AlfalfaGEDB | MS.gene064070

M. sativa cultivar XinJiangDaYe / MS.gene064070

KEGG: K03945
GO: -
PFAM: PF15879.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064070.t1	XP_003626648.1	100	64	0	0	1	64	1	64	6.50E-29	136

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064070.t1	Q9C9Z5	77.4	62	14	0	1	62	1	62	2.1e-23	109.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064070.t1	Q1STQ6	100.0	64	0	0	1	64	1	64	4.7e-29	136.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene064070	0.838736	2.41E-57	-1.69E-46
MS.gene049159	MS.gene064070	0.898615	4.46E-77	-1.69E-46
MS.gene049255	MS.gene064070	0.832182	1.09E-55	-1.69E-46
MS.gene049341	MS.gene064070	0.846723	1.82E-59	-1.69E-46
MS.gene049382	MS.gene064070	0.829854	4.08E-55	-1.69E-46
MS.gene049404	MS.gene064070	0.815866	7.42E-52	-1.69E-46
MS.gene049435	MS.gene064070	0.809109	2.23E-50	-1.69E-46
MS.gene049501	MS.gene064070	0.843018	1.81E-58	-1.69E-46
MS.gene049756	MS.gene064070	0.800815	1.21E-48	-1.69E-46
MS.gene049821	MS.gene064070	0.830473	2.88E-55	-1.69E-46
MS.gene04984	MS.gene064070	0.806939	6.45E-50	-1.69E-46
MS.gene049850	MS.gene064070	0.819011	1.45E-52	-1.69E-46
MS.gene050020	MS.gene064070	0.834271	3.30E-56	-1.69E-46
MS.gene050277	MS.gene064070	0.81346	2.53E-51	-1.69E-46
MS.gene050303	MS.gene064070	0.812887	3.38E-51	-1.69E-46
MS.gene050438	MS.gene064070	0.81293	3.31E-51	-1.69E-46
MS.gene050442	MS.gene064070	0.839877	1.22E-57	-1.69E-46
MS.gene05045	MS.gene064070	0.801684	8.02E-49	-1.69E-46
MS.gene050586	MS.gene064070	0.809554	1.79E-50	-1.69E-46
MS.gene050689	MS.gene064070	0.831708	1.43E-55	-1.69E-46
MS.gene050719	MS.gene064070	0.834132	3.58E-56	-1.69E-46
MS.gene050721	MS.gene064070	0.836044	1.18E-56	-1.69E-46
MS.gene050724	MS.gene064070	0.841798	3.82E-58	-1.69E-46
MS.gene050780	MS.gene064070	0.804174	2.45E-49	-1.69E-46
MS.gene050807	MS.gene064070	0.84996	2.31E-60	-1.69E-46
MS.gene050808	MS.gene064070	0.823993	1.03E-53	-1.69E-46
MS.gene050815	MS.gene064070	0.877254	7.28E-69	-1.69E-46
MS.gene050826	MS.gene064070	0.804737	1.87E-49	-1.69E-46
MS.gene050844	MS.gene064070	0.839551	1.48E-57	-1.69E-46
MS.gene051102	MS.gene064070	0.808317	3.29E-50	-1.69E-46
MS.gene051180	MS.gene064070	0.821114	4.80E-53	-1.69E-46
MS.gene051198	MS.gene064070	0.814663	1.37E-51	-1.69E-46
MS.gene051243	MS.gene064070	0.845511	3.88E-59	-1.69E-46
MS.gene051247	MS.gene064070	0.828808	7.32E-55	-1.69E-46
MS.gene051265	MS.gene064070	0.804391	2.21E-49	-1.69E-46
