | + | chr6.1:1585462-1585481 | MS.gene82879:CDS | 35.0% | |
| TTCAATCAGAGACTTTGTGA+AGG | + | chr6.1:1586326-1586345 | MS.gene82879:CDS | 35.0% | |
| TTCTCACTTGTTTCCACTAT+TGG | - | chr6.1:1584947-1584966 | None:intergenic | 35.0% | |
| TTTGAAGGAGAATGATTCTC+AGG | + | chr6.1:1584571-1584590 | MS.gene82879:CDS | 35.0% | |
| ! | AAACTAGTTTCAACCCCAAA+TGG | - | chr6.1:1584458-1584477 | None:intergenic | 35.0% |
| ! | AACTCTTTTCTCTTCTGAAC+TGG | - | chr6.1:1586084-1586103 | None:intergenic | 35.0% |
| ! | AGTTCTCTCCTTTCTTTTCT+TGG | - | chr6.1:1586736-1586755 | None:intergenic | 35.0% |
| ! | GCTTTTTATCTCTCAAAAGG+AGG | + | chr6.1:1585736-1585755 | MS.gene82879:CDS | 35.0% |
| ! | GTCACAATTGAAGCCTTTTA+AGG | + | chr6.1:1585387-1585406 | MS.gene82879:CDS | 35.0% |
| ! | TACTTCCTGAACCTGATTTT+GGG | - | chr6.1:1585891-1585910 | None:intergenic | 35.0% |
| ! | TGCTTTTCTGCTTTCTTCTA+CGG | - | chr6.1:1585921-1585940 | None:intergenic | 35.0% |
| ! | TTGTCCTCCAGATTTTTCAT+CGG | - | chr6.1:1586820-1586839 | None:intergenic | 35.0% |
| ! | TTTCTGTTGGCGATTTTGTT+TGG | + | chr6.1:1585227-1585246 | MS.gene82879:CDS | 35.0% |
| !! | AAAAGCATCGCTGACATTAT+GGG | + | chr6.1:1585934-1585953 | MS.gene82879:CDS | 35.0% |
| !! | CTGTTATACTTTGAAACTCG+AGG | - | chr6.1:1586375-1586394 | None:intergenic | 35.0% |
| !! | TGTTTTCAAGACTGAGGTTT+CGG | + | chr6.1:1584547-1584566 | MS.gene82879:CDS | 35.0% |
| !! | TTCTGTTGGCGATTTTGTTT+GGG | + | chr6.1:1585228-1585247 | MS.gene82879:CDS | 35.0% |
| !!! | AGGGTTTTTTGTCAAGAGAA+AGG | + | chr6.1:1586268-1586287 | MS.gene82879:CDS | 35.0% |
| !!! | CCCTTTTCATTTGGTTCTTT+CGG | - | chr6.1:1586252-1586271 | None:intergenic | 35.0% |
| AACAGCATAGGTGAAAGCTT+TGG | - | chr6.1:1585446-1585465 | None:intergenic | 40.0% | |
| AAGAGAAAAGAGTTGCTTGC+AGG | + | chr6.1:1586090-1586109 | MS.gene82879:CDS | 40.0% | |
| AAGCTGTAAATGAGGTTGGA+AGG | + | chr6.1:1585470-1585489 | MS.gene82879:CDS | 40.0% | |
| AATGAGAAGGATAGTGAGGA+GGG | + | chr6.1:1584983-1585002 | MS.gene82879:CDS | 40.0% | |
| AATGATTCCCCGGTGAATAA+TGG | + | chr6.1:1584599-1584618 | MS.gene82879:CDS | 40.0% | |
| ACTGAATCGATGGAACCATT+TGG | + | chr6.1:1584440-1584459 | MS.gene82879:CDS | 40.0% | |
| ACTGATACAGAGACTGTAAG+AGG | + | chr6.1:1586114-1586133 | MS.gene82879:CDS | 40.0% | |
| ACTTGAGAAAGTAACTCAGC+CGG | - | chr6.1:1585646-1585665 | None:intergenic | 40.0% | |
| AGAAGTTCATTGTATCGCGA+AGG | + | chr6.1:1586594-1586613 | MS.gene82879:CDS | 40.0% | |
