AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056908

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056908.t1 MTR_4g065017 95.821 335 9 3 1 333 1 332 0.0 654
MS.gene056908.t1 MTR_2g097910 58.857 350 90 13 1 328 1 318 1.64e-113 332
MS.gene056908.t1 MTR_3g028740 84.000 125 15 1 1 120 3 127 2.06e-72 228
MS.gene056908.t1 MTR_1g085040 80.374 107 21 0 14 120 11 117 5.00e-59 194
MS.gene056908.t1 MTR_2g099740 55.747 174 57 3 11 171 8 174 7.40e-58 192
MS.gene056908.t1 MTR_7g110830 77.570 107 24 0 14 120 11 117 7.91e-57 188
MS.gene056908.t1 MTR_3g077110 79.245 106 22 0 14 119 11 116 1.12e-56 187
MS.gene056908.t1 MTR_4g105130 78.302 106 23 0 14 119 11 116 1.16e-56 188
MS.gene056908.t1 MTR_1g112760 77.358 106 24 0 14 119 12 117 3.24e-56 182
MS.gene056908.t1 MTR_1g085640 75.701 107 26 0 14 120 11 117 9.91e-56 186
MS.gene056908.t1 MTR_7g111290 82.828 99 17 0 14 112 11 109 4.30e-55 184
MS.gene056908.t1 MTR_8g017440 71.560 109 31 0 11 119 8 116 2.08e-54 181
MS.gene056908.t1 MTR_8g017540 71.560 109 31 0 11 119 54 162 6.09e-54 182
MS.gene056908.t1 MTR_8g098860 68.182 110 35 0 11 120 8 117 3.54e-53 177
MS.gene056908.t1 MTR_8g017500 69.725 109 33 0 11 119 8 116 4.68e-53 178
MS.gene056908.t1 MTR_1g100667 71.818 110 31 0 10 119 8 117 5.55e-52 173
MS.gene056908.t1 MTR_5g010020 56.579 152 58 3 11 162 8 151 1.09e-51 174
MS.gene056908.t1 MTR_2g064160 50.000 182 80 5 14 188 10 187 1.56e-50 171
MS.gene056908.t1 MTR_8g017390 69.027 113 34 1 8 119 5 117 2.87e-50 174
MS.gene056908.t1 MTR_8g017340 72.897 107 28 1 14 119 11 117 5.03e-50 174
MS.gene056908.t1 MTR_4g082230 53.793 145 60 1 14 158 11 148 1.05e-49 171
MS.gene056908.t1 MTR_6g055910 58.955 134 52 1 5 135 4 137 1.26e-49 167
MS.gene056908.t1 MTR_4g082290 54.861 144 58 1 15 158 12 148 1.56e-49 170
MS.gene056908.t1 MTR_2g011660 66.667 111 37 0 12 122 10 120 3.58e-49 168
MS.gene056908.t1 MTR_8g017350 71.963 107 29 1 14 119 11 117 7.64e-49 173
MS.gene056908.t1 MTR_3g097450 69.903 103 31 0 17 119 14 116 1.30e-48 165
MS.gene056908.t1 MTR_4g091490 64.602 113 40 0 10 122 8 120 2.09e-48 166
MS.gene056908.t1 MTR_5g079670 52.632 152 56 3 1 152 1 136 2.70e-48 161
MS.gene056908.t1 MTR_4g073420 48.824 170 73 3 17 184 14 171 2.98e-48 164
MS.gene056908.t1 MTR_2g089620 60.000 130 45 1 13 142 10 132 7.12e-48 164
MS.gene056908.t1 MTR_8g095390 66.990 103 34 0 17 119 14 116 1.06e-47 163
MS.gene056908.t1 MTR_3g074520 62.500 112 42 0 11 122 8 119 1.65e-47 164
MS.gene056908.t1 MTR_5g078140 57.895 133 49 1 15 140 12 144 3.21e-47 162
MS.gene056908.t1 MTR_7g011170 64.815 108 38 0 15 122 12 119 7.82e-47 160
MS.gene056908.t1 MTR_2g089450 64.286 112 40 0 15 126 12 123 7.90e-47 159
MS.gene056908.t1 MTR_6g012690 65.741 108 37 0 15 122 12 119 8.39e-47 162
MS.gene056908.t1 MTR_3g065440 66.667 108 36 0 15 122 12 119 9.25e-47 160
MS.gene056908.t1 MTR_7g076740 56.489 131 54 2 15 142 12 142 1.27e-46 160
MS.gene056908.t1 MTR_1g100653 57.895 114 48 0 15 128 12 125 3.12e-46 159
MS.gene056908.t1 MTR_7g115650 42.857 203 95 5 15 217 12 193 3.44e-46 156
MS.gene056908.t1 MTR_5g029840 55.814 129 50 1 15 143 12 133 5.42e-46 159
MS.gene056908.t1 MTR_4g102380 63.889 108 39 0 15 122 12 119 1.14e-45 157
MS.gene056908.t1 MTR_4g485530 48.538 171 73 4 1 161 1 166 1.94e-45 153
MS.gene056908.t1 MTR_4g125520 45.732 164 89 0 15 178 12 175 2.06e-45 157
MS.gene056908.t1 MTR_4g478180 55.385 130 51 1 13 142 11 133 3.69e-45 157
MS.gene056908.t1 MTR_5g007370 52.817 142 56 2 1 142 2 132 6.42e-45 155
MS.gene056908.t1 MTR_7g035075 44.776 201 95 5 1 193 1 193 9.27e-45 152
MS.gene056908.t1 MTR_8g031360 61.062 113 43 1 11 122 9 121 9.63e-45 155
MS.gene056908.t1 MTR_1g076150 60.345 116 46 0 15 130 12 127 1.11e-44 154
MS.gene056908.t1 MTR_6g009430 57.143 112 48 0 11 122 8 119 4.16e-44 154
MS.gene056908.t1 MTR_4g121460 57.627 118 46 1 15 128 12 129 2.74e-43 152
MS.gene056908.t1 MTR_1g043050 62.162 111 42 0 15 125 12 122 3.56e-43 149
MS.gene056908.t1 MTR_3g461490 61.111 108 42 0 15 122 12 119 4.08e-43 151
MS.gene056908.t1 MTR_2g089420 42.647 204 110 3 11 207 7 210 5.92e-43 154
MS.gene056908.t1 MTR_7g117730 59.813 107 43 0 15 121 12 118 8.81e-43 149
MS.gene056908.t1 MTR_2g034790 49.068 161 74 3 15 173 12 166 1.23e-42 150
MS.gene056908.t1 MTR_0251s0050 57.018 114 49 0 8 121 6 119 1.32e-42 149
MS.gene056908.t1 MTR_8g020490 61.111 108 42 0 17 124 10 117 2.13e-42 147
MS.gene056908.t1 MTR_1g043080 62.857 105 39 0 15 119 12 116 2.48e-42 147
MS.gene056908.t1 MTR_3g083540 59.813 107 43 0 15 121 41 147 2.97e-42 149
MS.gene056908.t1 MTR_1g110460 52.500 120 57 0 3 122 14 133 3.76e-42 149
MS.gene056908.t1 MTR_6g006030 56.757 111 48 0 12 122 11 121 4.38e-42 145
MS.gene056908.t1 MTR_7g096930 61.905 105 40 0 15 119 12 116 8.20e-42 147
MS.gene056908.t1 MTR_0008s0390 60.377 106 42 0 13 118 11 116 1.38e-41 146
MS.gene056908.t1 MTR_1g045610 62.264 106 40 0 16 121 22 127 3.58e-41 144
MS.gene056908.t1 MTR_8g027345 59.434 106 43 0 15 120 12 117 7.07e-41 145
MS.gene056908.t1 MTR_5g042030 61.111 108 42 0 15 122 7 114 7.33e-41 144
MS.gene056908.t1 MTR_4g100720 59.091 110 45 0 9 118 7 116 1.73e-40 140
MS.gene056908.t1 MTR_0008s0470 56.140 114 49 1 13 125 11 124 2.12e-40 143
MS.gene056908.t1 MTR_2g067420 61.165 103 40 0 11 113 10 112 3.20e-40 144
MS.gene056908.t1 MTR_7g087130 54.701 117 53 0 15 131 12 128 4.62e-40 144
MS.gene056908.t1 MTR_0140s0030 52.756 127 59 1 15 140 13 139 5.22e-40 144
MS.gene056908.t1 MTR_0489s0020 52.756 127 59 1 15 140 13 139 5.22e-40 144