MS.gene051328	MS.gene064070	0.87563	2.65E-68	-1.69E-46
MS.gene051344	MS.gene064070	0.808825	2.56E-50	-1.69E-46
MS.gene05134	MS.gene064070	0.837445	5.18E-57	-1.69E-46
MS.gene051388	MS.gene064070	0.80737	5.23E-50	-1.69E-46
MS.gene051452	MS.gene064070	0.80821	3.46E-50	-1.69E-46
MS.gene051577	MS.gene064070	0.817128	3.87E-52	-1.69E-46
MS.gene05157	MS.gene064070	0.827568	1.46E-54	-1.69E-46
MS.gene051719	MS.gene064070	0.815699	8.09E-52	-1.69E-46
MS.gene051720	MS.gene064070	0.80671	7.21E-50	-1.69E-46
MS.gene051744	MS.gene064070	0.809688	1.67E-50	-1.69E-46
MS.gene051757	MS.gene064070	0.837733	4.37E-57	-1.69E-46
MS.gene05188	MS.gene064070	0.802467	5.53E-49	-1.69E-46
MS.gene051975	MS.gene064070	0.802583	5.24E-49	-1.69E-46
MS.gene052012	MS.gene064070	0.842793	2.08E-58	-1.69E-46
MS.gene052020	MS.gene064070	0.835924	1.26E-56	-1.69E-46
MS.gene052133	MS.gene064070	0.820775	5.74E-53	-1.69E-46
MS.gene05215	MS.gene064070	0.801294	9.63E-49	-1.69E-46
MS.gene052286	MS.gene064070	0.805806	1.12E-49	-1.69E-46
MS.gene052376	MS.gene064070	0.815324	9.80E-52	-1.69E-46
MS.gene052397	MS.gene064070	0.809804	1.58E-50	-1.69E-46
MS.gene052426	MS.gene064070	0.817564	3.09E-52	-1.69E-46
MS.gene052516	MS.gene064070	0.847533	1.09E-59	-1.69E-46
MS.gene052519	MS.gene064070	0.80231	5.96E-49	-1.69E-46
MS.gene052611	MS.gene064070	0.837299	5.64E-57	-1.69E-46
MS.gene052665	MS.gene064070	0.844292	8.27E-59	-1.69E-46
MS.gene052773	MS.gene064070	0.815167	1.06E-51	-1.69E-46
MS.gene052860	MS.gene064070	0.800053	1.73E-48	-1.69E-46
MS.gene052863	MS.gene064070	0.858799	6.43E-63	-1.69E-46
MS.gene052879	MS.gene064070	0.80251	5.42E-49	-1.69E-46
MS.gene05288	MS.gene064070	0.838369	3.00E-57	-1.69E-46
MS.gene052896	MS.gene064070	0.828709	7.73E-55	-1.69E-46
MS.gene05289	MS.gene064070	0.827126	1.86E-54	-1.69E-46
MS.gene053008	MS.gene064070	0.880209	6.63E-70	-1.69E-46
MS.gene053074	MS.gene064070	0.838868	2.23E-57	-1.69E-46
MS.gene053216	MS.gene064070	0.813004	3.19E-51	-1.69E-46
MS.gene053226	MS.gene064070	0.832484	9.21E-56	-1.69E-46
MS.gene053581	MS.gene064070	0.806493	8.01E-50	-1.69E-46
MS.gene053630	MS.gene064070	0.813943	1.98E-51	-1.69E-46
MS.gene05364	MS.gene064070	0.808116	3.63E-50	-1.69E-46
MS.gene054185	MS.gene064070	0.802239	6.16E-49	-1.69E-46
MS.gene054236	MS.gene064070	0.833587	4.89E-56	-1.69E-46
MS.gene054472	MS.gene064070	0.865079	7.66E-65	-1.69E-46
MS.gene054596	MS.gene064070	0.801179	1.02E-48	-1.69E-46