| AGCTGGAAATATTGAAGGCT+CGG | + | chr6.1:1585707-1585726 | MS.gene82879:CDS | 40.0% | |
| AGCTGTAAATGAGGTTGGAA+GGG | + | chr6.1:1585471-1585490 | MS.gene82879:CDS | 40.0% | |
| AGGGTTTCTTTCTCATCATC+TGG | - | chr6.1:1586447-1586466 | None:intergenic | 40.0% | |
| ATATCACCTAGCGAAGATTC+TGG | + | chr6.1:1586705-1586724 | MS.gene82879:CDS | 40.0% | |
| ATCGCCTGATTTCAAGACAA+AGG | + | chr6.1:1587007-1587026 | MS.gene82879:CDS | 40.0% | |
| ATGATTCCCCGGTGAATAAT+GGG | + | chr6.1:1584600-1584619 | MS.gene82879:CDS | 40.0% | |
| CAAGAAGCTGTAAATGAGGT+TGG | + | chr6.1:1585466-1585485 | MS.gene82879:CDS | 40.0% | |
| CCAATGTTGGCGAAAAATTC+AGG | + | chr6.1:1585556-1585575 | MS.gene82879:CDS | 40.0% | |
| CGATGTTGAAATGACTGAGA+AGG | + | chr6.1:1585078-1585097 | MS.gene82879:CDS | 40.0% | |
| CTGAATCGATGGAACCATTT+GGG | + | chr6.1:1584441-1584460 | MS.gene82879:CDS | 40.0% | |
| CTGATTGAAGTAGTGAAAGG+AGG | - | chr6.1:1586315-1586334 | None:intergenic | 40.0% | |
| CTTCTTGTCTTGTGAAGGTT+TGG | - | chr6.1:1586865-1586884 | None:intergenic | 40.0% | |
| CTTGACTTTCTCTGGATCAA+GGG | - | chr6.1:1586466-1586485 | None:intergenic | 40.0% | |
| CTTTCTCATCATCTGGTGTT+TGG | - | chr6.1:1586440-1586459 | None:intergenic | 40.0% | |
| GAAAGATTAAGAGTCATCCG+TGG | + | chr6.1:1585251-1585270 | MS.gene82879:CDS | 40.0% | |
| GAATACAATGAAGCTGAACC+TGG | + | chr6.1:1586630-1586649 | MS.gene82879:CDS | 40.0% | |
| GACGATCAACTTAGATGTCT+CGG | - | chr6.1:1586934-1586953 | None:intergenic | 40.0% | |
| GATGAATGAGAAGGATAGTG+AGG | + | chr6.1:1584979-1584998 | MS.gene82879:CDS | 40.0% | |
| GATTGATCAAGCTCAGATTC+TGG | - | chr6.1:1586678-1586697 | None:intergenic | 40.0% | |
| GCCGAAAGAACCAAATGAAA+AGG | + | chr6.1:1586248-1586267 | MS.gene82879:CDS | 40.0% | |
| GGCGAAAAATTCAGGAATCA+AGG | + | chr6.1:1585564-1585583 | MS.gene82879:CDS | 40.0% | |
| GTAGAGTAGTCCTCTTCAAA+CGG | - | chr6.1:1585856-1585875 | None:intergenic | 40.0% | |
| GTCATACAGCAGAAACTTCA+AGG | + | chr6.1:1586951-1586970 | MS.gene82879:CDS | 40.0% | |
| TACAGCTTCTTGAACAGCAT+AGG | - | chr6.1:1585458-1585477 | None:intergenic | 40.0% | |
| TAGTCCACAAATGTCAAGGA+GGG | + | chr6.1:1586530-1586549 | MS.gene82879:CDS | 40.0% | |
| TGAATCGATGGAACCATTTG+GGG | + | chr6.1:1584442-1584461 | MS.gene82879:CDS | 40.0% | |
| TGATATTGAAGTGAACGGGA+AGG | + | chr6.1:1584874-1584893 | MS.gene82879:CDS | 40.0% | |
| TGGAAAAGAAAGCTGTGACA+GGG | + | chr6.1:1586137-1586156 | MS.gene82879:CDS | 40.0% | |
| TGGGAAGATAGAGTCTATTG+AGG | + | chr6.1:1585027-1585046 | MS.gene82879:CDS | 40.0% | |
