Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057662.t1 | XP_003607208.1 | 98.9 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 6.70E-141 | 510 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057662.t1 | B7FNA9 | 98.9 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 1.6e-143 | 510.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057662.t1 | G7JNG4 | 98.9 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 4.8e-141 | 510.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054005 | MS.gene057662 | 0.804515 | 2.08E-49 | -1.69E-46 |
| MS.gene057662 | MS.gene058245 | 0.816548 | 5.23E-52 | -1.69E-46 |
| MS.gene057662 | MS.gene059802 | 0.819317 | 1.24E-52 | -1.69E-46 |
| MS.gene057662 | MS.gene06786 | 0.804892 | 1.74E-49 | -1.69E-46 |
| MS.gene057662 | MS.gene07417 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene057662 | MS.gene20548 | 0.834913 | 2.28E-56 | -1.69E-46 |
| MS.gene057662 | MS.gene35791 | 0.802506 | 5.43E-49 | -1.69E-46 |
| MS.gene057662 | MS.gene52122 | 0.801789 | 7.63E-49 | -1.69E-46 |
| MS.gene057662 | MS.gene55980 | 0.816308 | 5.91E-52 | -1.69E-46 |
| MS.gene057662 | MS.gene83589 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene057662 | MS.gene86991 | 0.844953 | 5.49E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057662.t1 | MTR_4g074480 | 98.868 | 265 | 3 | 0 | 1 | 265 | 1 | 265 | 0.0 | 523 |
| MS.gene057662.t1 | MTR_4g074480 | 98.864 | 264 | 3 | 0 | 2 | 265 | 17 | 280 | 0.0 | 521 |
| MS.gene057662.t1 | MTR_4g108000 | 96.875 | 256 | 8 | 0 | 1 | 256 | 1 | 256 | 1.01e-179 | 495 |
| MS.gene057662.t1 | MTR_4g108000 | 96.863 | 255 | 8 | 0 | 2 | 256 | 32 | 286 | 8.12e-179 | 494 |
| MS.gene057662.t1 | MTR_4g108000 | 96.863 | 255 | 8 | 0 | 2 | 256 | 17 | 271 | 8.79e-179 | 493 |
| MS.gene057662.t1 | MTR_4g108000 | 94.615 | 260 | 14 | 0 | 1 | 260 | 1 | 260 | 1.10e-177 | 495 |
| MS.gene057662.t1 | MTR_4g108000 | 96.457 | 254 | 9 | 0 | 2 | 255 | 17 | 270 | 1.20e-177 | 496 |
| MS.gene057662.t1 | MTR_4g108000 | 96.457 | 254 | 9 | 0 | 2 | 255 | 17 | 270 | 5.84e-177 | 493 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057662.t1 | AT5G18400 | 55.957 | 277 | 105 | 4 | 1 | 265 | 1 | 272 | 1.14e-88 | 264 |
| MS.gene057662.t1 | AT5G18400 | 55.957 | 277 | 105 | 4 | 1 | 265 | 1 | 272 | 1.14e-88 | 264 |
| MS.gene057662.t1 | AT5G18400 | 56.877 | 269 | 99 | 4 | 9 | 265 | 6 | 269 | 1.23e-87 | 261 |
Find 58 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGAAAACAAGTTATTAT+TGG | 0.250596 | 4.4:-34942130 | MS.gene057662:CDS |
| TTTGGTCTACAGTGTGGGTT+AGG | 0.251749 | 4.4:-34939884 | MS.gene057662:intron |
| GGGACTGCCTGCCTTCAAAA+TGG | 0.255879 | 4.4:-34939828 | MS.gene057662:CDS |
| TCCCAATCTGCTGTGGGTTC+AGG | 0.274662 | 4.4:-34942249 | MS.gene057662:CDS |
| GGAATCTTCCTCTGTGGATT+TGG | 0.313238 | 4.4:-34942373 | MS.gene057662:CDS |
| TCTTTACCAGATGGCAGTTC+AGG | 0.330853 | 4.4:+34941456 | None:intergenic |
| GAGGAGAAAGTGTTGAAGTT+AGG | 0.335111 | 4.4:-34941292 | MS.gene057662:CDS |
| ACCTGAACCCACAGCAGATT+GGG | 0.367811 | 4.4:+34942248 | None:intergenic |
| GTGGGTTAGGGGATGCGTTT+AGG | 0.373430 | 4.4:-34939871 | MS.gene057662:CDS |
| TCATAATCAATTTGCACCTT+GGG | 0.407602 | 4.4:+34941531 | None:intergenic |
| TTGGTCTACAGTGTGGGTTA+GGG | 0.418067 | 4.4:-34939883 | MS.gene057662:intron |
| GCAACAGGGGATTGTGAAAT+CGG | 0.423300 | 4.4:-34941364 | MS.gene057662:intron |
| AAGGCAGGCAGTCCCTTGTA+AGG | 0.430422 | 4.4:+34939836 | None:intergenic |
| GAAAACAAGTTATTATTGGC+AGG | 0.432138 | 4.4:-34942126 | MS.gene057662:CDS |
| TGCTGTGGGTTCAGGTGATA+AGG | 0.434752 | 4.4:-34942241 | MS.gene057662:intron |
| GTCTGCAGCAAGGAAGTTAC+CGG | 0.440596 | 4.4:+34939693 | None:intergenic |
| GTGCAGTACCTGCCCTTACA+AGG | 0.441245 | 4.4:-34939849 | MS.gene057662:CDS |
| GGTTGAGAAATTGGATCCTC+TGG | 0.453715 | 4.4:-34943265 | MS.gene057662:CDS |
| ATCATAATCAATTTGCACCT+TGG | 0.455552 | 4.4:+34941530 | None:intergenic |
| CACCTGAACCCACAGCAGAT+TGG | 0.467479 | 4.4:+34942247 | None:intergenic |
| TTTGATGCGATTAGAGAGCT+TGG | 0.471851 | 4.4:-34943297 | MS.gene057662:CDS |
| GGACTGCCTGCCTTCAAAAT+GGG | 0.476612 | 4.4:-34939827 | MS.gene057662:CDS |
| AAGAAACCTGAACTGCCATC+TGG | 0.477418 | 4.4:-34941462 | MS.gene057662:intron |
| CGAATAAGAGTTGTCCCACC+AGG | 0.491082 | 4.4:+34942279 | None:intergenic |
| TGGTCTACAGTGTGGGTTAG+GGG | 0.497622 | 4.4:-34939882 | MS.gene057662:intron |
| CAAATCCTCCCAATCTGCTG+TGG | 0.503823 | 4.4:-34942256 | MS.gene057662:CDS |
