Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97022.t1 | XP_013449864.1 | 99.3 | 138 | 1 | 0 | 1 | 138 | 1 | 138 | 3.20E-70 | 274.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97022.t1 | P49964 | 68.9 | 132 | 37 | 2 | 7 | 138 | 9 | 136 | 2.1e-46 | 186.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97022.t1 | A0A072U2F6 | 99.3 | 138 | 1 | 0 | 1 | 138 | 1 | 138 | 2.3e-70 | 274.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene97022 | 0.828189 | 1.03E-54 | -1.69E-46 |
| MS.gene049159 | MS.gene97022 | 0.828973 | 6.67E-55 | -1.69E-46 |
| MS.gene049254 | MS.gene97022 | 0.825682 | 4.10E-54 | -1.69E-46 |
| MS.gene049501 | MS.gene97022 | 0.824833 | 6.52E-54 | -1.69E-46 |
| MS.gene049821 | MS.gene97022 | 0.80633 | 8.67E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene97022 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene97022 | 0.804519 | 2.08E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene97022 | 0.837033 | 6.60E-57 | -1.69E-46 |
| MS.gene05045 | MS.gene97022 | 0.834766 | 2.48E-56 | -1.69E-46 |
| MS.gene050719 | MS.gene97022 | 0.808442 | 3.09E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene97022 | 0.810053 | 1.40E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene97022 | 0.818432 | 1.97E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene97022 | 0.846428 | 2.19E-59 | -1.69E-46 |
| MS.gene051247 | MS.gene97022 | 0.84961 | 2.90E-60 | -1.69E-46 |
| MS.gene051328 | MS.gene97022 | 0.83073 | 2.49E-55 | -1.69E-46 |
| MS.gene05134 | MS.gene97022 | 0.804823 | 1.80E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene97022 | 0.833572 | 4.94E-56 | -1.69E-46 |
| MS.gene051594 | MS.gene97022 | 0.821379 | 4.17E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene97022 | 0.808278 | 3.35E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene97022 | 0.822551 | 2.23E-53 | -1.69E-46 |
| MS.gene051720 | MS.gene97022 | 0.8261 | 3.26E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene97022 | 0.83422 | 3.40E-56 | -1.69E-46 |
| MS.gene051957 | MS.gene97022 | 0.816507 | 5.34E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene97022 | 0.806361 | 8.54E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene97022 | 0.804647 | 1.95E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene97022 | 0.822317 | 2.53E-53 | -1.69E-46 |
| MS.gene052519 | MS.gene97022 | 0.859679 | 3.50E-63 | -1.69E-46 |
| MS.gene052582 | MS.gene97022 | 0.80929 | 2.04E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene97022 | 0.803406 | 3.54E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene97022 | 0.828136 | 1.06E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene97022 | 0.845352 | 4.28E-59 | -1.69E-46 |
| MS.gene052863 | MS.gene97022 | 0.858437 | 8.25E-63 | -1.69E-46 |
| MS.gene052896 | MS.gene97022 | 0.832889 | 7.31E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene97022 | 0.834887 | 2.31E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene97022 | 0.851842 | 6.82E-61 | -1.69E-46 |
| MS.gene053883 | MS.gene97022 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene053900 | MS.gene97022 | 0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene97022 | 0.808142 | 3.58E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene97022 | 0.812367 | 4.39E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene97022 | 0.826999 | 1.99E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene97022 | 0.823442 | 1.38E-53 | -1.69E-46 |
