Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82929.t1 | XP_013450797.1 | 97.4 | 700 | 18 | 0 | 1 | 700 | 1 | 700 | 0.00E+00 | 1335.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82929.t1 | Q9LII8 | 64.1 | 679 | 215 | 11 | 17 | 691 | 2 | 655 | 2.0e-230 | 800.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82929.t1 | A0A072U668 | 97.4 | 700 | 18 | 0 | 1 | 700 | 1 | 700 | 0.0e+00 | 1335.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene82929 | 0.818399 | 2.00E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene82929 | 0.831651 | 1.48E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene82929 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene82929 | 0.802258 | 6.11E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene82929 | 0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene050376 | MS.gene82929 | 0.815727 | 7.97E-52 | -1.69E-46 |
| MS.gene050657 | MS.gene82929 | 0.802931 | 4.44E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene82929 | 0.811946 | 5.43E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene82929 | 0.868747 | 5.19E-66 | -1.69E-46 |
| MS.gene050808 | MS.gene82929 | 0.846975 | 1.55E-59 | -1.69E-46 |
| MS.gene050815 | MS.gene82929 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene82929 | 0.811271 | 7.61E-51 | -1.69E-46 |
| MS.gene051180 | MS.gene82929 | 0.817743 | 2.81E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene82929 | 0.807274 | 5.48E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene82929 | 0.827487 | 1.52E-54 | -1.69E-46 |
| MS.gene051328 | MS.gene82929 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene82929 | 0.852102 | 5.75E-61 | -1.69E-46 |
| MS.gene051577 | MS.gene82929 | 0.810972 | 8.83E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene82929 | 0.8078 | 4.23E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene82929 | 0.853986 | 1.66E-61 | -1.69E-46 |
| MS.gene051720 | MS.gene82929 | 0.833782 | 4.38E-56 | -1.69E-46 |
| MS.gene051800 | MS.gene82929 | 0.819371 | 1.20E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene82929 | 0.836493 | 9.06E-57 | -1.69E-46 |
| MS.gene052665 | MS.gene82929 | 0.863641 | 2.15E-64 | -1.69E-46 |
| MS.gene052863 | MS.gene82929 | 0.812101 | 5.02E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene82929 | 0.802343 | 5.87E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene82929 | 0.843987 | 9.99E-59 | -1.69E-46 |
| MS.gene053164 | MS.gene82929 | 0.815219 | 1.03E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene82929 | 0.824244 | 8.97E-54 | -1.69E-46 |
| MS.gene053894 | MS.gene82929 | 0.802078 | 6.65E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene82929 | 0.808827 | 2.56E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene82929 | 0.83839 | 2.96E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene82929 | 0.803561 | 3.29E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene82929 | 0.803879 | 2.82E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene82929 | 0.807008 | 6.24E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene82929 | 0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene055144 | MS.gene82929 | 0.830348 | 3.09E-55 | -1.69E-46 |
| MS.gene055227 | MS.gene82929 | 0.817696 | 2.88E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene82929 | 0.805344 | 1.40E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene82929 | 0.834235 | 3.37E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene82929 | 0.849463 | 3.18E-60 | -1.69E-46 |
| MS.gene055468 | MS.gene82929 | 0.842786 | 2.09E-58 | -1.69E-46 |
| MS.gene055469 | MS.gene82929 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene82929 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene055580 | MS.gene82929 | -0.805033 | 1.62E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene82929 | 0.84212 | 3.14E-58 | -1.69E-46 |