MS.gene05462	MS.gene064070	0.822795	1.96E-53	-1.69E-46
MS.gene054651	MS.gene064070	0.815614	8.45E-52	-1.69E-46
MS.gene054658	MS.gene064070	0.815614	8.45E-52	-1.69E-46
MS.gene05468	MS.gene064070	0.819341	1.22E-52	-1.69E-46
MS.gene054775	MS.gene064070	0.815352	9.66E-52	-1.69E-46
MS.gene054823	MS.gene064070	0.802701	4.95E-49	-1.69E-46
MS.gene05510	MS.gene064070	0.829745	4.34E-55	-1.69E-46
MS.gene05517	MS.gene064070	0.8218	3.33E-53	-1.69E-46
MS.gene055227	MS.gene064070	0.80362	3.20E-49	-1.69E-46
MS.gene055363	MS.gene064070	0.83294	7.10E-56	-1.69E-46
MS.gene055465	MS.gene064070	0.833524	5.08E-56	-1.69E-46
MS.gene055466	MS.gene064070	0.856179	3.83E-62	-1.69E-46
MS.gene055468	MS.gene064070	0.848356	6.46E-60	-1.69E-46
MS.gene055512	MS.gene064070	0.833615	4.82E-56	-1.69E-46
MS.gene055608	MS.gene064070	0.87307	1.96E-67	-1.69E-46
MS.gene055623	MS.gene064070	0.860063	2.68E-63	-1.69E-46
MS.gene055818	MS.gene064070	0.838858	2.24E-57	-1.69E-46
MS.gene055926	MS.gene064070	0.826667	2.39E-54	-1.69E-46
MS.gene05604	MS.gene064070	0.813343	2.69E-51	-1.69E-46
MS.gene056173	MS.gene064070	0.8013	9.61E-49	-1.69E-46
MS.gene056174	MS.gene064070	0.803761	2.99E-49	-1.69E-46
MS.gene056215	MS.gene064070	0.810341	1.21E-50	-1.69E-46
MS.gene056506	MS.gene064070	0.801922	7.16E-49	-1.69E-46
MS.gene056553	MS.gene064070	0.83681	7.52E-57	-1.69E-46
MS.gene056595	MS.gene064070	0.807001	6.25E-50	-1.69E-46
MS.gene056631	MS.gene064070	0.810901	9.16E-51	-1.69E-46
MS.gene056760	MS.gene064070	0.84758	1.06E-59	-1.69E-46
MS.gene056784	MS.gene064070	0.825641	4.20E-54	-1.69E-46
MS.gene056908	MS.gene064070	0.809151	2.18E-50	-1.69E-46
MS.gene057057	MS.gene064070	0.817047	4.04E-52	-1.69E-46
MS.gene057060	MS.gene064070	0.82063	6.20E-53	-1.69E-46
MS.gene057140	MS.gene064070	0.859715	3.41E-63	-1.69E-46
MS.gene057394	MS.gene064070	0.800566	1.36E-48	-1.69E-46
MS.gene057444	MS.gene064070	0.828227	1.01E-54	-1.69E-46
MS.gene057446	MS.gene064070	0.82053	6.53E-53	-1.69E-46
MS.gene057693	MS.gene064070	0.858313	8.98E-63	-1.69E-46
MS.gene057869	MS.gene064070	0.836196	1.08E-56	-1.69E-46
MS.gene057915	MS.gene064070	0.844122	9.19E-59	-1.69E-46
MS.gene058010	MS.gene064070	0.853929	1.73E-61	-1.69E-46
MS.gene058037	MS.gene064070	0.801133	1.04E-48	-1.69E-46
MS.gene058054	MS.gene064070	0.815706	8.06E-52	-1.69E-46
MS.gene058055	MS.gene064070	0.833092	6.50E-56	-1.69E-46
MS.gene058084	MS.gene064070	0.838331	3.06E-57	-1.69E-46
MS.gene058146	MS.gene064070	0.826301	2.92E-54	-1.69E-46
