Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89109.t1 | AES68023.2 | 98.1 | 157 | 3 | 0 | 1 | 157 | 1 | 157 | 5.70E-80 | 307.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89109.t1 | G7II42 | 98.1 | 157 | 3 | 0 | 1 | 157 | 1 | 157 | 4.1e-80 | 307.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene89109 | 0.833926 | 4.03E-56 | -1.69E-46 |
| MS.gene050020 | MS.gene89109 | 0.83801 | 3.71E-57 | -1.69E-46 |
| MS.gene050303 | MS.gene89109 | 0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene89109 | 0.805424 | 1.34E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene89109 | 0.810776 | 9.74E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene89109 | 0.842315 | 2.79E-58 | -1.69E-46 |
| MS.gene051265 | MS.gene89109 | 0.812312 | 4.52E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene89109 | 0.823697 | 1.20E-53 | -1.69E-46 |
| MS.gene05288 | MS.gene89109 | 0.845043 | 5.19E-59 | -1.69E-46 |
| MS.gene05289 | MS.gene89109 | 0.834884 | 2.32E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene89109 | 0.82313 | 1.63E-53 | -1.69E-46 |
| MS.gene053074 | MS.gene89109 | 0.826583 | 2.50E-54 | -1.69E-46 |
| MS.gene054713 | MS.gene89109 | 0.846895 | 1.63E-59 | -1.69E-46 |
| MS.gene055608 | MS.gene89109 | 0.866628 | 2.48E-65 | -1.69E-46 |
| MS.gene055818 | MS.gene89109 | 0.803127 | 4.04E-49 | -1.69E-46 |
| MS.gene056908 | MS.gene89109 | 0.801046 | 1.08E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene89109 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene89109 | 0.822862 | 1.89E-53 | -1.69E-46 |
| MS.gene058042 | MS.gene89109 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene89109 | 0.801737 | 7.82E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene89109 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene059006 | MS.gene89109 | 0.81175 | 5.99E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene89109 | 0.811076 | 8.39E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene89109 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene89109 | 0.806331 | 8.66E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene89109 | 0.830878 | 2.29E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89109.t1 | MTR_2g102080 | 98.089 | 157 | 3 | 0 | 1 | 157 | 1 | 157 | 5.46e-111 | 320 |
| MS.gene89109.t1 | MTR_2g102090 | 86.916 | 107 | 11 | 1 | 156 | 262 | 10 | 113 | 2.90e-55 | 180 |
| MS.gene89109.t1 | MTR_4g012450 | 39.744 | 156 | 91 | 2 | 1 | 154 | 34 | 188 | 1.84e-35 | 127 |
| MS.gene89109.t1 | MTR_6g086455 | 35.260 | 173 | 102 | 3 | 1 | 167 | 78 | 246 | 3.78e-31 | 117 |
| MS.gene89109.t1 | MTR_4g076590 | 79.167 | 72 | 15 | 0 | 185 | 256 | 20 | 91 | 2.41e-29 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89109.t1 | AT1G52330 | 54.902 | 153 | 69 | 0 | 1 | 153 | 59 | 211 | 1.63e-61 | 194 |
| MS.gene89109.t1 | AT1G52330 | 52.985 | 134 | 63 | 0 | 1 | 134 | 59 | 192 | 3.31e-49 | 163 |
| MS.gene89109.t1 | AT4G13270 | 43.791 | 153 | 86 | 0 | 1 | 153 | 60 | 212 | 1.43e-42 | 146 |
Find 82 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCAGCTCTTCAATTT+TGG | 0.128265 | 2.4:+2820709 | None:intergenic |
| AAGAAAATGATTTACCTTAA+TGG | 0.212531 | 2.4:+2826252 | None:intergenic |
| AGAAAATGATTTACCTTAAT+GGG | 0.264332 | 2.4:+2826253 | None:intergenic |
| TAAACTATCATGTGCGGTTT+TGG | 0.284881 | 2.4:-2826108 | MS.gene89109:CDS |
| TAGTCAAGTTAGGGGCAAAA+TGG | 0.292543 | 2.4:-2826296 | MS.gene89109:CDS |
| ATAATTCTGATGAAGAATTA+TGG | 0.326945 | 2.4:-2822217 | MS.gene89109:CDS |
| CGCGTTCCTGAAGTAGTTCC+TGG | 0.331512 | 2.4:+2820345 | None:intergenic |
| TTGATACGGTTAGTCAAGTT+AGG | 0.332171 | 2.4:-2826306 | MS.gene89109:CDS |
| GTTGAAGCTGAAGAAGATTA+AGG | 0.365406 | 2.4:-2826596 | MS.gene89109:CDS |
| ATTATATTCCATTCTTGAAA+TGG | 0.366927 | 2.4:+2822235 | None:intergenic |
| TGAATCCACAAAGCAGCGTT+TGG | 0.384724 | 2.4:-2820681 | MS.gene89109:CDS |
| AGTCAAGTTAGGGGCAAAAT+GGG | 0.396713 | 2.4:-2826295 | MS.gene89109:CDS |
| ACTGTTATATTTCTCGCTTA+AGG | 0.400511 | 2.4:+2820616 | None:intergenic |
| TCTGATCCAGGAACTACTTC+AGG | 0.411288 | 2.4:-2820351 | MS.gene89109:CDS |
| GAATGGGCACGTGAGGGCTA+TGG | 0.456284 | 2.4:-2826428 | MS.gene89109:CDS |
| TGATACGGTTAGTCAAGTTA+GGG | 0.457996 | 2.4:-2826305 | MS.gene89109:CDS |
| GGCTATGGGATCTTCATTTG+TGG | 0.458085 | 2.4:-2826413 | MS.gene89109:CDS |
| CCCGTCCCAGAGTCTGATCC+AGG | 0.463701 | 2.4:-2820363 | MS.gene89109:CDS |
| GCAAGCAGCCATTTCAAGAA+TGG | 0.468277 | 2.4:-2822243 | MS.gene89109:CDS |
| CCTCGTGAAGACAGTGTTGA+CGG | 0.471481 | 2.4:+2826060 | None:intergenic |
| TCCAACAACAACACTATCTC+AGG | 0.473538 | 2.4:+2826355 | None:intergenic |
| GGCACGTGACTTCGAAGAAT+GGG | 0.476369 | 2.4:-2826444 | MS.gene89109:CDS |
| ACCTGAGATAGTGTTGTTGT+TGG | 0.476726 | 2.4:-2826356 | MS.gene89109:CDS |
| AATGGGCACGTGAGGGCTAT+GGG | 0.477387 | 2.4:-2826427 | MS.gene89109:CDS |
