Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058388.t1 | XP_003628198.2 | 91.6 | 499 | 38 | 2 | 1 | 495 | 1 | 499 | 1.20E-263 | 918.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058388.t1 | Q5E915 | 68.9 | 479 | 142 | 4 | 7 | 483 | 7 | 480 | 6.0e-192 | 671.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058388.t1 | G7L7T3 | 91.6 | 499 | 38 | 2 | 1 | 495 | 1 | 499 | 8.4e-264 | 918.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene058388 | MS.gene90863 | PPI |
| MS.gene058388 | MS.gene056221 | PPI |
| MS.gene058388 | MS.gene75146 | PPI |
| MS.gene024821 | MS.gene058388 | PPI |
| MS.gene60096 | MS.gene058388 | PPI |
| MS.gene058388 | MS.gene037409 | PPI |
| MS.gene016615 | MS.gene058388 | PPI |
| MS.gene058388 | MS.gene88509 | PPI |
| MS.gene058388 | MS.gene058069 | PPI |
| MS.gene058388 | MS.gene40494 | PPI |
| MS.gene058388 | MS.gene21793 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058388.t1 | MTR_8g045463 | 91.583 | 499 | 38 | 2 | 1 | 495 | 1 | 499 | 0.0 | 902 |
| MS.gene058388.t1 | MTR_8g045470 | 91.583 | 499 | 38 | 2 | 1 | 495 | 1 | 499 | 0.0 | 902 |
| MS.gene058388.t1 | MTR_8g045440 | 91.446 | 491 | 40 | 1 | 7 | 495 | 7 | 497 | 0.0 | 889 |
| MS.gene058388.t1 | MTR_8g041740 | 89.613 | 491 | 49 | 1 | 7 | 495 | 7 | 497 | 0.0 | 877 |
| MS.gene058388.t1 | MTR_8g045440 | 93.182 | 396 | 25 | 1 | 7 | 400 | 7 | 402 | 0.0 | 726 |
| MS.gene058388.t1 | MTR_5g069620 | 70.930 | 86 | 25 | 0 | 38 | 123 | 8 | 93 | 8.70e-35 | 125 |
| MS.gene058388.t1 | MTR_7g086360 | 23.810 | 336 | 198 | 12 | 29 | 360 | 61 | 342 | 8.37e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058388.t1 | AT3G21060 | 69.023 | 481 | 142 | 4 | 7 | 485 | 7 | 482 | 0.0 | 654 |
| MS.gene058388.t1 | AT2G43770 | 23.145 | 337 | 199 | 13 | 29 | 360 | 59 | 340 | 1.40e-13 | 72.4 |
Find 126 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGTGGCATAGTTTATATC+TGG | 0.203041 | 3.2:-2768654 | MS.gene058388:CDS |
| ATGATGGAAGCTGTGTTATT+TGG | 0.213605 | 3.2:-2769587 | MS.gene058388:CDS |
| GCTACCACTTCTTCCGAAAA+TGG | 0.216044 | 3.2:+2768233 | None:intergenic |
| TTCATATCCTTGCAGGAAAA+AGG | 0.286363 | 3.2:-2768446 | MS.gene058388:intron |
| CTCTCCGTCACCACTGAAAC+AGG | 0.298006 | 3.2:+2768828 | None:intergenic |
| GATGCCATGCCAAATCAATT+AGG | 0.300801 | 3.2:+2768707 | None:intergenic |
| CCAGTTCTCAATGTACTCTT+TGG | 0.342536 | 3.2:+2768630 | None:intergenic |
| TCCTCAATCTCTATGAAATC+AGG | 0.356314 | 3.2:+2768595 | None:intergenic |
| TAGATAGTTCTTCAAAGATT+GGG | 0.362040 | 3.2:-2768277 | MS.gene058388:CDS |
| CGTCGTGGTACCCTTCTTGC+TGG | 0.363760 | 3.2:-2772072 | MS.gene058388:intron |
| AAGAACCTCGGTGATCTAAA+TGG | 0.368839 | 3.2:-2768940 | MS.gene058388:CDS |
| AGAAGTGATAGAAGAGTATC+TGG | 0.372541 | 3.2:-2772127 | MS.gene058388:CDS |
| AGATACTCTTCTATCACTTC+TGG | 0.373017 | 3.2:+2772129 | None:intergenic |
| TTTACTAGCTCGTCTTCATC+CGG | 0.374685 | 3.2:-2769382 | MS.gene058388:CDS |
| TAAGGAAGCCCTAATTGATT+TGG | 0.374972 | 3.2:-2768716 | MS.gene058388:CDS |
| TGATGGAAGCTGTGTTATTT+GGG | 0.380302 | 3.2:-2769586 | MS.gene058388:CDS |
| ACCCTTTGACCAACAAATAC+TGG | 0.382685 | 3.2:+2769503 | None:intergenic |
| AGTGCTCTAACTTCATCTTT+TGG | 0.386517 | 3.2:+2768976 | None:intergenic |
| GAACACTTGTTGCGTGAGGC+AGG | 0.391215 | 3.2:+2769240 | None:intergenic |
| CTCCCATTACCAGTATTTGT+TGG | 0.394408 | 3.2:-2769512 | MS.gene058388:CDS |
| TTAGATAGTTCTTCAAAGAT+TGG | 0.397157 | 3.2:-2768278 | MS.gene058388:CDS |
| GGCGTGACATTACCTTCAAC+TGG | 0.399826 | 3.2:+2768179 | None:intergenic |
| AACAACCTGTCATCCTGTTC+AGG | 0.401836 | 3.2:+2768299 | None:intergenic |
| ACCAGTATTTGTTGGTCAAA+GGG | 0.407944 | 3.2:-2769504 | MS.gene058388:CDS |
| AAAGAAACAGACAAAACAAT+TGG | 0.410343 | 3.2:+2768676 | None:intergenic |
| TTGCGTGAGGCAGGGCCACT+TGG | 0.410369 | 3.2:+2769249 | None:intergenic |
| CATTCCCGATGTTCCTGAAC+AGG | 0.412421 | 3.2:-2768312 | MS.gene058388:CDS |
| CACCAAGCAGAAAGATGGTT+TGG | 0.414247 | 3.2:+2769353 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.418717 | 3.2:+2768728 | None:intergenic |
| CTCCAAACCATCTTTCTGCT+TGG | 0.422817 | 3.2:-2769355 | MS.gene058388:CDS |
| GACCAACAAATACTGGTAAT+GGG | 0.423412 | 3.2:+2769510 | None:intergenic |
| TGACCAACAAATACTGGTAA+TGG | 0.426028 | 3.2:+2769509 | None:intergenic |
| ATGCCATGCCAAATCAATTA+GGG | 0.432284 | 3.2:+2768708 | None:intergenic |
| TCCTGATTTCATAGAGATTG+AGG | 0.436594 | 3.2:-2768596 | MS.gene058388:CDS |
| ACATCGGGAATGGGAGATAC+TGG | 0.437003 | 3.2:+2768323 | None:intergenic |
| ACTCAAATGATCGAGTAATC+AGG | 0.437638 | 3.2:-2769020 | MS.gene058388:CDS |
| ACTACTGAACCACCAGAGAT+AGG | 0.439225 | 3.2:+2769087 | None:intergenic |
| CTTGTAATTGACGGTAAAGA+AGG | 0.440094 | 3.2:-2769129 | MS.gene058388:CDS |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 3.2:-2768578 | MS.gene058388:CDS |
| TTACTAGCTCGTCTTCATCC+GGG | 0.444533 | 3.2:-2769381 | MS.gene058388:CDS |
| GGGATGTCTTGAGTGGTAAA+AGG | 0.450323 | 3.2:-2769434 | MS.gene058388:CDS |