| MS.gene05468 | MS.gene97022 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene97022 | 0.822156 | 2.75E-53 | -1.69E-46 |
| MS.gene054801 | MS.gene97022 | 0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene97022 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene97022 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene97022 | 0.842809 | 2.06E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene97022 | 0.824682 | 7.07E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene97022 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene97022 | 0.807991 | 3.86E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene97022 | 0.832817 | 7.61E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene97022 | 0.867708 | 1.12E-65 | -1.69E-46 |
| MS.gene055926 | MS.gene97022 | 0.824706 | 6.98E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene97022 | 0.846334 | 2.32E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene97022 | 0.817927 | 2.56E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene97022 | 0.836338 | 9.92E-57 | -1.69E-46 |
| MS.gene056373 | MS.gene97022 | 0.806342 | 8.62E-50 | -1.69E-46 |
| MS.gene056498 | MS.gene97022 | 0.802338 | 5.88E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene97022 | 0.868165 | 8.00E-66 | -1.69E-46 |
| MS.gene056784 | MS.gene97022 | 0.806738 | 7.11E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene97022 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene97022 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene97022 | 0.83899 | 2.07E-57 | -1.69E-46 |
| MS.gene057693 | MS.gene97022 | 0.849094 | 4.03E-60 | -1.69E-46 |
| MS.gene057855 | MS.gene97022 | 0.811863 | 5.66E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene97022 | 0.819484 | 1.13E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene97022 | 0.820544 | 6.49E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene97022 | 0.830683 | 2.56E-55 | -1.69E-46 |
| MS.gene058084 | MS.gene97022 | 0.808857 | 2.52E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene97022 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene97022 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene058783 | MS.gene97022 | 0.801364 | 9.32E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene97022 | 0.825201 | 5.33E-54 | -1.69E-46 |
| MS.gene05954 | MS.gene97022 | 0.802106 | 6.57E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene97022 | 0.816678 | 4.89E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene97022 | 0.838484 | 2.80E-57 | -1.69E-46 |
| MS.gene059937 | MS.gene97022 | 0.808462 | 3.06E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene97022 | 0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene060312 | MS.gene97022 | 0.828397 | 9.20E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene97022 | 0.845441 | 4.05E-59 | -1.69E-46 |
| MS.gene060429 | MS.gene97022 | 0.839327 | 1.69E-57 | -1.69E-46 |
| MS.gene060521 | MS.gene97022 | 0.805135 | 1.55E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene97022 | 0.820311 | 7.34E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75343 | MS.gene97022 | PPI |