| GCATCAAACACTTGACTGAC+AGG | 0.506089 | 4.4:+34943312 | None:intergenic |
| TTGATGCGATTAGAGAGCTT+GGG | 0.506545 | 4.4:-34943296 | MS.gene057662:CDS |
| TGGTGCTGTGTTGGCATGTA+CGG | 0.526353 | 4.4:-34943349 | MS.gene057662:CDS |
| TCTTGAGTCAGTTGGTCGAT+AGG | 0.526999 | 4.4:+34942321 | None:intergenic |
| ATTAGAGAGCTTGGGAATGA+GGG | 0.528876 | 4.4:-34943288 | MS.gene057662:CDS |
| GATTAGAGAGCTTGGGAATG+AGG | 0.531987 | 4.4:-34943289 | MS.gene057662:CDS |
| ATGTGGAAGGGCAGAAGAAG+AGG | 0.536094 | 4.4:-34941311 | MS.gene057662:CDS |
| CAGGATGCTGCAAAGATGTA+TGG | 0.549895 | 4.4:-34943369 | MS.gene057662:CDS |
| AGGCAGTCCCTTGTAAGGGC+AGG | 0.558512 | 4.4:+34939841 | None:intergenic |
| TCCAGTGGAATCTTCCTCTG+TGG | 0.563111 | 4.4:-34942379 | MS.gene057662:CDS |
| TCCACAGAGGAAGATTCCAC+TGG | 0.564490 | 4.4:+34942378 | None:intergenic |
| TGCCTTCAAAATGGGCGAGA+AGG | 0.566839 | 4.4:-34939819 | MS.gene057662:intron |
| AAATCCTCCCAATCTGCTGT+GGG | 0.570159 | 4.4:-34942255 | MS.gene057662:CDS |
| GTCCTCAGTGTGTTAAAACC+TGG | 0.572273 | 4.4:-34942297 | MS.gene057662:CDS |
| TGAGGACTTCTTGAGTCAGT+TGG | 0.573047 | 4.4:+34942313 | None:intergenic |
| ACACTGCCACAAGCTGATTG+AGG | 0.579233 | 4.4:+34941244 | None:intergenic |
| TGAAATCGGACCTACAAGAA+AGG | 0.582586 | 4.4:-34941350 | MS.gene057662:CDS |
| AACTTCAGGCAAGTTTCCAG+TGG | 0.602354 | 4.4:-34942394 | MS.gene057662:intron |
| AATAATCCTCAATCAGCTTG+TGG | 0.606583 | 4.4:-34941250 | MS.gene057662:CDS |
| CTCAGTGTGTTAAAACCTGG+TGG | 0.609178 | 4.4:-34942294 | MS.gene057662:CDS |
| AAAGATGTATGGTGCTGTGT+TGG | 0.610093 | 4.4:-34943358 | MS.gene057662:CDS |
| TGAACCCACAGCAGATTGGG+AGG | 0.622299 | 4.4:+34942251 | None:intergenic |
| TGCAGTACCTGCCCTTACAA+GGG | 0.630912 | 4.4:-34939848 | MS.gene057662:CDS |
| GGTTGTGAAAAGTTCACCCA+AGG | 0.638698 | 4.4:-34941547 | MS.gene057662:CDS |
| TTAGAGAGCTTGGGAATGAG+GGG | 0.642564 | 4.4:-34943287 | MS.gene057662:CDS |
| AGGCAGGCAGTCCCTTGTAA+GGG | 0.644070 | 4.4:+34939837 | None:intergenic |
| TCTATCATATGTCTGCAGCA+AGG | 0.648889 | 4.4:+34939683 | None:intergenic |
| TAGAGAGCTTGGGAATGAGG+GGG | 0.658577 | 4.4:-34943286 | MS.gene057662:CDS |
| ACAGGCGTTACAATCTTCTG+TGG | 0.663312 | 4.4:-34942091 | MS.gene057662:intron |
| TCAGTGTGTTAAAACCTGGT+GGG | 0.663625 | 4.4:-34942293 | MS.gene057662:CDS |
| GATGCAGATGTAATAACCAG+AGG | 0.692682 | 4.4:+34943249 | None:intergenic |
| TAAAACAACCAAATCCACAG+AGG | 0.772386 | 4.4:+34942365 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTAAGAAAAAACAA+CGG | + | chr4.4:34941619-34941638 | None:intergenic | 10.0% |
| !!! | TCAAATTATTTTTTCTATAA+TGG | - | chr4.4:34943712-34943731 | MS.gene057662:intron | 10.0% |
| !! | AAAAAAACATTATAACATCA+AGG | + | chr4.4:34942752-34942771 | None:intergenic | 15.0% |
| !! | AAAATAGACAAAACTATTAA+CGG | + | chr4.4:34943666-34943685 | None:intergenic | 15.0% |
| !! | CTGCAAAAAAAAAAAAAATA+TGG | + | chr4.4:34943917-34943936 | None:intergenic | 15.0% |
| !!! | ATAATTTGAAATAGCATTAA+CGG | + | chr4.4:34943701-34943720 | None:intergenic | 15.0% |
| !!! | CATATTTTTTTTTTTTTTGC+AGG | - | chr4.4:34943915-34943934 | MS.gene057662:intron | 15.0% |
| !!! | TAAAACAAAGTTGATTTATT+TGG | - | chr4.4:34941155-34941174 | MS.gene057662:intron | 15.0% |
| !!! | TTACATGATTAATACTTTTA+AGG | + | chr4.4:34942550-34942569 | None:intergenic | 15.0% |
| !!! | TTGATGTTATAATGTTTTTT+TGG | - | chr4.4:34942751-34942770 | MS.gene057662:intron | 15.0% |
| !!! | TTGCATTAAATTTGTTTTAT+GGG | - | chr4.4:34940481-34940500 | MS.gene057662:intron | 15.0% |
| !!! | TTTGCATTAAATTTGTTTTA+TGG | - | chr4.4:34940480-34940499 | MS.gene057662:intron | 15.0% |
| !! | AAAAAATAGTCGGTAAAAAT+TGG | + | chr4.4:34941223-34941242 | None:intergenic | 20.0% |
| !! | AAATCTTAAATATGTTACCA+TGG | - | chr4.4:34942689-34942708 | MS.gene057662:intron | 20.0% |
| !! | ATAATATGCACAATAATTGA+AGG | + | chr4.4:34940439-34940458 | None:intergenic | 20.0% |
| !! | GTTAATAAGGAAAAAAAATC+TGG | + | chr4.4:34941967-34941986 | None:intergenic | 20.0% |
| !! | TATAATTAGAACTTGTAAGA+TGG | + | chr4.4:34942000-34942019 | None:intergenic | 20.0% |
| !! | TATTATGTGATGTGATATAA+TGG | - | chr4.4:34940456-34940475 | MS.gene057662:intron | 20.0% |
| !! | TCTTGAAAACAAGTTATTAT+TGG | - | chr4.4:34941510-34941529 | MS.gene057662:CDS | 20.0% |
| !!! | ATATACTTTTGATTTACATG+TGG | - | chr4.4:34943434-34943453 | MS.gene057662:intron | 20.0% |
| !!! | ATGGTAACATATTTAAGATT+TGG | + | chr4.4:34942690-34942709 | None:intergenic | 20.0% |