| CATAGAGATTGAGGAAAATG+AGG | 0.453993 | 3.2:-2768587 | MS.gene058388:CDS |
| GGAGAAATTCTTGTAATTGA+CGG | 0.457552 | 3.2:-2769138 | MS.gene058388:CDS |
| GATGAAGACGAGCTAGTAAA+GGG | 0.459913 | 3.2:+2769385 | None:intergenic |
| TACCAGTATTTGTTGGTCAA+AGG | 0.467812 | 3.2:-2769505 | MS.gene058388:CDS |
| CTGTTCAGGAACATCGGGAA+TGG | 0.471322 | 3.2:+2768313 | None:intergenic |
| CGTGCCATGATTCCTATCTC+TGG | 0.474702 | 3.2:-2769099 | MS.gene058388:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 3.2:-2768777 | MS.gene058388:CDS |
| TCGGAAGAAGTGGTAGCAAA+TGG | 0.478453 | 3.2:-2768227 | MS.gene058388:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 3.2:-2769603 | MS.gene058388:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 3.2:-2768742 | MS.gene058388:CDS |
| CCAAAGAGTACATTGAGAAC+TGG | 0.483830 | 3.2:-2768630 | MS.gene058388:CDS |
| GACAAAACAATTGGACGTAC+AGG | 0.485663 | 3.2:+2768685 | None:intergenic |
| GTATGGAAACCTGGTTTATG+TGG | 0.490370 | 3.2:-2769172 | MS.gene058388:CDS |
| GAGTGGCATAGTTTATATCT+GGG | 0.492751 | 3.2:-2768653 | MS.gene058388:CDS |
| TCATCCTGTTCAGGAACATC+GGG | 0.498010 | 3.2:+2768308 | None:intergenic |
| AAATCAATTAGGGCTTCCTT+AGG | 0.499377 | 3.2:+2768718 | None:intergenic |
| ATTTACATATGGGATAGAAC+TGG | 0.499480 | 3.2:-2768766 | MS.gene058388:CDS |
| TGTTCAGGAACATCGGGAAT+GGG | 0.501740 | 3.2:+2768314 | None:intergenic |
| TCACATACATTATCAGTGTC+AGG | 0.503744 | 3.2:+2768529 | None:intergenic |
| GTCAACAATCATCGGAGTAC+AGG | 0.505887 | 3.2:+2769320 | None:intergenic |
| GTTTCAGTGGTGACGGAGAG+TGG | 0.513437 | 3.2:-2768825 | MS.gene058388:CDS |
| GGATGAAGACGAGCTAGTAA+AGG | 0.525546 | 3.2:+2769384 | None:intergenic |
| ATATCAGAGTCGCAGAAAGC+AGG | 0.527495 | 3.2:+2768371 | None:intergenic |
| AGTGATTTATACCAGCAAGA+AGG | 0.536192 | 3.2:+2772061 | None:intergenic |
| GTGATTTATACCAGCAAGAA+GGG | 0.536443 | 3.2:+2772062 | None:intergenic |
| CATGCCTCAAGTCCAGTTGA+AGG | 0.538226 | 3.2:-2768191 | MS.gene058388:CDS |
| GTCATCCTGTTCAGGAACAT+CGG | 0.540330 | 3.2:+2768307 | None:intergenic |
| GGTGACGGAGAGTGGGTAGT+TGG | 0.550510 | 3.2:-2768817 | MS.gene058388:CDS |
| AACACTTGTTGCGTGAGGCA+GGG | 0.550720 | 3.2:+2769241 | None:intergenic |
| AGATAGTTCTTCAAAGATTG+GGG | 0.551314 | 3.2:-2768276 | MS.gene058388:CDS |
| ACCACCAGAGATAGGAATCA+TGG | 0.555215 | 3.2:+2769095 | None:intergenic |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 3.2:-2768776 | MS.gene058388:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 3.2:-2768734 | MS.gene058388:CDS |
| ATGTTCCTGAACAGGATGAC+AGG | 0.559029 | 3.2:-2768304 | MS.gene058388:CDS |
| ATTACCTTCAACTGGACTTG+AGG | 0.561076 | 3.2:+2768187 | None:intergenic |
| TGACACACCAAGCAGAAAGA+TGG | 0.562016 | 3.2:+2769348 | None:intergenic |
| AAGCCCTAATTGATTTGGCA+TGG | 0.564527 | 3.2:-2768711 | MS.gene058388:CDS |
| TACTAGCTCGTCTTCATCCG+GGG | 0.567258 | 3.2:-2769380 | MS.gene058388:CDS |
| ATGCAATCACGAAAGTCCAC+TGG | 0.567747 | 3.2:-2768858 | MS.gene058388:CDS |
| TAGAAGAGTATCTGGAACAT+GGG | 0.568459 | 3.2:-2772119 | MS.gene058388:CDS |
| GTGTTTAAGTCAACAATCAT+CGG | 0.569428 | 3.2:+2769312 | None:intergenic |
| TGACATTATAACAGTCAAGA+AGG | 0.574530 | 3.2:-2768396 | MS.gene058388:CDS |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 3.2:-2768260 | MS.gene058388:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 3.2:-2768838 | MS.gene058388:CDS |
| GACGGAGAGTGGGTAGTTGG+TGG | 0.584498 | 3.2:-2768814 | MS.gene058388:CDS |
| TCACGCAACAAGTGTTCCGA+TGG | 0.585083 | 3.2:-2769234 | MS.gene058388:CDS |
| CAAGCAGAAAGATGGTTTGG+AGG | 0.587501 | 3.2:+2769356 | None:intergenic |
| TCGAGTTTCCCACATAAACC+AGG | 0.588345 | 3.2:+2769163 | None:intergenic |
| AAATGGTGTTGAGAAGTTGA+AGG | 0.591187 | 3.2:-2768923 | MS.gene058388:CDS |
| ATCTGATGTCAATGAAGATG+AGG | 0.592161 | 3.2:-2768423 | MS.gene058388:CDS |
| CATGTTGAAGATCCGTTGCA+AGG | 0.592417 | 3.2:-2772159 | MS.gene058388:CDS |
| TGAAACAGGGTGCCTTCCAG+TGG | 0.594555 | 3.2:+2768842 | None:intergenic |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 3.2:+2769195 | None:intergenic |
| TGTGAAGGAGGTACTTCCAT+CGG | 0.597071 | 3.2:+2769218 | None:intergenic |
| TAGATAACATAGCTCTTCCT+CGG | 0.597086 | 3.2:+2768346 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+CGG | 0.597631 | 3.2:-2768832 | MS.gene058388:CDS |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 3.2:-2768741 | MS.gene058388:CDS |
| TTTCAGTGGTGACGGAGAGT+GGG | 0.603830 | 3.2:-2768824 | MS.gene058388:CDS |
| ATCGGAACACTTGTTGCGTG+AGG | 0.604294 | 3.2:+2769236 | None:intergenic |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 3.2:+2769203 | None:intergenic |
| TATGGAAACCTGGTTTATGT+GGG | 0.609917 | 3.2:-2769171 | MS.gene058388:CDS |
| GCCATGATTCCTATCTCTGG+TGG | 0.613251 | 3.2:-2769096 | MS.gene058388:CDS |
| ATAGAAGAGTATCTGGAACA+TGG | 0.613537 | 3.2:-2772120 | MS.gene058388:CDS |
| TACCACTCAAGACATCCCAC+AGG | 0.615382 | 3.2:+2769439 | None:intergenic |
| GTTTATGTGGGAAACTCGAA+AGG | 0.626649 | 3.2:-2769159 | MS.gene058388:CDS |