| MS.gene055773 | MS.gene82929 | 0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene82929 | 0.829475 | 5.04E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene82929 | 0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene056553 | MS.gene82929 | 0.828681 | 7.85E-55 | -1.69E-46 |
| MS.gene056908 | MS.gene82929 | 0.810645 | 1.04E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene82929 | 0.824867 | 6.39E-54 | -1.69E-46 |
| MS.gene058339 | MS.gene82929 | 0.843124 | 1.70E-58 | -1.69E-46 |
| MS.gene058360 | MS.gene82929 | 0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene82929 | 0.806173 | 9.35E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene82929 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene82929 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene059842 | MS.gene82929 | 0.816968 | 4.21E-52 | -1.69E-46 |
| MS.gene059937 | MS.gene82929 | 0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene82929 | 0.812956 | 3.27E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene82929 | 0.813501 | 2.48E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene82929 | 0.817077 | 3.97E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82929.t1 | MTR_6g007110 | 97.429 | 700 | 18 | 0 | 1 | 700 | 1 | 700 | 0.0 | 1407 |
| MS.gene82929.t1 | MTR_6g007110 | 97.297 | 629 | 17 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1267 |
| MS.gene82929.t1 | MTR_3g077950 | 62.309 | 589 | 200 | 6 | 128 | 698 | 182 | 766 | 0.0 | 753 |
| MS.gene82929.t1 | MTR_3g077950 | 50.980 | 102 | 49 | 1 | 1 | 102 | 1 | 101 | 2.53e-19 | 93.2 |
| MS.gene82929.t1 | MTR_3g077950 | 62.309 | 589 | 200 | 6 | 128 | 698 | 210 | 794 | 0.0 | 751 |
| MS.gene82929.t1 | MTR_3g077950 | 50.980 | 102 | 49 | 1 | 1 | 102 | 29 | 129 | 2.44e-19 | 93.2 |
| MS.gene82929.t1 | MTR_4g106900 | 54.755 | 694 | 284 | 7 | 1 | 688 | 1 | 670 | 0.0 | 725 |
| MS.gene82929.t1 | MTR_8g099745 | 66.732 | 508 | 168 | 1 | 186 | 693 | 68 | 574 | 0.0 | 722 |
| MS.gene82929.t1 | MTR_8g027385 | 62.062 | 514 | 189 | 3 | 182 | 693 | 49 | 558 | 0.0 | 661 |
| MS.gene82929.t1 | MTR_2g023050 | 88.235 | 102 | 12 | 0 | 598 | 699 | 3 | 104 | 1.81e-54 | 183 |
| MS.gene82929.t1 | MTR_1g070145 | 27.677 | 495 | 325 | 7 | 190 | 669 | 98 | 574 | 1.24e-44 | 169 |
| MS.gene82929.t1 | MTR_6g006830 | 83.673 | 49 | 8 | 0 | 421 | 469 | 19 | 67 | 7.97e-23 | 92.8 |
| MS.gene82929.t1 | MTR_6g006860 | 43.182 | 132 | 24 | 4 | 272 | 396 | 37 | 124 | 2.01e-19 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82929.t1 | AT3G27960 | 65.067 | 667 | 203 | 12 | 30 | 691 | 14 | 655 | 0.0 | 838 |
| MS.gene82929.t1 | AT3G27960 | 65.067 | 667 | 203 | 12 | 30 | 691 | 14 | 655 | 0.0 | 838 |
| MS.gene82929.t1 | AT3G27960 | 64.628 | 605 | 185 | 11 | 30 | 629 | 14 | 594 | 0.0 | 753 |
| MS.gene82929.t1 | AT1G27500 | 57.277 | 639 | 258 | 6 | 55 | 688 | 25 | 653 | 0.0 | 724 |
| MS.gene82929.t1 | AT1G27500 | 57.277 | 639 | 258 | 6 | 55 | 688 | 14 | 642 | 0.0 | 724 |
| MS.gene82929.t1 | AT4G10840 | 62.934 | 518 | 180 | 3 | 186 | 693 | 79 | 594 | 0.0 | 686 |
| MS.gene82929.t1 | AT4G10840 | 62.335 | 454 | 160 | 2 | 186 | 629 | 79 | 531 | 0.0 | 603 |
| MS.gene82929.t1 | AT2G31240 | 27.386 | 482 | 337 | 6 | 190 | 665 | 116 | 590 | 1.65e-41 | 160 |
Find 131 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGAGGCTAGGACTATTT+TGG | 0.164311 | 6.1:-2744795 | MS.gene82929:CDS |
| CCGAACAAGGCTCTCAATTT+TGG | 0.194744 | 6.1:-2745955 | MS.gene82929:CDS |
| GCCACAATTTACTGTAATTT+AGG | 0.207749 | 6.1:-2745850 | MS.gene82929:CDS |
| GAAATTCAAGGGCAGGTCTT+AGG | 0.218691 | 6.1:-2745658 | MS.gene82929:CDS |
| GAATCACTTTGAATACTTCT+TGG | 0.258920 | 6.1:+2746456 | None:intergenic |
| GGTCATCTTGTTGGATATAT+TGG | 0.291335 | 6.1:-2746288 | MS.gene82929:CDS |
| TTACCTTCCCATTGCATCAT+AGG | 0.291421 | 6.1:+2744712 | None:intergenic |
| ATCAAGGATTGATTCAGAAT+TGG | 0.298532 | 6.1:-2746310 | MS.gene82929:CDS |
| TGCTTTGGAGCATTATGTTT+TGG | 0.304479 | 6.1:-2745434 | MS.gene82929:CDS |
| GCTGATCTATACAACAAAAT+AGG | 0.310358 | 6.1:-2745223 | MS.gene82929:CDS |