MS.gene056908.t1 MTR_7g010210 59.434 106 43 0 15 120 12 117 6.99e-40 143
MS.gene056908.t1 MTR_3g039990 52.893 121 57 0 15 135 13 133 8.13e-40 142
MS.gene056908.t1 MTR_7g010210 59.434 106 43 0 15 120 12 117 1.00e-39 141
MS.gene056908.t1 MTR_3g052430 57.547 106 45 0 15 120 41 146 4.17e-39 145
MS.gene056908.t1 MTR_1g017000 51.818 110 52 1 11 119 8 117 4.65e-39 139
MS.gene056908.t1 MTR_3g052450 57.547 106 45 0 15 120 40 145 4.88e-39 145
MS.gene056908.t1 MTR_1g073170 59.259 108 44 0 14 121 19 126 5.23e-39 139
MS.gene056908.t1 MTR_1g017140 40.556 180 82 4 15 176 12 184 5.91e-39 141
MS.gene056908.t1 MTR_8g042410 57.692 104 44 0 15 118 37 140 1.63e-38 144
MS.gene056908.t1 MTR_6g012180 61.616 99 38 0 15 113 12 110 2.03e-38 139
MS.gene056908.t1 MTR_1g086530 50.833 120 59 0 7 126 25 144 2.08e-38 138
MS.gene056908.t1 MTR_1g086510 51.667 120 58 0 7 126 13 132 2.28e-38 137
MS.gene056908.t1 MTR_5g014990 40.000 185 101 3 11 185 8 192 2.77e-38 138
MS.gene056908.t1 MTR_1g021230 58.654 104 43 0 15 118 57 160 3.06e-38 141
MS.gene056908.t1 MTR_1g062940 55.660 106 47 0 15 120 6 111 5.57e-38 135
MS.gene056908.t1 MTR_3g011610 55.660 106 47 0 15 120 37 142 7.28e-38 141
MS.gene056908.t1 MTR_4g057635 52.991 117 54 1 11 126 8 124 1.77e-37 137
MS.gene056908.t1 MTR_4g063100 52.212 113 54 0 16 128 8 120 3.40e-37 134
MS.gene056908.t1 MTR_0008s0280 56.863 102 44 0 16 117 13 114 1.22e-36 132
MS.gene056908.t1 MTR_0063s0090 55.882 102 45 0 15 116 12 113 1.44e-36 131
MS.gene056908.t1 MTR_2g096380 45.985 137 61 1 14 137 5 141 2.89e-36 131
MS.gene056908.t1 MTR_3g103570 52.727 110 51 1 11 119 8 117 3.46e-36 134
MS.gene056908.t1 MTR_2g033170 56.481 108 47 0 15 122 24 131 4.51e-36 133
MS.gene056908.t1 MTR_5g078910 55.238 105 47 0 15 119 7 111 6.40e-36 132
MS.gene056908.t1 MTR_7g111290 87.879 66 8 0 47 112 2 67 8.15e-36 132
MS.gene056908.t1 MTR_7g109320 56.522 115 50 0 15 129 12 126 1.09e-35 132
MS.gene056908.t1 MTR_7g102110 52.294 109 51 1 15 122 12 120 1.20e-35 130
MS.gene056908.t1 MTR_2g088170 57.547 106 45 0 15 120 29 134 2.02e-35 134
MS.gene056908.t1 MTR_6g090405 51.695 118 56 1 11 127 8 125 3.46e-35 129
MS.gene056908.t1 MTR_2g095520 58.000 100 41 1 15 113 12 111 3.69e-35 130
MS.gene056908.t1 MTR_0197s0010 49.219 128 62 2 20 145 6 132 3.90e-35 128
MS.gene056908.t1 MTR_1g083630 51.754 114 55 0 7 120 4 117 1.30e-34 134
MS.gene056908.t1 MTR_5g079220 54.286 105 48 0 15 119 21 125 1.87e-34 127
MS.gene056908.t1 MTR_5g079290 52.381 105 50 0 15 119 17 121 2.53e-34 127
MS.gene056908.t1 MTR_5g079120 38.462 182 107 3 10 191 56 232 3.07e-34 127
MS.gene056908.t1 MTR_5g078800 54.286 105 48 0 15 119 7 111 3.07e-34 126
MS.gene056908.t1 MTR_0247s0040 53.774 106 49 0 11 116 3 108 3.35e-34 124
MS.gene056908.t1 MTR_4g097570 55.340 103 45 1 11 112 8 110 8.77e-34 126
MS.gene056908.t1 MTR_4g123040 50.427 117 58 0 6 122 15 131 9.66e-34 126
MS.gene056908.t1 MTR_5g062790 36.842 190 109 4 16 200 10 193 1.32e-33 126
MS.gene056908.t1 MTR_0193s0090 52.336 107 51 0 11 117 3 109 4.39e-33 122
MS.gene056908.t1 MTR_8g060940 52.830 106 50 0 10 115 2 107 6.25e-33 122
MS.gene056908.t1 MTR_4g128670 53.922 102 46 1 13 113 10 111 1.30e-32 124
MS.gene056908.t1 MTR_7g017260 51.351 111 52 1 11 119 21 131 2.21e-32 122
MS.gene056908.t1 MTR_5g078860 51.429 105 51 0 15 119 7 111 2.65e-32 122
MS.gene056908.t1 MTR_4g097570 54.808 104 45 2 11 112 8 111 3.15e-32 122
MS.gene056908.t1 MTR_5g088080 47.826 115 58 2 16 129 13 126 3.51e-32 121
MS.gene056908.t1 MTR_5g088150 47.826 115 58 2 16 129 13 126 3.51e-32 121
MS.gene056908.t1 MTR_5g488210 47.826 115 58 2 16 129 13 126 3.51e-32 121
MS.gene056908.t1 MTR_5g088640 47.826 115 58 2 16 129 13 126 3.80e-32 121
MS.gene056908.t1 MTR_5g078950 50.000 106 53 0 11 116 3 108 4.99e-32 120
MS.gene056908.t1 MTR_6g055910 61.538 91 32 1 48 135 18 108 6.93e-32 120
MS.gene056908.t1 MTR_5g078930 52.830 106 49 1 12 116 5 110 7.54e-32 119
MS.gene056908.t1 MTR_0001s0360 51.429 105 51 0 15 119 7 111 8.17e-32 120
MS.gene056908.t1 MTR_5g488170 47.826 115 58 2 16 129 13 126 9.50e-32 119
MS.gene056908.t1 MTR_8g006470 49.123 114 56 2 10 122 5 117 1.23e-30 117
MS.gene056908.t1 MTR_4g063100 58.537 82 34 0 47 128 10 91 3.40e-30 114
MS.gene056908.t1 MTR_4g128190 49.153 118 46 2 7 123 3 107 5.37e-30 114
MS.gene056908.t1 MTR_5g007300 62.500 80 30 0 12 91 61 140 2.84e-29 109
MS.gene056908.t1 MTR_4g029540 45.833 120 64 1 15 133 10 129 3.60e-29 114
MS.gene056908.t1 MTR_5g088610 50.000 106 52 1 16 120 10 115 5.35e-29 114
MS.gene056908.t1 MTR_4g094982 39.205 176 88 5 17 180 5 173 7.36e-29 112
MS.gene056908.t1 MTR_2g096380 50.000 104 39 1 47 137 19 122 7.65e-29 111
MS.gene056908.t1 MTR_3g463400 43.511 131 69 3 2 132 121 246 4.06e-28 114
MS.gene056908.t1 MTR_5g016510 48.113 106 54 1 17 122 5 109 1.38e-27 110
MS.gene056908.t1 MTR_5g070020 40.288 139 79 2 15 150 120 257 1.57e-27 110
MS.gene056908.t1 MTR_1g085880 52.212 113 52 2 7 117 3 115 2.64e-27 106
MS.gene056908.t1 MTR_4g019370 50.980 102 49 1 17 118 38 138 6.48e-27 108
MS.gene056908.t1 MTR_5g049190 46.729 107 56 1 11 117 13 118 1.09e-26 105
MS.gene056908.t1 MTR_3g045430 42.241 116 67 0 7 122 5 120 1.29e-26 107
MS.gene056908.t1 MTR_1g085770 52.212 113 52 2 7 117 3 115 1.37e-26 107
MS.gene056908.t1 MTR_3g101290 47.863 117 60 1 17 133 37 152 6.37e-26 103
MS.gene056908.t1 MTR_6g015455 50.000 102 50 1 17 118 5 105 6.72e-26 108
MS.gene056908.t1 MTR_7g061330 46.296 108 57 1 12 119 108 214 1.58e-25 107
MS.gene056908.t1 MTR_7g461410 46.296 108 57 1 12 119 108 214 1.58e-25 107