| AGACAAGTCATTATCCCTGT+GGG | 0.631106 | 3.2:-2769454 | MS.gene058388:CDS |
| GTTGGTGGTTCTGCTAGCAA+AGG | 0.631349 | 3.2:-2768799 | MS.gene058388:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 3.2:+2768872 | None:intergenic |
| AGTATTTGTTGGTCAAAGGG+TGG | 0.636013 | 3.2:-2769501 | MS.gene058388:CDS |
| TGCGTTGCTTTCAATCGTCG+TGG | 0.636138 | 3.2:-2772087 | MS.gene058388:CDS |
| TCTGGAAAATCACCTTGCAA+CGG | 0.637632 | 3.2:+2772147 | None:intergenic |
| TCTCCGTCACCACTGAAACA+GGG | 0.644525 | 3.2:+2768829 | None:intergenic |
| AAAGATGGTTTGGAGGACCC+CGG | 0.656183 | 3.2:+2769363 | None:intergenic |
| CTGCGACTCTGATATGTCCG+AGG | 0.656990 | 3.2:-2768363 | MS.gene058388:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 3.2:+2769206 | None:intergenic |
| CAGACAAGTCATTATCCCTG+TGG | 0.668536 | 3.2:-2769455 | MS.gene058388:CDS |
| ACCACTCAAGACATCCCACA+GGG | 0.671936 | 3.2:+2769440 | None:intergenic |
| TCTGTCTCTGAGAAACCAAG+TGG | 0.675976 | 3.2:-2769264 | MS.gene058388:CDS |
| GTTGAGAAGTTGAAGGCTGT+AGG | 0.680893 | 3.2:-2768916 | MS.gene058388:CDS |
| AATTGACGGTAAAGAAGGCG+AGG | 0.680914 | 3.2:-2769124 | MS.gene058388:CDS |
| AATCACGAAAGTCCACTGGA+AGG | 0.696578 | 3.2:-2768854 | MS.gene058388:CDS |
| TCCCTGTGGGATGTCTTGAG+TGG | 0.699580 | 3.2:-2769441 | MS.gene058388:CDS |
| ATGAAGACGAGCTAGTAAAG+GGG | 0.710400 | 3.2:+2769386 | None:intergenic |
| GTTGAACTGAACAAGAACCT+CGG | 0.715288 | 3.2:-2768952 | MS.gene058388:CDS |
| CAACACCATTTAGATCACCG+AGG | 0.738329 | 3.2:+2768935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATTTATGTAAAATTTAAA+GGG | - | chr3.2:2768728-2768747 | MS.gene058388:CDS | 10.0% |
| !! | TATCCAATAAAAATAATATT+TGG | + | chr3.2:2768489-2768508 | None:intergenic | 10.0% |
| !! | TGTATTTATGTAAAATTTAA+AGG | - | chr3.2:2768727-2768746 | MS.gene058388:CDS | 10.0% |
| !!! | AGATTTGATTTTTTATTTTA+GGG | - | chr3.2:2768412-2768431 | MS.gene058388:CDS | 10.0% |
| !!! | TAGATTTGATTTTTTATTTT+AGG | - | chr3.2:2768411-2768430 | MS.gene058388:CDS | 10.0% |
| !! | TTATAAAGTAAATAAGCTTT+AGG | + | chr3.2:2769447-2769466 | None:intergenic | 15.0% |
| !!! | ATCTACATTTTATTTTAAAC+CGG | + | chr3.2:2768396-2768415 | None:intergenic | 15.0% |
| !!! | TAAATTCTAGCATTTTAATT+TGG | - | chr3.2:2769076-2769095 | MS.gene058388:CDS | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+CGG | + | chr3.2:2769590-2769609 | None:intergenic | 15.0% |
| !!! | TAGCCAAATATTATTTTTAT+TGG | - | chr3.2:2768483-2768502 | MS.gene058388:intron | 15.0% |
| !!! | TTCTTTTCTTTTCAATTTTA+TGG | - | chr3.2:2771848-2771867 | MS.gene058388:intron | 15.0% |
| !! | AATTTGAGAAAATTATGTGT+CGG | - | chr3.2:2769595-2769614 | MS.gene058388:CDS | 20.0% |
| !! | TAAAATTACAAGGTTATTTG+AGG | - | chr3.2:2768603-2768622 | MS.gene058388:CDS | 20.0% |
| !! | TAAATCTATACCATCATTAA+TGG | + | chr3.2:2770219-2770238 | None:intergenic | 20.0% |
| !! | TCATTAAAAGATTAGAAGAA+TGG | + | chr3.2:2770267-2770286 | None:intergenic | 20.0% |
| !! | TTTCAAACCAACATAAAAAA+TGG | + | chr3.2:2768635-2768654 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTTTCCTTGT+GGG | - | chr3.2:2770488-2770507 | MS.gene058388:intron | 20.0% |
| !!! | AGTATACTCAGAAAATTTTA+CGG | + | chr3.2:2770471-2770490 | None:intergenic | 20.0% |
| !!! | ATTCTTCTAATCTTTTAATG+AGG | - | chr3.2:2770266-2770285 | MS.gene058388:intron | 20.0% |
| !!! | GTGTGTTTTCTATTTTATTT+CGG | - | chr3.2:2768560-2768579 | MS.gene058388:CDS | 20.0% |
| !!! | TACTTTATTTATTTTCCTTG+TGG | - | chr3.2:2770487-2770506 | MS.gene058388:intron | 20.0% |
| !!! | TAGTTTTCTGTATTGATATT+CGG | - | chr3.2:2769949-2769968 | MS.gene058388:intron | 20.0% |
| !!! | TGTGTTTTCTATTTTATTTC+GGG | - | chr3.2:2768561-2768580 | MS.gene058388:CDS | 20.0% |
| !!! | TTCTTCTAATCTTTTAATGA+GGG | - | chr3.2:2770267-2770286 | MS.gene058388:intron | 20.0% |
| !!! | TTTTATGAATTATTCACTCA+AGG | - | chr3.2:2770653-2770672 | MS.gene058388:intron | 20.0% |
| ! | AAAATACCATTGTGAATAGT+TGG | - | chr3.2:2768675-2768694 | MS.gene058388:CDS | 25.0% |
| ! | AAAGAAACAGACAAAACAAT+TGG | + | chr3.2:2771655-2771674 | None:intergenic | 25.0% |
| ! | AATTATAGCCATAACTACAA+GGG | + | chr3.2:2769854-2769873 | None:intergenic | 25.0% |
| ! | AATTGATAAATTGAATCAGC+TGG | - | chr3.2:2770713-2770732 | MS.gene058388:intron | 25.0% |
| ! | ATGAAGAATCCAAAATTACA+TGG | - | chr3.2:2768520-2768539 | MS.gene058388:intron | 25.0% |
| ! | ATTGTATATGTAAGATCGAT+TGG | - | chr3.2:2769776-2769795 | MS.gene058388:intron | 25.0% |
| ! | CAATTCATTTGTAATGCAAT+GGG | - | chr3.2:2770049-2770068 | MS.gene058388:intron | 25.0% |
| ! | GGTAATTAAATGAAGAGATT+TGG | - | chr3.2:2770150-2770169 | MS.gene058388:intron | 25.0% |
| ! | TAATGTATGTGAACGTTATA+TGG | - | chr3.2:2771810-2771829 | MS.gene058388:intron | 25.0% |
| ! | TAGATAGTTCTTCAAAGATT+GGG | - | chr3.2:2772051-2772070 | MS.gene058388:intron | 25.0% |
| ! | TCCATAGCAATATAAAACAT+TGG | + | chr3.2:2768359-2768378 | None:intergenic | 25.0% |
| ! | TCTATATCACATTGATACTA+GGG | - | chr3.2:2769972-2769991 | MS.gene058388:intron | 25.0% |