| TTAGTCCACAAATGTCAAGG+AGG | + | chr6.1:1586529-1586548 | MS.gene82879:CDS | 40.0% | |
| TTCTCGCTTATCTCCACAAT+TGG | - | chr6.1:1584851-1584870 | None:intergenic | 40.0% | |
| TTCTGCTTTCTTCTACGGTT+CGG | - | chr6.1:1585916-1585935 | None:intergenic | 40.0% | |
| TTGAAAACGGGAGAAAACGA+TGG | + | chr6.1:1584761-1584780 | MS.gene82879:CDS | 40.0% | |
| TTGTTATGAGGATCCCAAAC+GGG | + | chr6.1:1585771-1585790 | MS.gene82879:CDS | 40.0% | |
| TTTGAAGGAGAATGACTCTC+AGG | + | chr6.1:1584697-1584716 | MS.gene82879:CDS | 40.0% | |
| TTTGACAGAATTTCGGCTGA+AGG | - | chr6.1:1586492-1586511 | None:intergenic | 40.0% | |
| TTTGGAGGATGTGAACAACA+TGG | + | chr6.1:1587052-1587071 | MS.gene82879:CDS | 40.0% | |
| ! | ACTTCCTGAACCTGATTTTG+GGG | - | chr6.1:1585890-1585909 | None:intergenic | 40.0% |
| ! | CCTGAATTTTTCGCCAACAT+TGG | - | chr6.1:1585559-1585578 | None:intergenic | 40.0% |
| ! | CTACTTCCTGAACCTGATTT+TGG | - | chr6.1:1585892-1585911 | None:intergenic | 40.0% |
| ! | CTCTTGGTAGCTTACTTTGA+TGG | + | chr6.1:1585343-1585362 | MS.gene82879:CDS | 40.0% |
| ! | CTTGTTATGAGGATCCCAAA+CGG | + | chr6.1:1585770-1585789 | MS.gene82879:CDS | 40.0% |
| ! | GACTGAGGTTTCGATTTTGA+AGG | + | chr6.1:1584682-1584701 | MS.gene82879:CDS | 40.0% |
| ! | GTCTATTGAGGTACCAATAG+TGG | + | chr6.1:1585039-1585058 | MS.gene82879:CDS | 40.0% |
| ! | TATTGAGGTACCAATAGTGG+AGG | + | chr6.1:1585042-1585061 | MS.gene82879:CDS | 40.0% |
| ! | TCTGGAGCTGGAAATATTGA+AGG | + | chr6.1:1585702-1585721 | MS.gene82879:CDS | 40.0% |
| ! | TCTGGTAATGAGAACATCAG+CGG | + | chr6.1:1586195-1586214 | MS.gene82879:CDS | 40.0% |
| ! | TGCAAGTGATGATGAAGTTC+TGG | + | chr6.1:1585996-1586015 | MS.gene82879:CDS | 40.0% |
| ! | TGTGGTTGATACTGAATCGA+TGG | + | chr6.1:1584430-1584449 | MS.gene82879:CDS | 40.0% |
| ! | TTTGATGATATGGTGGGACA+AGG | + | chr6.1:1585415-1585434 | MS.gene82879:CDS | 40.0% |
| !! | AAAGCATCGCTGACATTATG+GGG | + | chr6.1:1585935-1585954 | MS.gene82879:CDS | 40.0% |
| !! | GAAAAGCATCGCTGACATTA+TGG | + | chr6.1:1585933-1585952 | MS.gene82879:CDS | 40.0% |
| !! | GAAAGGTGTGACTTTTCTGT+TGG | + | chr6.1:1585214-1585233 | MS.gene82879:CDS | 40.0% |
| !! | GAGTAGTGTTTTCAAGACTG+AGG | + | chr6.1:1584541-1584560 | MS.gene82879:CDS | 40.0% |
| !! | TCTGTTGGCGATTTTGTTTG+GGG | + | chr6.1:1585229-1585248 | MS.gene82879:CDS | 40.0% |
| AAGACACCCCATTATTCACC+GGG | - | chr6.1:1584610-1584629 | None:intergenic | 45.0% | |