MS.gene056908.t1 MTR_3g110028 46.296 108 57 1 12 119 80 186 2.00e-25 107
MS.gene056908.t1 MTR_7g061330 46.296 108 57 1 12 119 72 178 2.24e-25 106
MS.gene056908.t1 MTR_3g077650 44.444 117 62 2 2 118 168 281 4.84e-25 105
MS.gene056908.t1 MTR_6g027360 41.880 117 65 2 12 127 73 187 8.42e-25 102
MS.gene056908.t1 MTR_6g027340 40.171 117 67 2 12 127 11 125 3.93e-24 98.2
MS.gene056908.t1 MTR_1g057980 47.000 100 52 1 15 114 78 176 4.82e-24 100
MS.gene056908.t1 MTR_5g082910 47.664 107 55 1 9 115 11 116 1.49e-23 98.6
MS.gene056908.t1 MTR_4g105660 41.818 110 63 1 9 118 172 280 1.52e-23 100
MS.gene056908.t1 MTR_6g074860 45.545 101 54 1 17 117 4 103 1.67e-23 97.4
MS.gene056908.t1 MTR_6g027370 42.735 117 65 2 12 127 93 208 2.43e-23 99.4
MS.gene056908.t1 MTR_7g035350 44.444 108 57 2 17 124 225 329 3.77e-23 99.8
MS.gene056908.t1 MTR_1g026870 43.519 108 60 1 12 119 80 186 4.96e-23 100
MS.gene056908.t1 MTR_5g041570 41.441 111 64 1 13 123 130 239 5.00e-23 99.4
MS.gene056908.t1 MTR_4g082040 39.850 133 76 3 5 136 94 223 6.77e-23 99.0
MS.gene056908.t1 MTR_7g451170 42.157 102 58 1 17 118 191 291 2.27e-22 97.1
MS.gene056908.t1 MTR_7g037260 42.202 109 61 2 17 125 145 251 3.01e-22 96.3
MS.gene056908.t1 MTR_4g088015 41.584 101 58 1 17 117 221 320 9.54e-22 95.9
MS.gene056908.t1 MTR_7g450950 38.261 115 70 1 17 131 157 270 8.07e-21 92.0
MS.gene056908.t1 MTR_5g010650 44.118 102 56 1 11 112 104 204 5.33e-20 90.9
MS.gene056908.t1 MTR_3g089045 42.593 108 59 2 17 123 16 121 6.36e-20 88.6
MS.gene056908.t1 MTR_7g037130 39.450 109 64 2 17 125 145 251 6.78e-19 86.7
MS.gene056908.t1 MTR_7g086960 42.157 102 58 1 17 118 89 189 1.36e-18 85.9
MS.gene056908.t1 MTR_0023s0210 49.383 81 41 0 11 91 3 83 4.47e-18 78.2
MS.gene056908.t1 MTR_7g061550 39.362 94 55 1 20 111 10 103 8.42e-16 77.8
MS.gene056908.t1 MTR_5g038910 36.634 101 63 1 20 120 29 128 9.05e-16 77.8
MS.gene056908.t1 MTR_5g038910 36.634 101 63 1 20 120 29 128 1.14e-15 77.8
MS.gene056908.t1 MTR_8g468380 36.283 113 70 2 20 131 25 136 2.00e-15 77.0
MS.gene056908.t1 MTR_8g017480 64.444 45 16 0 11 55 8 52 2.94e-15 69.7
MS.gene056908.t1 MTR_6g055910 51.515 66 29 1 73 135 2 67 1.92e-14 71.6
MS.gene056908.t1 MTR_4g063100 50.000 56 28 0 73 128 1 56 9.94e-14 69.3
MS.gene056908.t1 MTR_2g096380 42.308 78 32 1 73 137 1 78 2.78e-13 67.4
MS.gene056908.t1 MTR_1g008970 36.145 83 53 0 37 119 110 192 7.12e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056908.t1 AT3G08500 46.260 361 141 13 1 331 3 340 2.91e-75 235
MS.gene056908.t1 AT5G12870 82.540 126 19 1 1 123 1 126 3.91e-71 223
MS.gene056908.t1 AT1G09540 79.439 107 22 0 14 120 11 117 6.53e-59 194
MS.gene056908.t1 AT5G26660 79.439 107 22 0 14 120 11 117 7.95e-58 191
MS.gene056908.t1 AT1G57560 78.302 106 23 0 14 119 11 116 1.07e-57 189
MS.gene056908.t1 AT1G57560 78.302 106 23 0 14 119 11 116 1.21e-57 187
MS.gene056908.t1 AT3G13890 75.229 109 27 0 11 119 8 116 1.52e-57 190
MS.gene056908.t1 AT4G01680 77.570 107 24 0 14 120 11 117 2.47e-57 186
MS.gene056908.t1 AT4G01680 77.570 107 24 0 14 120 11 117 1.97e-56 186
MS.gene056908.t1 AT3G13890 69.492 118 27 1 11 119 8 125 1.46e-54 182
MS.gene056908.t1 AT1G63910 68.182 110 35 0 11 120 8 117 5.54e-53 179
MS.gene056908.t1 AT4G01680 69.748 119 24 1 14 120 11 129 6.13e-53 178
MS.gene056908.t1 AT3G12720 67.925 106 34 0 14 119 21 126 3.97e-50 169
MS.gene056908.t1 AT4G05100 68.519 108 34 0 15 122 13 120 8.60e-50 169
MS.gene056908.t1 AT4G21440 68.519 108 34 0 15 122 12 119 2.68e-49 168
MS.gene056908.t1 AT2G16720 51.829 164 66 2 17 178 14 166 5.54e-49 165
MS.gene056908.t1 AT5G54230 67.593 108 35 0 15 122 12 119 1.34e-48 166
MS.gene056908.t1 AT1G22640 61.864 118 43 1 13 130 10 125 3.37e-48 163
MS.gene056908.t1 AT3G02940 56.061 132 51 1 11 142 8 132 5.71e-48 164
MS.gene056908.t1 AT5G10280 63.393 112 41 0 11 122 8 119 8.01e-48 164
MS.gene056908.t1 AT3G02940 56.061 132 51 1 11 142 8 132 9.96e-48 163
MS.gene056908.t1 AT3G02940 56.061 132 51 1 11 142 8 132 9.96e-48 163
MS.gene056908.t1 AT4G12350 63.717 113 41 0 15 127 12 124 1.05e-47 162
MS.gene056908.t1 AT4G09460 66.990 103 34 0 17 119 14 116 1.12e-47 160
MS.gene056908.t1 AT4G34990 67.961 103 33 0 17 119 14 116 1.38e-47 162
MS.gene056908.t1 AT3G01140 65.741 108 37 0 15 122 12 119 2.25e-47 163
MS.gene056908.t1 AT4G38620 66.667 105 35 0 17 121 14 118 4.85e-47 160
MS.gene056908.t1 AT5G65230 64.815 108 38 0 15 122 12 119 5.05e-47 161
MS.gene056908.t1 AT4G28110 66.667 105 35 0 15 119 12 116 6.40e-47 160
MS.gene056908.t1 AT3G01140 63.393 112 41 0 11 122 51 162 6.44e-47 163
MS.gene056908.t1 AT5G15310 64.815 108 38 0 15 122 12 119 7.80e-47 159
MS.gene056908.t1 AT5G15310 64.815 108 38 0 15 122 12 119 8.85e-47 160
MS.gene056908.t1 AT5G15310 64.815 108 38 0 15 122 12 119 9.32e-47 161
MS.gene056908.t1 AT5G61420 46.988 166 87 1 15 180 12 176 1.20e-46 162
MS.gene056908.t1 AT5G60890 53.125 128 56 1 15 138 12 139 2.23e-46 159
MS.gene056908.t1 AT3G48920 64.815 108 38 0 10 117 13 120 2.75e-46 158
MS.gene056908.t1 AT2G31180 53.147 143 64 2 15 156 12 152 3.33e-46 157
MS.gene056908.t1 AT5G14340 56.923 130 53 1 15 141 24 153 5.36e-46 157
MS.gene056908.t1 AT5G14750 57.500 120 50 1 1 119 1 120 5.71e-46 155
MS.gene056908.t1 AT1G66230 65.741 108 37 0 15 122 12 119 7.33e-46 157
MS.gene056908.t1 AT4G25560 63.025 119 43 1 6 123 1 119 1.05e-45 157
MS.gene056908.t1 AT1G34670 62.963 108 40 0 15 122 12 119 1.82e-45 159
MS.gene056908.t1 AT3G61250 62.037 108 41 0 15 122 12 119 2.35e-45 157