MS.gene058168	MS.gene064070	0.838378	2.98E-57	-1.69E-46
MS.gene058339	MS.gene064070	0.812264	4.63E-51	-1.69E-46
MS.gene058399	MS.gene064070	0.805841	1.10E-49	-1.69E-46
MS.gene05847	MS.gene064070	0.829548	4.84E-55	-1.69E-46
MS.gene058548	MS.gene064070	0.81965	1.04E-52	-1.69E-46
MS.gene058549	MS.gene064070	0.807423	5.09E-50	-1.69E-46
MS.gene058595	MS.gene064070	0.840144	1.04E-57	-1.69E-46
MS.gene058625	MS.gene064070	0.816422	5.58E-52	-1.69E-46
MS.gene058646	MS.gene064070	0.803533	3.33E-49	-1.69E-46
MS.gene058783	MS.gene064070	0.810512	1.11E-50	-1.69E-46
MS.gene058906	MS.gene064070	0.858008	1.11E-62	-1.69E-46
MS.gene058979	MS.gene064070	0.820294	7.40E-53	-1.69E-46
MS.gene059006	MS.gene064070	0.810743	9.90E-51	-1.69E-46
MS.gene059124	MS.gene064070	0.828116	1.07E-54	-1.69E-46
MS.gene059151	MS.gene064070	0.82518	5.40E-54	-1.69E-46
MS.gene059249	MS.gene064070	0.817173	3.78E-52	-1.69E-46
MS.gene059283	MS.gene064070	0.811265	7.63E-51	-1.69E-46
MS.gene059317	MS.gene064070	0.820868	5.46E-53	-1.69E-46
MS.gene059713	MS.gene064070	0.8145	1.49E-51	-1.69E-46
MS.gene059725	MS.gene064070	0.814459	1.52E-51	-1.69E-46
MS.gene05978	MS.gene064070	0.81724	3.65E-52	-1.69E-46
MS.gene05979	MS.gene064070	0.828295	9.73E-55	-1.69E-46
MS.gene059842	MS.gene064070	0.868288	7.30E-66	-1.69E-46
MS.gene059937	MS.gene064070	0.851276	9.86E-61	-1.69E-46
MS.gene060011	MS.gene064070	0.808183	3.51E-50	-1.69E-46
MS.gene060167	MS.gene064070	0.827482	1.53E-54	-1.69E-46
MS.gene060310	MS.gene064070	0.843589	1.28E-58	-1.69E-46
MS.gene060312	MS.gene064070	0.817265	3.61E-52	-1.69E-46
MS.gene060316	MS.gene064070	0.806049	9.93E-50	-1.69E-46
MS.gene060322	MS.gene064070	0.863178	3.00E-64	-1.69E-46
MS.gene060429	MS.gene064070	0.853758	1.93E-61	-1.69E-46
MS.gene06052	MS.gene064070	0.806028	1.00E-49	-1.69E-46
MS.gene060586	MS.gene064070	0.802466	5.53E-49	-1.69E-46
MS.gene060587	MS.gene064070	0.806735	7.12E-50	-1.69E-46
MS.gene060637	MS.gene064070	0.817216	3.70E-52	-1.69E-46
MS.gene060683	MS.gene064070	0.82428	8.79E-54	-1.69E-46
MS.gene060685	MS.gene064070	0.823563	1.30E-53	-1.69E-46
MS.gene060802	MS.gene064070	0.839644	1.40E-57	-1.69E-46
MS.gene060803	MS.gene064070	0.87989	8.61E-70	-1.69E-46
MS.gene060907	MS.gene064070	0.800373	1.49E-48	-1.69E-46
MS.gene060998	MS.gene064070	0.852486	4.47E-61	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064070.t1	MTR_8g005360	100.000	64	0	0	1	64	1	64	1.79e-43	134