| AAATGTTGACGTTTATTCCA+TGG | 0.481008 | 2.4:-2826515 | MS.gene89109:CDS |
| ACTTCCAGCTCTGACAACTT+TGG | 0.488730 | 2.4:+2820761 | None:intergenic |
| ACGGGGACTCCGATCGGAGG+TGG | 0.488905 | 2.4:+2820381 | None:intergenic |
| GTAGTTCCTGGATCAGACTC+TGG | 0.494492 | 2.4:+2820357 | None:intergenic |
| GGGCACGTGACTTCGAAGAA+TGG | 0.502859 | 2.4:-2826445 | MS.gene89109:CDS |
| GTTGTTGGAGGACCTTGCTA+AGG | 0.507070 | 2.4:-2826341 | MS.gene89109:CDS |
| GATGCAGAATTCAGTGGTAT+TGG | 0.514947 | 2.4:-2826385 | MS.gene89109:CDS |
| CCTGGATCAGACTCTGGGAC+GGG | 0.515585 | 2.4:+2820363 | None:intergenic |
| AGAACCAAAGTTGTCAGAGC+TGG | 0.517038 | 2.4:-2820765 | MS.gene89109:CDS |
| GACGTTTATTCCATGGACTT+TGG | 0.517964 | 2.4:-2826508 | MS.gene89109:CDS |
| AACCGTACGATCTTGAGGTA+TGG | 0.521084 | 2.4:+2826616 | None:intergenic |
| AGCAGCGTTTGGAAAAGAAA+GGG | 0.528574 | 2.4:-2820670 | MS.gene89109:CDS |
| TCTTATAGAGGGAAACCACT+TGG | 0.536597 | 2.4:-2826466 | MS.gene89109:CDS |
| ATCGGAGGTGGTCTTGAAGA+TGG | 0.536628 | 2.4:+2820393 | None:intergenic |
| TCTGGGACGGGGACTCCGAT+CGG | 0.537597 | 2.4:+2820375 | None:intergenic |
| AAGCAGCGTTTGGAAAAGAA+AGG | 0.541865 | 2.4:-2820671 | MS.gene89109:CDS |
| GGGTATGATACCCTTTGATA+CGG | 0.543076 | 2.4:-2826320 | MS.gene89109:CDS |
| TGAGATAGTGTTGTTGTTGG+AGG | 0.545985 | 2.4:-2826353 | MS.gene89109:CDS |
| CTGGATCAGACTCTGGGACG+GGG | 0.547882 | 2.4:+2820364 | None:intergenic |
| CTTCGAAGAATGGGCACGTG+AGG | 0.549210 | 2.4:-2826435 | MS.gene89109:CDS |
| TTGTTGGAGGACCTTGCTAA+GGG | 0.551961 | 2.4:-2826340 | MS.gene89109:CDS |
| CACTCTCAACGTGAAGAGCA+TGG | 0.555106 | 2.4:+2826540 | None:intergenic |
| GATAGGTGGTGATGCTCTCA+AGG | 0.556282 | 2.4:+2820431 | None:intergenic |
| GTCAACAGCACCAAAGTCCA+TGG | 0.556982 | 2.4:+2826498 | None:intergenic |
| AACTTGACTAACCGTATCAA+AGG | 0.559559 | 2.4:+2826309 | None:intergenic |
| ACTTGACTAACCGTATCAAA+GGG | 0.561858 | 2.4:+2826310 | None:intergenic |
| GGTGTTGGTTGAAAGTAGAT+AGG | 0.562879 | 2.4:+2820414 | None:intergenic |
| ATCCATACCTCAAGATCGTA+CGG | 0.564124 | 2.4:-2826618 | MS.gene89109:CDS |
| GCTTCAACCGTACGATCTTG+AGG | 0.564157 | 2.4:+2826611 | None:intergenic |
| ATCTTGAGGTATGGATCTGA+CGG | 0.564383 | 2.4:+2826625 | None:intergenic |
| CATGCTCTTCACGTTGAGAG+TGG | 0.566163 | 2.4:-2826539 | MS.gene89109:CDS |
| GACGTGGCGGTATCTTATAG+AGG | 0.568477 | 2.4:-2826478 | MS.gene89109:CDS |
| TTCGAAGTCACGTGCCCAAG+TGG | 0.585354 | 2.4:+2826451 | None:intergenic |
| GAAATATAACAGTGTTAGAG+AGG | 0.588321 | 2.4:-2820606 | MS.gene89109:CDS |
| GGGACGGGGACTCCGATCGG+AGG | 0.591662 | 2.4:+2820378 | None:intergenic |
| GGTGGTCTTGAAGATGGTGT+TGG | 0.596345 | 2.4:+2820399 | None:intergenic |
| CTTATAGAGGGAAACCACTT+GGG | 0.598189 | 2.4:-2826465 | MS.gene89109:CDS |
| TCCTGGATCAGACTCTGGGA+CGG | 0.598644 | 2.4:+2820362 | None:intergenic |
| TAGTTCCTGGATCAGACTCT+GGG | 0.601819 | 2.4:+2820358 | None:intergenic |
| TTCGAAGAATGGGCACGTGA+GGG | 0.610158 | 2.4:-2826434 | MS.gene89109:CDS |
| GAAGAGCATGGAGATATCTA+CGG | 0.612242 | 2.4:+2826552 | None:intergenic |
| CGTGAGCTCTCTCAATGCAA+TGG | 0.617999 | 2.4:-2822194 | MS.gene89109:CDS |
| GATACGGTTAGTCAAGTTAG+GGG | 0.618576 | 2.4:-2826304 | MS.gene89109:CDS |
| GGACTTTGGTGCTGTTGACG+TGG | 0.632167 | 2.4:-2826494 | MS.gene89109:CDS |
| TCTTCAAGACCACCTCCGAT+CGG | 0.639349 | 2.4:-2820390 | MS.gene89109:CDS |
| AGGGTATCATACCCTTAGCA+AGG | 0.651835 | 2.4:+2826329 | None:intergenic |
| GAGATATCTACGGTGATATG+CGG | 0.652943 | 2.4:+2826562 | None:intergenic |
| ACGTGGCGGTATCTTATAGA+GGG | 0.653035 | 2.4:-2826477 | MS.gene89109:CDS |
| GAGCTCTCTCAATGCAATGG+TGG | 0.653924 | 2.4:-2822191 | MS.gene89109:intron |
| GTCAAGTTAGGGGCAAAATG+GGG | 0.655267 | 2.4:-2826294 | MS.gene89109:CDS |
| ATAGGCTAAACTATCATGTG+CGG | 0.659678 | 2.4:-2826114 | MS.gene89109:intron |
| GCAGCGTTTGGAAAAGAAAG+GGG | 0.660036 | 2.4:-2820669 | MS.gene89109:CDS |
| TGACGGATAGAAAATATACA+TGG | 0.674941 | 2.4:+2826642 | None:intergenic |
| CTTTGGTGCTGTTGACGTGG+CGG | 0.678358 | 2.4:-2826491 | MS.gene89109:CDS |
| CCGTCAACACTGTCTTCACG+AGG | 0.684740 | 2.4:-2826060 | MS.gene89109:intron |
| CAGCGTTTGGAAAAGAAAGG+GGG | 0.692657 | 2.4:-2820668 | MS.gene89109:CDS |
| GATGCTGATGCAGAATTCAG+TGG | 0.701186 | 2.4:-2826391 | MS.gene89109:CDS |
| GTTGGTTGAAAGTAGATAGG+TGG | 0.718597 | 2.4:+2820417 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAGATATTTGA+AGG | - | chr2.4:2824213-2824232 | MS.gene89109:intron | 10.0% |
| !!! | ATTTCAAAATATTTTGAATT+TGG | + | chr2.4:2825612-2825631 | None:intergenic | 10.0% |
| !!! | ATTTTTTAATAATTTGAGTT+AGG | - | chr2.4:2820792-2820811 | MS.gene89109:intron | 10.0% |
| !!! | TTCATATATTTTAACATAAT+CGG | + | chr2.4:2824319-2824338 | None:intergenic | 10.0% |
| !!! | TTTAATTTGTGATTAATATT+GGG | - | chr2.4:2825500-2825519 | MS.gene89109:intron | 10.0% |