| MS.gene61154 | MS.gene97022 | PPI |
| MS.gene026743 | MS.gene97022 | PPI |
| MS.gene034094 | MS.gene97022 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97022.t1 | MTR_7g096570 | 99.275 | 138 | 1 | 0 | 1 | 138 | 1 | 138 | 1.70e-100 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97022.t1 | AT1G48160 | 70.270 | 111 | 33 | 0 | 1 | 111 | 1 | 111 | 5.30e-57 | 174 |
| MS.gene97022.t1 | AT1G48160 | 70.270 | 111 | 33 | 0 | 1 | 111 | 1 | 111 | 5.30e-57 | 174 |
Find 34 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTCCTTCCATGGTGTTTA+GGG | 0.204157 | 7.4:+12915371 | None:intergenic |
| AACCCTACTTGTGTGGAAAT+TGG | 0.210058 | 7.4:-12917519 | MS.gene97022:CDS |
| TGATGCAGTCTCCTGCTTCT+TGG | 0.227052 | 7.4:+12915351 | None:intergenic |
| TTGGTCCTTCCATGGTGTTT+AGG | 0.258012 | 7.4:+12915370 | None:intergenic |
| ACCCTACTTGTGTGGAAATT+GGG | 0.303637 | 7.4:-12917518 | MS.gene97022:CDS |
| TCATGCAAAGAGGACGAGTT+AGG | 0.334941 | 7.4:-12917357 | MS.gene97022:CDS |
| GCTGGACCTTCCAACAAATC+TGG | 0.347799 | 7.4:-12915313 | MS.gene97022:CDS |
| TCCACCTTTCCCAGATTTGT+TGG | 0.371350 | 7.4:+12915303 | None:intergenic |
| CCTGCTTCTTGGTCCTTCCA+TGG | 0.417818 | 7.4:+12915362 | None:intergenic |
| GTTGCTGAAGGAAGACGAAT+TGG | 0.430316 | 7.4:-12917561 | MS.gene97022:CDS |
| ACGATCCACTTCTTTATGCT+TGG | 0.443869 | 7.4:+12917618 | None:intergenic |
| CCTTTCCCAGATTTGTTGGA+AGG | 0.448852 | 7.4:+12915307 | None:intergenic |
| TCAACAACAACTGCAACTGC+TGG | 0.454659 | 7.4:-12915331 | MS.gene97022:CDS |
| ATTAAACTTACTGGAAGCTA+TGG | 0.462420 | 7.4:+12917294 | None:intergenic |
| CATGCAAAGAGGACGAGTTA+GGG | 0.478286 | 7.4:-12917356 | MS.gene97022:CDS |
| CCCTACTTGTGTGGAAATTG+GGG | 0.486455 | 7.4:-12917517 | MS.gene97022:CDS |
| TAATTAACCTCGATTGCAAA+AGG | 0.489985 | 7.4:+12917471 | None:intergenic |
| CTGGACCTTCCAACAAATCT+GGG | 0.500340 | 7.4:-12915312 | MS.gene97022:CDS |
| CCCCAATTTCCACACAAGTA+GGG | 0.510757 | 7.4:+12917517 | None:intergenic |
| CCATGGAAGGACCAAGAAGC+AGG | 0.522661 | 7.4:-12915362 | MS.gene97022:CDS |
| AATGTTACGCGTTGCAGAGA+TGG | 0.526719 | 7.4:-12915395 | MS.gene97022:CDS |
| AACTTACTGGAAGCTATGGA+TGG | 0.533770 | 7.4:+12917298 | None:intergenic |
| TCCCCAATTTCCACACAAGT+AGG | 0.535068 | 7.4:+12917516 | None:intergenic |
| CCTCGTGATTTCATGCAAAG+AGG | 0.566493 | 7.4:-12917367 | MS.gene97022:CDS |
| TCCAACAAATCTGGGAAAGG+TGG | 0.573312 | 7.4:-12915304 | MS.gene97022:CDS |
| CCTTCCAACAAATCTGGGAA+AGG | 0.605602 | 7.4:-12915307 | MS.gene97022:CDS |
| AATTACCAAGCATAAAGAAG+TGG | 0.608084 | 7.4:-12917623 | MS.gene97022:CDS |
| ATGCGAAAACCCTACTTGTG+TGG | 0.613529 | 7.4:-12917526 | MS.gene97022:CDS |
| TTGTTGATCACAGCTTGACA+AGG | 0.619387 | 7.4:-12917395 | MS.gene97022:intron |
| TGGTCCCTAAACACCATGGA+AGG | 0.619588 | 7.4:-12915375 | MS.gene97022:CDS |
| CCTCTTTGCATGAAATCACG+AGG | 0.620436 | 7.4:+12917367 | None:intergenic |
| CAAAGTGTAAGTAAGATGGA+AGG | 0.620681 | 7.4:-12917648 | None:intergenic |
| GAGATGGTCCCTAAACACCA+TGG | 0.690946 | 7.4:-12915379 | MS.gene97022:CDS |
| CTCTTTGCATGAAATCACGA+GGG | 0.694337 | 7.4:+12917368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTATTAGAGAAAAA+GGG | + | chr7.4:12916953-12916972 | None:intergenic | 10.0% |