| ! | TGAAGAATCCAAAATTACAT+GGG | - | chr3.2:2768521-2768540 | MS.gene058388:intron | 25.0% |
| ! | TTAGATAGTTCTTCAAAGAT+TGG | - | chr3.2:2772050-2772069 | MS.gene058388:intron | 25.0% |
| !! | ACCAATGTTTTATATTGCTA+TGG | - | chr3.2:2768355-2768374 | MS.gene058388:CDS | 25.0% |
| !! | CCTAACATTTTTCCTAATTA+GGG | + | chr3.2:2769805-2769824 | None:intergenic | 25.0% |
| !! | TCCTAACATTTTTCCTAATT+AGG | + | chr3.2:2769806-2769825 | None:intergenic | 25.0% |
| !! | TTGCTATTGATATGATAGTA+TGG | - | chr3.2:2770099-2770118 | MS.gene058388:intron | 25.0% |
| !! | TTTAAAATAAAGGCAGACTT+TGG | - | chr3.2:2768859-2768878 | MS.gene058388:CDS | 25.0% |
| !!! | AAAGATATTGATTCTGTCAA+TGG | - | chr3.2:2770129-2770148 | MS.gene058388:intron | 25.0% |
| !!! | GTATTAGCCATTTTTTATGT+TGG | - | chr3.2:2768625-2768644 | MS.gene058388:CDS | 25.0% |
| !!! | GTGTTTTCTATTTTATTTCG+GGG | - | chr3.2:2768562-2768581 | MS.gene058388:CDS | 25.0% |
| !!! | TGTTTTCTATTTTATTTCGG+GGG | - | chr3.2:2768563-2768582 | MS.gene058388:CDS | 25.0% |
| !!! | TTCATTAAACTTTGAAGTAG+TGG | - | chr3.2:2769716-2769735 | MS.gene058388:intron | 25.0% |
| !!! | TTTATTTTAAACCGGATTTG+CGG | + | chr3.2:2768388-2768407 | None:intergenic | 25.0% |
| AAGCATAAGCGTAAATGTTA+AGG | + | chr3.2:2770324-2770343 | None:intergenic | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | - | chr3.2:2771552-2771571 | MS.gene058388:intron | 30.0% | |
| AGATAGTTCTTCAAAGATTG+GGG | - | chr3.2:2772052-2772071 | MS.gene058388:intron | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | - | chr3.2:2771587-2771606 | MS.gene058388:intron | 30.0% | |
| ATTTACATATGGGATAGAAC+TGG | - | chr3.2:2771562-2771581 | MS.gene058388:intron | 30.0% | |
| CAATTATAGCCATAACTACA+AGG | + | chr3.2:2769855-2769874 | None:intergenic | 30.0% | |
| CCAATTCATTTGTAATGCAA+TGG | - | chr3.2:2770048-2770067 | MS.gene058388:intron | 30.0% | |
| CCATTGCATTACAAATGAAT+TGG | + | chr3.2:2770051-2770070 | None:intergenic | 30.0% | |
| CCCTAATTAGGAAAAATGTT+AGG | - | chr3.2:2769802-2769821 | MS.gene058388:intron | 30.0% | |
| CTGTGTTTATTTGAACTTCT+TGG | - | chr3.2:2769409-2769428 | MS.gene058388:CDS | 30.0% | |
| GAAAATAGTGAGCTTGAATA+TGG | - | chr3.2:2768899-2768918 | MS.gene058388:CDS | 30.0% | |
| GCAGTTCACAAAAAAGAAAT+AGG | + | chr3.2:2770358-2770377 | None:intergenic | 30.0% | |
| GCTATAATTGATGCTGAATT+AGG | - | chr3.2:2769865-2769884 | MS.gene058388:intron | 30.0% | |
| GGAGAAATTCTTGTAATTGA+CGG | - | chr3.2:2771190-2771209 | MS.gene058388:intron | 30.0% | |
| GTCTATATCACATTGATACT+AGG | - | chr3.2:2769971-2769990 | MS.gene058388:intron | 30.0% | |
| GTGTTTAAGTCAACAATCAT+CGG | + | chr3.2:2771019-2771038 | None:intergenic | 30.0% | |
| TATAGTTGTATAGTGTGTAG+CGG | + | chr3.2:2769747-2769766 | None:intergenic | 30.0% | |
| TATTCGTCTTCTATGCTATT+TGG | + | chr3.2:2769318-2769337 | None:intergenic | 30.0% | |
| TGACATTATAACAGTCAAGA+AGG | - | chr3.2:2771932-2771951 | MS.gene058388:intron | 30.0% | |
| TGTGTTGCATGTAATCTATT+TGG | - | chr3.2:2770414-2770433 | MS.gene058388:intron | 30.0% | |
| TGTTTATTTGAACTTCTTGG+TGG | - | chr3.2:2769412-2769431 | MS.gene058388:CDS | 30.0% | |
| TTAGTGAGTGTATATCTTTC+TGG | - | chr3.2:2770532-2770551 | MS.gene058388:intron | 30.0% | |
| TTCTGTGATACCATTAATGA+TGG | - | chr3.2:2770206-2770225 | MS.gene058388:intron | 30.0% | |
| TTTGCACACAAAAATTTACC+AGG | + | chr3.2:2769155-2769174 | None:intergenic | 30.0% | |
| ! | AACATTTTATTCAGCAGGAA+CGG | - | chr3.2:2771268-2771287 | MS.gene058388:intron | 30.0% |
| ! | ATTAACTTGAGGGCAAATTT+GGG | + | chr3.2:2769379-2769398 | None:intergenic | 30.0% |
| ! | TAAAACTTTTGCGATGAGTT+CGG | - | chr3.2:2770379-2770398 | MS.gene058388:intron | 30.0% |
| ! | TGAAGAACATTTTATTCAGC+AGG | - | chr3.2:2771263-2771282 | MS.gene058388:intron | 30.0% |
| ! | TTAGGTTTGAAGTGTGTATA+AGG | - | chr3.2:2769883-2769902 | MS.gene058388:intron | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | - | chr3.2:2771147-2771166 | MS.gene058388:intron | 30.0% |
| !! | ATAACCTTGTAATTTTAGCG+AGG | + | chr3.2:2768600-2768619 | None:intergenic | 30.0% |
| !! | CTCTTTTATTCATGCTGTTT+TGG | - | chr3.2:2768298-2768317 | MS.gene058388:CDS | 30.0% |
| !! | TAAATAAGCTTTAGGTCGAA+AGG | + | chr3.2:2769439-2769458 | None:intergenic | 30.0% |
| !!! | GCAACCTGGTTTTAAAATAA+AGG | - | chr3.2:2768849-2768868 | MS.gene058388:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | - | chr3.2:2770757-2770776 | MS.gene058388:intron | 30.0% |
| !!! | TCTGCCTTTATTTTAAAACC+AGG | + | chr3.2:2768856-2768875 | None:intergenic | 30.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | - | chr3.2:2770756-2770775 | MS.gene058388:intron | 30.0% |
| AAATCAATTAGGGCTTCCTT+AGG | + | chr3.2:2771613-2771632 | None:intergenic | 35.0% | |
| AATGAATTGGACCAGAAAAC+AGG | + | chr3.2:2770038-2770057 | None:intergenic | 35.0% | |
| ACCATTGTGAATAGTTGGTT+GGG | - | chr3.2:2768680-2768699 | MS.gene058388:CDS | 35.0% | |