MS.gene056908.t1 AT3G27920 48.649 148 70 1 10 157 9 150 2.52e-45 154
MS.gene056908.t1 AT5G16600 63.889 108 39 0 15 122 12 119 2.96e-45 157
MS.gene056908.t1 AT3G23250 42.286 175 99 1 15 189 12 184 3.41e-45 155
MS.gene056908.t1 AT5G16770 54.688 128 51 1 15 142 12 132 3.96e-45 157
MS.gene056908.t1 AT5G16770 54.688 128 51 1 15 142 12 132 3.96e-45 157
MS.gene056908.t1 AT1G35515 60.550 109 43 0 13 121 10 118 5.93e-45 153
MS.gene056908.t1 AT5G16770 54.688 128 51 1 15 142 12 132 6.30e-45 156
MS.gene056908.t1 AT5G16770 54.688 128 51 1 15 142 12 132 6.30e-45 156
MS.gene056908.t1 AT1G74430 64.762 105 37 0 15 119 12 116 6.75e-45 154
MS.gene056908.t1 AT3G27810 45.087 173 75 3 13 179 18 176 7.40e-45 153
MS.gene056908.t1 AT1G18570 64.762 105 37 0 15 119 13 117 7.73e-45 157
MS.gene056908.t1 AT4G22680 62.963 108 40 0 15 122 12 119 1.04e-44 154
MS.gene056908.t1 AT5G52600 43.503 177 90 2 5 173 2 176 1.28e-44 152
MS.gene056908.t1 AT5G52260 69.903 103 31 0 16 118 13 115 1.95e-44 153
MS.gene056908.t1 AT1G06180 66.667 105 35 0 15 119 12 116 1.97e-44 152
MS.gene056908.t1 AT5G40330 48.951 143 68 1 16 158 13 150 2.64e-44 151
MS.gene056908.t1 AT3G01530 56.452 124 53 1 3 125 12 135 9.42e-44 149
MS.gene056908.t1 AT2G47460 61.111 108 42 0 15 122 12 119 2.52e-43 153
MS.gene056908.t1 AT5G56110 60.550 109 43 0 15 123 12 120 3.84e-43 151
MS.gene056908.t1 AT5G07690 54.331 127 56 1 15 141 12 136 5.25e-43 151
MS.gene056908.t1 AT5G07700 60.952 105 41 0 15 119 12 116 6.11e-43 151
MS.gene056908.t1 AT5G07700 60.952 105 41 0 15 119 12 116 6.11e-43 151
MS.gene056908.t1 AT5G40350 57.407 108 46 0 12 119 14 121 6.14e-43 148
MS.gene056908.t1 AT1G56160 54.135 133 61 0 14 146 13 145 6.75e-43 150
MS.gene056908.t1 AT4G17785 60.185 108 43 0 15 122 13 120 9.38e-43 151
MS.gene056908.t1 AT1G79180 56.000 125 55 0 11 135 10 134 1.06e-42 149
MS.gene056908.t1 AT4G17785 60.185 108 43 0 15 122 13 120 1.24e-42 151
MS.gene056908.t1 AT1G16490 45.614 171 78 2 11 169 10 177 1.72e-42 148
MS.gene056908.t1 AT3G62610 56.198 121 48 1 15 130 12 132 4.23e-42 149
MS.gene056908.t1 AT5G62320 45.833 168 63 3 15 175 13 159 1.26e-41 145
MS.gene056908.t1 AT1G68320 36.000 275 158 9 12 277 16 281 1.56e-41 146
MS.gene056908.t1 AT5G49330 61.905 105 40 0 15 119 12 116 3.24e-41 147
MS.gene056908.t1 AT5G35550 45.732 164 85 1 14 177 13 172 3.71e-41 144
MS.gene056908.t1 AT3G13540 57.143 105 45 0 15 119 23 127 5.59e-41 144
MS.gene056908.t1 AT3G12820 58.716 109 45 0 11 119 10 118 6.13e-41 143
MS.gene056908.t1 AT1G74080 60.952 105 41 0 15 119 12 116 8.51e-41 145
MS.gene056908.t1 AT3G47600 51.799 139 64 2 15 153 12 147 9.66e-41 145
MS.gene056908.t1 AT3G30210 62.037 108 41 0 16 123 28 135 1.97e-40 143
MS.gene056908.t1 AT1G18710 58.095 105 44 0 15 119 12 116 2.16e-40 143
MS.gene056908.t1 AT1G08810 59.048 105 43 0 15 119 12 116 5.71e-40 142
MS.gene056908.t1 AT3G24310 61.321 106 41 0 16 121 19 124 6.07e-40 142
MS.gene056908.t1 AT1G48000 44.805 154 77 2 14 164 31 179 1.20e-39 140
MS.gene056908.t1 AT5G62470 56.481 108 47 0 15 122 12 119 1.42e-39 143
MS.gene056908.t1 AT4G26930 42.857 168 92 1 15 182 19 182 1.59e-39 144
MS.gene056908.t1 AT1G74650 57.798 109 46 0 14 122 11 119 2.15e-39 142
MS.gene056908.t1 AT4G13480 57.658 111 47 0 16 126 7 117 2.20e-39 140
MS.gene056908.t1 AT5G55020 57.547 106 45 0 15 120 26 131 2.74e-39 145
MS.gene056908.t1 AT2G47190 49.600 125 63 0 10 134 15 139 3.18e-39 140
MS.gene056908.t1 AT2G26960 43.293 164 82 2 17 170 22 184 3.95e-39 143
MS.gene056908.t1 AT3G49690 57.143 112 47 1 11 121 8 119 5.13e-39 140
MS.gene056908.t1 AT2G32460 56.604 106 46 0 15 120 18 123 5.39e-39 144
MS.gene056908.t1 AT5G26660 78.481 79 17 0 42 120 8 86 5.40e-39 140
MS.gene056908.t1 AT3G28470 59.223 103 42 0 11 113 8 110 6.09e-39 140
MS.gene056908.t1 AT2G32460 56.604 106 46 0 15 120 6 111 6.30e-39 144
MS.gene056908.t1 AT5G06100 57.547 106 45 0 15 120 32 137 6.63e-39 143
MS.gene056908.t1 AT5G65790 56.250 112 48 1 11 121 8 119 1.33e-38 141
MS.gene056908.t1 AT3G28910 54.464 112 51 0 15 126 12 123 1.53e-38 139
MS.gene056908.t1 AT5G06100 57.547 106 45 0 15 120 32 137 2.15e-38 143
MS.gene056908.t1 AT5G06100 57.547 106 45 0 15 120 32 137 2.15e-38 143
MS.gene056908.t1 AT5G06100 57.547 106 45 0 15 120 32 137 2.15e-38 143
MS.gene056908.t1 AT5G06100 57.547 106 45 0 15 120 32 137 2.15e-38 143
MS.gene056908.t1 AT1G25340 54.206 107 49 0 16 122 19 125 2.20e-38 138
MS.gene056908.t1 AT3G11440 54.630 108 49 0 13 120 39 146 5.32e-38 141
MS.gene056908.t1 AT5G62470 56.481 108 46 1 15 122 12 118 1.01e-37 138
MS.gene056908.t1 AT3G11440 54.630 108 49 0 13 120 39 146 1.76e-37 141
MS.gene056908.t1 AT3G11440 54.630 108 49 0 13 120 39 146 1.76e-37 141
MS.gene056908.t1 AT3G11440 54.630 108 49 0 13 120 39 146 1.76e-37 141
MS.gene056908.t1 AT5G23000 45.270 148 59 2 13 138 10 157 3.78e-37 136
MS.gene056908.t1 AT1G79180 44.937 158 54 1 11 135 10 167 7.45e-37 135
MS.gene056908.t1 AT3G06490 57.407 108 46 0 15 122 19 126 7.74e-37 135
MS.gene056908.t1 AT5G57620 56.604 106 45 1 15 119 12 117 1.24e-36 134
MS.gene056908.t1 AT5G59780 52.212 113 54 0 16 128 9 121 5.55e-36 130
MS.gene056908.t1 AT3G46130 51.327 113 55 0 16 128 10 122 9.63e-36 130
MS.gene056908.t1 AT3G53200 54.128 109 50 0 10 118 4 112 5.21e-35 128
MS.gene056908.t1 AT2G36890 51.818 110 52 1 11 119 8 117 1.84e-34 128
MS.gene056908.t1 AT2G36890 51.818 110 52 1 11 119 49 158 3.81e-34 128
MS.gene056908.t1 AT5G49620 51.786 112 54 0 15 126 26 137 5.70e-34 127
MS.gene056908.t1 AT4G37780 52.830 106 49 1 15 119 12 117 6.73e-34 127