| !! | CAATTAATTATTAGAGAAAA+AGG | + | chr7.4:12916954-12916973 | None:intergenic | 15.0% |
| !! | GTTATAATTATTAAACTTAC+TGG | + | chr7.4:12915639-12915658 | None:intergenic | 15.0% |
| !! | TACTTTCATGTTAAATAAAA+TGG | + | chr7.4:12916223-12916242 | None:intergenic | 15.0% |
| !! | AATAAAAAATGCCAAAAACA+TGG | + | chr7.4:12916447-12916466 | None:intergenic | 20.0% |
| !! | AATGGTAAAGGTTAAAAAAT+GGG | - | chr7.4:12916799-12916818 | MS.gene97022:intron | 20.0% |
| !! | AGACCATTATAATATAACAT+TGG | - | chr7.4:12917077-12917096 | MS.gene97022:intron | 20.0% |
| !! | ATTAATTGTAAGATCTGAAA+TGG | - | chr7.4:12916966-12916985 | MS.gene97022:intron | 20.0% |
| !! | TATATTGTTATGATTTCCAA+CGG | + | chr7.4:12917267-12917286 | None:intergenic | 20.0% |
| !! | TTCGAATATAGAGTTAAAAA+GGG | + | chr7.4:12916492-12916511 | None:intergenic | 20.0% |
| !! | TTTCGAATATAGAGTTAAAA+AGG | + | chr7.4:12916493-12916512 | None:intergenic | 20.0% |
| !!! | AACACATATTTTATGGAAAT+GGG | + | chr7.4:12915860-12915879 | None:intergenic | 20.0% |
| !!! | CTTATAATATTCCACTTTTA+TGG | - | chr7.4:12916092-12916111 | MS.gene97022:intron | 20.0% |
| !!! | CTTTTTATATTTTCTAGACA+CGG | - | chr7.4:12917118-12917137 | MS.gene97022:intron | 20.0% |
| !!! | TTACAAATTCAAGTTGATTA+AGG | - | chr7.4:12916553-12916572 | MS.gene97022:intron | 20.0% |
| !!! | TTATAAGTTCTAATTGTAGA+TGG | - | chr7.4:12916148-12916167 | MS.gene97022:intron | 20.0% |
| !!! | TTATGATAGCTTATTTCTTA+TGG | - | chr7.4:12917328-12917347 | MS.gene97022:CDS | 20.0% |
| ! | AAAAGAATAGCATAATCTTG+TGG | + | chr7.4:12917054-12917073 | None:intergenic | 25.0% |
| ! | AAGATATCAAAGTAATGTTG+TGG | + | chr7.4:12915887-12915906 | None:intergenic | 25.0% |
| ! | AATATAGTTCTTAGCTATCT+GGG | - | chr7.4:12915704-12915723 | MS.gene97022:intron | 25.0% |
| ! | AGACCATGATAATATAACAT+TGG | - | chr7.4:12917028-12917047 | MS.gene97022:intron | 25.0% |
| ! | AGTTACAAAATTGACATACA+TGG | + | chr7.4:12916852-12916871 | None:intergenic | 25.0% |
| ! | ATATTGTTATGATTTCCAAC+GGG | + | chr7.4:12917266-12917285 | None:intergenic | 25.0% |
| ! | GAATGGTAAAGGTTAAAAAA+TGG | - | chr7.4:12916798-12916817 | MS.gene97022:intron | 25.0% |
| ! | TAATATAGTTCTTAGCTATC+TGG | - | chr7.4:12915703-12915722 | MS.gene97022:intron | 25.0% |
| ! | TGGCCAATGTTATATTATAA+TGG | + | chr7.4:12917083-12917102 | None:intergenic | 25.0% |
| ! | TTCATAATGTTACATGCATA+AGG | + | chr7.4:12916393-12916412 | None:intergenic | 25.0% |
| !! | ACACATATTTTATGGAAATG+GGG | + | chr7.4:12915859-12915878 | None:intergenic | 25.0% |
| !! | GAACACATATTTTATGGAAA+TGG | + | chr7.4:12915861-12915880 | None:intergenic | 25.0% |
| !! | TGGTTAGAACACATATTTTA+TGG | + | chr7.4:12915867-12915886 | None:intergenic | 25.0% |
| !!! | AACTACTTTAGAGTTTGATA+AGG | + | chr7.4:12916992-12917011 | None:intergenic | 25.0% |
| !!! | TTTTGGAATTGATGTAAACA+GGG | + | chr7.4:12915335-12915354 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTATGTCTTTGC+AGG | - | chr7.4:12917494-12917513 | MS.gene97022:CDS | 25.0% |
| !!! | TTTTTGGAATTGATGTAAAC+AGG | + | chr7.4:12915336-12915355 | None:intergenic | 25.0% |
| AAAGCACAAATTGAAGAAGT+AGG | - | chr7.4:12916613-12916632 | MS.gene97022:intron | 30.0% | |
| AATATCATAGATGATCTCTC+TGG | + | chr7.4:12917303-12917322 | None:intergenic | 30.0% | |