| !!! | TTTTTCTTTTCATTTTATTA+GGG | - | chr2.4:2824697-2824716 | MS.gene89109:intron | 10.0% |
| !!! | TTTTTTCTTTTCATTTTATT+AGG | - | chr2.4:2824696-2824715 | MS.gene89109:intron | 10.0% |
| !! | AAAAAATAATAAGAAGACAA+TGG | + | chr2.4:2824824-2824843 | None:intergenic | 15.0% |
| !! | AAATAAAAAGAAAAACAACT+TGG | + | chr2.4:2824503-2824522 | None:intergenic | 15.0% |
| !! | AAATGTATAATTACCAAAAT+GGG | - | chr2.4:2821921-2821940 | MS.gene89109:intron | 15.0% |
| !! | AAGAAATCCATAATATAAAT+AGG | - | chr2.4:2822168-2822187 | MS.gene89109:intron | 15.0% |
| !! | ATAGTAAATGGTTAAAATTA+AGG | + | chr2.4:2826089-2826108 | None:intergenic | 15.0% |
| !! | ATGATTAAACTTATAAATTG+CGG | - | chr2.4:2824186-2824205 | MS.gene89109:intron | 15.0% |
| !! | TAAATGTATAATTACCAAAA+TGG | - | chr2.4:2821920-2821939 | MS.gene89109:intron | 15.0% |
| !! | TTCAAAAAAGTAAAATCATT+GGG | + | chr2.4:2825455-2825474 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAGTAAAATCAT+TGG | + | chr2.4:2825456-2825475 | None:intergenic | 15.0% |
| !!! | AAAAAACGATTTTTAATTGT+TGG | - | chr2.4:2824403-2824422 | MS.gene89109:intron | 15.0% |
| !!! | AAAATATTTTGAAATTGCAA+GGG | - | chr2.4:2825617-2825636 | MS.gene89109:intron | 15.0% |
| !!! | ATTTGAAAGTACTTTTAATT+TGG | - | chr2.4:2825043-2825062 | MS.gene89109:intron | 15.0% |
| !!! | GTTTAATTTGTGATTAATAT+TGG | - | chr2.4:2825499-2825518 | MS.gene89109:intron | 15.0% |
| !!! | TGTGAGTTTTTTTTTTTAAT+TGG | - | chr2.4:2825104-2825123 | MS.gene89109:intron | 15.0% |
| !!! | TTAATTTGTGATTAATATTG+GGG | - | chr2.4:2825501-2825520 | MS.gene89109:intron | 15.0% |
| !! | AACGTCAAAATAAATAAAAG+TGG | - | chr2.4:2822209-2822228 | MS.gene89109:CDS | 20.0% |
| !! | AAGAAAATGATTTACCTTAA+TGG | + | chr2.4:2820720-2820739 | None:intergenic | 20.0% |
| !! | AATCCATAATATAAATAGGT+AGG | - | chr2.4:2822172-2822191 | MS.gene89109:intron | 20.0% |
| !! | AATGCAATAATGATATAAAC+AGG | + | chr2.4:2823231-2823250 | None:intergenic | 20.0% |
| !! | AATTCTTGCAACAAATAATA+AGG | - | chr2.4:2823939-2823958 | MS.gene89109:intron | 20.0% |
| !! | ACGTCAAAATAAATAAAAGT+GGG | - | chr2.4:2822210-2822229 | MS.gene89109:CDS | 20.0% |
| !! | AGAAAATGATTTACCTTAAT+GGG | + | chr2.4:2820719-2820738 | None:intergenic | 20.0% |
| !! | AGAAAGAAAGAAAGAAAAAA+AGG | + | chr2.4:2824539-2824558 | None:intergenic | 20.0% |
| !! | AGTAAAAACGAAAAAATGTT+TGG | - | chr2.4:2823751-2823770 | MS.gene89109:intron | 20.0% |
| !! | ATAATTCTGATGAAGAATTA+TGG | - | chr2.4:2824752-2824771 | MS.gene89109:intron | 20.0% |
| !! | ATCACAATATAAAATTGTCA+AGG | + | chr2.4:2823527-2823546 | None:intergenic | 20.0% |
| !! | ATGCAATAATGATATAAACA+GGG | + | chr2.4:2823230-2823249 | None:intergenic | 20.0% |
| !! | ATTATATTCCATTCTTGAAA+TGG | + | chr2.4:2824737-2824756 | None:intergenic | 20.0% |
| !! | CAAGTAAATAAAAATTCGTT+TGG | + | chr2.4:2821155-2821174 | None:intergenic | 20.0% |
| !! | CATAATTGGTTATTATTTCA+CGG | - | chr2.4:2822764-2822783 | MS.gene89109:intron | 20.0% |
| !! | GTCTTAGAAATTAGTATTTA+GGG | - | chr2.4:2825384-2825403 | MS.gene89109:intron | 20.0% |
| !! | TGATTAAACTTATAAATTGC+GGG | - | chr2.4:2824187-2824206 | MS.gene89109:intron | 20.0% |
| !! | TGCATTCAAACTAAAAATTT+GGG | - | chr2.4:2823245-2823264 | MS.gene89109:intron | 20.0% |
| !! | TGGTACATATATATATACAA+CGG | + | chr2.4:2821658-2821677 | None:intergenic | 20.0% |
| !! | TTGCATTCAAACTAAAAATT+TGG | - | chr2.4:2823244-2823263 | MS.gene89109:intron | 20.0% |
| !! | TTGCTAAAAAATTGATGTTT+GGG | + | chr2.4:2822513-2822532 | None:intergenic | 20.0% |
| !! | TTGCTTCTTTAATTAAAATG+AGG | - | chr2.4:2820983-2821002 | MS.gene89109:intron | 20.0% |
| !! | TTTGCTAAAAAATTGATGTT+TGG | + | chr2.4:2822514-2822533 | None:intergenic | 20.0% |
| !!! | AACGTTTTCAAATGAAAAAT+TGG | + | chr2.4:2825082-2825101 | None:intergenic | 20.0% |
| !!! | AATTATAATGAAACCCATTT+TGG | + | chr2.4:2821937-2821956 | None:intergenic | 20.0% |
| !!! | ACATTGACTAAAAGAATTAT+TGG | - | chr2.4:2821107-2821126 | MS.gene89109:intron | 20.0% |
| !!! | AGAAGATTCTTGATTTTTTT+TGG | + | chr2.4:2825237-2825256 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTCCCAATAAT+AGG | - | chr2.4:2820837-2820856 | MS.gene89109:intron | 20.0% |
| !!! | ATGCAATATACGTTTAAAAT+AGG | + | chr2.4:2822818-2822837 | None:intergenic | 20.0% |
| !!! | ATTTAAATTCACGTTTTTCA+TGG | + | chr2.4:2822144-2822163 | None:intergenic | 20.0% |
| !!! | ATTTTGACAAAAAAAGAAAG+AGG | + | chr2.4:2823376-2823395 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTGAAATTGCA+AGG | - | chr2.4:2825616-2825635 | MS.gene89109:intron | 20.0% |
| !!! | CAAACGAATTTTTATTTACT+TGG | - | chr2.4:2821153-2821172 | MS.gene89109:intron | 20.0% |
| !!! | CAATTTTTATAAGATCGAAT+TGG | - | chr2.4:2823610-2823629 | MS.gene89109:intron | 20.0% |
| !!! | CATTCTCTTTGAAAAAAAAT+AGG | - | chr2.4:2824935-2824954 | MS.gene89109:intron | 20.0% |