| GGAGTCATGTATTATATGTT+AGG | 0.311098 | 6.1:-2744971 | MS.gene82929:CDS |
| CACATCACCAATTCCAAACT+TGG | 0.316908 | 6.1:+2745886 | None:intergenic |
| TTCAATGCCTGCAATAACTA+TGG | 0.320521 | 6.1:-2746583 | None:intergenic |
| TGTTGGATGATTCTCTCCTT+TGG | 0.321402 | 6.1:+2745270 | None:intergenic |
| TGTTGGATATATTGGTGATT+TGG | 0.328352 | 6.1:-2746280 | MS.gene82929:CDS |
| AACAAGAGATATGATATCTA+AGG | 0.338308 | 6.1:-2745986 | MS.gene82929:CDS |
| TTTGCAGGGTGTATGCAATT+AGG | 0.340480 | 6.1:-2745742 | MS.gene82929:CDS |
| TGAAGATGGTAAACCAAGTT+TGG | 0.349399 | 6.1:-2745899 | MS.gene82929:CDS |
| CATGCACTAGCTAAGTTTGC+AGG | 0.349500 | 6.1:-2745757 | MS.gene82929:CDS |
| AAATTCAAGGGCAGGTCTTA+GGG | 0.362813 | 6.1:-2745657 | MS.gene82929:CDS |
| CTTGTTATCTTTAACAAGAA+AGG | 0.373530 | 6.1:+2746003 | None:intergenic |
| GGAGTTTATAGCAATCTTGC+AGG | 0.377216 | 6.1:-2744737 | MS.gene82929:CDS |
| AAAGTAGAAGTTTGCATAAG+AGG | 0.383062 | 6.1:-2746137 | MS.gene82929:CDS |
| AATCTCTTCTAGAGAGATTC+CGG | 0.387871 | 6.1:+2745138 | None:intergenic |
| TGCTGGAATTGAAGCACAAA+TGG | 0.389026 | 6.1:-2744993 | MS.gene82929:CDS |
| TCAGAATTGGGTCATCTTGT+TGG | 0.395318 | 6.1:-2746297 | MS.gene82929:CDS |
| CTTCATTTATAGCATACCTT+TGG | 0.397429 | 6.1:+2744831 | None:intergenic |
| TCAAGGATTGATTCAGAATT+GGG | 0.399811 | 6.1:-2746309 | MS.gene82929:CDS |
| CGTTTCTCATCGTCGACATC+AGG | 0.408278 | 6.1:+2744366 | None:intergenic |
| TGGTAAACCAAGTTTGGAAT+TGG | 0.411399 | 6.1:-2745893 | MS.gene82929:CDS |
| AATTCTTCCATAGTTATTGC+AGG | 0.413325 | 6.1:+2746576 | None:intergenic |
| AAGATATACAACAATGTTCC+TGG | 0.414393 | 6.1:-2745031 | MS.gene82929:CDS |
| ATCCATGAATGATATAGAAA+AGG | 0.416117 | 6.1:-2745080 | MS.gene82929:CDS |
| AACAAGAAAGGTCCGAGATC+AGG | 0.418100 | 6.1:+2746015 | None:intergenic |
| CCAAAATTGAGAGCCTTGTT+CGG | 0.420334 | 6.1:+2745955 | None:intergenic |
| CCTAATGTGTCTTGATGATA+AGG | 0.423921 | 6.1:+2744758 | None:intergenic |
| GGTCAACACAGTACTATTGC+TGG | 0.427720 | 6.1:-2745010 | MS.gene82929:CDS |
| AAGCAGGAAGAGCAAGGAAC+AGG | 0.427976 | 6.1:-2744320 | MS.gene82929:CDS |
| GCATAAGAGGCTTGGTTTGA+AGG | 0.433751 | 6.1:-2746064 | MS.gene82929:CDS |
| GCCTGCATCGTTTGAAGAAG+CGG | 0.437353 | 6.1:-2745509 | MS.gene82929:CDS |
| GGACACAAGCAAGTCCCATT+TGG | 0.439623 | 6.1:+2744852 | None:intergenic |
| TACATATTCCAACATTTCAA+TGG | 0.441735 | 6.1:+2744425 | None:intergenic |
| CCTTATCATCAAGACACATT+AGG | 0.443472 | 6.1:-2744758 | MS.gene82929:CDS |
| ATCTCTTCTAGAGAGATTCC+GGG | 0.451271 | 6.1:+2745139 | None:intergenic |
| TCAATCGAACGCTCGAGAAT+CGG | 0.452266 | 6.1:+2745808 | None:intergenic |
| ACTCATATGGCGAAGAATCA+AGG | 0.454260 | 6.1:-2746326 | MS.gene82929:CDS |
| GTTCTGATCAATCACCTTCA+AGG | 0.455701 | 6.1:-2746359 | MS.gene82929:CDS |
| TCCATGAATGATATAGAAAA+GGG | 0.457605 | 6.1:-2745079 | MS.gene82929:CDS |
| AGGTGATACTTATGCAATGA+TGG | 0.459547 | 6.1:-2745722 | MS.gene82929:CDS |
| CTTATTGTGAAAACGCCCTT+CGG | 0.460225 | 6.1:-2745180 | MS.gene82929:CDS |
| TTTGAATTATGTAATGAAGA+TGG | 0.461930 | 6.1:-2745913 | MS.gene82929:CDS |
| AATGAGAAGGGAACTAGAAA+AGG | 0.463055 | 6.1:-2746114 | MS.gene82929:CDS |
| TTCTCAATAGCATCAACATT+CGG | 0.463708 | 6.1:+2746216 | None:intergenic |
| AGGTGATTATGAAAGTGCTT+TGG | 0.465683 | 6.1:-2745449 | MS.gene82929:CDS |
| GGAATTGCATTGAACCAAAT+GGG | 0.469011 | 6.1:-2744866 | MS.gene82929:CDS |
| CTTGATATTCACAAGGGAAA+CGG | 0.471028 | 6.1:-2745535 | MS.gene82929:CDS |
| TGAAAGCTATACACCTCATA+AGG | 0.473275 | 6.1:-2746523 | MS.gene82929:CDS |
| GGTGATGTGTCTTCATGTAT+TGG | 0.479362 | 6.1:-2745872 | MS.gene82929:CDS |
| TGGAATTGCATTGAACCAAA+TGG | 0.482345 | 6.1:-2744867 | MS.gene82929:CDS |
| TCTCTAGAAGAGATTGCAAA+TGG | 0.485821 | 6.1:-2745130 | MS.gene82929:CDS |
| GCCGAGTTGTTAAAAGAAGC+AGG | 0.488102 | 6.1:-2744336 | MS.gene82929:CDS |
| AAGGGAACTAGAAAAGGAAA+TGG | 0.489596 | 6.1:-2746108 | MS.gene82929:CDS |
| GCAGTAAAGTTATCCTTATG+AGG | 0.489807 | 6.1:+2746510 | None:intergenic |
| AGCTAAGAAGCTGTGTCAAA+TGG | 0.495654 | 6.1:-2745560 | MS.gene82929:CDS |