| ACTCAAATGATCGAGTAATC+AGG | - | chr3.2:2771308-2771327 | MS.gene058388:intron | 35.0% | |
| AGAATCCAAAATTACATGGG+TGG | - | chr3.2:2768524-2768543 | MS.gene058388:intron | 35.0% | |
| AGATACTCTTCTATCACTTC+TGG | + | chr3.2:2768202-2768221 | None:intergenic | 35.0% | |
| AGCTTGAATATGGACTTGAT+TGG | - | chr3.2:2768909-2768928 | MS.gene058388:CDS | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | + | chr3.2:2770691-2770710 | None:intergenic | 35.0% | |
| AGTGATTTATACCAGCAAGA+AGG | + | chr3.2:2768270-2768289 | None:intergenic | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | - | chr3.2:2771905-2771924 | MS.gene058388:intron | 35.0% | |
| ATGCCATGCCAAATCAATTA+GGG | + | chr3.2:2771623-2771642 | None:intergenic | 35.0% | |
| CATAGAGATTGAGGAAAATG+AGG | - | chr3.2:2771741-2771760 | MS.gene058388:intron | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | - | chr3.2:2771586-2771605 | MS.gene058388:intron | 35.0% | |
| CCAAATTACAGCGATATTTG+AGG | + | chr3.2:2768448-2768467 | None:intergenic | 35.0% | |
| CCTCAAATATCGCTGTAATT+TGG | - | chr3.2:2768445-2768464 | MS.gene058388:intron | 35.0% | |
| CTTCACATTGTAGAGAATTG+TGG | - | chr3.2:2768787-2768806 | MS.gene058388:CDS | 35.0% | |
| CTTGTAATTGACGGTAAAGA+AGG | - | chr3.2:2771199-2771218 | MS.gene058388:intron | 35.0% | |
| GACCAACAAATACTGGTAAT+GGG | + | chr3.2:2770821-2770840 | None:intergenic | 35.0% | |
| GAGTGGCATAGTTTATATCT+GGG | - | chr3.2:2771675-2771694 | MS.gene058388:intron | 35.0% | |
| GATTAACACCCTTGTAGTTA+TGG | - | chr3.2:2769843-2769862 | MS.gene058388:intron | 35.0% | |
| GTAAATAACAGCTGCTATAG+TGG | - | chr3.2:2769266-2769285 | MS.gene058388:CDS | 35.0% | |
| GTGATTTATACCAGCAAGAA+GGG | + | chr3.2:2768269-2768288 | None:intergenic | 35.0% | |
| TAAATCTGCATCTGAATGTG+TGG | - | chr3.2:2770601-2770620 | MS.gene058388:intron | 35.0% | |
| TAAGGAAGCCCTAATTGATT+TGG | - | chr3.2:2771612-2771631 | MS.gene058388:intron | 35.0% | |
| TACCATATGTGTATGAAGCA+CGG | - | chr3.2:2769530-2769549 | MS.gene058388:CDS | 35.0% | |
| TACCATTGTGAATAGTTGGT+TGG | - | chr3.2:2768679-2768698 | MS.gene058388:CDS | 35.0% | |
| TAGATAACATAGCTCTTCCT+CGG | + | chr3.2:2771985-2772004 | None:intergenic | 35.0% | |
| TAGTTGGTTGGGAAAGAAAT+AGG | - | chr3.2:2768691-2768710 | MS.gene058388:CDS | 35.0% | |
| TATGGAAACCTGGTTTATGT+GGG | - | chr3.2:2771157-2771176 | MS.gene058388:intron | 35.0% | |
| TCAAATAAACACAGCGTGAA+TGG | + | chr3.2:2769403-2769422 | None:intergenic | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | + | chr3.2:2771802-2771821 | None:intergenic | 35.0% | |
| TCCTCAATCTCTATGAAATC+AGG | + | chr3.2:2771736-2771755 | None:intergenic | 35.0% | |
| TCCTGATTTCATAGAGATTG+AGG | - | chr3.2:2771732-2771751 | MS.gene058388:intron | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr3.2:2769584-2769603 | None:intergenic | 35.0% | |
| TGACCAACAAATACTGGTAA+TGG | + | chr3.2:2770822-2770841 | None:intergenic | 35.0% | |
| TGAGTGGCATAGTTTATATC+TGG | - | chr3.2:2771674-2771693 | MS.gene058388:intron | 35.0% | |
| TGATTGCATCTTGAAACTCA+CGG | + | chr3.2:2771459-2771478 | None:intergenic | 35.0% | |
| TGTGAACGTTATATGGTCAT+AGG | - | chr3.2:2771817-2771836 | MS.gene058388:intron | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | + | chr3.2:2771136-2771155 | None:intergenic | 35.0% | |
| TTCATATCCTTGCAGGAAAA+AGG | - | chr3.2:2771882-2771901 | MS.gene058388:intron | 35.0% | |
| TTGACACAAAGTATGAAGCA+CGG | + | chr3.2:2769672-2769691 | None:intergenic | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | - | chr3.2:2771405-2771424 | MS.gene058388:intron | 35.0% |
| ! | ACCAGTATTTGTTGGTCAAA+GGG | - | chr3.2:2770824-2770843 | MS.gene058388:intron | 35.0% |
| ! | AGAAAATTATGTGTCGGTGT+CGG | - | chr3.2:2769601-2769620 | MS.gene058388:intron | 35.0% |
| ! | AGATTCCACCCATGTAATTT+TGG | + | chr3.2:2768532-2768551 | None:intergenic | 35.0% |
| ! | AGCTGTTATTTACTAGACAC+AGG | + | chr3.2:2769259-2769278 | None:intergenic | 35.0% |
| ! | AGTGCTCTAACTTCATCTTT+TGG | + | chr3.2:2771355-2771374 | None:intergenic | 35.0% |
| ! | ATGATGGAAGCTGTGTTATT+TGG | - | chr3.2:2770741-2770760 | MS.gene058388:intron | 35.0% |
| ! | CATTAACTTGAGGGCAAATT+TGG | + | chr3.2:2769380-2769399 | None:intergenic | 35.0% |
| ! | GAGAGCACAAGATTTACATA+TGG | - | chr3.2:2771551-2771570 | MS.gene058388:intron | 35.0% |
| ! | GTTTGAAGTGTGTATAAGGA+GGG | - | chr3.2:2769887-2769906 | MS.gene058388:intron | 35.0% |
| ! | TAACTCTGGATCACCATTTT+CGG | - | chr3.2:2772082-2772101 | MS.gene058388:CDS | 35.0% |
| ! | TACCAGTATTTGTTGGTCAA+AGG | - | chr3.2:2770823-2770842 | MS.gene058388:intron | 35.0% |
| ! | TATACCGTTATCCTGTTTTC+TGG | - | chr3.2:2770024-2770043 | MS.gene058388:intron | 35.0% |
| ! | TTTGGCTAATTTTCAGACCT+CGG | + | chr3.2:2768471-2768490 | None:intergenic | 35.0% |
| !! | AATAAGCTGATTTGTACGCT+AGG | - | chr3.2:2769175-2769194 | MS.gene058388:CDS | 35.0% |
| !! | AGAAGTGATAGAAGAGTATC+TGG | - | chr3.2:2768201-2768220 | MS.gene058388:CDS | 35.0% |