| !!! | CGTTAAAAAAAGTTTTGTTT+TGG | - | chr2.4:2824114-2824133 | MS.gene89109:intron | 20.0% |
| !!! | CTATTTTTTTTCAAAGAGAA+TGG | + | chr2.4:2824937-2824956 | None:intergenic | 20.0% |
| !!! | CTTATTTTTAAAATTGAGTC+TGG | + | chr2.4:2822487-2822506 | None:intergenic | 20.0% |
| !!! | GAAGATTCTTGATTTTTTTT+GGG | + | chr2.4:2825236-2825255 | None:intergenic | 20.0% |
| !!! | GCTTTAAGTTTTAACATAAT+TGG | - | chr2.4:2822750-2822769 | MS.gene89109:intron | 20.0% |
| !!! | GGATATTAATTTTTGGTTTA+GGG | + | chr2.4:2823071-2823090 | None:intergenic | 20.0% |
| !!! | TGCAATATACGTTTAAAATA+GGG | + | chr2.4:2822817-2822836 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAACTCTTCAAAT+TGG | + | chr2.4:2821331-2821350 | None:intergenic | 20.0% |
| ! | AAAAAGACTTAATGTGCAAA+AGG | + | chr2.4:2825702-2825721 | None:intergenic | 25.0% |
| ! | AAATTATAAACCAAGTGGTA+AGG | - | chr2.4:2821030-2821049 | MS.gene89109:intron | 25.0% |
| ! | AAGCCTACCTATTTATATTA+TGG | + | chr2.4:2822178-2822197 | None:intergenic | 25.0% |
| ! | AATAAGACTAAGCTAATGTT+TGG | - | chr2.4:2821242-2821261 | MS.gene89109:intron | 25.0% |
| ! | AATCATGTCAAATAACATAG+CGG | + | chr2.4:2826497-2826516 | None:intergenic | 25.0% |
| ! | AATCATTGGGTTAATGAAAT+TGG | + | chr2.4:2825442-2825461 | None:intergenic | 25.0% |
| ! | AATGAAAAAAATGAGAGAGA+TGG | + | chr2.4:2823484-2823503 | None:intergenic | 25.0% |
| ! | ACATATGATTATGAAGAACT+TGG | + | chr2.4:2820747-2820766 | None:intergenic | 25.0% |
| ! | ACTATCCAAACAACATATAT+CGG | + | chr2.4:2821882-2821901 | None:intergenic | 25.0% |
| ! | AGTTGAAAAAAACGTATGTT+TGG | - | chr2.4:2821339-2821358 | MS.gene89109:intron | 25.0% |
| ! | ATCATTGGGTTAATGAAATT+GGG | + | chr2.4:2825441-2825460 | None:intergenic | 25.0% |
| ! | ATGATAGTTTAGCCTATTAT+TGG | + | chr2.4:2820852-2820871 | None:intergenic | 25.0% |
| ! | ATTCACTCAACAAATTATCT+AGG | + | chr2.4:2822332-2822351 | None:intergenic | 25.0% |
| ! | CAAAGTGATTCATATTTGTA+GGG | + | chr2.4:2824979-2824998 | None:intergenic | 25.0% |
| ! | CAAGTACCAACTATTTAAAT+GGG | + | chr2.4:2821687-2821706 | None:intergenic | 25.0% |
| ! | CCAAATAAAAATAAATGTCG+AGG | + | chr2.4:2826459-2826478 | None:intergenic | 25.0% |
| ! | CGAGTACTTATAATCATAAT+TGG | - | chr2.4:2822663-2822682 | MS.gene89109:intron | 25.0% |
| ! | GAAATCTTAATATATGACGA+AGG | - | chr2.4:2823961-2823980 | MS.gene89109:intron | 25.0% |
| ! | GATTAAACTTATAAATTGCG+GGG | - | chr2.4:2824188-2824207 | MS.gene89109:intron | 25.0% |
| ! | GGTACATATATATATACAAC+GGG | + | chr2.4:2821657-2821676 | None:intergenic | 25.0% |
| ! | GGTCTTAGAAATTAGTATTT+AGG | - | chr2.4:2825383-2825402 | MS.gene89109:intron | 25.0% |
| ! | GTGTAAAATTATAAACCAAG+TGG | - | chr2.4:2821025-2821044 | MS.gene89109:intron | 25.0% |
| ! | TAAACTTATATCTTTCCTTC+CGG | + | chr2.4:2821186-2821205 | None:intergenic | 25.0% |
| ! | TAAGAAATGCTTGAATTTAG+AGG | - | chr2.4:2823572-2823591 | MS.gene89109:intron | 25.0% |
| ! | TAATAAGAAGACAATGGTAA+AGG | + | chr2.4:2824818-2824837 | None:intergenic | 25.0% |
| ! | TATATAACCGATTACTACTA+GGG | - | chr2.4:2826130-2826149 | MS.gene89109:intron | 25.0% |
| ! | TATATCCTTGTGTGAAATAT+TGG | - | chr2.4:2825846-2825865 | MS.gene89109:intron | 25.0% |
| ! | TATATGATTTAGTGTGTGTT+TGG | - | chr2.4:2821737-2821756 | MS.gene89109:intron | 25.0% |
| ! | TATGATTATAAGTACTCGTT+TGG | + | chr2.4:2822661-2822680 | None:intergenic | 25.0% |
| ! | TCAAAGTGATTCATATTTGT+AGG | + | chr2.4:2824980-2824999 | None:intergenic | 25.0% |
| ! | TGATAGTTTAGCCTATTATT+GGG | + | chr2.4:2820851-2820870 | None:intergenic | 25.0% |
| ! | TTAAAATTAAGGTGAACACT+CGG | + | chr2.4:2826078-2826097 | None:intergenic | 25.0% |
| ! | TTAATCCAATATTTCACACA+AGG | + | chr2.4:2825854-2825873 | None:intergenic | 25.0% |
| ! | TTAATGAAATTGGGGATTTA+GGG | + | chr2.4:2825432-2825451 | None:intergenic | 25.0% |
| ! | TTATACACCAACTTATTCTT+AGG | - | chr2.4:2823171-2823190 | MS.gene89109:intron | 25.0% |
| ! | TTATATAACCGATTACTACT+AGG | - | chr2.4:2826129-2826148 | MS.gene89109:intron | 25.0% |
| ! | TTGAGTTAGGTTATAGTTTA+TGG | - | chr2.4:2820805-2820824 | MS.gene89109:intron | 25.0% |
| !! | AATCTGGGGATATTAATTTT+TGG | + | chr2.4:2823078-2823097 | None:intergenic | 25.0% |
| !! | AGAGATTTGAAATTCAATCT+GGG | + | chr2.4:2823093-2823112 | None:intergenic | 25.0% |
| !! | ATTCTTTTACTTTCCCATTA+AGG | - | chr2.4:2820703-2820722 | MS.gene89109:CDS | 25.0% |
| !! | ATTTTGCATATGTATGTGTT+CGG | - | chr2.4:2821412-2821431 | MS.gene89109:intron | 25.0% |
| !! | CGGTTAATTTAGATTTTTGT+TGG | + | chr2.4:2826058-2826077 | None:intergenic | 25.0% |
| !! | GCAATATACGTTTAAAATAG+GGG | + | chr2.4:2822816-2822835 | None:intergenic | 25.0% |
| !! | GGTAAGGTTTATTTGTTAAT+GGG | - | chr2.4:2821046-2821065 | MS.gene89109:intron | 25.0% |
| !! | TAGAGATTTGAAATTCAATC+TGG | + | chr2.4:2823094-2823113 | None:intergenic | 25.0% |