MS.gene056908.t1 AT1G25340 51.402 107 47 1 16 122 19 120 1.56e-33 125
MS.gene056908.t1 AT1G66370 50.909 110 54 0 9 118 2 111 2.36e-33 124
MS.gene056908.t1 AT1G25340 51.402 107 47 1 16 122 19 120 3.04e-33 125
MS.gene056908.t1 AT2G26950 45.378 119 64 1 17 135 18 135 2.65e-32 124
MS.gene056908.t1 AT5G35550 47.407 135 67 1 43 177 45 175 3.11e-32 121
MS.gene056908.t1 AT3G27810 44.928 138 56 3 48 179 4 127 9.25e-32 117
MS.gene056908.t1 AT3G47600 49.606 127 57 3 27 153 22 141 1.02e-31 121
MS.gene056908.t1 AT1G66380 48.819 127 57 1 15 133 8 134 3.29e-31 115
MS.gene056908.t1 AT3G60460 49.206 126 58 3 1 125 1 121 8.11e-31 118
MS.gene056908.t1 AT5G49620 46.032 126 54 1 15 126 26 151 2.16e-30 117
MS.gene056908.t1 AT3G12820 72.464 69 19 0 51 119 2 70 2.40e-30 114
MS.gene056908.t1 AT5G14750 68.116 69 22 0 51 119 18 86 3.68e-30 113
MS.gene056908.t1 AT5G40350 63.514 74 27 0 46 119 3 76 5.54e-30 112
MS.gene056908.t1 AT1G56650 54.808 104 47 0 15 118 8 111 6.87e-30 114
MS.gene056908.t1 AT1G66390 54.808 104 47 0 15 118 8 111 3.90e-29 112
MS.gene056908.t1 AT3G46130 57.317 82 35 0 47 128 9 90 6.51e-29 111
MS.gene056908.t1 AT5G59780 58.025 81 34 0 48 128 20 100 1.06e-28 110
MS.gene056908.t1 AT3G46130 58.025 81 34 0 48 128 20 100 1.43e-28 110
MS.gene056908.t1 AT3G53200 64.789 71 25 0 48 118 9 79 3.28e-27 106
MS.gene056908.t1 AT5G11050 28.899 218 143 3 17 232 105 312 1.58e-26 108
MS.gene056908.t1 AT3G50060 40.625 128 75 1 17 144 6 132 6.72e-26 105
MS.gene056908.t1 AT5G67300 42.063 126 63 2 17 142 6 121 8.39e-26 105
MS.gene056908.t1 AT4G18770 40.426 141 80 3 13 152 213 350 1.14e-25 106
MS.gene056908.t1 AT3G55730 38.922 167 92 4 17 181 56 214 1.14e-25 106
MS.gene056908.t1 AT5G40360 40.678 118 68 2 10 127 151 266 1.46e-25 105
MS.gene056908.t1 AT3G09230 43.284 134 71 2 8 137 46 178 2.16e-25 105
MS.gene056908.t1 AT2G39880 49.107 112 55 2 7 118 41 150 6.91e-25 103
MS.gene056908.t1 AT4G37260 46.789 109 57 1 10 118 6 113 7.16e-25 102
MS.gene056908.t1 AT1G69560 31.250 208 124 5 11 204 101 303 8.98e-25 102
MS.gene056908.t1 AT5G02320 42.623 122 67 2 12 131 62 182 1.09e-24 104
MS.gene056908.t1 AT3G27785 42.857 119 63 3 1 118 175 289 1.09e-24 103
MS.gene056908.t1 AT5G02320 42.623 122 67 2 12 131 122 242 1.24e-24 104
MS.gene056908.t1 AT5G02320 42.623 122 67 2 12 131 122 242 1.24e-24 104
MS.gene056908.t1 AT1G69560 31.250 208 124 5 11 204 117 319 1.33e-24 102
MS.gene056908.t1 AT1G22640 65.714 70 22 1 61 130 1 68 1.56e-24 99.4
MS.gene056908.t1 AT5G58850 40.602 133 73 3 7 134 94 225 6.84e-24 101
MS.gene056908.t1 AT3G09370 45.794 107 57 1 12 118 125 230 7.04e-24 102
MS.gene056908.t1 AT3G09370 45.794 107 57 1 12 118 130 235 7.49e-24 102
MS.gene056908.t1 AT3G09370 45.794 107 57 1 12 118 138 243 1.00e-23 102
MS.gene056908.t1 AT2G23290 47.059 102 53 1 17 118 13 113 1.70e-23 99.0
MS.gene056908.t1 AT3G23250 65.574 61 21 0 61 121 1 61 2.72e-23 96.7
MS.gene056908.t1 AT1G17950 43.925 107 59 1 17 123 5 110 4.03e-23 96.7
MS.gene056908.t1 AT1G26780 44.144 111 59 2 15 124 96 204 5.40e-23 98.2
MS.gene056908.t1 AT1G26780 44.144 111 59 2 15 124 96 204 5.87e-23 97.1
MS.gene056908.t1 AT5G11510 43.519 108 60 1 12 119 76 182 6.69e-23 100
MS.gene056908.t1 AT5G11510 43.519 108 60 1 12 119 76 182 6.69e-23 100
MS.gene056908.t1 AT5G11510 43.519 108 60 1 12 119 76 182 6.69e-23 100
MS.gene056908.t1 AT2G25230 42.991 107 59 2 20 126 29 133 7.82e-23 95.5
MS.gene056908.t1 AT5G11510 43.519 108 60 1 12 119 76 182 8.56e-23 99.8
MS.gene056908.t1 AT5G11510 43.519 108 60 1 12 119 76 182 9.61e-23 99.8
MS.gene056908.t1 AT1G66380 50.526 95 39 1 47 133 7 101 1.08e-22 91.3
MS.gene056908.t1 AT3G29020 37.500 128 78 2 17 144 65 190 4.45e-22 93.6
MS.gene056908.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.65e-22 97.4
MS.gene056908.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.65e-22 97.4
MS.gene056908.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.65e-22 97.4
MS.gene056908.t1 AT4G32730 41.667 108 62 1 12 119 82 188 6.65e-22 97.4
MS.gene056908.t1 AT4G32730 41.667 108 62 1 12 119 82 188 7.02e-22 97.1
MS.gene056908.t1 AT3G29020 37.500 128 78 2 17 144 67 192 9.31e-22 94.0
MS.gene056908.t1 AT5G14750 62.712 59 22 0 61 119 1 59 3.31e-21 88.6
MS.gene056908.t1 AT5G14750 62.712 59 22 0 61 119 1 59 3.31e-21 88.6
MS.gene056908.t1 AT1G73410 43.925 107 59 1 17 123 6 111 3.83e-21 91.3
MS.gene056908.t1 AT5G17800 39.823 113 67 1 8 120 84 195 6.04e-21 92.0
MS.gene056908.t1 AT4G33450 38.393 112 68 1 16 127 18 128 7.45e-21 90.5
MS.gene056908.t1 AT1G73410 43.519 108 60 1 17 124 6 112 1.11e-20 89.0
MS.gene056908.t1 AT1G71030 55.072 69 31 0 54 122 5 73 5.02e-20 86.7
MS.gene056908.t1 AT1G71030 55.072 69 31 0 54 122 19 87 7.77e-20 86.3
MS.gene056908.t1 AT4G00540 41.739 115 61 3 15 125 101 213 5.03e-19 87.4
MS.gene056908.t1 AT1G18960 39.815 108 58 4 17 122 10 112 8.87e-19 85.9
MS.gene056908.t1 AT4G00540 41.739 115 61 3 15 125 99 211 9.50e-19 87.0
MS.gene056908.t1 AT5G40430 37.302 126 74 4 3 126 38 160 1.04e-18 84.7
MS.gene056908.t1 AT2G02820 40.196 102 60 1 20 121 33 133 2.37e-18 84.7
MS.gene056908.t1 AT2G02820 40.196 102 60 1 20 121 33 133 2.44e-18 85.9
MS.gene056908.t1 AT2G02820 40.196 102 60 1 20 121 33 133 3.72e-18 85.5
MS.gene056908.t1 AT1G66380 53.846 78 36 0 15 92 8 85 4.11e-18 79.3
MS.gene056908.t1 AT2G37630 38.017 121 72 2 20 137 7 127 6.70e-17 81.3
MS.gene056908.t1 AT5G39700 33.088 136 84 2 13 148 52 180 3.61e-16 76.3
MS.gene056908.t1 AT1G14350 38.235 102 62 1 20 121 28 128 6.34e-16 78.6