| AAGGGGACCGATGAAAAATC+TGG | + | chr6.1:1586810-1586829 | MS.gene82879:CDS | 45.0% | |
| AATGAAGCTGAACCTGGAAC+TGG | + | chr6.1:1586636-1586655 | MS.gene82879:CDS | 45.0% | |
| ACAGCAGAAACTTCAAGGTC+TGG | + | chr6.1:1586956-1586975 | MS.gene82879:CDS | 45.0% | |
| AGAGACTTTGTGAAGGGAAG+AGG | + | chr6.1:1586333-1586352 | MS.gene82879:CDS | 45.0% | |
| AGATTAAGAGTCATCCGTGG+TGG | + | chr6.1:1585254-1585273 | MS.gene82879:CDS | 45.0% | |
| AGTCCACAAATGTCAAGGAG+GGG | + | chr6.1:1586531-1586550 | MS.gene82879:CDS | 45.0% | |
| CCTTGACTTTCTCTGGATCA+AGG | - | chr6.1:1586467-1586486 | None:intergenic | 45.0% | |
| CCTTGATCCAGAGAAAGTCA+AGG | + | chr6.1:1586464-1586483 | MS.gene82879:CDS | 45.0% | |
| CGCTTAGTCCACAAATGTCA+AGG | + | chr6.1:1586526-1586545 | MS.gene82879:CDS | 45.0% | |
| GAAATCAGGCGATTTGTCGT+CGG | - | chr6.1:1587000-1587019 | None:intergenic | 45.0% | |
| GAAGACACCCCATTATTCAC+CGG | - | chr6.1:1584611-1584630 | None:intergenic | 45.0% | |
| GAAGGAACCTTGACTTTCTC+TGG | - | chr6.1:1586474-1586493 | None:intergenic | 45.0% | |
| GAATGAGAAGGATAGTGAGG+AGG | + | chr6.1:1584982-1585001 | MS.gene82879:CDS | 45.0% | |
| GACTGTGGAGATTCCAATTG+TGG | + | chr6.1:1584835-1584854 | MS.gene82879:CDS | 45.0% | |
| GACTGTTGAGGTTCCAATAG+TGG | + | chr6.1:1584931-1584950 | MS.gene82879:CDS | 45.0% | |
| GATACAGAGACTGTAAGAGG+TGG | + | chr6.1:1586117-1586136 | MS.gene82879:CDS | 45.0% | |
| GATAGTGAGGAGGGAGAAAA+GGG | + | chr6.1:1584992-1585011 | MS.gene82879:CDS | 45.0% | |
| GCAGGAGAAGAATGAGCTTA+AGG | + | chr6.1:1584508-1584527 | MS.gene82879:CDS | 45.0% | |
| GGAAAAGAAAGCTGTGACAG+GGG | + | chr6.1:1586138-1586157 | MS.gene82879:CDS | 45.0% | |
| GGTGAGGAAAAAGAAGCTTC+TGG | + | chr6.1:1586177-1586196 | MS.gene82879:CDS | 45.0% | |
| GTAATGAGAACATCAGCGGT+GGG | + | chr6.1:1586199-1586218 | MS.gene82879:CDS | 45.0% | |
| GTCTGAATTCGCTCCAATGT+TGG | + | chr6.1:1585543-1585562 | MS.gene82879:CDS | 45.0% | |
| GTGGAAAAGAAAGCTGTGAC+AGG | + | chr6.1:1586136-1586155 | MS.gene82879:CDS | 45.0% | |
| TATGGTTGAAGGTTCAGAGC+AGG | + | chr6.1:1584490-1584509 | MS.gene82879:CDS | 45.0% | |
| TGATTCCCCGGTGAATAATG+GGG | + | chr6.1:1584601-1584620 | MS.gene82879:CDS | 45.0% | |
| TGGACCAGCCAAGAAAAGAA+AGG | + | chr6.1:1586725-1586744 | MS.gene82879:CDS | 45.0% | |
| TGGGAAGATCGAGACTATTG+AGG | + | chr6.1:1585135-1585154 | MS.gene82879:CDS | 45.0% | |
| TTATGATCCGTCTGATGCGT+CGG | + | chr6.1:1585288-1585307 | MS.gene82879:CDS | 45.0% | |
| TTGAAACTCGAGGAGAAAGC+AGG | - | chr6.1:1586365-1586384 | None:intergenic | 45.0% | |