| ATATGATGAGGAAGCATAAG+AGG | 0.497481 | 6.1:-2746077 | MS.gene82929:CDS |
| CAACAAAATAGGCAAGTTCA+AGG | 0.497660 | 6.1:-2745212 | MS.gene82929:CDS |
| CGGTGAAGAATCGTCAAAGT+TGG | 0.498330 | 6.1:-2746166 | MS.gene82929:CDS |
| AGGCGATGCTTATTTGTCGT+TGG | 0.499558 | 6.1:-2745350 | MS.gene82929:CDS |
| ACAGCAGGACTTGAAATTCA+AGG | 0.502831 | 6.1:-2745670 | MS.gene82929:CDS |
| GCTTCGGTTGATTGTAGCAT+AGG | 0.507105 | 6.1:-2745370 | MS.gene82929:CDS |
| CTTGGACTTAGTGTACTCCT+TGG | 0.507878 | 6.1:+2746474 | None:intergenic |
| AGCGGCTGATCGGAGATTGA+TGG | 0.508307 | 6.1:-2745491 | MS.gene82929:CDS |
| GGACTAATCTGTGACTCAAA+AGG | 0.508573 | 6.1:-2745469 | MS.gene82929:CDS |
| GAAATGTTGGAATATGTAGT+TGG | 0.509887 | 6.1:-2744420 | MS.gene82929:CDS |
| ACTTCTCATTTCATAAACAT+TGG | 0.511524 | 6.1:+2746380 | None:intergenic |
| CGGATTTGTTCGAAGAGGCT+AGG | 0.512806 | 6.1:-2744805 | MS.gene82929:CDS |
| ATGAGGAAGCATAAGAGGCT+TGG | 0.515392 | 6.1:-2746072 | MS.gene82929:CDS |
| GGTTATGGCGGAAAACCGTC+AGG | 0.515507 | 6.1:-2745404 | MS.gene82929:CDS |
| GCAGGAACCTATGATGCAAT+GGG | 0.518109 | 6.1:-2744719 | MS.gene82929:CDS |
| GGGGAAACTGATCCTCGATT+CGG | 0.522063 | 6.1:-2745637 | MS.gene82929:CDS |
| GCGGCTGATCGGAGATTGAT+GGG | 0.524259 | 6.1:-2745490 | MS.gene82929:CDS |
| TGCAGGAACCTATGATGCAA+TGG | 0.524517 | 6.1:-2744720 | MS.gene82929:CDS |
| AGGACTTGAAATTCAAGGGC+AGG | 0.524841 | 6.1:-2745665 | MS.gene82929:CDS |
| GGATGATGCCATTGAAATGT+TGG | 0.531705 | 6.1:-2744433 | MS.gene82929:CDS |
| GCCGCTTCTTCAAACGATGC+AGG | 0.539483 | 6.1:+2745508 | None:intergenic |
| TCAGGAACTAGACGTTGCTT+CGG | 0.541301 | 6.1:-2745386 | MS.gene82929:CDS |
| GCTGGAATTGAAGCACAAAT+GGG | 0.544451 | 6.1:-2744992 | MS.gene82929:CDS |
| CTCGATTCGGTGAGACATGT+CGG | 0.555108 | 6.1:-2745624 | MS.gene82929:CDS |
| TGTCACAACAGAAAATAAAG+AGG | 0.555241 | 6.1:-2746241 | MS.gene82929:CDS |
| GAGTCATGTATTATATGTTA+GGG | 0.556961 | 6.1:-2744970 | MS.gene82929:CDS |
| CAGCAGGACTTGAAATTCAA+GGG | 0.565491 | 6.1:-2745669 | MS.gene82929:CDS |
| CGTTTGAAGAAGCGGCTGAT+CGG | 0.567330 | 6.1:-2745501 | MS.gene82929:CDS |
| TCAATTGATTTAGCCATCGA+CGG | 0.567860 | 6.1:-2746435 | MS.gene82929:CDS |
| AAGAGGCTTGGTTTGAAGGA+CGG | 0.569541 | 6.1:-2746060 | MS.gene82929:CDS |
| TTCTGATCAATCACCTTCAA+GGG | 0.570336 | 6.1:-2746358 | MS.gene82929:CDS |
| TTTGCATAAGAGGAATGAGA+AGG | 0.571407 | 6.1:-2746127 | MS.gene82929:CDS |
| GTTTCTTCAAGCACAAGGAT+CGG | 0.574004 | 6.1:-2746186 | MS.gene82929:CDS |
| GGTGATACTTATGCAATGAT+GGG | 0.574573 | 6.1:-2745721 | MS.gene82929:CDS |
| TCCTAAATTACAGTAAATTG+TGG | 0.579760 | 6.1:+2745849 | None:intergenic |
| GAGTTAGATAATCCTGATCT+CGG | 0.583047 | 6.1:-2746027 | MS.gene82929:CDS |
| ACAAGAGATATGATATCTAA+GGG | 0.596104 | 6.1:-2745985 | MS.gene82929:CDS |
| TGGGACTTGCTTGTGTCCAA+AGG | 0.597967 | 6.1:-2744847 | MS.gene82929:CDS |
| CGAACGCTCGAGAATCGGTA+TGG | 0.598027 | 6.1:+2745813 | None:intergenic |
| TAAAAGAAGCAGGAAGAGCA+AGG | 0.602086 | 6.1:-2744326 | MS.gene82929:CDS |
| GCAATAGTACTGTGTTGACC+AGG | 0.603485 | 6.1:+2745013 | None:intergenic |
| GTCGCAAAATTTCGTGCTAG+CGG | 0.610520 | 6.1:-2744911 | MS.gene82929:CDS |
| AGTATCTACAACACCGTCGA+TGG | 0.614317 | 6.1:+2746422 | None:intergenic |
| AATTCAAGGGCAGGTCTTAG+GGG | 0.616046 | 6.1:-2745656 | MS.gene82929:CDS |
| TTTGGCAAGCGTGGTTATGG+CGG | 0.616408 | 6.1:-2745416 | MS.gene82929:CDS |
| GGAATGAGAGAAGAGAAGCT+AGG | 0.616908 | 6.1:-2744399 | MS.gene82929:CDS |
| ATGCACTAGCTAAGTTTGCA+GGG | 0.620124 | 6.1:-2745756 | MS.gene82929:CDS |
| TCTTGACCATGCTCTAACAC+AGG | 0.621585 | 6.1:+2745781 | None:intergenic |
| GTATGCTATAAATGAAGCTG+CGG | 0.621746 | 6.1:-2744825 | MS.gene82929:CDS |
| TTGCATAAGAGGAATGAGAA+GGG | 0.622583 | 6.1:-2746126 | MS.gene82929:CDS |
| TCTCAAATTATAAAAGACAA+TGG | 0.623016 | 6.1:-2744258 | MS.gene82929:CDS |
| GATGTTCCTGTGTTAGAGCA+TGG | 0.625382 | 6.1:-2745787 | MS.gene82929:CDS |
| TTATTGTTTCTTCAAGCACA+AGG | 0.635722 | 6.1:-2746191 | MS.gene82929:CDS |