MS.gene056908.t1 AT1G14350 38.235 102 62 1 20 121 28 128 6.34e-16 78.6
MS.gene056908.t1 AT5G59780 50.000 56 28 0 73 128 1 56 6.51e-14 69.3
MS.gene056908.t1 AT3G46130 50.000 56 28 0 73 128 1 56 1.07e-13 69.3
MS.gene056908.t1 AT4G25560 64.706 51 17 1 74 123 3 53 3.30e-13 68.2
MS.gene056908.t1 AT1G74650 64.286 42 15 0 81 122 2 43 8.56e-12 64.7
MS.gene056908.t1 AT5G61420 39.175 97 58 1 84 180 2 97 1.28e-11 64.7
MS.gene056908.t1 AT1G14350 44.444 63 35 0 59 121 23 85 1.65e-11 65.1
MS.gene056908.t1 AT1G14350 44.444 63 35 0 59 121 23 85 1.65e-11 65.1
MS.gene056908.t1 AT3G28910 64.103 39 14 0 81 119 2 40 2.47e-11 63.5

Find 51 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATTTGCATTCCCTTCT+TGG 0.153405 4.2:+40181774 MS.gene056908:CDS
TGACAGCAAAAGTTTCTATT+TGG 0.177929 4.2:+40183674 MS.gene056908:CDS
CCTATATTATGGTCTTTGTT+AGG 0.192944 4.2:-40183465 None:intergenic
AATACCATTATGTCTGGTTC+TGG 0.257266 4.2:+40183597 MS.gene056908:CDS
ACAATGAAATCAAGAACTTT+TGG 0.281358 4.2:+40183364 MS.gene056908:CDS
GGGAGTGTAAATATTATTAA+TGG 0.283826 4.2:+40183708 MS.gene056908:CDS
ATTTCATTGTCTGTTCTTCC+AGG 0.287022 4.2:-40183351 None:intergenic
TGCATTCCCTTCTTGGAAAC+AGG 0.336319 4.2:+40181781 MS.gene056908:CDS
TTATAAAACCTCCTATATTA+TGG 0.343826 4.2:-40183476 None:intergenic
GAGATTTATCTGTTGGAGAT+TGG 0.356328 4.2:+40183973 MS.gene056908:CDS
CAAATTGCGGCGCGCTTACC+TGG 0.371371 4.2:+40183333 MS.gene056908:CDS
CTATATTATGGTCTTTGTTA+GGG 0.372088 4.2:-40183464 None:intergenic
ATCTGTTGGAGATTGGGATT+TGG 0.391051 4.2:+40183980 MS.gene056908:CDS
AGATTTATCTGTTGGAGATT+GGG 0.394773 4.2:+40183974 MS.gene056908:CDS
AATATTATTAATGGTGTAGA+AGG 0.397124 4.2:+40183717 MS.gene056908:CDS
TAAATAGTGGACAAGGTTGT+TGG 0.399936 4.2:+40181628 MS.gene056908:CDS
ATACCATTATGTCTGGTTCT+GGG 0.402889 4.2:+40183598 MS.gene056908:CDS
GAGGTGGAGAATTTATTTCA+TGG 0.406594 4.2:+40183951 MS.gene056908:CDS
GAAGATTCATCGCTTGCGTT+TGG 0.416241 4.2:-40183435 None:intergenic
CCTAACAAAGACCATAATAT+AGG 0.430327 4.2:+40183465 MS.gene056908:CDS
ATTATGTCTGGTTCTGGGTG+TGG 0.433859 4.2:+40183603 MS.gene056908:CDS
TTTCATGGAGATTTATCTGT+TGG 0.445436 4.2:+40183966 MS.gene056908:CDS
ATAAGCTTCTCATCTTCCTC+TGG 0.451621 4.2:-40181594 None:intergenic
ACACCCAGAACCAGACATAA+TGG 0.452955 4.2:-40183601 None:intergenic
AACAACTCTAAGCTTAGAAA+AGG 0.456430 4.2:+40181561 MS.gene056908:CDS
AGGAAGCCAGAGATTGCATC+TGG 0.463580 4.2:+40181534 MS.gene056908:CDS
TTCCAAGAAGGGAATGCAAA+TGG 0.481023 4.2:-40181776 None:intergenic
TGGTGTAGAAGGAGATGAGA+TGG 0.483693 4.2:+40183728 MS.gene056908:CDS
ATGAACTACATGTTAAATAG+TGG 0.487097 4.2:+40181615 MS.gene056908:CDS
TTCTTCAATAATAGTACTAC+AGG 0.501923 4.2:+40183627 MS.gene056908:CDS
AGTGATGTTGCTAGAAATGC+TGG 0.514684 4.2:+40181651 MS.gene056908:CDS
AATGCACCACGTTTAAGATC+AGG 0.532050 4.2:-40181726 None:intergenic
AATGCATGCAATGGAGAAGA+TGG 0.536091 4.2:+40183828 MS.gene056908:CDS
TCAAAGATGGTCTCAAATTG+CGG 0.554550 4.2:+40183320 MS.gene056908:intron
AAGTGGACCTGTTTCCAAGA+AGG 0.565199 4.2:-40181788 None:intergenic
AGTGGACCTGTTTCCAAGAA+GGG 0.574708 4.2:-40181787 None:intergenic
AACAAAGACCATAATATAGG+AGG 0.580798 4.2:+40183468 MS.gene056908:CDS
GGAGATGAAGTATTGAACAT+AGG 0.583399 4.2:-40183543 None:intergenic
CTAAGCTTAGAAAAGGATTG+TGG 0.585725 4.2:+40181568 MS.gene056908:CDS
ATGATATGTTCTTCTTCCTG+TGG 0.588188 4.2:-40181753 None:intergenic
TAGAGCTGATCATGATGAGG+TGG 0.613651 4.2:+40183935 MS.gene056908:CDS
AATGCTGGATTGCAAAGATG+TGG 0.617901 4.2:+40181666 MS.gene056908:CDS
TAAGATGGATCAATTACTTG+AGG 0.619133 4.2:+40181703 MS.gene056908:CDS
ACGTGGTGCATTCTCACCAC+AGG 0.629748 4.2:+40181737 MS.gene056908:CDS
AAAAGGATTGTGGTCACCAG+AGG 0.635321 4.2:+40181578 MS.gene056908:CDS
AAAATGGAGAATGCATGCAA+TGG 0.638345 4.2:+40183819 MS.gene056908:CDS
TTAGTATTAACACTCTCTAG+AGG 0.641496 4.2:-40183768 None:intergenic
GTATTAACACTCTCTAGAGG+AGG 0.651371 4.2:-40183765 None:intergenic
TACATGTTAAATAGTGGACA+AGG 0.672810 4.2:+40181621 MS.gene056908:CDS
TTGAGGCCTGATCTTAAACG+TGG 0.683943 4.2:+40181720 MS.gene056908:CDS
AAATAGAGCTGATCATGATG+AGG 0.716489 4.2:+40183932 MS.gene056908:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATAATAATAAAAAAA+AGG + chr4.2:40182114-40182133 MS.gene056908:intron 0.0%
!! TAAAAAAAAATCTAAATCTT+TGG - chr4.2:40182471-40182490 None:intergenic 10.0%
!!! TTCATCATTTTATTAAAAAT+TGG - chr4.2:40182095-40182114 None:intergenic 10.0%
!! TTCAATATAATAAATGATTC+AGG - chr4.2:40182382-40182401 None:intergenic 15.0%
!! TTCTCAAATTAAGATAAATT+TGG - chr4.2:40181909-40181928 None:intergenic 15.0%
!! AATATTATTAATGGTGTAGA+AGG + chr4.2:40183717-40183736 MS.gene056908:CDS 20.0%
!! ATATTATACATACTCATGTT+TGG - chr4.2:40182035-40182054 None:intergenic 20.0%
!! ATGAGTATGTATAATATACA+TGG + chr4.2:40182038-40182057 MS.gene056908:intron 20.0%
!! TACAATTGAAAACAACATAT+AGG + chr4.2:40182899-40182918 MS.gene056908:intron 20.0%
!! TCTATTTGGAAAAAATGTTT+GGG + chr4.2:40183688-40183707 MS.gene056908:CDS 20.0%
!! TTATAAAACCTCCTATATTA+TGG - chr4.2:40183479-40183498 None:intergenic 20.0%
!! TTCTATTTGGAAAAAATGTT+TGG + chr4.2:40183687-40183706 MS.gene056908:CDS 20.0%
!! TTTACTGTCTATTTCATAAA+TGG + chr4.2:40183098-40183117 MS.gene056908:intron 20.0%
!!! CATCTTTAAAACATTTTTTG+AGG - chr4.2:40182065-40182084 None:intergenic 20.0%
!!! CTCAAAAAATGTTTTAAAGA+TGG + chr4.2:40182063-40182082 MS.gene056908:intron 20.0%
!!! GATAAATAAATTGATGATCT+AGG - chr4.2:40181824-40181843 None:intergenic 20.0%
!!! TACATAGCTATTTTTTTTCA+CGG - chr4.2:40182279-40182298 None:intergenic 20.0%