| AATGTTACATGCATAAGGTA+TGG | + | chr7.4:12916388-12916407 | None:intergenic | 30.0% | |
| AATTACCAAGCATAAAGAAG+TGG | - | chr7.4:12915298-12915317 | MS.gene97022:CDS | 30.0% | |
| ATGTTAATAACTCACAACAG+AGG | - | chr7.4:12916656-12916675 | MS.gene97022:intron | 30.0% | |
| ATTAAACTTACTGGAAGCTA+TGG | + | chr7.4:12915630-12915649 | None:intergenic | 30.0% | |
| CCAACTATCTAAATACCATA+AGG | + | chr7.4:12915758-12915777 | None:intergenic | 30.0% | |
| CCTTATGGTATTTAGATAGT+TGG | - | chr7.4:12915755-12915774 | MS.gene97022:intron | 30.0% | |
| CTAAATCCTATAATTTCTGC+AGG | + | chr7.4:12917153-12917172 | None:intergenic | 30.0% | |
| CTGCAGAAATTATAGGATTT+AGG | - | chr7.4:12917151-12917170 | MS.gene97022:intron | 30.0% | |
| TAATTAACCTCGATTGCAAA+AGG | + | chr7.4:12915453-12915472 | None:intergenic | 30.0% | |
| TGAGTTACTGACAACTTAAT+TGG | - | chr7.4:12915951-12915970 | MS.gene97022:intron | 30.0% | |
| TGCAAGCATCACATATTAAA+AGG | - | chr7.4:12917387-12917406 | MS.gene97022:intron | 30.0% | |
| TGGAATATTATAAGTAGTGC+TGG | + | chr7.4:12916086-12916105 | None:intergenic | 30.0% | |
| TGGCCAATGTTATATTATCA+TGG | + | chr7.4:12917034-12917053 | None:intergenic | 30.0% | |
| TGTTAATAACTCACAACAGA+GGG | - | chr7.4:12916657-12916676 | MS.gene97022:intron | 30.0% | |
| TTCTTCTTAGAGAATGGTAA+AGG | - | chr7.4:12916787-12916806 | MS.gene97022:intron | 30.0% | |
| TTGATATGACAAAGTGATAC+TGG | - | chr7.4:12915992-12916011 | MS.gene97022:intron | 30.0% | |
| TTTAAGCCTGCAGAAATTAT+AGG | - | chr7.4:12917144-12917163 | MS.gene97022:intron | 30.0% | |
| ! | AGATGGACTTAAAGTAGAAT+TGG | - | chr7.4:12916165-12916184 | MS.gene97022:intron | 30.0% |
| ! | GTGTTTTTCTTCTTAGAGAA+TGG | - | chr7.4:12916781-12916800 | MS.gene97022:intron | 30.0% |
| !! | AGTTAATGATTTGCTCACAT+AGG | - | chr7.4:12916259-12916278 | MS.gene97022:intron | 30.0% |
| !! | ATGCCACTTTAGTTAAAACA+AGG | + | chr7.4:12916587-12916606 | None:intergenic | 30.0% |
| !!! | CTCCAATATTTTGACTGTTT+AGG | - | chr7.4:12916518-12916537 | MS.gene97022:intron | 30.0% |
| !!! | GTACCTTGTTTTAACTAAAG+TGG | - | chr7.4:12916581-12916600 | MS.gene97022:intron | 30.0% |
| !!! | GTTAGACTTTTGTTTCTGTT+CGG | - | chr7.4:12916197-12916216 | MS.gene97022:intron | 30.0% |
| ATTATAGGATTTAGGCAGAG+AGG | - | chr7.4:12917159-12917178 | MS.gene97022:intron | 35.0% | |
| GATCAACATAGAAGATACGT+AGG | - | chr7.4:12916417-12916436 | MS.gene97022:intron | 35.0% | |
| GGCCTAAACAGTCAAAATAT+TGG | + | chr7.4:12916523-12916542 | None:intergenic | 35.0% | |
| TGGGATGCAATTTCATTTCT+AGG | + | chr7.4:12916342-12916361 | None:intergenic | 35.0% | |
| TTATAGGATTTAGGCAGAGA+GGG | - | chr7.4:12917160-12917179 | MS.gene97022:intron | 35.0% | |
| TTGTATCATCTGATTAGCAC+TGG | - | chr7.4:12915731-12915750 | MS.gene97022:intron | 35.0% | |
| ! | AGTTAGGGTTTTGCTCAAAA+AGG | - | chr7.4:12915580-12915599 | MS.gene97022:intron | 35.0% |
| ! | CATATTTTATGGAAATGGGG+TGG | + | chr7.4:12915856-12915875 | None:intergenic | 35.0% |
| ! | GTAAAACTAGTTTGCACTGA+CGG | - | chr7.4:12916920-12916939 | MS.gene97022:intron | 35.0% |
| ! | TAAACTTCCTTTTGCAATCG+AGG | - | chr7.4:12915443-12915462 | MS.gene97022:intron | 35.0% |
| ! | TTTTGCTCAAAAAGGAGGAT+GGG | - | chr7.4:12915588-12915607 | MS.gene97022:intron | 35.0% |