| !!! | CAGAGTTTGTAATTTTAAAT+AGG | - | chr4.4:34943465-34943484 | MS.gene057662:intron | 20.0% |
| !!! | TGCATTAAATTTGTTTTATG+GGG | - | chr4.4:34940482-34940501 | MS.gene057662:intron | 20.0% |
| !!! | TGTTTGTAATGATTTGATTT+CGG | - | chr4.4:34939910-34939929 | MS.gene057662:intron | 20.0% |
| !!! | TTCTATTTTCTCAGTATTAT+TGG | + | chr4.4:34940852-34940871 | None:intergenic | 20.0% |
| !!! | TTTTAATGTTTGAAGTTTGT+GGG | - | chr4.4:34940986-34941005 | MS.gene057662:intron | 20.0% |
| !!! | TTTTTGTTTAATCAATCTGT+TGG | - | chr4.4:34942432-34942451 | MS.gene057662:intron | 20.0% |
| ! | AAAACAACGGTTAATAAAGA+TGG | + | chr4.4:34941606-34941625 | None:intergenic | 25.0% |
| ! | AACCAGTTCAATTAATAGTA+TGG | - | chr4.4:34942838-34942857 | MS.gene057662:intron | 25.0% |
| ! | AACCATACTATTAATTGAAC+TGG | + | chr4.4:34942843-34942862 | None:intergenic | 25.0% |
| ! | AATAATGAAACCCTAAAAGA+TGG | + | chr4.4:34940602-34940621 | None:intergenic | 25.0% |
| ! | ATAAGGAAAAAAAATCTGGA+TGG | + | chr4.4:34941963-34941982 | None:intergenic | 25.0% |
| ! | ATAATGAAACCCTAAAAGAT+GGG | + | chr4.4:34940601-34940620 | None:intergenic | 25.0% |
| ! | ATGCTCAAATATTTACACTT+GGG | - | chr4.4:34939870-34939889 | MS.gene057662:CDS | 25.0% |
| ! | ATTTGAGCATGAAACATAAA+AGG | + | chr4.4:34939860-34939879 | None:intergenic | 25.0% |
| ! | TAAAAATTGGATGACACTAT+AGG | + | chr4.4:34942460-34942479 | None:intergenic | 25.0% |
| ! | TATTTGCAAAGAAAGTAGTT+TGG | + | chr4.4:34942954-34942973 | None:intergenic | 25.0% |
| ! | TGAAGTTTGCAAAAAATAGT+CGG | + | chr4.4:34941233-34941252 | None:intergenic | 25.0% |
| ! | TTTGAGCATGAAACATAAAA+GGG | + | chr4.4:34939859-34939878 | None:intergenic | 25.0% |
| !! | AATTCACTCTATGCATTTTT+CGG | + | chr4.4:34940650-34940669 | None:intergenic | 25.0% |
| !! | TATTTTCTGCGTTAAAATTG+TGG | - | chr4.4:34942518-34942537 | MS.gene057662:intron | 25.0% |
| !! | TTTAATGTTTGAAGTTTGTG+GGG | - | chr4.4:34940987-34941006 | MS.gene057662:intron | 25.0% |
| !!! | AATAACTTGTTTTCAAGATC+AGG | + | chr4.4:34941508-34941527 | None:intergenic | 25.0% |
| !!! | GTTTTAATGTTTGAAGTTTG+TGG | - | chr4.4:34940985-34941004 | MS.gene057662:intron | 25.0% |
| AAAAAAACCAAACACTTTGC+AGG | + | chr4.4:34940172-34940191 | None:intergenic | 30.0% | |
| AAAAAGCCTTCATGGAAAAT+TGG | - | chr4.4:34942049-34942068 | MS.gene057662:intron | 30.0% | |
| AAAACCATTAACTACAGCAA+TGG | + | chr4.4:34941826-34941845 | None:intergenic | 30.0% | |
| AAATGCTAGATACAATTCAG+TGG | + | chr4.4:34943525-34943544 | None:intergenic | 30.0% | |
| AACGGTTAATAAAGATGGTA+AGG | + | chr4.4:34941601-34941620 | None:intergenic | 30.0% | |
| AAGACAAACTTTCAGAACAA+TGG | + | chr4.4:34943738-34943757 | None:intergenic | 30.0% | |
| AAGTTGTTAACGAAAGGATT+TGG | + | chr4.4:34939716-34939735 | None:intergenic | 30.0% | |
| AATGCTAGATACAATTCAGT+GGG | + | chr4.4:34943524-34943543 | None:intergenic | 30.0% | |
| ACATAGATGTCAAGACTATT+TGG | - | chr4.4:34942656-34942675 | MS.gene057662:intron | 30.0% | |
| AGAAAATGGATGAAAAGACA+TGG | + | chr4.4:34939786-34939805 | None:intergenic | 30.0% | |
| AGTGAATTAGTGTATCCTTT+CGG | - | chr4.4:34940662-34940681 | MS.gene057662:intron | 30.0% | |
| AGTTGTTAACGAAAGGATTT+GGG | + | chr4.4:34939715-34939734 | None:intergenic | 30.0% | |
| ATATGGATAAGTTATGCAAC+AGG | + | chr4.4:34943900-34943919 | None:intergenic | 30.0% | |
| ATCATAATCAATTTGCACCT+TGG | + | chr4.4:34942113-34942132 | None:intergenic | 30.0% | |
| ATGTTGTCAATTCCAAATAG+CGG | + | chr4.4:34942640-34942659 | None:intergenic | 30.0% | |
| ATTTCATCCAACATGAATCA+AGG | + | chr4.4:34940738-34940757 | None:intergenic | 30.0% | |
| ATTTGTGGATATGAGATTGA+AGG | - | chr4.4:34940064-34940083 | MS.gene057662:intron | 30.0% | |
| CAATACTTCATCAGTTGATT+CGG | - | chr4.4:34943175-34943194 | MS.gene057662:intron | 30.0% | |
| CAATCGTTATTTATTGTCAC+AGG | - | chr4.4:34940252-34940271 | MS.gene057662:intron | 30.0% | |
| CAGAGTTTAAATTAAGCTTC+TGG | - | chr4.4:34943488-34943507 | MS.gene057662:intron | 30.0% | |
| CATGCTCAAATATTTACACT+TGG | - | chr4.4:34939869-34939888 | MS.gene057662:CDS | 30.0% | |
| GAAAACAAGTTATTATTGGC+AGG | - | chr4.4:34941514-34941533 | MS.gene057662:CDS | 30.0% | |
| GTGAATTGAGAATGAGAAAA+TGG | + | chr4.4:34939800-34939819 | None:intergenic | 30.0% | |
| TCATAATCAATTTGCACCTT+GGG | + | chr4.4:34942112-34942131 | None:intergenic | 30.0% | |
| TCGGTAAAAATTGGAATCTT+TGG | + | chr4.4:34941214-34941233 | None:intergenic | 30.0% | |