! AACAACAAACTTAAATCACT+TGG - chr4.2:40182655-40182674 None:intergenic 25.0%
! ACAACAAACTTAAATCACTT+GGG - chr4.2:40182654-40182673 None:intergenic 25.0%
! ACACACAACAATATAGTATA+TGG + chr4.2:40182317-40182336 MS.gene056908:intron 25.0%
! AGACAAACACATAAATGAAA+AGG + chr4.2:40182515-40182534 MS.gene056908:intron 25.0%
! AGATAACTTGAGAGAAAAAA+TGG - chr4.2:40182226-40182245 None:intergenic 25.0%
! ATGAACTACATGTTAAATAG+TGG + chr4.2:40181615-40181634 MS.gene056908:CDS 25.0%
! CAGTTTGAAAAATCAAGAAA+TGG - chr4.2:40184035-40184054 None:intergenic 25.0%
! CCAAATTTGATTCCATATAT+TGG + chr4.2:40181853-40181872 MS.gene056908:intron 25.0%
! CCAATATATGGAATCAAATT+TGG - chr4.2:40181856-40181875 None:intergenic 25.0%
! CTATATTATGGTCTTTGTTA+GGG - chr4.2:40183467-40183486 None:intergenic 25.0%
! TAAATTAAGGAGCCAATATA+TGG - chr4.2:40181868-40181887 None:intergenic 25.0%
! TAACTAAATAGTATTACGAG+AGG + chr4.2:40183147-40183166 MS.gene056908:intron 25.0%
! TTCTTCAATAATAGTACTAC+AGG + chr4.2:40183627-40183646 MS.gene056908:CDS 25.0%
! TTGTGAACATAGTGTAAAAA+TGG + chr4.2:40183803-40183822 MS.gene056908:CDS 25.0%
!! ACAATGAAATCAAGAACTTT+TGG + chr4.2:40183364-40183383 MS.gene056908:CDS 25.0%
!! ATCTCTAAAAAATAGTCTGA+AGG - chr4.2:40182188-40182207 None:intergenic 25.0%
!! GGGAGTGTAAATATTATTAA+TGG + chr4.2:40183708-40183727 MS.gene056908:CDS 25.0%
!!! AAAATGTTTTAAAGATGGAC+TGG + chr4.2:40182068-40182087 MS.gene056908:intron 25.0%
!!! ACATAGCTATTTTTTTTCAC+GGG - chr4.2:40182278-40182297 None:intergenic 25.0%
!!! GAAGATAACCATTTTTACAT+TGG + chr4.2:40181926-40181945 MS.gene056908:intron 25.0%
AAAGATGTGGAAAAAGTTGT+AGG + chr4.2:40181679-40181698 MS.gene056908:CDS 30.0%
AACAAAGACCATAATATAGG+AGG + chr4.2:40183468-40183487 MS.gene056908:CDS 30.0%
AACAACTCTAAGCTTAGAAA+AGG + chr4.2:40181561-40181580 MS.gene056908:CDS 30.0%
AATTAGTTGTGTCGTATCTT+AGG - chr4.2:40182782-40182801 None:intergenic 30.0%
ACTGTGATTTCGTCTTTATT+TGG + chr4.2:40182923-40182942 MS.gene056908:intron 30.0%
AGATTTATCTGTTGGAGATT+GGG + chr4.2:40183974-40183993 MS.gene056908:CDS 30.0%
ATAAAATTCACCTCTTGATG+AGG - chr4.2:40182252-40182271 None:intergenic 30.0%
ATAGTATTACGAGAGGAAAT+AGG + chr4.2:40183154-40183173 MS.gene056908:intron 30.0%
CAAACACATAAATGAAAAGG+AGG + chr4.2:40182518-40182537 MS.gene056908:intron 30.0%
CCTAACAAAGACCATAATAT+AGG + chr4.2:40183465-40183484 MS.gene056908:CDS 30.0%
CCTATATTATGGTCTTTGTT+AGG - chr4.2:40183468-40183487 None:intergenic 30.0%
CTCCTTAATTCACTATTTAG+TGG + chr4.2:40181949-40181968 MS.gene056908:intron 30.0%
GTCCACTAAATAGTGAATTA+AGG - chr4.2:40181954-40181973 None:intergenic 30.0%
TAAAATTCACCTCTTGATGA+GGG - chr4.2:40182251-40182270 None:intergenic 30.0%
TAAGATGGATCAATTACTTG+AGG + chr4.2:40181703-40181722 MS.gene056908:CDS 30.0%
TGACAGCAAAAGTTTCTATT+TGG + chr4.2:40183674-40183693 MS.gene056908:CDS 30.0%
TTAAGGAGCCAATGTAAAAA+TGG - chr4.2:40181937-40181956 None:intergenic 30.0%
TTAGTATTAACACTCTCTAG+AGG - chr4.2:40183771-40183790 None:intergenic 30.0%
TTTCATGGAGATTTATCTGT+TGG + chr4.2:40183966-40183985 MS.gene056908:CDS 30.0%
TTTGAACAATACACGTAGTA+TGG - chr4.2:40182968-40182987 None:intergenic 30.0%
! AAAACTGTGTTTTGCATTGT+TGG - chr4.2:40183576-40183595 None:intergenic 30.0%
! GTTTTCAATACCATTATGTC+TGG + chr4.2:40183591-40183610 MS.gene056908:CDS 30.0%
! TTGTACTTTTGTCTTCTACA+AGG - chr4.2:40182884-40182903 None:intergenic 30.0%
! TTGTGCTTCATTTTCAAAGA+TGG + chr4.2:40183307-40183326 MS.gene056908:intron 30.0%
!! TACATGTTAAATAGTGGACA+AGG + chr4.2:40181621-40181640 MS.gene056908:CDS 30.0%
AAAATGGAGAATGCATGCAA+TGG + chr4.2:40183819-40183838 MS.gene056908:CDS 35.0%
AAATAGAGCTGATCATGATG+AGG + chr4.2:40183932-40183951 MS.gene056908:CDS 35.0%
AAATTGTCTGCCTCTCTAAA+TGG - chr4.2:40182715-40182734 None:intergenic 35.0%
ATCAGCTTATGATGTGTCTA+TGG - chr4.2:40182428-40182447 None:intergenic 35.0%
ATCTAGGTAGAAAAGTGAAG+TGG - chr4.2:40181808-40181827 None:intergenic 35.0%
ATGATATGTTCTTCTTCCTG+TGG - chr4.2:40181756-40181775 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+AGG - chr4.2:40183354-40183373 None:intergenic 35.0%
CTAAGCTTAGAAAAGGATTG+TGG + chr4.2:40181568-40181587 MS.gene056908:CDS 35.0%
GAAAAAGTTGTAGGCTAAGA+TGG + chr4.2:40181688-40181707 MS.gene056908:CDS 35.0%
GAGATTTATCTGTTGGAGAT+TGG + chr4.2:40183973-40183992 MS.gene056908:CDS 35.0%
GAGGTGGAGAATTTATTTCA+TGG + chr4.2:40183951-40183970 MS.gene056908:CDS 35.0%
TCAAAGATGGTCTCAAATTG+CGG + chr4.2:40183320-40183339 MS.gene056908:intron 35.0%
! AATACCATTATGTCTGGTTC+TGG + chr4.2:40183597-40183616 MS.gene056908:CDS 35.0%
! GAGGCAGACAATTTTGTAAA+AGG + chr4.2:40182721-40182740 MS.gene056908:intron 35.0%
!! ATACCATTATGTCTGGTTCT+GGG + chr4.2:40183598-40183617 MS.gene056908:CDS 35.0%
!! GGAGATGAAGTATTGAACAT+AGG - chr4.2:40183546-40183565 None:intergenic 35.0%
!! TAAATAGTGGACAAGGTTGT+TGG + chr4.2:40181628-40181647 MS.gene056908:CDS 35.0%
!!! TTTTTTCCAGATGCAATCTC+TGG - chr4.2:40181543-40181562 None:intergenic 35.0%
AACAGTGCTTCCATTTAGAG+AGG + chr4.2:40182702-40182721 MS.gene056908:intron 40.0%
AATGCATGCAATGGAGAAGA+TGG + chr4.2:40183828-40183847 MS.gene056908:CDS 40.0%
AATGCTGGATTGCAAAGATG+TGG + chr4.2:40181666-40181685 MS.gene056908:CDS 40.0%
ACGAGAGGAAATAGGTCTAA+AGG + chr4.2:40183162-40183181 MS.gene056908:intron 40.0%
AGACACATCATAAGCTGATC+AGG + chr4.2:40182429-40182448 MS.gene056908:intron 40.0%
AGTGATGTTGCTAGAAATGC+TGG + chr4.2:40181651-40181670 MS.gene056908:CDS 40.0%
ATAAGCTTCTCATCTTCCTC+TGG - chr4.2:40181597-40181616 None:intergenic 40.0%