| TTGACCCCAAAATCAGGTTC+AGG | + | chr6.1:1585883-1585902 | MS.gene82879:CDS | 45.0% | |
| TTTCTCTTCCTTCCAGTTCC+AGG | - | chr6.1:1586651-1586670 | None:intergenic | 45.0% | |
| ! | AAGCATCGCTGACATTATGG+GGG | + | chr6.1:1585936-1585955 | MS.gene82879:CDS | 45.0% |
| ! | AAGGCTTCAATTGTGACGGA+TGG | - | chr6.1:1585384-1585403 | None:intergenic | 45.0% |
| ! | CAGTGAGGCATTTCAAGAGT+TGG | + | chr6.1:1586392-1586411 | MS.gene82879:CDS | 45.0% |
| ! | CGTTTGGGATCCTCATAACA+AGG | - | chr6.1:1585772-1585791 | None:intergenic | 45.0% |
| ! | CTCTCCTTTCTTTTCTTGGC+TGG | - | chr6.1:1586732-1586751 | None:intergenic | 45.0% |
| ! | TCAGGTTGTGAATGATTCCC+CGG | + | chr6.1:1584589-1584608 | MS.gene82879:CDS | 45.0% |
| !! | GACTGAGGTTTCGGTTTTGA+AGG | + | chr6.1:1584556-1584575 | MS.gene82879:CDS | 45.0% |
| !! | GGTGTTTTTGTGCCTGATAG+TGG | + | chr6.1:1585589-1585608 | MS.gene82879:CDS | 45.0% |
| !! | TAGTGGCACAGAGAGCATTT+CGG | + | chr6.1:1585606-1585625 | MS.gene82879:CDS | 45.0% |
| !! | TATTGCTAGTGTTCTGGAGC+TGG | + | chr6.1:1585690-1585709 | MS.gene82879:CDS | 45.0% |
| !!! | GAACCTGATTTTGGGGTCAA+TGG | - | chr6.1:1585883-1585902 | None:intergenic | 45.0% |
| AACGGGAAGGAGAATGAGGA+GGG | + | chr6.1:1584887-1584906 | MS.gene82879:CDS | 50.0% | |
| AAGCTGAACCTGGAACTGGA+AGG | + | chr6.1:1586640-1586659 | MS.gene82879:CDS | 50.0% | |
| AAGGTAGAGAGCGAGGTGAA+AGG | + | chr6.1:1587026-1587045 | MS.gene82879:CDS | 50.0% | |
| AATGACTGAGAAGGAGAGCG+CGG | + | chr6.1:1585087-1585106 | MS.gene82879:CDS | 50.0% | |
| AGACACCCCATTATTCACCG+GGG | - | chr6.1:1584609-1584628 | None:intergenic | 50.0% | |
| AGCGGAGAGGAAAACGATGA+AGG | + | chr6.1:1586222-1586241 | MS.gene82879:CDS | 50.0% | |
| AGTGAACGGGAAGGAGAATG+AGG | + | chr6.1:1584883-1584902 | MS.gene82879:CDS | 50.0% | |
| CAAATCGCAGCATTCAGGTG+AGG | + | chr6.1:1586161-1586180 | MS.gene82879:CDS | 50.0% | |
| CAAGACAAAGGTAGAGAGCG+AGG | + | chr6.1:1587019-1587038 | MS.gene82879:CDS | 50.0% | |
| CTCTCACTTGCCTCCACTAT+TGG | - | chr6.1:1585055-1585074 | None:intergenic | 50.0% | |
| CTGCCATTGACCCCAAAATC+AGG | + | chr6.1:1585877-1585896 | MS.gene82879:CDS | 50.0% | |
| GCGGAGAGGAAAACGATGAA+GGG | + | chr6.1:1586223-1586242 | MS.gene82879:CDS | 50.0% | |
| GGATAGTGAGGAGGGAGAAA+AGG | + | chr6.1:1584991-1585010 | MS.gene82879:CDS | 50.0% | |
| GGGACCGATGAAAAATCTGG+AGG | + | chr6.1:1586813-1586832 | MS.gene82879:CDS | 50.0% | |
| GGTAATGAGAACATCAGCGG+TGG | + | chr6.1:1586198-1586217 | MS.gene82879:CDS | 50.0% | |