| !! | AAGTGATACTGGCTTTAAGT+TGG | - | chr7.4:12916003-12916022 | MS.gene97022:intron | 35.0% |
| !! | AGTGATACTGGCTTTAAGTT+GGG | - | chr7.4:12916004-12916023 | MS.gene97022:intron | 35.0% |
| !! | ATATTCCACTTTTATGGCTC+TGG | - | chr7.4:12916098-12916117 | MS.gene97022:intron | 35.0% |
| !! | TGAATTTGTAAAAGTGCCAC+TGG | + | chr7.4:12916544-12916563 | None:intergenic | 35.0% |
| AACCCTACTTGTGTGGAAAT+TGG | - | chr7.4:12915402-12915421 | MS.gene97022:CDS | 40.0% | |
| AACTTACTGGAAGCTATGGA+TGG | + | chr7.4:12915626-12915645 | None:intergenic | 40.0% | |
| ACCCTACTTGTGTGGAAATT+GGG | - | chr7.4:12915403-12915422 | MS.gene97022:CDS | 40.0% | |
| ACGATCCACTTCTTTATGCT+TGG | + | chr7.4:12915306-12915325 | None:intergenic | 40.0% | |
| ATAGATGATCTCTCTGGTGT+GGG | + | chr7.4:12917297-12917316 | None:intergenic | 40.0% | |
| CTATCATTCCTTGTCTAAGC+CGG | - | chr7.4:12915827-12915846 | MS.gene97022:intron | 40.0% | |
| CTCTTTGCATGAAATCACGA+GGG | + | chr7.4:12915556-12915575 | None:intergenic | 40.0% | |
| TCCAAAAAGACTGTTGCTGA+AGG | - | chr7.4:12915348-12915367 | MS.gene97022:CDS | 40.0% | |
| TCTTCTCCATTCCTTGTCTT+GGG | + | chr7.4:12916361-12916380 | None:intergenic | 40.0% | |
| TGAAATTGCATCCCAAGACA+AGG | - | chr7.4:12916347-12916366 | MS.gene97022:intron | 40.0% | |
| TTGTTGATCACAGCTTGACA+AGG | - | chr7.4:12915526-12915545 | MS.gene97022:intron | 40.0% | |
| ! | ACGTAGGAACTCCATGTTTT+TGG | - | chr7.4:12916433-12916452 | MS.gene97022:intron | 40.0% |
| ! | AGTAGGGTTTTCGCATGATT+TGG | + | chr7.4:12915391-12915410 | None:intergenic | 40.0% |
| ! | GTTTTGCTCAAAAAGGAGGA+TGG | - | chr7.4:12915587-12915606 | MS.gene97022:intron | 40.0% |
| ! | TAGGGTTTTGCTCAAAAAGG+AGG | - | chr7.4:12915583-12915602 | MS.gene97022:intron | 40.0% |
| ! | TCCTTCAGCAACAGTCTTTT+TGG | + | chr7.4:12915352-12915371 | None:intergenic | 40.0% |
| !!! | ATTTTGACTGTTTAGGCCAG+TGG | - | chr7.4:12916525-12916544 | MS.gene97022:intron | 40.0% |
| AATGTTACGCGTTGCAGAGA+TGG | - | chr7.4:12917526-12917545 | MS.gene97022:CDS | 45.0% | |
| ATGCGAAAACCCTACTTGTG+TGG | - | chr7.4:12915395-12915414 | MS.gene97022:CDS | 45.0% | |
| CATAGATGATCTCTCTGGTG+TGG | + | chr7.4:12917298-12917317 | None:intergenic | 45.0% | |
| CATGCAAAGAGGACGAGTTA+GGG | - | chr7.4:12915565-12915584 | MS.gene97022:intron | 45.0% | |
| CCCCAATTTCCACACAAGTA+GGG | + | chr7.4:12915407-12915426 | None:intergenic | 45.0% | |
| CCCTACTTGTGTGGAAATTG+GGG | - | chr7.4:12915404-12915423 | MS.gene97022:CDS | 45.0% | |
| CCTCGTGATTTCATGCAAAG+AGG | - | chr7.4:12915554-12915573 | MS.gene97022:intron | 45.0% | |
| CCTCTTTGCATGAAATCACG+AGG | + | chr7.4:12915557-12915576 | None:intergenic | 45.0% | |
| CCTTCCAACAAATCTGGGAA+AGG | - | chr7.4:12917614-12917633 | MS.gene97022:CDS | 45.0% | |
| CTCTTCTCCATTCCTTGTCT+TGG | + | chr7.4:12916362-12916381 | None:intergenic | 45.0% | |
| CTGGACCTTCCAACAAATCT+GGG | - | chr7.4:12917609-12917628 | MS.gene97022:CDS | 45.0% | |
| GACATACATGGCAAGATGAC+AGG | + | chr7.4:12916840-12916859 | None:intergenic | 45.0% | |
| GTTGCTGAAGGAAGACGAAT+TGG | - | chr7.4:12915360-12915379 | MS.gene97022:CDS | 45.0% | |
| TCAACAACAACTGCAACTGC+TGG | - | chr7.4:12917590-12917609 | MS.gene97022:CDS | 45.0% | |
| TCATGCAAAGAGGACGAGTT+AGG | - | chr7.4:12915564-12915583 | MS.gene97022:intron | 45.0% | |