ATCCATTTGCATTCCCTTCT+TGG + chr4.2:40181774-40181793 MS.gene056908:CDS 40.0%
ATCTGTTGGAGATTGGGATT+TGG + chr4.2:40183980-40183999 MS.gene056908:CDS 40.0%
TTCCAAGAAGGGAATGCAAA+TGG - chr4.2:40181779-40181798 None:intergenic 40.0%
! AATGCACCACGTTTAAGATC+AGG - chr4.2:40181729-40181748 None:intergenic 40.0%
! ACTGTGTTTTGCATTGTTGG+TGG - chr4.2:40183573-40183592 None:intergenic 40.0%
! GTATTAACACTCTCTAGAGG+AGG - chr4.2:40183768-40183787 None:intergenic 40.0%
! TTGTGTCGTATCTTAGGTTG+AGG - chr4.2:40182776-40182795 None:intergenic 40.0%
!!! TTTTGCATTGTTGGTGGTGA+TGG - chr4.2:40183567-40183586 None:intergenic 40.0%
AAAAGGATTGTGGTCACCAG+AGG + chr4.2:40181578-40181597 MS.gene056908:CDS 45.0%
AAGTGGACCTGTTTCCAAGA+AGG - chr4.2:40181791-40181810 None:intergenic 45.0%
ACACCCAGAACCAGACATAA+TGG - chr4.2:40183604-40183623 None:intergenic 45.0%
AGTGGACCTGTTTCCAAGAA+GGG - chr4.2:40181790-40181809 None:intergenic 45.0%
ATAGGTCTAAAGGCCTCTAG+CGG + chr4.2:40183172-40183191 MS.gene056908:intron 45.0%
GAAGATTCATCGCTTGCGTT+TGG - chr4.2:40183438-40183457 None:intergenic 45.0%
GTTATCTCACCCTCATCAAG+AGG + chr4.2:40182239-40182258 MS.gene056908:intron 45.0%
TAGAGCTGATCATGATGAGG+TGG + chr4.2:40183935-40183954 MS.gene056908:CDS 45.0%
TGCATTCCCTTCTTGGAAAC+AGG + chr4.2:40181781-40181800 MS.gene056908:CDS 45.0%
TGGTGTAGAAGGAGATGAGA+TGG + chr4.2:40183728-40183747 MS.gene056908:CDS 45.0%
TTGAGGCCTGATCTTAAACG+TGG + chr4.2:40181720-40181739 MS.gene056908:CDS 45.0%
!! ATTATGTCTGGTTCTGGGTG+TGG + chr4.2:40183603-40183622 MS.gene056908:CDS 45.0%
!! TGTCGTATCTTAGGTTGAGG+AGG - chr4.2:40182773-40182792 None:intergenic 45.0%
!! ATAATAAGATAAATAAATTA+AGG - chr4.2:40181881-40181900 None:intergenic 5.0%
AGGAAGCCAGAGATTGCATC+TGG + chr4.2:40181534-40181553 MS.gene056908:CDS 50.0%
! ACAACAAACTGTGCCGCTAG+AGG - chr4.2:40183188-40183207 None:intergenic 50.0%
ACGTGGTGCATTCTCACCAC+AGG + chr4.2:40181737-40181756 MS.gene056908:CDS 55.0%
CAAATTGCGGCGCGCTTACC+TGG + chr4.2:40183333-40183352 MS.gene056908:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 40181531 40184055 40181531 ID=MS.gene056908
chr4.2 mRNA 40181531 40184055 40181531 ID=MS.gene056908.t1;Parent=MS.gene056908
chr4.2 exon 40181531 40181802 40181531 ID=MS.gene056908.t1.exon1;Parent=MS.gene056908.t1
chr4.2 CDS 40181531 40181802 40181531 ID=cds.MS.gene056908.t1;Parent=MS.gene056908.t1
chr4.2 exon 40183326 40184055 40183326 ID=MS.gene056908.t1.exon2;Parent=MS.gene056908.t1
chr4.2 CDS 40183326 40184055 40183326 ID=cds.MS.gene056908.t1;Parent=MS.gene056908.t1
Gene Sequence

>MS.gene056908

ATGAGGAAGCCAGAGATTGCATCTGGAAAAAACAACTCTAAGCTTAGAAAAGGATTGTGGTCACCAGAGGAAGATGAGAAGCTTATGAACTACATGTTAAATAGTGGACAAGGTTGTTGGAGTGATGTTGCTAGAAATGCTGGATTGCAAAGATGTGGAAAAAGTTGTAGGCTAAGATGGATCAATTACTTGAGGCCTGATCTTAAACGTGGTGCATTCTCACCACAGGAAGAAGAACATATCATCCATTTGCATTCCCTTCTTGGAAACAGGTCCACTTCACTTTTCTACCTAGATCATCAATTTATTTATCTTATTAGTACCAAATTTGATTCCATATATTGGCTCCTTAATTTATTTATCTTATTATTAGTACCAAATTTATCTTAATTTGAGAAGATAACCATTTTTACATTGGCTCCTTAATTCACTATTTAGTGGACATAAAGAGATATCAACTGTGAACTAATAATAAATATATTACATATATATTTGTATGCACCAAACATGAGTATGTATAATATACATGGACCTCAAAAAATGTTTTAAAGATGGACTGGACCAATTTTTAATAAAATGATGAATTTTATAATAATAAAAAAAAGGAAGAGATGTAGTATTTCATTAAAATTTATTAAAAAATGTAAATATTCACCTTCAGACTATTTTTTAGAGATTTATAATTTGATACACCATTTTTTCTCTCAAGTTATCTCACCCTCATCAAGAGGTGAATTTTATATTCCCGTGAAAAAAAATAGCTATGTATATCTTAAAAAAAAATGTACACACAACAATATAGTATATGGTGTCATGTTGTACAAAATTGTTTCTAAAAAAAATGTGTTCCTGAATCATTTATTATATTGAAAATATAGAATTATCACAAAAAGTCCATAGACACATCATAAGCTGATCAGGACTTGTGTAGTCACAACCAAAGATTTAGATTTTTTTTTATCAAAAAAGAAAGATTTAGATTTTAGACAAACACATAAATGAAAAGGAGGAAAAAAAAATCAATTATATTATTATTATTTGAAAGAATTATTATTATTATTATTATTATTATTATTATTATTTATTGAATTAATTAATGAGCAGTTTTGTCGTGTGTGCACCCAAGTGATTTAAGTTTGTTGTTGTGATCATGCAAATTATTCTCATAAGCAACAGTGCTTCCATTTAGAGAGGCAGACAATTTTGTAAAAGGAAGTCTTTTTGTGTCAAAATTTAAGTCCTCCTCAACCTAAGATACGACACAACTAATTCAAAGTTAAAAAATACATGCACAACATGCATCAAATATAATAATATTATTATTAATATATGTATATGATCAAGACAGCTCCTTGTAGAAGACAAAAGTACAATTGAAAACAACATATAGGCACTGTGATTTCGTCTTTATTTGGACTTCGAGTTGAAGACACTCCATACTACGTGTATTGTTCAAAAAAGACTAATTAACTTTCATGCAAAGCATGCATTCAATTTCAGTTTTAAAAAATTGACAGAAATTAATTAATAAACATATATGTAGTCATATATACTCAAGACAACTCTATTTACTGTCTATTTCATAAATGGTATTTTTTTTTATAAACAAAATTTATTAACTAAATAGTATTACGAGAGGAAATAGGTCTAAAGGCCTCTAGCGGCACAGTTTGTTGTTTGTTTGTCTTCTATTCATGTATAATCTTTGCTATTTTAAAAAGAAAATTATTTTTGTGCTATATATATATTTATGAATTATTAAGCAAACATATTAAATTGTGCTTCATTTTCAAAGATGGTCTCAAATTGCGGCGCGCTTACCTGGAAGAACAGACAATGAAATCAAGAACTTTTGGAATTCAACAATAAAGAAAAGACTCAAGAACATGTCGTCGAACACTTCACCAAACGCAAGCGATGAATCTTCGTACGACCCTAACAAAGACCATAATATAGGAGGTTTTATAACTTCTTCAACACAAGATCAACAACATATTGATAATCATTTTATGCCTATGTTCAATACTTCATCTCCATCACCACCAACAATGCAAAACACAGTTTTCAATACCATTATGTCTGGTTCTGGGTGTGGATTCTTCAATAATAGTACTACAGGAACATACTTGTCACAGAATAATCATGACAGCAAAAGTTTCTATTTGGAAAAAATGTTTGGGAGTGTAAATATTATTAATGGTGTAGAAGGAGATGAGATGGAAATTTACAATGTTCCTCCTCTAGAGAGTGTTAATACTAATAGTACTATTACTTGTGAACATAGTGTAAAAATGGAGAATGCATGCAATGGAGAAGATGGTAATTACAATAGTAGTTATAACTTTGATGACATAAACAACATTGTTATTAACAACTGCAATGTTGTTAGTAATAGAAGTGAAAATAGAGCTGATCATGATGAGGTGGAGAATTTATTTCATGGAGATTTATCTGTTGGAGATTGGGATTTGGAAGATTTGATGAAAGATGTTTCATCATTTCCATTTCTTGATTTTTCAAACTGA
Protein sequence

>MS.gene056908.t1

MRKPEIASGKNNSKLRKGLWSPEEDEKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEEHIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSNTSPNASDESSYDPNKDHNIGGFITSSTQDQQHIDNHFMPMFNTSSPSPPTMQNTVFNTIMSGSGCGFFNNSTTGTYLSQNNHDSKSFYLEKMFGSVNIINGVEGDEMEIYNVPPLESVNTNSTITCEHSVKMENACNGEDGNYNSSYNFDDINNIVINNCNVVSNRSENRADHDEVENLFHGDLSVGDWDLEDLMKDVSSFPFLDFSN