| CGACGATGAGAAACGTAGGT+TGG | 0.637957 | 6.1:-2744358 | MS.gene82929:CDS |
| CGACATGTCTCACCGAATCG+AGG | 0.638572 | 6.1:+2745625 | None:intergenic |
| AATGGCTCTTGATATTCACA+AGG | 0.649667 | 6.1:-2745542 | MS.gene82929:CDS |
| TTTCTTCCCGAAAATCCGAA+GGG | 0.655728 | 6.1:+2745165 | None:intergenic |
| AGCTGCGGATTTGTTCGAAG+AGG | 0.656437 | 6.1:-2744810 | MS.gene82929:CDS |
| GAACCTATGATGCAATGGGA+AGG | 0.656596 | 6.1:-2744715 | MS.gene82929:intron |
| TAAGGGTGAGAATCCGAACA+AGG | 0.657093 | 6.1:-2745968 | MS.gene82929:CDS |
| AAGCAACGTCTAGTTCCTGA+CGG | 0.661536 | 6.1:+2745389 | None:intergenic |
| CAGTGCTTGAACATGTGCCT+CGG | 0.663577 | 6.1:+2745594 | None:intergenic |
| GACATGTCGGTATGTAGCCG+AGG | 0.664489 | 6.1:-2745611 | MS.gene82929:CDS |
| ATGGCTCTTGATATTCACAA+GGG | 0.677786 | 6.1:-2745541 | MS.gene82929:CDS |
| CTGCTCAACAAGCATCACCA+AGG | 0.705437 | 6.1:-2746491 | MS.gene82929:CDS |
| ATGTCGACGATGAGAAACGT+AGG | 0.718474 | 6.1:-2744362 | MS.gene82929:CDS |
| TAATTTAGGACAGTACAGTG+AGG | 0.792554 | 6.1:-2745836 | MS.gene82929:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATAAAACAATGCAT+TGG | + | chr6.1:2746243-2746262 | None:intergenic | 15.0% |
| !! | ATAAAATGTAAGGAGATTTA+AGG | + | chr6.1:2746148-2746167 | None:intergenic | 20.0% |
| !! | TAAAATGTAAGGAGATTTAA+GGG | + | chr6.1:2746147-2746166 | None:intergenic | 20.0% |
| !! | TCTCAAATTATAAAAGACAA+TGG | - | chr6.1:2746563-2746582 | MS.gene82929:CDS | 20.0% |
| !! | TTTGAATTATGTAATGAAGA+TGG | - | chr6.1:2744908-2744927 | MS.gene82929:CDS | 20.0% |
| !!! | AATTATAATGATTTTCAGAG+TGG | - | chr6.1:2746367-2746386 | MS.gene82929:CDS | 20.0% |
| !!! | TTGTAATATGTTATTTGACA+TGG | + | chr6.1:2746267-2746286 | None:intergenic | 20.0% |
| ! | AACAAGAGATATGATATCTA+AGG | - | chr6.1:2744835-2744854 | MS.gene82929:CDS | 25.0% |
| ! | ACAAGAGATATGATATCTAA+GGG | - | chr6.1:2744836-2744855 | MS.gene82929:CDS | 25.0% |
| ! | ACTTCTCATTTCATAAACAT+TGG | + | chr6.1:2744444-2744463 | None:intergenic | 25.0% |
| ! | ATCCATGAATGATATAGAAA+AGG | - | chr6.1:2745741-2745760 | MS.gene82929:CDS | 25.0% |
| ! | GAGTCATGTATTATATGTTA+GGG | - | chr6.1:2745851-2745870 | MS.gene82929:CDS | 25.0% |
| ! | GATCAGAACAATAAAATGTA+AGG | + | chr6.1:2746158-2746177 | None:intergenic | 25.0% |
| ! | TACATATTCCAACATTTCAA+TGG | + | chr6.1:2746399-2746418 | None:intergenic | 25.0% |
| ! | TCCATGAATGATATAGAAAA+GGG | - | chr6.1:2745742-2745761 | MS.gene82929:CDS | 25.0% |
| ! | TCCTAAATTACAGTAAATTG+TGG | + | chr6.1:2744975-2744994 | None:intergenic | 25.0% |
| !! | ATGGTTTTTACAATATGATG+AGG | - | chr6.1:2744732-2744751 | MS.gene82929:CDS | 25.0% |
| !! | CTTGTTATCTTTAACAAGAA+AGG | + | chr6.1:2744821-2744840 | None:intergenic | 25.0% |
| !! | GTCTTTTATAATTTGAGAGT+TGG | + | chr6.1:2746561-2746580 | None:intergenic | 25.0% |
| !!! | ACTATTTTGGAAAAAGAGTA+TGG | - | chr6.1:2746039-2746058 | MS.gene82929:CDS | 25.0% |
| AAAGTAGAAGTTTGCATAAG+AGG | - | chr6.1:2744684-2744703 | MS.gene82929:intron | 30.0% | |
| AAGATATACAACAATGTTCC+TGG | - | chr6.1:2745790-2745809 | MS.gene82929:CDS | 30.0% | |
| AATTCTTCCATAGTTATTGC+AGG | + | chr6.1:2744248-2744267 | None:intergenic | 30.0% | |
| ATGTGCAGTTTGGATTATAT+CGG | - | chr6.1:2746202-2746221 | MS.gene82929:CDS | 30.0% | |
| CAGGAAATCAAAAAGATCAT+TGG | - | chr6.1:2746520-2746539 | MS.gene82929:CDS | 30.0% | |
| CTTCATTTATAGCATACCTT+TGG | + | chr6.1:2745993-2746012 | None:intergenic | 30.0% | |
| GAAATGTTGGAATATGTAGT+TGG | - | chr6.1:2746401-2746420 | MS.gene82929:CDS | 30.0% | |
| GAATCACTTTGAATACTTCT+TGG | + | chr6.1:2744368-2744387 | None:intergenic | 30.0% | |
| GCCACAATTTACTGTAATTT+AGG | - | chr6.1:2744971-2744990 | MS.gene82929:CDS | 30.0% | |
| GCTGATCTATACAACAAAAT+AGG | - | chr6.1:2745598-2745617 | MS.gene82929:CDS | 30.0% | |
| GGAGTCATGTATTATATGTT+AGG | - | chr6.1:2745850-2745869 | MS.gene82929:CDS | 30.0% | |
| TGTCACAACAGAAAATAAAG+AGG | - | chr6.1:2744580-2744599 | MS.gene82929:intron | 30.0% | |