| !! | TGGTAAGGTTTATTTGTTAA+TGG | - | chr2.4:2821045-2821064 | MS.gene89109:intron | 25.0% |
| !! | TTCAAAAGATCTGAGTTTTA+TGG | - | chr2.4:2825344-2825363 | MS.gene89109:intron | 25.0% |
| !!! | AAAAAAGTTTTGTTTTGGAG+AGG | - | chr2.4:2824119-2824138 | MS.gene89109:intron | 25.0% |
| !!! | AAGAATAAGTTGGTGTATAA+TGG | + | chr2.4:2823171-2823190 | None:intergenic | 25.0% |
| !!! | AGATAATTTGTTGAGTGAAT+TGG | - | chr2.4:2822332-2822351 | MS.gene89109:intron | 25.0% |
| !!! | AGATCTTGTAGATTTGTTTT+GGG | + | chr2.4:2825286-2825305 | None:intergenic | 25.0% |
| !!! | AGGAGTTTAAGTTGAAATAA+AGG | - | chr2.4:2824233-2824252 | MS.gene89109:intron | 25.0% |
| !!! | AGTTTAAGTTGAAATAAAGG+AGG | - | chr2.4:2824236-2824255 | MS.gene89109:intron | 25.0% |
| !!! | CCTCGACATTTATTTTTATT+TGG | - | chr2.4:2826456-2826475 | MS.gene89109:CDS | 25.0% |
| !!! | GAGTGAAATTAATTTGTGTT+TGG | - | chr2.4:2821830-2821849 | MS.gene89109:intron | 25.0% |
| !!! | GATTTTTTTAGCTTAAGACA+AGG | - | chr2.4:2826513-2826532 | MS.gene89109:CDS | 25.0% |
| !!! | GGGATATTAATTTTTGGTTT+AGG | + | chr2.4:2823072-2823091 | None:intergenic | 25.0% |
| !!! | GTTTAAGTTGAAATAAAGGA+GGG | - | chr2.4:2824237-2824256 | MS.gene89109:intron | 25.0% |
| !!! | TCAAAAGATCTGAGTTTTAT+GGG | - | chr2.4:2825345-2825364 | MS.gene89109:intron | 25.0% |
| !!! | TTTTTTTCGACAGAAAAATC+AGG | + | chr2.4:2821533-2821552 | None:intergenic | 25.0% |
| AAACATTCCCTAGTAGTAAT+CGG | + | chr2.4:2826140-2826159 | None:intergenic | 30.0% | |
| AAATGTTGACGTTTATTCCA+TGG | - | chr2.4:2820454-2820473 | MS.gene89109:intron | 30.0% | |
| AACAAATAAACCTTACCACT+TGG | + | chr2.4:2821043-2821062 | None:intergenic | 30.0% | |
| AATAGTAAAACACTCGTATC+AGG | + | chr2.4:2824039-2824058 | None:intergenic | 30.0% | |
| AATTTACTCGTCAAATGATG+AGG | - | chr2.4:2823989-2824008 | MS.gene89109:intron | 30.0% | |
| ACAGTCACATGTATAGTAAA+TGG | + | chr2.4:2826101-2826120 | None:intergenic | 30.0% | |
| ACATATCATCCAAATACTCT+TGG | + | chr2.4:2823803-2823822 | None:intergenic | 30.0% | |
| ACTGTTATATTTCTCGCTTA+AGG | + | chr2.4:2826356-2826375 | None:intergenic | 30.0% | |
| AGCATGAATTATTCTTGATC+TGG | + | chr2.4:2825197-2825216 | None:intergenic | 30.0% | |
| AGTGAATTGGTATAAAGGAA+AGG | - | chr2.4:2822345-2822364 | MS.gene89109:intron | 30.0% | |
| ATCTTTCATGCAACATTGAT+TGG | - | chr2.4:2825938-2825957 | MS.gene89109:intron | 30.0% | |
| CATATCATCCAAATACTCTT+GGG | + | chr2.4:2823802-2823821 | None:intergenic | 30.0% | |
| CCAAGTACCAACTATTTAAA+TGG | + | chr2.4:2821688-2821707 | None:intergenic | 30.0% | |
| GAAAAAAACGTATGTTTGGT+GGG | - | chr2.4:2821343-2821362 | MS.gene89109:intron | 30.0% | |
| GAAATATAACAGTGTTAGAG+AGG | - | chr2.4:2826363-2826382 | MS.gene89109:CDS | 30.0% | |
| GAAGTTTAAACTCACGTTTA+CGG | - | chr2.4:2822620-2822639 | MS.gene89109:intron | 30.0% | |
| GAATTTACACAAGTATACAC+AGG | - | chr2.4:2823643-2823662 | MS.gene89109:intron | 30.0% | |
| GTAATATAGAGAATGAGAGA+TGG | - | chr2.4:2823342-2823361 | MS.gene89109:intron | 30.0% | |
| GTTAATGAAATTGGGGATTT+AGG | + | chr2.4:2825433-2825452 | None:intergenic | 30.0% | |
| TAGTGCAATTTATGATCTAC+AGG | - | chr2.4:2822286-2822305 | MS.gene89109:intron | 30.0% | |
| TATGGGCATTTGTATGATTT+CGG | - | chr2.4:2825362-2825381 | MS.gene89109:intron | 30.0% | |
| TCATTGGGTTAATGAAATTG+GGG | + | chr2.4:2825440-2825459 | None:intergenic | 30.0% | |
| TGAAAAAAACGTATGTTTGG+TGG | - | chr2.4:2821342-2821361 | MS.gene89109:intron | 30.0% | |
| TGTTGAGTGAATTGGTATAA+AGG | - | chr2.4:2822340-2822359 | MS.gene89109:intron | 30.0% | |
| TTATTTACTTGGTCTCTTTC+CGG | - | chr2.4:2821164-2821183 | MS.gene89109:intron | 30.0% | |
| ! | ACTAAGCTAATGTTTGGTTT+GGG | - | chr2.4:2821248-2821267 | MS.gene89109:intron | 30.0% |
| ! | ATTCTAGCTGAAAAATCAAG+TGG | - | chr2.4:2826397-2826416 | MS.gene89109:CDS | 30.0% |
| ! | ATTTTCTGATCATTCTTCAC+TGG | + | chr2.4:2821628-2821647 | None:intergenic | 30.0% |
| ! | ATTTTGAATTTGGTCCTTCA+TGG | + | chr2.4:2825602-2825621 | None:intergenic | 30.0% |
| ! | CCATTTAAATAGTTGGTACT+TGG | - | chr2.4:2821685-2821704 | MS.gene89109:intron | 30.0% |
| ! | GAGATTTGAAATTCAATCTG+GGG | + | chr2.4:2823092-2823111 | None:intergenic | 30.0% |
| ! | TTTTGCATATGTATGTGTTC+GGG | - | chr2.4:2821413-2821432 | MS.gene89109:intron | 30.0% |
| !! | AAATTGTCACTTTGTCACTT+TGG | - | chr2.4:2823044-2823063 | MS.gene89109:intron | 30.0% |
| !! | AATAGTAGCTTTTGGAAACA+CGG | + | chr2.4:2822434-2822453 | None:intergenic | 30.0% |
| !! | CAGATCTTGTAGATTTGTTT+TGG | + | chr2.4:2825287-2825306 | None:intergenic | 30.0% |
| !!! | GAGTTTCTTTATTTTTTGCG+TGG | + | chr2.4:2823868-2823887 | None:intergenic | 30.0% |
| !!! | GATCTTGTAGATTTGTTTTG+GGG | + | chr2.4:2825285-2825304 | None:intergenic | 30.0% |
| !!! | GTTGTCAATTTTTTCCATGA+AGG | - | chr2.4:2825585-2825604 | MS.gene89109:intron | 30.0% |