| TCAAGTCCGAGAACCCGTTT+GGG | - | chr6.1:1585787-1585806 | None:intergenic | 50.0% | |
| TTCAAGTCCGAGAACCCGTT+TGG | - | chr6.1:1585788-1585807 | None:intergenic | 50.0% | |
| TTCGGCGGTTACACTTGAAC+CGG | + | chr6.1:1585624-1585643 | MS.gene82879:CDS | 50.0% | |
| ! | AAATGAGGTTGGAAGGGTGC+TGG | + | chr6.1:1585477-1585496 | MS.gene82879:CDS | 50.0% |
| ! | ATGCTCTCTGTGCCACTATC+AGG | - | chr6.1:1585604-1585623 | None:intergenic | 50.0% |
| ! | CAGTTGAAGCACCATCCCAA+GGG | + | chr6.1:1585830-1585849 | MS.gene82879:CDS | 50.0% |
| ! | CGAGGTGAAAGGTCTTTTGG+AGG | + | chr6.1:1587037-1587056 | MS.gene82879:CDS | 50.0% |
| ! | GAGCGAGGTGAAAGGTCTTT+TGG | + | chr6.1:1587034-1587053 | MS.gene82879:CDS | 50.0% |
| ! | GATGAGTCGTCCGTTTGTTG+TGG | + | chr6.1:1585507-1585526 | MS.gene82879:CDS | 50.0% |
| ! | TTTGTGAAGGGAAGAGGTGC+TGG | + | chr6.1:1586339-1586358 | MS.gene82879:CDS | 50.0% |
| !! | GAGTAGCGTTTTCGAGACTG+AGG | + | chr6.1:1584667-1584686 | MS.gene82879:CDS | 50.0% |
| AACCAAGACCAGCGGCAAGA+AGG | + | chr6.1:1586791-1586810 | MS.gene82879:CDS | 55.0% | |
| ACCAAGACCAGCGGCAAGAA+GGG | + | chr6.1:1586792-1586811 | MS.gene82879:CDS | 55.0% | |
| ACCCTGTGACAGAGATGGTG+TGG | - | chr6.1:1586910-1586929 | None:intergenic | 55.0% | |
| ACGGGAAGGAGAATGAGGAG+GGG | + | chr6.1:1584888-1584907 | MS.gene82879:CDS | 55.0% | |
| AGCCACACCATCTCTGTCAC+AGG | + | chr6.1:1586905-1586924 | MS.gene82879:CDS | 55.0% | |
| AGGGGCAAATCGCAGCATTC+AGG | + | chr6.1:1586156-1586175 | MS.gene82879:CDS | 55.0% | |
| AGTCCTCTTCAAACGGCCCT+TGG | - | chr6.1:1585849-1585868 | None:intergenic | 55.0% | |
| AGTGGAGGCTAGTGAGAGCA+TGG | + | chr6.1:1585165-1585184 | MS.gene82879:CDS | 55.0% | |
| ATCCCAAGGGCCGTTTGAAG+AGG | + | chr6.1:1585843-1585862 | MS.gene82879:CDS | 55.0% | |
| CATCGCTGACATTATGGGGG+AGG | + | chr6.1:1585939-1585958 | MS.gene82879:CDS | 55.0% | |
| GAACGGGAAGGAGAATGAGG+AGG | + | chr6.1:1584886-1584905 | MS.gene82879:CDS | 55.0% | |
| GACGGATCATAAACCCGACC+TGG | - | chr6.1:1585280-1585299 | None:intergenic | 55.0% | |
| GAGATGGTGTGGCTGGAGTT+AGG | - | chr6.1:1586899-1586918 | None:intergenic | 55.0% | |
| GCAAGTTCCGACGCATCAGA+CGG | - | chr6.1:1585298-1585317 | None:intergenic | 55.0% | |
| GCCACACCATCTCTGTCACA+GGG | + | chr6.1:1586906-1586925 | MS.gene82879:CDS | 55.0% | |
| GCTCGTGAAACCAAGACCAG+CGG | + | chr6.1:1586783-1586802 | MS.gene82879:CDS | 55.0% | |
| GCTGGTCCAGAATCTTCGCT+AGG | - | chr6.1:1586714-1586733 | None:intergenic | 55.0% | |