| !! | ATAAGCTGATTTGTACGCTA+GGG | - | chr3.2:2769176-2769195 | MS.gene058388:CDS | 35.0% |
| !! | ATAGAAGAGTATCTGGAACA+TGG | - | chr3.2:2768208-2768227 | MS.gene058388:CDS | 35.0% |
| !! | GTTTTGTCTGTTTCTTTGAG+TGG | - | chr3.2:2771658-2771677 | MS.gene058388:intron | 35.0% |
| !! | TAGAAGAGTATCTGGAACAT+GGG | - | chr3.2:2768209-2768228 | MS.gene058388:CDS | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | - | chr3.2:2770742-2770761 | MS.gene058388:intron | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | - | chr3.2:2770758-2770777 | MS.gene058388:intron | 35.0% |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | - | chr3.2:2771139-2771158 | MS.gene058388:intron | 35.0% |
| AACCAAGTTCATATCCTTGC+AGG | - | chr3.2:2771875-2771894 | MS.gene058388:intron | 40.0% | |
| AAGAACCTCGGTGATCTAAA+TGG | - | chr3.2:2771388-2771407 | MS.gene058388:intron | 40.0% | |
| ACCCTTTGACCAACAAATAC+TGG | + | chr3.2:2770828-2770847 | None:intergenic | 40.0% | |
| AGAATTGTGGTCGAATGATG+CGG | - | chr3.2:2768800-2768819 | MS.gene058388:CDS | 40.0% | |
| AGACAAGTCATTATCCCTGT+GGG | - | chr3.2:2770874-2770893 | MS.gene058388:intron | 40.0% | |
| ATCCGTGCTTCATACACATA+TGG | + | chr3.2:2769535-2769554 | None:intergenic | 40.0% | |
| ATGAAGACGAGCTAGTAAAG+GGG | + | chr3.2:2770945-2770964 | None:intergenic | 40.0% | |
| ATGTGTATGAAGCACGGATA+CGG | - | chr3.2:2769536-2769555 | MS.gene058388:CDS | 40.0% | |
| ATTTACCAGGTTGCGCTATT+TGG | + | chr3.2:2769142-2769161 | None:intergenic | 40.0% | |
| CAGACCTCGCTAAAATTACA+AGG | - | chr3.2:2768593-2768612 | MS.gene058388:CDS | 40.0% | |
| CCAGTTCTCAATGTACTCTT+TGG | + | chr3.2:2771701-2771720 | None:intergenic | 40.0% | |
| CTCCCATTACCAGTATTTGT+TGG | - | chr3.2:2770816-2770835 | MS.gene058388:intron | 40.0% | |
| GACAAAACAATTGGACGTAC+AGG | + | chr3.2:2771646-2771665 | None:intergenic | 40.0% | |
| GATGAAGACGAGCTAGTAAA+GGG | + | chr3.2:2770946-2770965 | None:intergenic | 40.0% | |
| GATGCCATGCCAAATCAATT+AGG | + | chr3.2:2771624-2771643 | None:intergenic | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | - | chr3.2:2771156-2771175 | MS.gene058388:intron | 40.0% | |
| GTTGAACTGAACAAGAACCT+CGG | - | chr3.2:2771376-2771395 | MS.gene058388:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | - | chr3.2:2771169-2771188 | MS.gene058388:intron | 40.0% | |
| TCCCAACCAACTATTCACAA+TGG | + | chr3.2:2768684-2768703 | None:intergenic | 40.0% | |
| TCCTGAAATCTAATCCCACA+AGG | + | chr3.2:2770505-2770524 | None:intergenic | 40.0% | |
| TCCTTGTGGGATTAGATTTC+AGG | - | chr3.2:2770501-2770520 | MS.gene058388:intron | 40.0% | |
| TCTGGAAAATCACCTTGCAA+CGG | + | chr3.2:2768184-2768203 | None:intergenic | 40.0% | |
| TGGACCAGAAAACAGGATAA+CGG | + | chr3.2:2770031-2770050 | None:intergenic | 40.0% | |
| TGTGTTCCAACCAATGATGA+TGG | - | chr3.2:2769042-2769061 | MS.gene058388:CDS | 40.0% | |
| TTAATGAGGGTGAATGTGTG+TGG | - | chr3.2:2770280-2770299 | MS.gene058388:intron | 40.0% | |
| TTCCTGCAAGGATATGAACT+TGG | + | chr3.2:2771880-2771899 | None:intergenic | 40.0% | |
| TTGTATAGTGTGTAGCGGTA+TGG | + | chr3.2:2769742-2769761 | None:intergenic | 40.0% | |
| TTGTGGGATTAGATTTCAGG+AGG | - | chr3.2:2770504-2770523 | MS.gene058388:intron | 40.0% | |
| TTTACTAGCTCGTCTTCATC+CGG | - | chr3.2:2770946-2770965 | MS.gene058388:intron | 40.0% | |
| ! | AGTATTTGTTGGTCAAAGGG+TGG | - | chr3.2:2770827-2770846 | MS.gene058388:intron | 40.0% |
| ! | ATCACCATTTTCGGAAGAAG+TGG | - | chr3.2:2772091-2772110 | MS.gene058388:CDS | 40.0% |
| ! | ATCAGATCCTTTTTCCTGCA+AGG | + | chr3.2:2771892-2771911 | None:intergenic | 40.0% |
| ! | ATCGATTGGTTGCCCTAATT+AGG | - | chr3.2:2769790-2769809 | MS.gene058388:intron | 40.0% |
| ! | CCAAAGAGTACATTGAGAAC+TGG | - | chr3.2:2771698-2771717 | MS.gene058388:intron | 40.0% |
| ! | CGTGAATGGCATTAACTTGA+GGG | + | chr3.2:2769389-2769408 | None:intergenic | 40.0% |
| ! | GCTCTAACTTCATCTTTTGG+CGG | + | chr3.2:2771352-2771371 | None:intergenic | 40.0% |
| ! | GGTTTGAAGTGTGTATAAGG+AGG | - | chr3.2:2769886-2769905 | MS.gene058388:intron | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | - | chr3.2:2771750-2771769 | MS.gene058388:intron | 40.0% |
| ! | TGTATAAGGAGGGAAAGTGT+AGG | - | chr3.2:2769897-2769916 | MS.gene058388:intron | 40.0% |
| !! | AAGCCCTAATTGATTTGGCA+TGG | - | chr3.2:2771617-2771636 | MS.gene058388:intron | 40.0% |
| !! | AGATTTGGTTCTCATGCAAG+TGG | - | chr3.2:2770165-2770184 | MS.gene058388:intron | 40.0% |
| !! | CAAGGGTGTTAATCTGCAAT+TGG | + | chr3.2:2769837-2769856 | None:intergenic | 40.0% |
| AACAACCTGTCATCCTGTTC+AGG | + | chr3.2:2772032-2772051 | None:intergenic | 45.0% | |
| AATCACGAAAGTCCACTGGA+AGG | - | chr3.2:2771474-2771493 | MS.gene058388:intron | 45.0% | |
| AATTGACGGTAAAGAAGGCG+AGG | - | chr3.2:2771204-2771223 | MS.gene058388:intron | 45.0% | |
| ACACAGACTGCCATCATCAT+TGG | + | chr3.2:2769055-2769074 | None:intergenic | 45.0% | |
| ACCACCAGAGATAGGAATCA+TGG | + | chr3.2:2771236-2771255 | None:intergenic | 45.0% | |
| ACTACTGAACCACCAGAGAT+AGG | + | chr3.2:2771244-2771263 | None:intergenic | 45.0% | |