| TTCTCAATAGCATCAACATT+CGG | + | chr6.1:2744608-2744627 | None:intergenic | 30.0% | |
| ! | AACAATGCATTGGTAAAACA+CGG | + | chr6.1:2746233-2746252 | None:intergenic | 30.0% |
| ! | ACCCTTTTCTATATCATTCA+TGG | + | chr6.1:2745746-2745765 | None:intergenic | 30.0% |
| ! | ACTGTTTTCAAATCAACCAA+AGG | - | chr6.1:2745535-2745554 | MS.gene82929:CDS | 30.0% |
| ! | ATCAAGGATTGATTCAGAAT+TGG | - | chr6.1:2744511-2744530 | MS.gene82929:intron | 30.0% |
| ! | GTCGAGTACTAGAATTTTTA+AGG | - | chr6.1:2746320-2746339 | MS.gene82929:CDS | 30.0% |
| ! | TCAAGGATTGATTCAGAATT+GGG | - | chr6.1:2744512-2744531 | MS.gene82929:intron | 30.0% |
| ! | TGTTGGATATATTGGTGATT+TGG | - | chr6.1:2744541-2744560 | MS.gene82929:intron | 30.0% |
| ! | TTATTGTTTCTTCAAGCACA+AGG | - | chr6.1:2744630-2744649 | MS.gene82929:intron | 30.0% |
| AAGGGAACTAGAAAAGGAAA+TGG | - | chr6.1:2744713-2744732 | MS.gene82929:intron | 35.0% | |
| AATGAGAAGGGAACTAGAAA+AGG | - | chr6.1:2744707-2744726 | MS.gene82929:intron | 35.0% | |
| AATGGCTCTTGATATTCACA+AGG | - | chr6.1:2745279-2745298 | MS.gene82929:CDS | 35.0% | |
| ACAAAAACAGAAGCAACTGT+TGG | + | chr6.1:2745571-2745590 | None:intergenic | 35.0% | |
| AGGTGATACTTATGCAATGA+TGG | - | chr6.1:2745099-2745118 | MS.gene82929:CDS | 35.0% | |
| ATGGCTCTTGATATTCACAA+GGG | - | chr6.1:2745280-2745299 | MS.gene82929:CDS | 35.0% | |
| CAACAAAATAGGCAAGTTCA+AGG | - | chr6.1:2745609-2745628 | MS.gene82929:CDS | 35.0% | |
| CCTTATCATCAAGACACATT+AGG | - | chr6.1:2746063-2746082 | MS.gene82929:CDS | 35.0% | |
| CTTGATATTCACAAGGGAAA+CGG | - | chr6.1:2745286-2745305 | MS.gene82929:CDS | 35.0% | |
| GAGTTAGATAATCCTGATCT+CGG | - | chr6.1:2744794-2744813 | MS.gene82929:CDS | 35.0% | |
| GCAGTAAAGTTATCCTTATG+AGG | + | chr6.1:2744314-2744333 | None:intergenic | 35.0% | |
| GGAATTGCATTGAACCAAAT+GGG | - | chr6.1:2745955-2745974 | MS.gene82929:CDS | 35.0% | |
| GGTCATCTTGTTGGATATAT+TGG | - | chr6.1:2744533-2744552 | MS.gene82929:intron | 35.0% | |
| GGTGATACTTATGCAATGAT+GGG | - | chr6.1:2745100-2745119 | MS.gene82929:CDS | 35.0% | |
| GTATGCTATAAATGAAGCTG+CGG | - | chr6.1:2745996-2746015 | MS.gene82929:CDS | 35.0% | |
| TGAAAGCTATACACCTCATA+AGG | - | chr6.1:2744298-2744317 | MS.gene82929:CDS | 35.0% | |
| TGAAGATGGTAAACCAAGTT+TGG | - | chr6.1:2744922-2744941 | MS.gene82929:CDS | 35.0% | |
| TGGAATTGCATTGAACCAAA+TGG | - | chr6.1:2745954-2745973 | MS.gene82929:CDS | 35.0% | |
| TTCTGATCAATCACCTTCAA+GGG | - | chr6.1:2744463-2744482 | MS.gene82929:intron | 35.0% | |
| TTGCATAAGAGGAATGAGAA+GGG | - | chr6.1:2744695-2744714 | MS.gene82929:intron | 35.0% | |
| TTTGCATAAGAGGAATGAGA+AGG | - | chr6.1:2744694-2744713 | MS.gene82929:intron | 35.0% | |
| ! | AATCTCTTCTAGAGAGATTC+CGG | + | chr6.1:2745686-2745705 | None:intergenic | 35.0% |
| ! | ATATGATGAGGAAGCATAAG+AGG | - | chr6.1:2744744-2744763 | MS.gene82929:CDS | 35.0% |
| ! | CCTAATGTGTCTTGATGATA+AGG | + | chr6.1:2746066-2746085 | None:intergenic | 35.0% |
| ! | TAATTTAGGACAGTACAGTG+AGG | - | chr6.1:2744985-2745004 | MS.gene82929:CDS | 35.0% |
| ! | TCAATTGATTTAGCCATCGA+CGG | - | chr6.1:2744386-2744405 | MS.gene82929:CDS | 35.0% |
| ! | TCCTGCTTCTTTTAACAACT+CGG | + | chr6.1:2746489-2746508 | None:intergenic | 35.0% |
| ! | TCTCTACTGTTTTATACAGC+AGG | - | chr6.1:2745136-2745155 | MS.gene82929:CDS | 35.0% |
| ! | TCTCTAGAAGAGATTGCAAA+TGG | - | chr6.1:2745691-2745710 | MS.gene82929:CDS | 35.0% |
| ! | TGGTAAACCAAGTTTGGAAT+TGG | - | chr6.1:2744928-2744947 | MS.gene82929:CDS | 35.0% |
| !! | AGGTGATTATGAAAGTGCTT+TGG | - | chr6.1:2745372-2745391 | MS.gene82929:CDS | 35.0% |
| !! | ATTTTCGGGAAGAAAAAACC+CGG | - | chr6.1:2745664-2745683 | MS.gene82929:CDS | 35.0% |
| !! | GAGAAAAAATCGGCTTTGTT+TGG | - | chr6.1:2745934-2745953 | MS.gene82929:CDS | 35.0% |
| !!! | AGGGCTAGTTTTTACTCATA+TGG | - | chr6.1:2744482-2744501 | MS.gene82929:intron | 35.0% |
| !!! | TGCTTTGGAGCATTATGTTT+TGG | - | chr6.1:2745387-2745406 | MS.gene82929:CDS | 35.0% |
| AAATTCAAGGGCAGGTCTTA+GGG | - | chr6.1:2745164-2745183 | MS.gene82929:CDS | 40.0% | |