| TGCTGTTATATAGATGCTAA+TGG | - | chr4.4:34940949-34940968 | MS.gene057662:intron | 30.0% | |
| TGTTCCTTTGTCAAAATTCA+AGG | - | chr4.4:34943015-34943034 | MS.gene057662:intron | 30.0% | |
| TTGATTTACATGTGGATTCT+GGG | - | chr4.4:34943442-34943461 | MS.gene057662:intron | 30.0% | |
| TTTGTGGATATGAGATTGAA+GGG | - | chr4.4:34940065-34940084 | MS.gene057662:intron | 30.0% | |
| TTTGTTAAAAACGATGTTCC+TGG | - | chr4.4:34940028-34940047 | MS.gene057662:intron | 30.0% | |
| ! | CGGCTATTTGAACATATTTT+CGG | + | chr4.4:34942578-34942597 | None:intergenic | 30.0% |
| ! | GAACTAGATGCATTTTATCT+TGG | - | chr4.4:34941188-34941207 | MS.gene057662:intron | 30.0% |
| ! | TGGAGTTTGATAGGTAATTT+TGG | + | chr4.4:34942928-34942947 | None:intergenic | 30.0% |
| ! | TGTTTGAAGTTGTTAACGAA+AGG | + | chr4.4:34939722-34939741 | None:intergenic | 30.0% |
| ! | TTAATGTTTGAAGTTTGTGG+GGG | - | chr4.4:34940988-34941007 | MS.gene057662:intron | 30.0% |
| ! | TTCATCTTTTGCACTAAAGA+AGG | - | chr4.4:34942072-34942091 | MS.gene057662:intron | 30.0% |
| ! | TTTGATTTACATGTGGATTC+TGG | - | chr4.4:34943441-34943460 | MS.gene057662:intron | 30.0% |
| !! | AAGCTTTATTAGTCATTCTG+TGG | + | chr4.4:34943377-34943396 | None:intergenic | 30.0% |
| !! | ATGATTTGATTTCGGCATTT+TGG | - | chr4.4:34939918-34939937 | MS.gene057662:intron | 30.0% |
| !! | ATGGTTTTTCATTTTTGTGC+AGG | - | chr4.4:34941838-34941857 | MS.gene057662:intron | 30.0% |
| !! | GTTGTTTGGTGTCATTTATT+TGG | - | chr4.4:34943869-34943888 | MS.gene057662:intron | 30.0% |
| !! | TGATAGGTAATTTTGGCAAT+TGG | + | chr4.4:34942921-34942940 | None:intergenic | 30.0% |
| !! | TTGTTCTGAAAGTTTGTCTT+TGG | - | chr4.4:34943738-34943757 | MS.gene057662:intron | 30.0% |
| !!! | GACTATTTTTTGCAAACTTC+AGG | - | chr4.4:34941232-34941251 | MS.gene057662:intron | 30.0% |
| !!! | TGGATTTGGTTGTTTTAATC+TGG | - | chr4.4:34941281-34941300 | MS.gene057662:CDS | 30.0% |
| AAAAAAATCTGGATGGCTCA+TGG | + | chr4.4:34941956-34941975 | None:intergenic | 35.0% | |
| AAGATCAGGTATCATCTGAA+AGG | + | chr4.4:34941494-34941513 | None:intergenic | 35.0% | |
| AATAATCCTCAATCAGCTTG+TGG | - | chr4.4:34942390-34942409 | MS.gene057662:intron | 35.0% | |
| ACAATCAATGAAAGTTCTGC+AGG | + | chr4.4:34942998-34943017 | None:intergenic | 35.0% | |
| ACACCAAACAACTTAAGAGA+GGG | + | chr4.4:34943861-34943880 | None:intergenic | 35.0% | |
| ATATAGATGCTAATGGCTTG+TGG | - | chr4.4:34940956-34940975 | MS.gene057662:intron | 35.0% | |
| ATGCACAATAATTGAAGGAG+AGG | + | chr4.4:34940434-34940453 | None:intergenic | 35.0% | |
| ATGCCATGAATCATGATGTT+GGG | + | chr4.4:34940577-34940596 | None:intergenic | 35.0% | |
| ATGCTAGATACAATTCAGTG+GGG | + | chr4.4:34943523-34943542 | None:intergenic | 35.0% | |
| ATTGTGCAATAGAATACGCT+AGG | - | chr4.4:34941660-34941679 | MS.gene057662:intron | 35.0% | |
| CAAAAATTCCACTGAGTCAA+CGG | + | chr4.4:34943217-34943236 | None:intergenic | 35.0% | |
| CAAAAATTGCTCATGTGGAA+GGG | - | chr4.4:34942317-34942336 | MS.gene057662:CDS | 35.0% | |
| CAACTAAATTGACAGAAGCA+AGG | + | chr4.4:34943075-34943094 | None:intergenic | 35.0% | |
| CCAACATGAATCAAGGAAAA+AGG | + | chr4.4:34940731-34940750 | None:intergenic | 35.0% | |
| CTGTGGTAAGTTTCATTATC+TGG | - | chr4.4:34941566-34941585 | MS.gene057662:CDS | 35.0% | |
| CTTGCTTCTGTCAATTTAGT+TGG | - | chr4.4:34943073-34943092 | MS.gene057662:intron | 35.0% | |
| GGAAAATGGGAAATCGTATT+TGG | + | chr4.4:34941090-34941109 | None:intergenic | 35.0% | |
| GTATCATCTGAAAGGACAAT+GGG | + | chr4.4:34941486-34941505 | None:intergenic | 35.0% | |
| GTGGACATGAATCATATCAT+TGG | + | chr4.4:34942877-34942896 | None:intergenic | 35.0% | |
| GTTTGATGAAAGTCCTCAAA+GGG | - | chr4.4:34939973-34939992 | MS.gene057662:intron | 35.0% | |
| TAAAACAACCAAATCCACAG+AGG | + | chr4.4:34941278-34941297 | None:intergenic | 35.0% | |
| TAAATTGACAGAAGCAAGGA+TGG | + | chr4.4:34943071-34943090 | None:intergenic | 35.0% | |
| TATCATCTGAAAGGACAATG+GGG | + | chr4.4:34941485-34941504 | None:intergenic | 35.0% | |
| TATGCCATGAATCATGATGT+TGG | + | chr4.4:34940578-34940597 | None:intergenic | 35.0% | |
| TCAAAGCTAAAAAGCCTTCA+TGG | - | chr4.4:34942041-34942060 | MS.gene057662:intron | 35.0% | |
| TCGGAAACAACTACAACAAA+AGG | + | chr4.4:34943252-34943271 | None:intergenic | 35.0% | |
| TCTGTTTATTGTGCTCTTGT+GGG | - | chr4.4:34940114-34940133 | MS.gene057662:intron | 35.0% | |
| TGTTTGATGAAAGTCCTCAA+AGG | - | chr4.4:34939972-34939991 | MS.gene057662:intron | 35.0% | |