| TCCAACAAATCTGGGAAAGG+TGG | - | chr7.4:12917617-12917636 | MS.gene97022:CDS | 45.0% | |
| TCCACCTTTCCCAGATTTGT+TGG | + | chr7.4:12917621-12917640 | None:intergenic | 45.0% | |
| TCCCCAATTTCCACACAAGT+AGG | + | chr7.4:12915408-12915427 | None:intergenic | 45.0% | |
| TGAGTCCAGAGCCATAAAAG+TGG | + | chr7.4:12916106-12916125 | None:intergenic | 45.0% | |
| TGGTCCTTCCATGGTGTTTA+GGG | + | chr7.4:12917553-12917572 | None:intergenic | 45.0% | |
| TTGCATCCCAAGACAAGGAA+TGG | - | chr7.4:12916352-12916371 | MS.gene97022:intron | 45.0% | |
| TTGGTCCTTCCATGGTGTTT+AGG | + | chr7.4:12917554-12917573 | None:intergenic | 45.0% | |
| ! | ACTCAACACTGGATTGGAAC+TGG | - | chr7.4:12916121-12916140 | MS.gene97022:intron | 45.0% |
| ! | CTGATTAGCACTGGACCTTA+TGG | - | chr7.4:12915740-12915759 | MS.gene97022:intron | 45.0% |
| !! | CCTTTCCCAGATTTGTTGGA+AGG | + | chr7.4:12917617-12917636 | None:intergenic | 45.0% |
| AGGATTTAGGCAGAGAGGGA+GGG | - | chr7.4:12917164-12917183 | MS.gene97022:intron | 50.0% | |
| ATTTCCAACGGGACGTCTTC+CGG | + | chr7.4:12917255-12917274 | None:intergenic | 50.0% | |
| CTCTGGACTCAACACTGGAT+TGG | - | chr7.4:12916115-12916134 | MS.gene97022:intron | 50.0% | |
| GAGATGGTCCCTAAACACCA+TGG | - | chr7.4:12917542-12917561 | MS.gene97022:CDS | 50.0% | |
| GCTGGACCTTCCAACAAATC+TGG | - | chr7.4:12917608-12917627 | MS.gene97022:CDS | 50.0% | |
| TAGGATTTAGGCAGAGAGGG+AGG | - | chr7.4:12917163-12917182 | MS.gene97022:intron | 50.0% | |
| TCATTCCTTGTCTAAGCCGG+AGG | - | chr7.4:12915830-12915849 | MS.gene97022:intron | 50.0% | |
| TGATGCAGTCTCCTGCTTCT+TGG | + | chr7.4:12917573-12917592 | None:intergenic | 50.0% | |
| TGGTCCCTAAACACCATGGA+AGG | - | chr7.4:12917546-12917565 | MS.gene97022:CDS | 50.0% | |
| ! | ACGTTGGTTGGCGTTTCGAT+TGG | - | chr7.4:12915925-12915944 | MS.gene97022:intron | 50.0% |
| !! | TATGGCTCTGGACTCAACAC+TGG | - | chr7.4:12916110-12916129 | MS.gene97022:intron | 50.0% |
| ACCAACGTCAGCATCAGGGT+CGG | + | chr7.4:12915913-12915932 | None:intergenic | 55.0% | |
| ACCCTGATGCTGACGTTGGT+TGG | - | chr7.4:12915913-12915932 | MS.gene97022:intron | 55.0% | |
| ATTTAGGCAGAGAGGGAGGG+AGG | - | chr7.4:12917167-12917186 | MS.gene97022:intron | 55.0% | |
| CCATGGAAGGACCAAGAAGC+AGG | - | chr7.4:12917559-12917578 | MS.gene97022:CDS | 55.0% | |
| CCTGCTTCTTGGTCCTTCCA+TGG | + | chr7.4:12917562-12917581 | None:intergenic | 55.0% | |
| GCCAACCAACGTCAGCATCA+GGG | + | chr7.4:12915917-12915936 | None:intergenic | 55.0% | |
| TATGGAAATGGGGTGGCCTC+CGG | + | chr7.4:12915849-12915868 | None:intergenic | 55.0% | |
| TTTAGGCAGAGAGGGAGGGA+GGG | - | chr7.4:12917168-12917187 | MS.gene97022:intron | 55.0% | |
| CGCCAACCAACGTCAGCATC+AGG | + | chr7.4:12915918-12915937 | None:intergenic | 60.0% | |
| TCCGACCCTGATGCTGACGT+TGG | - | chr7.4:12915909-12915928 | MS.gene97022:intron | 60.0% | |
| TTCACCGGAAGACGTCCCGT+TGG | - | chr7.4:12917248-12917267 | MS.gene97022:intron | 60.0% | |
| GGAGGGAGGGCTTCGTTCAC+CGG | - | chr7.4:12917233-12917252 | MS.gene97022:intron | 65.0% | |
| GGTGGCCTCCGGCTTAGACA+AGG | + | chr7.4:12915838-12915857 | None:intergenic | 65.0% | |
| AGAGAGGGAGGGAGGGAGGG+AGG | - | chr7.4:12917175-12917194 | MS.gene97022:intron | 70.0% | |
| AGGCAGAGAGGGAGGGAGGG+AGG | - | chr7.4:12917171-12917190 | MS.gene97022:intron | 70.0% | |