| ACAGCAGGACTTGAAATTCA+AGG | - | chr6.1:2745151-2745170 | MS.gene82929:CDS | 40.0% | |
| ACTCATATGGCGAAGAATCA+AGG | - | chr6.1:2744495-2744514 | MS.gene82929:intron | 40.0% | |
| AGCTAAGAAGCTGTGTCAAA+TGG | - | chr6.1:2745261-2745280 | MS.gene82929:CDS | 40.0% | |
| ATCTCGACATAGTACTCTCT+CGG | - | chr6.1:2746175-2746194 | MS.gene82929:CDS | 40.0% | |
| ATGCACTAGCTAAGTTTGCA+GGG | - | chr6.1:2745065-2745084 | MS.gene82929:CDS | 40.0% | |
| CACATCACCAATTCCAAACT+TGG | + | chr6.1:2744938-2744957 | None:intergenic | 40.0% | |
| CAGCAGGACTTGAAATTCAA+GGG | - | chr6.1:2745152-2745171 | MS.gene82929:CDS | 40.0% | |
| CTTATTGTGAAAACGCCCTT+CGG | - | chr6.1:2745641-2745660 | MS.gene82929:CDS | 40.0% | |
| GAGTAAAAACTAGCCCTTGA+AGG | + | chr6.1:2744479-2744498 | None:intergenic | 40.0% | |
| GCTGGAATTGAAGCACAAAT+GGG | - | chr6.1:2745829-2745848 | MS.gene82929:CDS | 40.0% | |
| GGACTAATCTGTGACTCAAA+AGG | - | chr6.1:2745352-2745371 | MS.gene82929:CDS | 40.0% | |
| GGAGTTTATAGCAATCTTGC+AGG | - | chr6.1:2746084-2746103 | MS.gene82929:CDS | 40.0% | |
| GGATGATGCCATTGAAATGT+TGG | - | chr6.1:2746388-2746407 | MS.gene82929:CDS | 40.0% | |
| GGTGATGTGTCTTCATGTAT+TGG | - | chr6.1:2744949-2744968 | MS.gene82929:CDS | 40.0% | |
| GTTCTGATCAATCACCTTCA+AGG | - | chr6.1:2744462-2744481 | MS.gene82929:intron | 40.0% | |
| GTTTCTTCAAGCACAAGGAT+CGG | - | chr6.1:2744635-2744654 | MS.gene82929:intron | 40.0% | |
| TAAAAGAAGCAGGAAGAGCA+AGG | - | chr6.1:2746495-2746514 | MS.gene82929:CDS | 40.0% | |
| TCAGAATTGGGTCATCTTGT+TGG | - | chr6.1:2744524-2744543 | MS.gene82929:intron | 40.0% | |
| TGCTGGAATTGAAGCACAAA+TGG | - | chr6.1:2745828-2745847 | MS.gene82929:CDS | 40.0% | |
| TGTTGGATGATTCTCTCCTT+TGG | + | chr6.1:2745554-2745573 | None:intergenic | 40.0% | |
| TTACCTTCCCATTGCATCAT+AGG | + | chr6.1:2746112-2746131 | None:intergenic | 40.0% | |
| TTTCTTCCCGAAAATCCGAA+GGG | + | chr6.1:2745659-2745678 | None:intergenic | 40.0% | |
| TTTGCAGGGTGTATGCAATT+AGG | - | chr6.1:2745079-2745098 | MS.gene82929:CDS | 40.0% | |
| ! | ATCTCTTCTAGAGAGATTCC+GGG | + | chr6.1:2745685-2745704 | None:intergenic | 40.0% |
| ! | TTTTCTTCCCGAAAATCCGA+AGG | + | chr6.1:2745660-2745679 | None:intergenic | 40.0% |
| !! | CCAAAATTGAGAGCCTTGTT+CGG | + | chr6.1:2744869-2744888 | None:intergenic | 40.0% |
| AACAAGAAAGGTCCGAGATC+AGG | + | chr6.1:2744809-2744828 | None:intergenic | 45.0% | |
| AATTCAAGGGCAGGTCTTAG+GGG | - | chr6.1:2745165-2745184 | MS.gene82929:CDS | 45.0% | |
| AGGACTTGAAATTCAAGGGC+AGG | - | chr6.1:2745156-2745175 | MS.gene82929:CDS | 45.0% | |
| AGGCGATGCTTATTTGTCGT+TGG | - | chr6.1:2745471-2745490 | MS.gene82929:CDS | 45.0% | |
| AGTATCTACAACACCGTCGA+TGG | + | chr6.1:2744402-2744421 | None:intergenic | 45.0% | |
| ATGTCGACGATGAGAAACGT+AGG | - | chr6.1:2746459-2746478 | MS.gene82929:CDS | 45.0% | |
| CATGCACTAGCTAAGTTTGC+AGG | - | chr6.1:2745064-2745083 | MS.gene82929:CDS | 45.0% | |
| CGGTGAAGAATCGTCAAAGT+TGG | - | chr6.1:2744655-2744674 | MS.gene82929:intron | 45.0% | |
| CTTGGACTTAGTGTACTCCT+TGG | + | chr6.1:2744350-2744369 | None:intergenic | 45.0% | |
| GAAATTCAAGGGCAGGTCTT+AGG | - | chr6.1:2745163-2745182 | MS.gene82929:CDS | 45.0% | |
| GAACCTATGATGCAATGGGA+AGG | - | chr6.1:2746106-2746125 | MS.gene82929:CDS | 45.0% | |
| GATGTTCCTGTGTTAGAGCA+TGG | - | chr6.1:2745034-2745053 | MS.gene82929:CDS | 45.0% | |
| GCAGGAACCTATGATGCAAT+GGG | - | chr6.1:2746102-2746121 | MS.gene82929:CDS | 45.0% | |
| GCCGAGTTGTTAAAAGAAGC+AGG | - | chr6.1:2746485-2746504 | MS.gene82929:CDS | 45.0% | |
| GCTTCGGTTGATTGTAGCAT+AGG | - | chr6.1:2745451-2745470 | MS.gene82929:CDS | 45.0% | |
| GGAATGAGAGAAGAGAAGCT+AGG | - | chr6.1:2746422-2746441 | MS.gene82929:CDS | 45.0% | |
| GGTCAACACAGTACTATTGC+TGG | - | chr6.1:2745811-2745830 | MS.gene82929:CDS | 45.0% | |
| GTCGCAAAATTTCGTGCTAG+CGG | - | chr6.1:2745910-2745929 | MS.gene82929:CDS | 45.0% | |
| TAAGGGTGAGAATCCGAACA+AGG | - | chr6.1:2744853-2744872 | MS.gene82929:CDS | 45.0% | |