| TTAACCTGGAAACTTAGACA+TGG | - | chr4.4:34940791-34940810 | MS.gene057662:intron | 35.0% | |
| TTACCCAACATCATGATTCA+TGG | - | chr4.4:34940571-34940590 | MS.gene057662:intron | 35.0% | |
| TTAGGCTTACGTGTGATATT+TGG | - | chr4.4:34942236-34942255 | MS.gene057662:intron | 35.0% | |
| TTCTGTTTATTGTGCTCTTG+TGG | - | chr4.4:34940113-34940132 | MS.gene057662:intron | 35.0% | |
| TTGCAAAGAAAGTAGTTTGG+TGG | + | chr4.4:34942951-34942970 | None:intergenic | 35.0% | |
| TTGCTAGGCAACTTAATCAT+TGG | + | chr4.4:34943310-34943329 | None:intergenic | 35.0% | |
| ! | ACACCTTCAATTTGAAGTGT+AGG | - | chr4.4:34940920-34940939 | MS.gene057662:intron | 35.0% |
| ! | CCTTTTTCCTTGATTCATGT+TGG | - | chr4.4:34940728-34940747 | MS.gene057662:intron | 35.0% |
| ! | CTTGGACAGCTTTGATTAAT+GGG | - | chr4.4:34940005-34940024 | MS.gene057662:intron | 35.0% |
| ! | GATGAACCAATTTTCCATGA+AGG | + | chr4.4:34942058-34942077 | None:intergenic | 35.0% |
| ! | GCAATAGAAACACGTAGTTT+TGG | + | chr4.4:34940529-34940548 | None:intergenic | 35.0% |
| ! | TTTTCCTATTGCATGTCTAG+TGG | - | chr4.4:34941922-34941941 | MS.gene057662:intron | 35.0% |
| !! | AAAACATGTGTCGATTGACA+GGG | - | chr4.4:34941027-34941046 | MS.gene057662:intron | 35.0% |
| !! | AATTTTGGCAATTGGAGTGT+GGG | + | chr4.4:34942913-34942932 | None:intergenic | 35.0% |
| !! | ACGTCCTTGAATTTTGACAA+AGG | + | chr4.4:34943022-34943041 | None:intergenic | 35.0% |
| !! | TAATTTTGGCAATTGGAGTG+TGG | + | chr4.4:34942914-34942933 | None:intergenic | 35.0% |
| AAACTGAGATACCAGGATGT+CGG | + | chr4.4:34942598-34942617 | None:intergenic | 40.0% | |
| ACGACCATTGCTGTAGTTAA+TGG | - | chr4.4:34941819-34941838 | MS.gene057662:intron | 40.0% | |
| AGAAAATCCCAAACTCTGCA+AGG | + | chr4.4:34943641-34943660 | None:intergenic | 40.0% | |
| AGCTTGGTCAGTGAATTTCT+GGG | - | chr4.4:34943611-34943630 | MS.gene057662:intron | 40.0% | |
| AGGGTTGAATCTTTACCAGA+TGG | + | chr4.4:34942196-34942215 | None:intergenic | 40.0% | |
| ATCACACGTAAGCCTAATAG+AGG | + | chr4.4:34942233-34942252 | None:intergenic | 40.0% | |
| ATCCTGGTATCTCAGTTTCA+GGG | - | chr4.4:34942600-34942619 | MS.gene057662:intron | 40.0% | |
| ATGTCCATGTCTAAGTTTCC+AGG | + | chr4.4:34940798-34940817 | None:intergenic | 40.0% | |
| ATTAGAGAGCTTGGGAATGA+GGG | - | chr4.4:34940352-34940371 | MS.gene057662:intron | 40.0% | |
| ATTGCATGTCTAGTGGTGTA+TGG | - | chr4.4:34941929-34941948 | MS.gene057662:intron | 40.0% | |
| CAAGCAACAATATCCCTTTG+AGG | + | chr4.4:34939989-34940008 | None:intergenic | 40.0% | |
| CAGCCTACACTTCAAATTGA+AGG | + | chr4.4:34940926-34940945 | None:intergenic | 40.0% | |
| CAGCCTATTACTCAACTCAT+CGG | + | chr4.4:34941762-34941781 | None:intergenic | 40.0% | |
| CATAAAAGGGTCATCACCAA+TGG | + | chr4.4:34939846-34939865 | None:intergenic | 40.0% | |
| CGGACATCATACGACAAAAA+CGG | + | chr4.4:34940630-34940649 | None:intergenic | 40.0% | |
| CTCAAAGGGATATTGTTGCT+TGG | - | chr4.4:34939987-34940006 | MS.gene057662:intron | 40.0% | |
| GAAAATCCCAAACTCTGCAA+GGG | + | chr4.4:34943640-34943659 | None:intergenic | 40.0% | |
| GAAAGGATTTGGGAAAGAGA+TGG | + | chr4.4:34939705-34939724 | None:intergenic | 40.0% | |
| GACACCAAACAACTTAAGAG+AGG | + | chr4.4:34943862-34943881 | None:intergenic | 40.0% | |
| GAGTTGAATTGCAATCAGCT+TGG | - | chr4.4:34943595-34943614 | MS.gene057662:intron | 40.0% | |
| GATGCAGATGTAATAACCAG+AGG | + | chr4.4:34940394-34940413 | None:intergenic | 40.0% | |
| GCAAAAATTGCTCATGTGGA+AGG | - | chr4.4:34942316-34942335 | MS.gene057662:CDS | 40.0% | |
| GCTTCTGTCAATTTAGTTGG+AGG | - | chr4.4:34943076-34943095 | MS.gene057662:intron | 40.0% | |
| GGAAACTTAGACATGGACAT+TGG | - | chr4.4:34940798-34940817 | MS.gene057662:intron | 40.0% | |
| GGTATCATCTGAAAGGACAA+TGG | + | chr4.4:34941487-34941506 | None:intergenic | 40.0% | |
| TAAAAACGATGTTCCTGGTG+AGG | - | chr4.4:34940033-34940052 | MS.gene057662:intron | 40.0% | |
| TACACCACTAGACATGCAAT+AGG | + | chr4.4:34941929-34941948 | None:intergenic | 40.0% | |
| TCAAATACCAGTAGCAGACT+GGG | + | chr4.4:34941800-34941819 | None:intergenic | 40.0% | |
| TCACACGTAAGCCTAATAGA+GGG | + | chr4.4:34942232-34942251 | None:intergenic | 40.0% | |
| TCAGTGTGTTAAAACCTGGT+GGG | - | chr4.4:34941347-34941366 | MS.gene057662:CDS | 40.0% | |
| TGAAATCGGACCTACAAGAA+AGG | - | chr4.4:34942290-34942309 | MS.gene057662:CDS | 40.0% | |
| TGGTCAGAGCGATGTTAATA+AGG | + | chr4.4:34941980-34941999 | None:intergenic | 40.0% | |
| TTAGATGAGCATGCTTAACC+TGG | - | chr4.4:34940777-34940796 | MS.gene057662:intron | 40.0% | |