| GAGAGGGAGGGAGGGAGGGA+GGG | - | chr7.4:12917176-12917195 | MS.gene97022:intron | 70.0% | |
| GGCAGAGAGGGAGGGAGGGA+GGG | - | chr7.4:12917172-12917191 | MS.gene97022:intron | 70.0% | |
| AGGGAGGGAGGGAGGGAGGG+AGG | - | chr7.4:12917179-12917198 | MS.gene97022:intron | 75.0% | |
| AGGGAGGGAGGGAGGGAGGG+GGG | - | chr7.4:12917179-12917198 | MS.gene97022:intron | 75.0% | |
| GAGGGAGGGAGGGAGGGAGG+GGG | - | chr7.4:12917178-12917197 | MS.gene97022:intron | 75.0% | |
| GGAGGGAGGGAGGGAGGGAG+GGG | - | chr7.4:12917181-12917200 | MS.gene97022:intron | 75.0% | |
| GGGAGGGAGGGAGGGAGGGA+GGG | - | chr7.4:12917180-12917199 | MS.gene97022:intron | 75.0% | |
| ! | AGGGAGGGAGGGAGGGGGGG+AGG | - | chr7.4:12917195-12917214 | MS.gene97022:intron | 80.0% |
| ! | AGGGAGGGAGGGGGGGAGGG+AGG | - | chr7.4:12917199-12917218 | MS.gene97022:intron | 80.0% |
| ! | AGGGAGGGGGGGAGGGAGGG+GGG | - | chr7.4:12917203-12917222 | MS.gene97022:intron | 80.0% |
| ! | GAGGGAGGGGGGGAGGGAGG+GGG | - | chr7.4:12917202-12917221 | MS.gene97022:intron | 80.0% |
| ! | GGAGGGAGGGGGGGAGGGAG+GGG | - | chr7.4:12917201-12917220 | MS.gene97022:intron | 80.0% |
| ! | GGGAGGGAGGGAGGGAGGGG+GGG | - | chr7.4:12917192-12917211 | MS.gene97022:intron | 80.0% |
| ! | GGGAGGGAGGGAGGGGGGGA+GGG | - | chr7.4:12917196-12917215 | MS.gene97022:intron | 80.0% |
| ! | GGGAGGGAGGGGGGGAGGGA+GGG | - | chr7.4:12917200-12917219 | MS.gene97022:intron | 80.0% |
| ! | AGGGAGGGGGGGAGGGGGGG+AGG | - | chr7.4:12917215-12917234 | MS.gene97022:intron | 85.0% |
| ! | AGGGGGGGAGGGAGGGGGGG+AGG | - | chr7.4:12917207-12917226 | MS.gene97022:intron | 85.0% |
| ! | AGGGGGGGAGGGGGGGAGGG+AGG | - | chr7.4:12917219-12917238 | MS.gene97022:intron | 85.0% |
| ! | GGGAGGGAGGGGGGGAGGGG+GGG | - | chr7.4:12917212-12917231 | MS.gene97022:intron | 85.0% |
| ! | GGGAGGGGGGGAGGGAGGGG+GGG | - | chr7.4:12917204-12917223 | MS.gene97022:intron | 85.0% |
| ! | GGGAGGGGGGGAGGGGGGGA+GGG | - | chr7.4:12917216-12917235 | MS.gene97022:intron | 85.0% |
| ! | GGGGAGGGAGGGGGGGAGGG+GGG | - | chr7.4:12917211-12917230 | MS.gene97022:intron | 85.0% |
| ! | GGGGGAGGGAGGGGGGGAGG+GGG | - | chr7.4:12917210-12917229 | MS.gene97022:intron | 85.0% |
| ! | GGGGGGAGGGAGGGGGGGAG+GGG | - | chr7.4:12917209-12917228 | MS.gene97022:intron | 85.0% |
| ! | GGGGGGGAGGGAGGGGGGGA+GGG | - | chr7.4:12917208-12917227 | MS.gene97022:intron | 85.0% |
| ! | GGGGGGGAGGGGGGGAGGGA+GGG | - | chr7.4:12917220-12917239 | MS.gene97022:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 12915288 | 12917655 | 12915288 | ID=MS.gene97022 |
| chr7.4 | mRNA | 12915288 | 12917655 | 12915288 | ID=MS.gene97022.t1;Parent=MS.gene97022 |
| chr7.4 | exon | 12917479 | 12917655 | 12917479 | ID=MS.gene97022.t1.exon1;Parent=MS.gene97022.t1 |
| chr7.4 | CDS | 12917479 | 12917655 | 12917479 | ID=cds.MS.gene97022.t1;Parent=MS.gene97022.t1 |
| chr7.4 | exon | 12917305 | 12917404 | 12917305 | ID=MS.gene97022.t1.exon2;Parent=MS.gene97022.t1 |
| chr7.4 | CDS | 12917305 | 12917404 | 12917305 | ID=cds.MS.gene97022.t1;Parent=MS.gene97022.t1 |
| chr7.4 | exon | 12915288 | 12915427 | 12915288 | ID=MS.gene97022.t1.exon3;Parent=MS.gene97022.t1 |
| chr7.4 | CDS | 12915288 | 12915427 | 12915288 | ID=cds.MS.gene97022.t1;Parent=MS.gene97022.t1 |
| Gene Sequence |
| Protein sequence |