| TCAATCGAACGCTCGAGAAT+CGG | + | chr6.1:2745016-2745035 | None:intergenic | 45.0% | |
| TCAGGAACTAGACGTTGCTT+CGG | - | chr6.1:2745435-2745454 | MS.gene82929:CDS | 45.0% | |
| TCTTGACCATGCTCTAACAC+AGG | + | chr6.1:2745043-2745062 | None:intergenic | 45.0% | |
| TGCAGGAACCTATGATGCAA+TGG | - | chr6.1:2746101-2746120 | MS.gene82929:CDS | 45.0% | |
| TGCTAGCGGCGAGAAAAAAT+CGG | - | chr6.1:2745924-2745943 | MS.gene82929:CDS | 45.0% | |
| ! | AAAACGCCCTTCGGATTTTC+GGG | - | chr6.1:2745650-2745669 | MS.gene82929:CDS | 45.0% |
| ! | AAGAGGCTTGGTTTGAAGGA+CGG | - | chr6.1:2744761-2744780 | MS.gene82929:CDS | 45.0% |
| ! | AAGCAACGTCTAGTTCCTGA+CGG | + | chr6.1:2745435-2745454 | None:intergenic | 45.0% |
| ! | ATGAGGAAGCATAAGAGGCT+TGG | - | chr6.1:2744749-2744768 | MS.gene82929:CDS | 45.0% |
| ! | CCGAACAAGGCTCTCAATTT+TGG | - | chr6.1:2744866-2744885 | MS.gene82929:CDS | 45.0% |
| ! | CGAAGAGGCTAGGACTATTT+TGG | - | chr6.1:2746026-2746045 | MS.gene82929:CDS | 45.0% |
| ! | GAAAACGCCCTTCGGATTTT+CGG | - | chr6.1:2745649-2745668 | MS.gene82929:CDS | 45.0% |
| ! | GCAATAGTACTGTGTTGACC+AGG | + | chr6.1:2745811-2745830 | None:intergenic | 45.0% |
| ! | GCATAAGAGGCTTGGTTTGA+AGG | - | chr6.1:2744757-2744776 | MS.gene82929:CDS | 45.0% |
| !!! | GCATTATGTTTTGGCAAGCG+TGG | - | chr6.1:2745396-2745415 | MS.gene82929:CDS | 45.0% |
| !!! | TGTTTTGGCAAGCGTGGTTA+TGG | - | chr6.1:2745402-2745421 | MS.gene82929:CDS | 45.0% |
| AAGCAGGAAGAGCAAGGAAC+AGG | - | chr6.1:2746501-2746520 | MS.gene82929:CDS | 50.0% | |
| CAGTGCTTGAACATGTGCCT+CGG | + | chr6.1:2745230-2745249 | None:intergenic | 50.0% | |
| CGACGATGAGAAACGTAGGT+TGG | - | chr6.1:2746463-2746482 | MS.gene82929:CDS | 50.0% | |
| CGTTTCTCATCGTCGACATC+AGG | + | chr6.1:2746458-2746477 | None:intergenic | 50.0% | |
| CGTTTGAAGAAGCGGCTGAT+CGG | - | chr6.1:2745320-2745339 | MS.gene82929:CDS | 50.0% | |
| CTGCTCAACAAGCATCACCA+AGG | - | chr6.1:2744330-2744349 | MS.gene82929:CDS | 50.0% | |
| GCCTGCATCGTTTGAAGAAG+CGG | - | chr6.1:2745312-2745331 | MS.gene82929:CDS | 50.0% | |
| GGACACAAGCAAGTCCCATT+TGG | + | chr6.1:2745972-2745991 | None:intergenic | 50.0% | |
| GGGGAAACTGATCCTCGATT+CGG | - | chr6.1:2745184-2745203 | MS.gene82929:CDS | 50.0% | |
| TCTCGGTCTCATGTGCAGTT+TGG | - | chr6.1:2746192-2746211 | MS.gene82929:CDS | 50.0% | |
| TTTGGCAAGCGTGGTTATGG+CGG | - | chr6.1:2745405-2745424 | MS.gene82929:CDS | 50.0% | |
| ! | AGCTGCGGATTTGTTCGAAG+AGG | - | chr6.1:2746011-2746030 | MS.gene82929:CDS | 50.0% |
| ! | CGGATTTGTTCGAAGAGGCT+AGG | - | chr6.1:2746016-2746035 | MS.gene82929:CDS | 50.0% |
| ! | TGGGACTTGCTTGTGTCCAA+AGG | - | chr6.1:2745974-2745993 | MS.gene82929:CDS | 50.0% |
| !! | CTCGATTCGGTGAGACATGT+CGG | - | chr6.1:2745197-2745216 | MS.gene82929:CDS | 50.0% |
| AGCGGCTGATCGGAGATTGA+TGG | - | chr6.1:2745330-2745349 | MS.gene82929:CDS | 55.0% | |
| CGAACGCTCGAGAATCGGTA+TGG | + | chr6.1:2745011-2745030 | None:intergenic | 55.0% | |
| CGACATGTCTCACCGAATCG+AGG | + | chr6.1:2745199-2745218 | None:intergenic | 55.0% | |
| GACATGTCGGTATGTAGCCG+AGG | - | chr6.1:2745210-2745229 | MS.gene82929:CDS | 55.0% | |
| GCCGCTTCTTCAAACGATGC+AGG | + | chr6.1:2745316-2745335 | None:intergenic | 55.0% | |
| GCGGCTGATCGGAGATTGAT+GGG | - | chr6.1:2745331-2745350 | MS.gene82929:CDS | 55.0% | |
| ! | GGTTATGGCGGAAAACCGTC+AGG | - | chr6.1:2745417-2745436 | MS.gene82929:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 2744242 | 2746601 | 2744242 | ID=MS.gene82929 |
| chr6.1 | mRNA | 2744242 | 2746601 | 2744242 | ID=MS.gene82929.t1;Parent=MS.gene82929 |
| chr6.1 | exon | 2744716 | 2746601 | 2744716 | ID=MS.gene82929.t1.exon1;Parent=MS.gene82929.t1 |
| chr6.1 | CDS | 2744716 | 2746601 | 2744716 | ID=cds.MS.gene82929.t1;Parent=MS.gene82929.t1 |
| chr6.1 | exon | 2744242 | 2744458 | 2744242 | ID=MS.gene82929.t1.exon2;Parent=MS.gene82929.t1 |
| chr6.1 | CDS | 2744242 | 2744458 | 2744242 | ID=cds.MS.gene82929.t1;Parent=MS.gene82929.t1 |
| Gene Sequence |
| Protein sequence |