| TTAGTCATTCTGTGGCTCTT+TGG | + | chr4.4:34943369-34943388 | None:intergenic | 40.0% | |
| TTGATGCGATTAGAGAGCTT+GGG | - | chr4.4:34940344-34940363 | MS.gene057662:intron | 40.0% | |
| TTGCATGTCTAGTGGTGTAT+GGG | - | chr4.4:34941930-34941949 | MS.gene057662:intron | 40.0% | |
| TTGTCTTTGGTCTACAGTGT+GGG | - | chr4.4:34943751-34943770 | MS.gene057662:intron | 40.0% | |
| TTTACGATAACCCGTTCCAT+TGG | - | chr4.4:34939827-34939846 | MS.gene057662:CDS | 40.0% | |
| TTTGATGCGATTAGAGAGCT+TGG | - | chr4.4:34940343-34940362 | MS.gene057662:intron | 40.0% | |
| TTTGTCTTTGGTCTACAGTG+TGG | - | chr4.4:34943750-34943769 | MS.gene057662:intron | 40.0% | |
| ! | CAAAGAAAGTAGTTTGGTGG+TGG | + | chr4.4:34942948-34942967 | None:intergenic | 40.0% |
| ! | CATGGCATACCCATCTTTTA+GGG | - | chr4.4:34940589-34940608 | MS.gene057662:intron | 40.0% |
| ! | GAATAGAAGTATGAGTGCCA+TGG | + | chr4.4:34942709-34942728 | None:intergenic | 40.0% |
| ! | GCTTGGACAGCTTTGATTAA+TGG | - | chr4.4:34940004-34940023 | MS.gene057662:intron | 40.0% |
| ! | GGCAGGATTTTCAGAAATAC+AGG | - | chr4.4:34941531-34941550 | MS.gene057662:CDS | 40.0% |
| ! | TCATGGCATACCCATCTTTT+AGG | - | chr4.4:34940588-34940607 | MS.gene057662:intron | 40.0% |
| ! | TCCACATGAGCAATTTTTGC+AGG | + | chr4.4:34942316-34942335 | None:intergenic | 40.0% |
| ! | TCTCCCTCTCTTAAGTTGTT+TGG | - | chr4.4:34943855-34943874 | MS.gene057662:intron | 40.0% |
| ! | TGTCCGATGAGTTGAGTAAT+AGG | - | chr4.4:34941756-34941775 | MS.gene057662:intron | 40.0% |
| ! | TTTTCGCATATGCTCAAGAC+CGG | + | chr4.4:34941130-34941149 | None:intergenic | 40.0% |
| ! | TTTTTGCAGGCCTTTCTTGT+AGG | + | chr4.4:34942303-34942322 | None:intergenic | 40.0% |
| !! | AAAGATGTATGGTGCTGTGT+TGG | - | chr4.4:34940282-34940301 | MS.gene057662:intron | 40.0% |
| !! | GAAAACATGTGTCGATTGAC+AGG | - | chr4.4:34941026-34941045 | MS.gene057662:intron | 40.0% |
| !! | GAGGAGAAAGTGTTGAAGTT+AGG | - | chr4.4:34942348-34942367 | MS.gene057662:CDS | 40.0% |
| !! | GCATTTGCTGCTTCTGTTTT+CGG | + | chr4.4:34943271-34943290 | None:intergenic | 40.0% |
| !! | GGCAACTTAATCATTGGCTT+TGG | + | chr4.4:34943304-34943323 | None:intergenic | 40.0% |
| !! | TCTAGCTTTGTCCCTCTATT+AGG | - | chr4.4:34942218-34942237 | MS.gene057662:intron | 40.0% |
| !! | TTGAAGGGTGTTGTGATTGA+TGG | - | chr4.4:34940080-34940099 | MS.gene057662:intron | 40.0% |
| !!! | ATTTCGGCATTTTGGTGTTC+TGG | - | chr4.4:34939926-34939945 | MS.gene057662:intron | 40.0% |
| !!! | TTTCGGCATTTTGGTGTTCT+GGG | - | chr4.4:34939927-34939946 | MS.gene057662:intron | 40.0% |
| AAATCCTCCCAATCTGCTGT+GGG | - | chr4.4:34941385-34941404 | MS.gene057662:intron | 45.0% | |
| AACCATACGCTGCATTTGCT+AGG | + | chr4.4:34943325-34943344 | None:intergenic | 45.0% | |
| AACCCTGAAACTGAGATACC+AGG | + | chr4.4:34942605-34942624 | None:intergenic | 45.0% | |
| AACTTCAGGCAAGTTTCCAG+TGG | - | chr4.4:34941246-34941265 | MS.gene057662:CDS | 45.0% | |
| AACTTGCAACAGCTCCCAAT+AGG | + | chr4.4:34943141-34943160 | None:intergenic | 45.0% | |
| AAGAAACCTGAACTGCCATC+TGG | - | chr4.4:34942178-34942197 | MS.gene057662:intron | 45.0% | |
| AAGGGTCATCACCAATGGAA+CGG | + | chr4.4:34939841-34939860 | None:intergenic | 45.0% | |
| ACAGGCGTTACAATCTTCTG+TGG | - | chr4.4:34941549-34941568 | MS.gene057662:CDS | 45.0% | |
| AGAGGGACAAAGCTAGAGAA+GGG | + | chr4.4:34942215-34942234 | None:intergenic | 45.0% | |
| AGCTGACATGTTGTGCAACA+GGG | - | chr4.4:34942262-34942281 | MS.gene057662:CDS | 45.0% | |
| ATTGGGAGCTGTTGCAAGTT+TGG | - | chr4.4:34943141-34943160 | MS.gene057662:intron | 45.0% | |
| CAGCTTGGTCAGTGAATTTC+TGG | - | chr4.4:34943610-34943629 | MS.gene057662:intron | 45.0% | |
| CAGGATGCTGCAAAGATGTA+TGG | - | chr4.4:34940271-34940290 | MS.gene057662:intron | 45.0% | |
| CATCCTGGTATCTCAGTTTC+AGG | - | chr4.4:34942599-34942618 | MS.gene057662:intron | 45.0% | |
| CTCAGTGTGTTAAAACCTGG+TGG | - | chr4.4:34941346-34941365 | MS.gene057662:CDS | 45.0% | |
| CTTCTCACGTGCTTCCTATT+GGG | - | chr4.4:34943124-34943143 | MS.gene057662:intron | 45.0% | |
| GAATGAGGGGGTTGAGAAAT+TGG | - | chr4.4:34940366-34940385 | MS.gene057662:intron | 45.0% | |
| GATTAGAGAGCTTGGGAATG+AGG | - | chr4.4:34940351-34940370 | MS.gene057662:intron | 45.0% | |
| GATTTGGGAAAGAGATGGAG+AGG | + | chr4.4:34939700-34939719 | None:intergenic | 45.0% | |
| GCAACAGGGGATTGTGAAAT+CGG | - | chr4.4:34942276-34942295 | MS.gene057662:CDS | 45.0% | |
| GCATCAAACACTTGACTGAC+AGG | + | chr4.4:34940331-34940350 | None:intergenic | 45.0% | |