| AGACTGCCATCATCATTGGT+TGG | + | chr3.2:2769051-2769070 | None:intergenic | 45.0% | |
| ATATCAGAGTCGCAGAAAGC+AGG | + | chr3.2:2771960-2771979 | None:intergenic | 45.0% | |
| ATATCGCTGTAATTTGGCCG+AGG | - | chr3.2:2768451-2768470 | MS.gene058388:intron | 45.0% | |
| ATATTCTGATGCCTCCGCAA+TGG | + | chr3.2:2769018-2769037 | None:intergenic | 45.0% | |
| ATGCAATCACGAAAGTCCAC+TGG | - | chr3.2:2771470-2771489 | MS.gene058388:intron | 45.0% | |
| ATGGAATGATGCCGCAAATC+CGG | - | chr3.2:2768374-2768393 | MS.gene058388:CDS | 45.0% | |
| ATGTTCCTGAACAGGATGAC+AGG | - | chr3.2:2772024-2772043 | MS.gene058388:intron | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | - | chr3.2:2772068-2772087 | MS.gene058388:intron | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | + | chr3.2:2771396-2771415 | None:intergenic | 45.0% | |
| CACCAAGCAGAAAGATGGTT+TGG | + | chr3.2:2770978-2770997 | None:intergenic | 45.0% | |
| CAGACAAGTCATTATCCCTG+TGG | - | chr3.2:2770873-2770892 | MS.gene058388:intron | 45.0% | |
| CATGTTGAAGATCCGTTGCA+AGG | - | chr3.2:2768169-2768188 | MS.gene058388:CDS | 45.0% | |
| CTCCAAACCATCTTTCTGCT+TGG | - | chr3.2:2770973-2770992 | MS.gene058388:intron | 45.0% | |
| CTGCATCTGAATGTGTGGAT+TGG | - | chr3.2:2770606-2770625 | MS.gene058388:intron | 45.0% | |
| GAAAATCCTTGAAGGGCCTA+AGG | - | chr3.2:2771594-2771613 | MS.gene058388:intron | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | + | chr3.2:2772098-2772117 | None:intergenic | 45.0% | |
| GGATGAAGACGAGCTAGTAA+AGG | + | chr3.2:2770947-2770966 | None:intergenic | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | - | chr3.2:2770894-2770913 | MS.gene058388:intron | 45.0% | |
| GTCAACAATCATCGGAGTAC+AGG | + | chr3.2:2771011-2771030 | None:intergenic | 45.0% | |
| GTCATCCTGTTCAGGAACAT+CGG | + | chr3.2:2772024-2772043 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | - | chr3.2:2771412-2771431 | MS.gene058388:intron | 45.0% | |
| TCATCCTGTTCAGGAACATC+GGG | + | chr3.2:2772023-2772042 | None:intergenic | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | + | chr3.2:2771168-2771187 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | - | chr3.2:2772101-2772120 | MS.gene058388:CDS | 45.0% | |
| TGACACACCAAGCAGAAAGA+TGG | + | chr3.2:2770983-2771002 | None:intergenic | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | + | chr3.2:2772017-2772036 | None:intergenic | 45.0% | |
| TTACTAGCTCGTCTTCATCC+GGG | - | chr3.2:2770947-2770966 | MS.gene058388:intron | 45.0% | |
| ! | CAAGCAGAAAGATGGTTTGG+AGG | + | chr3.2:2770975-2770994 | None:intergenic | 45.0% |
| ! | GCGTGAATGGCATTAACTTG+AGG | + | chr3.2:2769390-2769409 | None:intergenic | 45.0% |
| ! | TCTGTCTCTGAGAAACCAAG+TGG | - | chr3.2:2771064-2771083 | MS.gene058388:intron | 45.0% |
| !! | TGTGAAGGAGGTACTTCCAT+CGG | + | chr3.2:2771113-2771132 | None:intergenic | 45.0% |
| ACATCGGGAATGGGAGATAC+TGG | + | chr3.2:2772008-2772027 | None:intergenic | 50.0% | |
| ACATGCAGCAGTAGGTGTGA+AGG | + | chr3.2:2771128-2771147 | None:intergenic | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | + | chr3.2:2770891-2770910 | None:intergenic | 50.0% | |
| ATCACCATTGCAGCAGCATC+AGG | + | chr3.2:2768988-2769007 | None:intergenic | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | - | chr3.2:2772016-2772035 | MS.gene058388:intron | 50.0% | |
| CGTGCCATGATTCCTATCTC+TGG | - | chr3.2:2771229-2771248 | MS.gene058388:intron | 50.0% | |
| CTGTTCAGGAACATCGGGAA+TGG | + | chr3.2:2772018-2772037 | None:intergenic | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | - | chr3.2:2770725-2770744 | MS.gene058388:intron | 50.0% | |
| GCCATGATTCCTATCTCTGG+TGG | - | chr3.2:2771232-2771251 | MS.gene058388:intron | 50.0% | |
| GCTGCTATAGTGGCATTGCA+CGG | - | chr3.2:2769276-2769295 | MS.gene058388:CDS | 50.0% | |
| GTGTAGGTCTCCTGGATACT+CGG | - | chr3.2:2769913-2769932 | MS.gene058388:intron | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | + | chr3.2:2770892-2770911 | None:intergenic | 50.0% | |
| TACTAGCTCGTCTTCATCCG+GGG | - | chr3.2:2770948-2770967 | MS.gene058388:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr3.2:2769661-2769680 | None:intergenic | 50.0% | |
| TCACGCAACAAGTGTTCCGA+TGG | - | chr3.2:2771094-2771113 | MS.gene058388:intron | 50.0% | |
| TCTCCGTCACCACTGAAACA+GGG | + | chr3.2:2771502-2771521 | None:intergenic | 50.0% | |
| TGGTGATACCGTTGCCATTG+CGG | - | chr3.2:2769001-2769020 | MS.gene058388:CDS | 50.0% | |
| TGTAGGTCTCCTGGATACTC+GGG | - | chr3.2:2769914-2769933 | MS.gene058388:intron | 50.0% | |
| TTCTGCCAAATAGCGCAACC+TGG | - | chr3.2:2769134-2769153 | MS.gene058388:CDS | 50.0% | |
| ! | AAAGATGGTTTGGAGGACCC+CGG | + | chr3.2:2770968-2770987 | None:intergenic | 50.0% |
| ! | AACACTTGTTGCGTGAGGCA+GGG | + | chr3.2:2771090-2771109 | None:intergenic | 50.0% |
| ! | ATCGGAACACTTGTTGCGTG+AGG | + | chr3.2:2771095-2771114 | None:intergenic | 50.0% |
| ! | CTGCTGACTGCAGGGAATTT+GGG | - | chr3.2:2768961-2768980 | MS.gene058388:CDS | 50.0% |