| GTCCTCTTCAAACGGCCCTT+GGG | - | chr6.1:1585848-1585867 | None:intergenic | 55.0% | |
| GTGCCCCTCCTTGACATTTG+TGG | - | chr6.1:1586537-1586556 | None:intergenic | 55.0% | |
| TCGGTACCCTGTGACAGAGA+TGG | - | chr6.1:1586915-1586934 | None:intergenic | 55.0% | |
| TCTTCAAACGGCCCTTGGGA+TGG | - | chr6.1:1585844-1585863 | None:intergenic | 55.0% | |
| TGTGACAGAGATGGTGTGGC+TGG | - | chr6.1:1586906-1586925 | None:intergenic | 55.0% | |
| ! | GAGGATCCCAAACGGGTTCT+CGG | + | chr6.1:1585778-1585797 | MS.gene82879:CDS | 55.0% |
| ! | GCAGTTGAAGCACCATCCCA+AGG | + | chr6.1:1585829-1585848 | MS.gene82879:CDS | 55.0% |
| !! | AGTCGTCCGTTTGTTGTGGC+GGG | + | chr6.1:1585511-1585530 | MS.gene82879:CDS | 55.0% |
| !! | GAGTCGTCCGTTTGTTGTGG+CGG | + | chr6.1:1585510-1585529 | MS.gene82879:CDS | 55.0% |
| !! | TGGCACAGAGAGCATTTCGG+CGG | + | chr6.1:1585609-1585628 | MS.gene82879:CDS | 55.0% |
| AAGAGTCATCCGTGGTGGCC+AGG | + | chr6.1:1585259-1585278 | MS.gene82879:CDS | 60.0% | |
| CCAAGACCAGCGGCAAGAAG+GGG | + | chr6.1:1586793-1586812 | MS.gene82879:CDS | 60.0% | |
| GAGAACATCAGCGGTGGGAG+CGG | + | chr6.1:1586204-1586223 | MS.gene82879:CDS | 60.0% | |
| GTCTCCCCCGCCACAACAAA+CGG | - | chr6.1:1585520-1585539 | None:intergenic | 60.0% | |
| TAAACCCGACCTGGCCACCA+CGG | - | chr6.1:1585271-1585290 | None:intergenic | 60.0% | |
| ! | ACTGAGAAGGAGAGCGCGGA+AGG | + | chr6.1:1585091-1585110 | MS.gene82879:CDS | 60.0% |
| !! | GTCGTCCGTTTGTTGTGGCG+GGG | + | chr6.1:1585512-1585531 | MS.gene82879:CDS | 60.0% |
| !! | TCGTCCGTTTGTTGTGGCGG+GGG | + | chr6.1:1585513-1585532 | MS.gene82879:CDS | 60.0% |
| ATCGGTCCCCTTCTTGCCGC+TGG | - | chr6.1:1586802-1586821 | None:intergenic | 65.0% | |
| GTCATCCGTGGTGGCCAGGT+CGG | + | chr6.1:1585263-1585282 | MS.gene82879:CDS | 65.0% | |
| TCATCCGTGGTGGCCAGGTC+GGG | + | chr6.1:1585264-1585283 | MS.gene82879:CDS | 65.0% | |
| ! | CCCCTTCTTGCCGCTGGTCT+TGG | - | chr6.1:1586796-1586815 | None:intergenic | 65.0% |
| CATCAGCGGTGGGAGCGGAG+AGG | + | chr6.1:1586209-1586228 | MS.gene82879:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 1584425 | 1587094 | 1584425 | ID=MS.gene82879 |
| chr6.1 | mRNA | 1584425 | 1587094 | 1584425 | ID=MS.gene82879.t1;Parent=MS.gene82879 |
| chr6.1 | exon | 1584425 | 1587094 | 1584425 | ID=MS.gene82879.t1.exon1;Parent=MS.gene82879.t1 |
| chr6.1 | CDS | 1584425 | 1587094 | 1584425 | ID=cds.MS.gene82879.t1;Parent=MS.gene82879.t1 |
| Gene Sequence |
| Protein sequence |