| GCCTGCAAAAATTGCTCATG+TGG | - | chr4.4:34942312-34942331 | MS.gene057662:CDS | 45.0% | |
| GGAATCTTCCTCTGTGGATT+TGG | - | chr4.4:34941267-34941286 | MS.gene057662:CDS | 45.0% | |
| GGTTGAGAAATTGGATCCTC+TGG | - | chr4.4:34940375-34940394 | MS.gene057662:intron | 45.0% | |
| GGTTGTGAAAAGTTCACCCA+AGG | - | chr4.4:34942093-34942112 | MS.gene057662:CDS | 45.0% | |
| GTCAAATACCAGTAGCAGAC+TGG | + | chr4.4:34941801-34941820 | None:intergenic | 45.0% | |
| GTCAATTCCAAATAGCGGCA+TGG | + | chr4.4:34942635-34942654 | None:intergenic | 45.0% | |
| GTCCTCAGTGTGTTAAAACC+TGG | - | chr4.4:34941343-34941362 | MS.gene057662:CDS | 45.0% | |
| TAGAGGGACAAAGCTAGAGA+AGG | + | chr4.4:34942216-34942235 | None:intergenic | 45.0% | |
| TAGCTGACATGTTGTGCAAC+AGG | - | chr4.4:34942261-34942280 | MS.gene057662:CDS | 45.0% | |
| TCTTCTCACGTGCTTCCTAT+TGG | - | chr4.4:34943123-34943142 | MS.gene057662:intron | 45.0% | |
| TCTTGAGTCAGTTGGTCGAT+AGG | + | chr4.4:34941322-34941341 | None:intergenic | 45.0% | |
| TCTTTACCAGATGGCAGTTC+AGG | + | chr4.4:34942187-34942206 | None:intergenic | 45.0% | |
| TGAGGACTTCTTGAGTCAGT+TGG | + | chr4.4:34941330-34941349 | None:intergenic | 45.0% | |
| TGGTATCTCAGTTTCAGGGT+TGG | - | chr4.4:34942604-34942623 | MS.gene057662:intron | 45.0% | |
| TGTGGGATGTTGAGTTAGAG+TGG | + | chr4.4:34942896-34942915 | None:intergenic | 45.0% | |
| TGTTCAAATAGCCGACATCC+TGG | - | chr4.4:34942584-34942603 | MS.gene057662:intron | 45.0% | |
| TTAGAGAGCTTGGGAATGAG+GGG | - | chr4.4:34940353-34940372 | MS.gene057662:intron | 45.0% | |
| TTTGGTCTACAGTGTGGGTT+AGG | - | chr4.4:34943756-34943775 | MS.gene057662:intron | 45.0% | |
| ! | ATAGAAGCACAGAAGCCGAA+AGG | + | chr4.4:34940680-34940699 | None:intergenic | 45.0% |
| ! | ATGTTTGAAGTTTGTGGGGG+TGG | - | chr4.4:34940991-34941010 | MS.gene057662:intron | 45.0% |
| ! | GATGATGCCTGCAAAGTGTT+TGG | - | chr4.4:34940162-34940181 | MS.gene057662:intron | 45.0% |
| ! | GTAACCACATGTGTCACTCT+CGG | - | chr4.4:34940888-34940907 | MS.gene057662:intron | 45.0% |
| ! | GTGGGCATGTATTTCAAGTG+TGG | - | chr4.4:34940132-34940151 | MS.gene057662:intron | 45.0% |
| ! | TACCTTCTCGCCCATTTTGA+AGG | + | chr4.4:34943826-34943845 | None:intergenic | 45.0% |
| ! | TGTTTGAAGTTTGTGGGGGT+GGG | - | chr4.4:34940992-34941011 | MS.gene057662:intron | 45.0% |
| ! | TTGGTCTACAGTGTGGGTTA+GGG | - | chr4.4:34943757-34943776 | MS.gene057662:intron | 45.0% |
| ! | TTTTTGCAGGTTGCACTGTC+CGG | - | chr4.4:34943928-34943947 | MS.gene057662:intron | 45.0% |
| !! | CACCAGGTTTTAACACACTG+AGG | + | chr4.4:34941348-34941367 | None:intergenic | 45.0% |
| !! | GTTTGGTGGTGGAGTTTGAT+AGG | + | chr4.4:34942937-34942956 | None:intergenic | 45.0% |
| !! | ATAATGATTTAATTAAAAAT+TGG | + | chr4.4:34942473-34942492 | None:intergenic | 5.0% |
| ACACTGCCACAAGCTGATTG+AGG | + | chr4.4:34942399-34942418 | None:intergenic | 50.0% | |
| ACCTGAACCCACAGCAGATT+GGG | + | chr4.4:34941395-34941414 | None:intergenic | 50.0% | |
| AGCACTGCACATGCGGAAAA+TGG | + | chr4.4:34941104-34941123 | None:intergenic | 50.0% | |
| AGGGTCATCACCAATGGAAC+GGG | + | chr4.4:34939840-34939859 | None:intergenic | 50.0% | |
| ATGTGGAAGGGCAGAAGAAG+AGG | - | chr4.4:34942329-34942348 | MS.gene057662:CDS | 50.0% | |
| CAAATCACTTGTGCCTCACC+AGG | + | chr4.4:34940049-34940068 | None:intergenic | 50.0% | |
| CAAATCCTCCCAATCTGCTG+TGG | - | chr4.4:34941384-34941403 | MS.gene057662:intron | 50.0% | |
| CGAATAAGAGTTGTCCCACC+AGG | + | chr4.4:34941364-34941383 | None:intergenic | 50.0% | |
| GCACTGCACATGCGGAAAAT+GGG | + | chr4.4:34941103-34941122 | None:intergenic | 50.0% | |
| GCTGACATGTTGTGCAACAG+GGG | - | chr4.4:34942263-34942282 | MS.gene057662:CDS | 50.0% | |
| GGACTGCCTGCCTTCAAAAT+GGG | - | chr4.4:34943813-34943832 | MS.gene057662:intron | 50.0% | |
| GGGATTCCCTTGCAGAGTTT+GGG | - | chr4.4:34943631-34943650 | MS.gene057662:intron | 50.0% | |
| GGTGAGGCACAAGTGATTTG+TGG | - | chr4.4:34940049-34940068 | MS.gene057662:intron | 50.0% | |
| GTCTGCAGCAAGGAAGTTAC+CGG | + | chr4.4:34943950-34943969 | None:intergenic | 50.0% | |
| TAGAGAGCTTGGGAATGAGG+GGG | - | chr4.4:34940354-34940373 | MS.gene057662:intron | 50.0% | |
| TCCACAGAGGAAGATTCCAC+TGG | + | chr4.4:34941265-34941284 | None:intergenic | 50.0% | |
| TCCAGTGGAATCTTCCTCTG+TGG | - | chr4.4:34941261-34941280 | MS.gene057662:CDS | 50.0% | |
| TGCAGTACCTGCCCTTACAA+GGG | - | chr4.4:34943792-34943811 | MS.gene057662:intron | 50.0% | |