| !!! | TACTGACTTGTGATTCTTTT+TGG | - | chr2.4:2825168-2825187 | MS.gene89109:intron | 30.0% |
| AACTTGACTAACCGTATCAA+AGG | + | chr2.4:2820663-2820682 | None:intergenic | 35.0% | |
| ACTATTTAAATGGGTGGTAG+TGG | + | chr2.4:2821678-2821697 | None:intergenic | 35.0% | |
| ACTTGACTAACCGTATCAAA+GGG | + | chr2.4:2820662-2820681 | None:intergenic | 35.0% | |
| ATAGGCTAAACTATCATGTG+CGG | - | chr2.4:2820855-2820874 | MS.gene89109:intron | 35.0% | |
| ATGCTTCATAGATAGATGGT+AGG | - | chr2.4:2824070-2824089 | MS.gene89109:intron | 35.0% | |
| CAACCAACTTCATCTCATTA+AGG | - | chr2.4:2823427-2823446 | MS.gene89109:intron | 35.0% | |
| CTACCACCCATTTAAATAGT+TGG | - | chr2.4:2821678-2821697 | MS.gene89109:intron | 35.0% | |
| GACTAAGCTAATGTTTGGTT+TGG | - | chr2.4:2821247-2821266 | MS.gene89109:intron | 35.0% | |
| GTACCAACTATTTAAATGGG+TGG | + | chr2.4:2821684-2821703 | None:intergenic | 35.0% | |
| GTGCATACTTACTATCAGTT+AGG | - | chr2.4:2823203-2823222 | MS.gene89109:intron | 35.0% | |
| GTTGAAGCTGAAGAAGATTA+AGG | - | chr2.4:2820373-2820392 | MS.gene89109:CDS | 35.0% | |
| TCAAAATGATCACCATTTGC+AGG | - | chr2.4:2825675-2825694 | MS.gene89109:intron | 35.0% | |
| TCACATGCTTCATAGATAGA+TGG | - | chr2.4:2824066-2824085 | MS.gene89109:intron | 35.0% | |
| TCACTTGAAGACACATAGTT+TGG | - | chr2.4:2821071-2821090 | MS.gene89109:intron | 35.0% | |
| TCAGAGACCTAAGAATAAGT+TGG | + | chr2.4:2823181-2823200 | None:intergenic | 35.0% | |
| TCCAAACAACATATATCGGT+AGG | + | chr2.4:2821878-2821897 | None:intergenic | 35.0% | |
| TCCTACCGATATATGTTGTT+TGG | - | chr2.4:2821874-2821893 | MS.gene89109:intron | 35.0% | |
| TTCGTTATCACTTTAGTCTC+TGG | - | chr2.4:2822932-2822951 | MS.gene89109:intron | 35.0% | |
| ! | AAGCTGGTAATAGTAGCTTT+TGG | + | chr2.4:2822442-2822461 | None:intergenic | 35.0% |
| ! | TAAACTATCATGTGCGGTTT+TGG | - | chr2.4:2820861-2820880 | MS.gene89109:intron | 35.0% |
| ! | TCTCTTCAGCTCTTCAATTT+TGG | + | chr2.4:2826263-2826282 | None:intergenic | 35.0% |
| ! | TGATACGGTTAGTCAAGTTA+GGG | - | chr2.4:2820664-2820683 | MS.gene89109:CDS | 35.0% |
| ! | TTGATACGGTTAGTCAAGTT+AGG | - | chr2.4:2820663-2820682 | MS.gene89109:CDS | 35.0% |
| !! | CAATTTTGATCCAAGCATTG+GGG | + | chr2.4:2821713-2821732 | None:intergenic | 35.0% |
| !! | CTCTTTTTCATCTCGATCTA+GGG | - | chr2.4:2824557-2824576 | MS.gene89109:intron | 35.0% |
| !! | GCAATTTTGATCCAAGCATT+GGG | + | chr2.4:2821714-2821733 | None:intergenic | 35.0% |
| !! | TCTCTTTTTCATCTCGATCT+AGG | - | chr2.4:2824556-2824575 | MS.gene89109:intron | 35.0% |
| !! | TGCAATTTTGATCCAAGCAT+TGG | + | chr2.4:2821715-2821734 | None:intergenic | 35.0% |
| AAAGCAATTCCAGTAGAAGC+TGG | + | chr2.4:2822458-2822477 | None:intergenic | 40.0% | |
| AAGCAGCGTTTGGAAAAGAA+AGG | - | chr2.4:2826298-2826317 | MS.gene89109:CDS | 40.0% | |
| AATAACATAGCGGTCAGTAC+AGG | + | chr2.4:2826487-2826506 | None:intergenic | 40.0% | |
| ACGGATATCATCCCAATGTT+GGG | - | chr2.4:2822783-2822802 | MS.gene89109:intron | 40.0% | |
| AGCAGCGTTTGGAAAAGAAA+GGG | - | chr2.4:2826299-2826318 | MS.gene89109:CDS | 40.0% | |
| AGTCAAGTTAGGGGCAAAAT+GGG | - | chr2.4:2820674-2820693 | MS.gene89109:CDS | 40.0% | |
| ATATCATCCCAATGTTGGGT+TGG | - | chr2.4:2822787-2822806 | MS.gene89109:intron | 40.0% | |
| ATCCATACCTCAAGATCGTA+CGG | - | chr2.4:2820351-2820370 | MS.gene89109:CDS | 40.0% | |
| ATCTTGAGGTATGGATCTGA+CGG | + | chr2.4:2820347-2820366 | None:intergenic | 40.0% | |
| ATGACATGACTTACGTGACT+AGG | + | chr2.4:2825551-2825570 | None:intergenic | 40.0% | |
| CCAACTTCATCTCATTAAGG+TGG | - | chr2.4:2823430-2823449 | MS.gene89109:intron | 40.0% | |
| CCACCTTAATGAGATGAAGT+TGG | + | chr2.4:2823433-2823452 | None:intergenic | 40.0% | |
| CTACTATTACCAGCTTCTAC+TGG | - | chr2.4:2822446-2822465 | MS.gene89109:intron | 40.0% | |
| CTTATAGAGGGAAACCACTT+GGG | - | chr2.4:2820504-2820523 | MS.gene89109:intron | 40.0% | |
| GACGTTTATTCCATGGACTT+TGG | - | chr2.4:2820461-2820480 | MS.gene89109:intron | 40.0% | |
| GAGATATCTACGGTGATATG+CGG | + | chr2.4:2820410-2820429 | None:intergenic | 40.0% | |
| GATGCAGAATTCAGTGGTAT+TGG | - | chr2.4:2820584-2820603 | MS.gene89109:CDS | 40.0% | |
| GGCTAATACAGTAACTTGAG+AGG | + | chr2.4:2826438-2826457 | None:intergenic | 40.0% | |
| GGGTATGATACCCTTTGATA+CGG | - | chr2.4:2820649-2820668 | MS.gene89109:CDS | 40.0% | |
| GTTGGTTGAAAGTAGATAGG+TGG | + | chr2.4:2826555-2826574 | None:intergenic | 40.0% | |
| TAGTCAAGTTAGGGGCAAAA+TGG | - | chr2.4:2820673-2820692 | MS.gene89109:CDS | 40.0% | |
| TCCAACAACAACACTATCTC+AGG | + | chr2.4:2820617-2820636 | None:intergenic | 40.0% | |
| TCTTATAGAGGGAAACCACT+TGG | - | chr2.4:2820503-2820522 | MS.gene89109:intron | 40.0% | |
| TTCTGATCATTCTTCACTGG+TGG | + | chr2.4:2821625-2821644 | None:intergenic | 40.0% | |
| ! | ACCTGAGATAGTGTTGTTGT+TGG | - | chr2.4:2820613-2820632 | MS.gene89109:CDS | 40.0% |