| ! | TGCACGGCATTTTTGTGCAG+TGG | - | chr3.2:2769292-2769311 | MS.gene058388:CDS | 50.0% |
| ! | TGCGTTGCTTTCAATCGTCG+TGG | - | chr3.2:2768241-2768260 | MS.gene058388:CDS | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | - | chr3.2:2771529-2771548 | MS.gene058388:intron | 50.0% |
| !! | TTTCAGTGGTGACGGAGAGT+GGG | - | chr3.2:2771504-2771523 | MS.gene058388:intron | 50.0% |
| ATCCCATACCCCGAGTATCC+AGG | + | chr3.2:2769926-2769945 | None:intergenic | 55.0% | |
| CCAAATTCCCTGCAGTCAGC+AGG | + | chr3.2:2768963-2768982 | None:intergenic | 55.0% | |
| CTCCTGGATACTCGGGGTAT+GGG | - | chr3.2:2769921-2769940 | MS.gene058388:intron | 55.0% | |
| CTCTCCGTCACCACTGAAAC+AGG | + | chr3.2:2771503-2771522 | None:intergenic | 55.0% | |
| CTGCAGTCAGCAGGAACTCA+CGG | + | chr3.2:2768954-2768973 | None:intergenic | 55.0% | |
| CTGCGACTCTGATATGTCCG+AGG | - | chr3.2:2771965-2771984 | MS.gene058388:intron | 55.0% | |
| GCACCCTGTTTCAGTGGTGA+CGG | - | chr3.2:2771496-2771515 | MS.gene058388:intron | 55.0% | |
| GCACGGATACGGACACAACA+CGG | - | chr3.2:2769547-2769566 | MS.gene058388:CDS | 55.0% | |
| GTAGGTCTCCTGGATACTCG+GGG | - | chr3.2:2769915-2769934 | MS.gene058388:intron | 55.0% | |
| TCCCTGTGGGATGTCTTGAG+TGG | - | chr3.2:2770887-2770906 | MS.gene058388:intron | 55.0% | |
| TCTCCTGGATACTCGGGGTA+TGG | - | chr3.2:2769920-2769939 | MS.gene058388:intron | 55.0% | |
| TGATACCGTTGCCATTGCGG+AGG | - | chr3.2:2769004-2769023 | MS.gene058388:CDS | 55.0% | |
| TGATGCCTCCGCAATGGCAA+CGG | + | chr3.2:2769012-2769031 | None:intergenic | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | + | chr3.2:2771125-2771144 | None:intergenic | 55.0% | |
| ! | CAGCTGACTGCAAGGCATCT+GGG | + | chr3.2:2768830-2768849 | None:intergenic | 55.0% |
| ! | CCTGCTGACTGCAGGGAATT+TGG | - | chr3.2:2768960-2768979 | MS.gene058388:CDS | 55.0% |
| ! | GAACACTTGTTGCGTGAGGC+AGG | + | chr3.2:2771091-2771110 | None:intergenic | 55.0% |
| ! | GAGGGAAAGTGTAGGTCTCC+TGG | - | chr3.2:2769905-2769924 | MS.gene058388:intron | 55.0% |
| ! | GTGAGTTCCTGCTGACTGCA+GGG | - | chr3.2:2768953-2768972 | MS.gene058388:CDS | 55.0% |
| ! | TGAAACAGGGTGCCTTCCAG+TGG | + | chr3.2:2771489-2771508 | None:intergenic | 55.0% |
| !! | GTTTCAGTGGTGACGGAGAG+TGG | - | chr3.2:2771503-2771522 | MS.gene058388:intron | 55.0% |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | - | chr3.2:2771490-2771509 | MS.gene058388:intron | 55.0% |
| ACACCGACGCATATCCGACC+GGG | - | chr3.2:2769624-2769643 | MS.gene058388:intron | 60.0% | |
| CCAGGTTGCAGCTGACTGCA+AGG | + | chr3.2:2768838-2768857 | None:intergenic | 60.0% | |
| CCTTGCAGTCAGCTGCAACC+TGG | - | chr3.2:2768835-2768854 | MS.gene058388:CDS | 60.0% | |
| CGTCGTGGTACCCTTCTTGC+TGG | - | chr3.2:2768256-2768275 | MS.gene058388:CDS | 60.0% | |
| GACACCGACGCATATCCGAC+CGG | - | chr3.2:2769623-2769642 | MS.gene058388:intron | 60.0% | |
| GACGGAGAGTGGGTAGTTGG+TGG | - | chr3.2:2771514-2771533 | MS.gene058388:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr3.2:2769655-2769674 | None:intergenic | 60.0% | |
| GGAACTCACGGTCAGGCAGT+CGG | + | chr3.2:2768942-2768961 | None:intergenic | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | + | chr3.2:2771603-2771622 | None:intergenic | 60.0% | |
| GGGTCCTGATGCTGCTGCAA+TGG | - | chr3.2:2768981-2769000 | MS.gene058388:CDS | 60.0% | |
| GTCAGCAGGAACTCACGGTC+AGG | + | chr3.2:2768949-2768968 | None:intergenic | 60.0% | |
| TGTCCCGGTCGGATATGCGT+CGG | + | chr3.2:2769630-2769649 | None:intergenic | 60.0% | |
| ! | CGTGAGTTCCTGCTGACTGC+AGG | - | chr3.2:2768952-2768971 | MS.gene058388:CDS | 60.0% |
| ! | GCAGCTGACTGCAAGGCATC+TGG | + | chr3.2:2768831-2768850 | None:intergenic | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr3.2:2769645-2769664 | None:intergenic | 60.0% |
| !! | GGTGACGGAGAGTGGGTAGT+TGG | - | chr3.2:2771511-2771530 | MS.gene058388:intron | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr3.2:2769641-2769660 | MS.gene058388:intron | 65.0% | |
| TTGCGTGAGGCAGGGCCACT+TGG | + | chr3.2:2771082-2771101 | None:intergenic | 65.0% | |
| ! | CGGATTAGGCGTGTCCCGGT+CGG | + | chr3.2:2769641-2769660 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 2768160 | 2772190 | 2768160 | ID=MS.gene058388 |
| chr3.2 | mRNA | 2768160 | 2772190 | 2768160 | ID=MS.gene058388.t1;Parent=MS.gene058388 |
| chr3.2 | exon | 2772073 | 2772190 | 2772073 | ID=MS.gene058388.t1.exon1;Parent=MS.gene058388.t1 |
| chr3.2 | CDS | 2772073 | 2772190 | 2772073 | ID=cds.MS.gene058388.t1;Parent=MS.gene058388.t1 |
| chr3.2 | exon | 2768537 | 2769618 | 2768537 | ID=MS.gene058388.t1.exon2;Parent=MS.gene058388.t1 |
| chr3.2 | CDS | 2768537 | 2769618 | 2768537 | ID=cds.MS.gene058388.t1;Parent=MS.gene058388.t1 |
| chr3.2 | exon | 2768160 | 2768453 | 2768160 | ID=MS.gene058388.t1.exon3;Parent=MS.gene058388.t1 |
| chr3.2 | CDS | 2768160 | 2768453 | 2768160 | ID=cds.MS.gene058388.t1;Parent=MS.gene058388.t1 |
| Gene Sequence |
| Protein sequence |