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064070.t1	AT3G08610	75.000	64	16	0	1	64	1	64	2.64e-33	108

Find 0 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAAACTTGAATTGAAT+TGG	+	55975:12349-12368	MS.gene064070:intron	15.0%
!!	ATTGAATTGGATCTATTTTG+TGG	+	55975:12362-12381	MS.gene064070:intron	25.0%
	ATTCCAGCAATTATTCCCAA+AGG	-	55975:12221-12240	MS.gene064070:intergenic	35.0%
	TTGGAAGCTATGTTACCTTT+GGG	+	55975:12203-12222	MS.gene064070:CDS	35.0%
!	TTACCTTTGGGAATAATTGC+TGG	+	55975:12215-12234	MS.gene064070:CDS	35.0%
	AAATCATTGCCGATGTGCTT+AGG	-	55975:12392-12411	MS.gene06407:intergenic	40.0%
	GCTGGAATGCTTTGTGTTAT+GGG	+	55975:12233-12252	MS.gene064070:CDS	40.0%
	GTTGGAAGCTATGTTACCTT+TGG	+	55975:12202-12221	MS.gene064070:CDS	40.0%
	TGCTGGAATGCTTTGTGTTA+TGG	+	55975:12232-12251	MS.gene064070:CDS	40.0%
	AGCACATCGGCAATGATTTG+TGG	+	55975:12393-12412	MS.gene064070:CDS	45.0%
!	GCACATCGGCAATGATTTGT+GGG	+	55975:12394-12413	MS.gene064070:CDS	45.0%
!!	TGTGGTTAGCCTAAGCACAT+CGG	+	55975:12380-12399	MS.gene064070:intron	45.0%
	CTTCTTGTCCCTACGTTCCA+TGG	-	55975:12426-12445	MS.gene064070:intergenic	50.0%
	TACATCCACAGAGCTGCTCA+CGG	+	55975:12269-12288	MS.gene064070:CDS	50.0%
!	CGGCAATGATTTGTGGGACG+TGG	+	55975:12400-12419	MS.gene064070:CDS	55.0%
!	TGATTTGTGGGACGTGGCCA+TGG	+	55975:12406-12425	MS.gene064070:CDS	55.0%
	GGACGTGGCCATGGAACGTA+GGG	+	55975:12415-12434	MS.gene064070:CDS	60.0%
	CTCGTCCGTGAGCAGCTCTG+TGG	-	55975:12277-12296	MS.gene064070:intergenic	65.0%
	GGGACGTGGCCATGGAACGT+AGG	+	55975:12414-12433	MS.gene064070:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
55975	gene	12188	12480	12188	ID=MS.gene064070
55975	mRNA	12188	12480	12188	ID=MS.gene064070.t1;Parent=MS.gene064070
55975	exon	12188	12295	12188	ID=MS.gene064070.t1.exon1;Parent=MS.gene064070.t1
55975	CDS	12188	12295	12188	ID=cds.MS.gene064070.t1;Parent=MS.gene064070.t1
55975	exon	12389	12480	12389	ID=MS.gene064070.t1.exon2;Parent=MS.gene064070.t1
55975	CDS	12389	12480	12389	ID=cds.MS.gene064070.t1;Parent=MS.gene064070.t1

Gene Sequence	>MS.gene064070 ATGGCGTTGCATTGGTTGGAAGCTATGTTACCTTTGGGAATAATTGCTGGAATGCTTTGTGTTATGGGTAACGCTCAGTATTACATCCACAGAGCTGCTCACGGACGAGTATGTATTCTTCTTCATTCAATTCAATTGAAGTTATCTGTTCTGTGTTTTTAAAATTAAACTTGAATTGAATTGGATCTATTTTGTGGTTAGCCTAAGCACATCGGCAATGATTTGTGGGACGTGGCCATGGAACGTAGGGACAAGAAGCTCGTCGATCAAGCTTCTTCTTCCAATTACAACAG
Protein sequence	>MS.gene064070.t1 MALHWLEAMLPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDLWDVAMERRDKKLVDQASSSNYN