| ! | ATCGTCAGAGACTTTTGTGA+CGG | + | chr2.4:2822882-2822901 | None:intergenic | 40.0% |
| ! | ATTGGGGATTTAGGGTAAAG+AGG | + | chr2.4:2825424-2825443 | None:intergenic | 40.0% |
| ! | GAAGAGCATGGAGATATCTA+CGG | + | chr2.4:2820420-2820439 | None:intergenic | 40.0% |
| ! | GATACGGTTAGTCAAGTTAG+GGG | - | chr2.4:2820665-2820684 | MS.gene89109:CDS | 40.0% |
| ! | TGAGATAGTGTTGTTGTTGG+AGG | - | chr2.4:2820616-2820635 | MS.gene89109:CDS | 40.0% |
| !! | CTCGAATACCCAAGAGTATT+TGG | - | chr2.4:2823791-2823810 | MS.gene89109:intron | 40.0% |
| !! | GGTGTTGGTTGAAAGTAGAT+AGG | + | chr2.4:2826558-2826577 | None:intergenic | 40.0% |
| !! | TGTCACTTTGGTTTGTGCAT+TGG | + | chr2.4:2821298-2821317 | None:intergenic | 40.0% |
| !! | TTAGTGTGTGTTTGGTTCTG+CGG | - | chr2.4:2821745-2821764 | MS.gene89109:intron | 40.0% |
| AACCGTACGATCTTGAGGTA+TGG | + | chr2.4:2820356-2820375 | None:intergenic | 45.0% | |
| ACACTCGTATCAGGTACGTA+CGG | + | chr2.4:2824030-2824049 | None:intergenic | 45.0% | |
| ACGTGGCGGTATCTTATAGA+GGG | - | chr2.4:2820492-2820511 | MS.gene89109:intron | 45.0% | |
| AGAACCAAAGTTGTCAGAGC+TGG | - | chr2.4:2826204-2826223 | MS.gene89109:intron | 45.0% | |
| AGGGTATGTGAGCATAAAGG+GGG | - | chr2.4:2824256-2824275 | MS.gene89109:intron | 45.0% | |
| CACGGATATCATCCCAATGT+TGG | - | chr2.4:2822782-2822801 | MS.gene89109:intron | 45.0% | |
| CAGCGTTTGGAAAAGAAAGG+GGG | - | chr2.4:2826301-2826320 | MS.gene89109:CDS | 45.0% | |
| GATGCTGATGCAGAATTCAG+TGG | - | chr2.4:2820578-2820597 | MS.gene89109:CDS | 45.0% | |
| GCAAGCAGCCATTTCAAGAA+TGG | - | chr2.4:2824726-2824745 | MS.gene89109:intron | 45.0% | |
| GCAGCGTTTGGAAAAGAAAG+GGG | - | chr2.4:2826300-2826319 | MS.gene89109:CDS | 45.0% | |
| GGCTATGGGATCTTCATTTG+TGG | - | chr2.4:2820556-2820575 | MS.gene89109:intron | 45.0% | |
| GTCAAGTTAGGGGCAAAATG+GGG | - | chr2.4:2820675-2820694 | MS.gene89109:CDS | 45.0% | |
| TAAGTACTCGTTTGGTTGCG+TGG | + | chr2.4:2822653-2822672 | None:intergenic | 45.0% | |
| TAGTTCCTGGATCAGACTCT+GGG | + | chr2.4:2826614-2826633 | None:intergenic | 45.0% | |
| TCTGATCCAGGAACTACTTC+AGG | - | chr2.4:2826618-2826637 | MS.gene89109:CDS | 45.0% | |
| TGAATCCACAAAGCAGCGTT+TGG | - | chr2.4:2826288-2826307 | MS.gene89109:CDS | 45.0% | |
| TGTGCAAAAGGTCCTGCAAA+TGG | + | chr2.4:2825690-2825709 | None:intergenic | 45.0% | |
| TTACTTGGTCTCTTTCCGGA+AGG | - | chr2.4:2821168-2821187 | MS.gene89109:intron | 45.0% | |
| TTGTTGGAGGACCTTGCTAA+GGG | - | chr2.4:2820629-2820648 | MS.gene89109:CDS | 45.0% | |
| TTTCACCTTGCTAGTGCAGT+GGG | - | chr2.4:2826020-2826039 | MS.gene89109:intron | 45.0% | |
| ! | ACTTCCAGCTCTGACAACTT+TGG | + | chr2.4:2826211-2826230 | None:intergenic | 45.0% |
| ! | AGGAGGGTATGTGAGCATAA+AGG | - | chr2.4:2824253-2824272 | MS.gene89109:intron | 45.0% |
| ! | AGGGTATCATACCCTTAGCA+AGG | + | chr2.4:2820643-2820662 | None:intergenic | 45.0% |
| ! | GAGGGTATGTGAGCATAAAG+GGG | - | chr2.4:2824255-2824274 | MS.gene89109:intron | 45.0% |
| ! | GGAGCTTCTCAATGTCACTT+TGG | + | chr2.4:2821310-2821329 | None:intergenic | 45.0% |
| ! | GGAGGGTATGTGAGCATAAA+GGG | - | chr2.4:2824254-2824273 | MS.gene89109:intron | 45.0% |
| ! | TTTTCACCTTGCTAGTGCAG+TGG | - | chr2.4:2826019-2826038 | MS.gene89109:intron | 45.0% |
| !! | AGTAGCTTTTGGAAACACGG+TGG | + | chr2.4:2822431-2822450 | None:intergenic | 45.0% |
| !! | CTTTTCCAAACGCTGCTTTG+TGG | + | chr2.4:2826296-2826315 | None:intergenic | 45.0% |
| !! | GTAGCTTTTGGAAACACGGT+GGG | + | chr2.4:2822430-2822449 | None:intergenic | 45.0% |
| !! | AAAAAAAAATAAAAAAAATC+AGG | + | chr2.4:2821566-2821585 | None:intergenic | 5.0% |
| !! | ATAATTTAAATCATATATTA+AGG | - | chr2.4:2822099-2822118 | MS.gene89109:intron | 5.0% |
| !! | TAATTTAAATCATATATTAA+GGG | - | chr2.4:2822100-2822119 | MS.gene89109:intron | 5.0% |
| !!! | TTTATTTATTATTTTATGAA+TGG | + | chr2.4:2822395-2822414 | None:intergenic | 5.0% |
| ATAAGCCCACTGCACTAGCA+AGG | + | chr2.4:2826028-2826047 | None:intergenic | 50.0% | |
| CACTCTCAACGTGAAGAGCA+TGG | + | chr2.4:2820432-2820451 | None:intergenic | 50.0% | |
| CATGCTCTTCACGTTGAGAG+TGG | - | chr2.4:2820430-2820449 | MS.gene89109:CDS | 50.0% | |
| CGCGACCTCAAAATCCTTAG+AGG | - | chr2.4:2826643-2826662 | MS.gene89109:CDS | 50.0% | |
| CGTGAGCTCTCTCAATGCAA+TGG | - | chr2.4:2824775-2824794 | MS.gene89109:intron | 50.0% | |
| GACACCCACTATAGAGTCGA+TGG | - | chr2.4:2824654-2824673 | MS.gene89109:intron | 50.0% | |
| GACGGTGAGCTGCAAAGTTA+TGG | + | chr2.4:2822864-2822883 | None:intergenic | 50.0% | |
| GACGTGGCGGTATCTTATAG+AGG | - | chr2.4:2820491-2820510 | MS.gene89109:intron | 50.0% | |
| GAGCTCTCTCAATGCAATGG+TGG | - | chr2.4:2824778-2824797 | MS.gene89109:intron | 50.0% | |
| GCTTCAACCGTACGATCTTG+AGG | + | chr2.4:2820361-2820380 | None:intergenic | 50.0% | |
| GGCACGTGACTTCGAAGAAT+GGG | - | chr2.4:2820525-2820544 | MS.gene89109:intron | 50.0% | |