| TGCCTAGCAAATGCAGCGTA+TGG | - | chr4.4:34943320-34943339 | MS.gene057662:CDS | 50.0% | |
| TGCCTTCAAAATGGGCGAGA+AGG | - | chr4.4:34943821-34943840 | MS.gene057662:intron | 50.0% | |
| TGCTGTGGGTTCAGGTGATA+AGG | - | chr4.4:34941399-34941418 | MS.gene057662:intron | 50.0% | |
| TGGGATTCCCTTGCAGAGTT+TGG | - | chr4.4:34943630-34943649 | MS.gene057662:intron | 50.0% | |
| !! | TGGTCTACAGTGTGGGTTAG+GGG | - | chr4.4:34943758-34943777 | MS.gene057662:intron | 50.0% |
| !! | TGGTGCTGTGTTGGCATGTA+CGG | - | chr4.4:34940291-34940310 | MS.gene057662:intron | 50.0% |
| !! | TGTGTCGATTGACAGGGTCT+TGG | - | chr4.4:34941033-34941052 | MS.gene057662:intron | 50.0% |
| !! | TTCTCGCCCATTTTGAAGGC+AGG | + | chr4.4:34943822-34943841 | None:intergenic | 50.0% |
| AAGGCAGGCAGTCCCTTGTA+AGG | + | chr4.4:34943807-34943826 | None:intergenic | 55.0% | |
| AGGCAGGCAGTCCCTTGTAA+GGG | + | chr4.4:34943806-34943825 | None:intergenic | 55.0% | |
| CACCTGAACCCACAGCAGAT+TGG | + | chr4.4:34941396-34941415 | None:intergenic | 55.0% | |
| CTTGAAGCCCAGTCTGCTAC+TGG | - | chr4.4:34941790-34941809 | MS.gene057662:intron | 55.0% | |
| GACAGGGTCTTGGCAGAAGT+TGG | - | chr4.4:34941043-34941062 | MS.gene057662:intron | 55.0% | |
| GGACTCTCCATGCCGCTATT+TGG | - | chr4.4:34942625-34942644 | MS.gene057662:intron | 55.0% | |
| GGGACTGCCTGCCTTCAAAA+TGG | - | chr4.4:34943812-34943831 | MS.gene057662:intron | 55.0% | |
| GTGCAGTACCTGCCCTTACA+AGG | - | chr4.4:34943791-34943810 | MS.gene057662:intron | 55.0% | |
| GTGTCCGAGAGTGACACATG+TGG | + | chr4.4:34940895-34940914 | None:intergenic | 55.0% | |
| TCCCAATCTGCTGTGGGTTC+AGG | - | chr4.4:34941391-34941410 | MS.gene057662:intron | 55.0% | |
| TGAACCCACAGCAGATTGGG+AGG | + | chr4.4:34941392-34941411 | None:intergenic | 55.0% | |
| TGAAGTTTGTGGGGGTGGGT+GGG | - | chr4.4:34940996-34941015 | MS.gene057662:intron | 55.0% | |
| TTGAAGTTTGTGGGGGTGGG+TGG | - | chr4.4:34940995-34941014 | MS.gene057662:intron | 55.0% | |
| !! | ATTCGCTGCCGTTGACTCAG+TGG | - | chr4.4:34943206-34943225 | MS.gene057662:intron | 55.0% |
| !! | GTGGGTTAGGGGATGCGTTT+AGG | - | chr4.4:34943769-34943788 | MS.gene057662:intron | 55.0% |
| AGGCAGTCCCTTGTAAGGGC+AGG | + | chr4.4:34943802-34943821 | None:intergenic | 60.0% | |
| CCGGAGTAGCACTGCACATG+CGG | + | chr4.4:34941111-34941130 | None:intergenic | 60.0% | |
| ! | CCGCATGTGCAGTGCTACTC+CGG | - | chr4.4:34941108-34941127 | MS.gene057662:intron | 60.0% |
| AGTTTGTGGGGGTGGGTGGG+TGG | - | chr4.4:34940999-34941018 | MS.gene057662:intron | 65.0% | |
| GTTTGTGGGGGTGGGTGGGT+GGG | - | chr4.4:34941000-34941019 | MS.gene057662:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 34939687 | 34943975 | 34939687 | ID=MS.gene057662 |
| chr4.4 | mRNA | 34939687 | 34943975 | 34939687 | ID=MS.gene057662.t1;Parent=MS.gene057662 |
| chr4.4 | exon | 34943973 | 34943975 | 34943973 | ID=MS.gene057662.t1.exon1;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34943973 | 34943975 | 34943973 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34943241 | 34943388 | 34943241 | ID=MS.gene057662.t1.exon2;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34943241 | 34943388 | 34943241 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34942242 | 34942408 | 34942242 | ID=MS.gene057662.t1.exon3;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34942242 | 34942408 | 34942242 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34942092 | 34942163 | 34942092 | ID=MS.gene057662.t1.exon4;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34942092 | 34942163 | 34942092 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34941463 | 34941622 | 34941463 | ID=MS.gene057662.t1.exon5;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34941463 | 34941622 | 34941463 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34941246 | 34941379 | 34941246 | ID=MS.gene057662.t1.exon6;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34941246 | 34941379 | 34941246 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34939820 | 34939894 | 34939820 | ID=MS.gene057662.t1.exon7;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34939820 | 34939894 | 34939820 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| chr4.4 | exon | 34939687 | 34939725 | 34939687 | ID=MS.gene057662.t1.exon8;Parent=MS.gene057662.t1 |
| chr4.4 | CDS | 34939687 | 34939725 | 34939687 | ID=cds.MS.gene057662.t1;Parent=MS.gene057662.t1 |
| Gene Sequence |
| Protein sequence |