| GTACTTGGTACCCCAATGCT+TGG | - | chr2.4:2821700-2821719 | MS.gene89109:intron | 50.0% | |
| GTAGTTCCTGGATCAGACTC+TGG | + | chr2.4:2826615-2826634 | None:intergenic | 50.0% | |
| GTATGTGAGCATAAAGGGGG+TGG | - | chr2.4:2824259-2824278 | MS.gene89109:intron | 50.0% | |
| GTCAACAGCACCAAAGTCCA+TGG | + | chr2.4:2820474-2820493 | None:intergenic | 50.0% | |
| GTTGTTGGAGGACCTTGCTA+AGG | - | chr2.4:2820628-2820647 | MS.gene89109:CDS | 50.0% | |
| TCTTCAAGACCACCTCCGAT+CGG | - | chr2.4:2826579-2826598 | MS.gene89109:CDS | 50.0% | |
| TTCGAAGAATGGGCACGTGA+GGG | - | chr2.4:2820535-2820554 | MS.gene89109:intron | 50.0% | |
| ! | ATCGGAGGTGGTCTTGAAGA+TGG | + | chr2.4:2826579-2826598 | None:intergenic | 50.0% |
| ! | CCTCGTGAAGACAGTGTTGA+CGG | + | chr2.4:2820912-2820931 | None:intergenic | 50.0% |
| ! | GATAGGTGGTGATGCTCTCA+AGG | + | chr2.4:2826541-2826560 | None:intergenic | 50.0% |
| ! | GGTGGTCTTGAAGATGGTGT+TGG | + | chr2.4:2826573-2826592 | None:intergenic | 50.0% |
| !! | CTCGCCATCGACTCTATAGT+GGG | + | chr2.4:2824661-2824680 | None:intergenic | 50.0% |
| !! | GGAAAAGAAAGGGGGCACTA+GGG | - | chr2.4:2826309-2826328 | MS.gene89109:CDS | 50.0% |
| !! | TCATCCCAATGTTGGGTTGG+TGG | - | chr2.4:2822790-2822809 | MS.gene89109:intron | 50.0% |
| !! | TCTCGCCATCGACTCTATAG+TGG | + | chr2.4:2824662-2824681 | None:intergenic | 50.0% |
| !! | TGGAAAAGAAAGGGGGCACT+AGG | - | chr2.4:2826308-2826327 | MS.gene89109:CDS | 50.0% |
| AATGGGCACGTGAGGGCTAT+GGG | - | chr2.4:2820542-2820561 | MS.gene89109:intron | 55.0% | |
| CCGTCAACACTGTCTTCACG+AGG | - | chr2.4:2820909-2820928 | MS.gene89109:intron | 55.0% | |
| CGCGTTCCTGAAGTAGTTCC+TGG | + | chr2.4:2826627-2826646 | None:intergenic | 55.0% | |
| CTTCGAAGAATGGGCACGTG+AGG | - | chr2.4:2820534-2820553 | MS.gene89109:intron | 55.0% | |
| GGGCACGTGACTTCGAAGAA+TGG | - | chr2.4:2820524-2820543 | MS.gene89109:intron | 55.0% | |
| GTACTCGTTTGGTTGCGTGG+CGG | + | chr2.4:2822650-2822669 | None:intergenic | 55.0% | |
| TACTCGTTTGGTTGCGTGGC+GGG | + | chr2.4:2822649-2822668 | None:intergenic | 55.0% | |
| TTCGAAGTCACGTGCCCAAG+TGG | + | chr2.4:2820521-2820540 | None:intergenic | 55.0% | |
| ! | TCCTGGATCAGACTCTGGGA+CGG | + | chr2.4:2826610-2826629 | None:intergenic | 55.0% |
| ! | TCTCGATCTAGGGTGCGACA+CGG | - | chr2.4:2824567-2824586 | MS.gene89109:intron | 55.0% |
| !! | AGGGGGCACTAGGGACAAAA+TGG | - | chr2.4:2826318-2826337 | MS.gene89109:CDS | 55.0% |
| !! | CTTTGGTGCTGTTGACGTGG+CGG | - | chr2.4:2820478-2820497 | MS.gene89109:intron | 55.0% |
| !! | GGACTTTGGTGCTGTTGACG+TGG | - | chr2.4:2820475-2820494 | MS.gene89109:intron | 55.0% |
| !! | GGGGGCACTAGGGACAAAAT+GGG | - | chr2.4:2826319-2826338 | MS.gene89109:CDS | 55.0% |
| ACTCGTTTGGTTGCGTGGCG+GGG | + | chr2.4:2822648-2822667 | None:intergenic | 60.0% | |
| AGGGGCCACCAACCCAACAT+TGG | + | chr2.4:2822798-2822817 | None:intergenic | 60.0% | |
| GAATGGGCACGTGAGGGCTA+TGG | - | chr2.4:2820541-2820560 | MS.gene89109:intron | 60.0% | |
| GGGGCCACCAACCCAACATT+GGG | + | chr2.4:2822797-2822816 | None:intergenic | 60.0% | |
| ! | ATCTAGGGTGCGACACGGTG+TGG | - | chr2.4:2824572-2824591 | MS.gene89109:intron | 60.0% |
| !! | CCTGGATCAGACTCTGGGAC+GGG | + | chr2.4:2826609-2826628 | None:intergenic | 60.0% |
| !! | CTGGATCAGACTCTGGGACG+GGG | + | chr2.4:2826608-2826627 | None:intergenic | 60.0% |
| CCCGTCCCAGAGTCTGATCC+AGG | - | chr2.4:2826606-2826625 | MS.gene89109:CDS | 65.0% | |
| ! | TCTGGGACGGGGACTCCGAT+CGG | + | chr2.4:2826597-2826616 | None:intergenic | 65.0% |
| ACGGGGACTCCGATCGGAGG+TGG | + | chr2.4:2826591-2826610 | None:intergenic | 70.0% | |
| GGGACGGGGACTCCGATCGG+AGG | + | chr2.4:2826594-2826613 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 2820329 | 2826662 | 2820329 | ID=MS.gene89109 |
| chr2.4 | mRNA | 2820329 | 2826662 | 2820329 | ID=MS.gene89109.t1;Parent=MS.gene89109 |
| chr2.4 | exon | 2826267 | 2826662 | 2826267 | ID=MS.gene89109.t1.exon1;Parent=MS.gene89109.t1 |
| chr2.4 | CDS | 2826267 | 2826662 | 2826267 | ID=cds.MS.gene89109.t1;Parent=MS.gene89109.t1 |
| chr2.4 | exon | 2826061 | 2826132 | 2826061 | ID=MS.gene89109.t1.exon2;Parent=MS.gene89109.t1 |
| chr2.4 | CDS | 2826061 | 2826132 | 2826061 | ID=cds.MS.gene89109.t1;Parent=MS.gene89109.t1 |
| chr2.4 | exon | 2822192 | 2822273 | 2822192 | ID=MS.gene89109.t1.exon3;Parent=MS.gene89109.t1 |
| chr2.4 | CDS | 2822192 | 2822273 | 2822192 | ID=cds.MS.gene89109.t1;Parent=MS.gene89109.t1 |
| chr2.4 | exon | 2820566 | 2820785 | 2820566 | ID=MS.gene89109.t1.exon4;Parent=MS.gene89109.t1 |
| chr2.4 | CDS | 2820566 | 2820785 | 2820566 | ID=cds.MS.gene89109.t1;Parent=MS.gene89109.t1 |
| chr2.4 | exon | 2820329 | 2820467 | 2820329 | ID=MS.gene89109.t1.exon5;Parent=MS.gene89109.t1 |
| chr2.4 | CDS | 2820329 | 2820467 | 2820329 | ID=cds.MS.gene89109.t1;Parent=MS.gene89109.t1 |
| Gene Sequence |
| Protein sequence |
