Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058476.t1 | XP_003588828.1 | 94.7 | 285 | 14 | 1 | 1 | 284 | 1 | 285 | 7.40E-146 | 526.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058476.t1 | Q9SAH7 | 41.7 | 300 | 136 | 7 | 3 | 274 | 6 | 294 | 4.2e-49 | 196.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058476.t1 | G7I7M7 | 94.7 | 285 | 14 | 1 | 1 | 284 | 1 | 285 | 5.3e-146 | 526.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene058476.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051492 | MS.gene058476 | 0.815379 | 9.53E-52 | -1.69E-46 |
MS.gene051493 | MS.gene058476 | 0.83771 | 4.43E-57 | -1.69E-46 |
MS.gene051494 | MS.gene058476 | 0.832389 | 9.72E-56 | -1.69E-46 |
MS.gene058476 | MS.gene058477 | 0.819107 | 1.38E-52 | -1.69E-46 |
MS.gene058476 | MS.gene33107 | 0.83171 | 1.43E-55 | -1.69E-46 |
MS.gene058476 | MS.gene33108 | 0.918989 | 7.88E-87 | -1.69E-46 |
MS.gene058476 | MS.gene33109 | 0.819714 | 1.00E-52 | -1.69E-46 |
MS.gene058476 | MS.gene62931 | 0.81935 | 1.22E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058476.t1 | MTR_1g013760 | 94.737 | 285 | 14 | 1 | 1 | 284 | 1 | 285 | 0.0 | 543 |
MS.gene058476.t1 | MTR_3g106060 | 58.108 | 296 | 93 | 9 | 1 | 275 | 1 | 286 | 4.00e-101 | 298 |
MS.gene058476.t1 | MTR_2g105060 | 46.067 | 267 | 118 | 7 | 24 | 275 | 58 | 313 | 1.17e-64 | 205 |
MS.gene058476.t1 | MTR_2g105060 | 45.161 | 248 | 110 | 7 | 43 | 275 | 2 | 238 | 2.96e-57 | 184 |
MS.gene058476.t1 | MTR_4g007060 | 38.390 | 323 | 137 | 10 | 3 | 275 | 4 | 314 | 2.67e-51 | 171 |
MS.gene058476.t1 | MTR_4g007060 | 41.818 | 275 | 125 | 8 | 25 | 275 | 17 | 280 | 5.74e-51 | 169 |
MS.gene058476.t1 | MTR_1g013790 | 35.741 | 263 | 130 | 5 | 21 | 276 | 8 | 238 | 2.34e-41 | 143 |
MS.gene058476.t1 | MTR_4g007060 | 36.667 | 210 | 89 | 5 | 3 | 179 | 4 | 202 | 2.09e-27 | 106 |
MS.gene058476.t1 | MTR_7g110720 | 27.027 | 333 | 150 | 7 | 6 | 274 | 71 | 374 | 1.04e-26 | 108 |
MS.gene058476.t1 | MTR_7g110720 | 33.333 | 216 | 106 | 5 | 6 | 196 | 71 | 273 | 2.05e-26 | 107 |
MS.gene058476.t1 | MTR_2g023930 | 32.864 | 213 | 99 | 4 | 28 | 196 | 150 | 362 | 5.60e-26 | 107 |
MS.gene058476.t1 | MTR_3g053330 | 33.010 | 206 | 80 | 5 | 124 | 271 | 236 | 441 | 3.95e-24 | 101 |
MS.gene058476.t1 | MTR_4g107970 | 57.333 | 75 | 32 | 0 | 122 | 196 | 161 | 235 | 7.40e-24 | 101 |
MS.gene058476.t1 | MTR_4g107970 | 57.333 | 75 | 32 | 0 | 122 | 196 | 238 | 312 | 9.08e-24 | 101 |
MS.gene058476.t1 | MTR_4g094412 | 52.564 | 78 | 37 | 0 | 119 | 196 | 214 | 291 | 9.31e-24 | 100 |
MS.gene058476.t1 | MTR_4g094412 | 52.564 | 78 | 37 | 0 | 119 | 196 | 223 | 300 | 9.47e-24 | 100 |
MS.gene058476.t1 | MTR_7g009730 | 46.739 | 92 | 49 | 0 | 122 | 213 | 202 | 293 | 2.54e-23 | 99.8 |
MS.gene058476.t1 | MTR_4g132430 | 30.144 | 209 | 101 | 5 | 25 | 196 | 118 | 318 | 6.40e-23 | 98.2 |
MS.gene058476.t1 | MTR_2g088000 | 47.778 | 90 | 47 | 0 | 124 | 213 | 334 | 423 | 7.94e-23 | 98.2 |
MS.gene058476.t1 | MTR_2g045360 | 41.739 | 115 | 56 | 3 | 91 | 196 | 156 | 268 | 1.00e-22 | 97.4 |
MS.gene058476.t1 | MTR_4g132430 | 48.780 | 82 | 42 | 0 | 124 | 205 | 112 | 193 | 5.01e-22 | 94.4 |
MS.gene058476.t1 | MTR_4g049760 | 42.000 | 100 | 58 | 0 | 116 | 215 | 267 | 366 | 1.75e-20 | 91.3 |
MS.gene058476.t1 | MTR_3g056100 | 34.483 | 145 | 82 | 5 | 62 | 196 | 330 | 471 | 3.34e-20 | 90.5 |
MS.gene058476.t1 | MTR_3g056100 | 34.483 | 145 | 82 | 5 | 62 | 196 | 186 | 327 | 4.03e-20 | 90.1 |
MS.gene058476.t1 | MTR_3g056100 | 38.793 | 116 | 62 | 4 | 87 | 196 | 202 | 314 | 6.01e-20 | 89.4 |
MS.gene058476.t1 | MTR_3g056100 | 38.793 | 116 | 62 | 4 | 87 | 196 | 346 | 458 | 6.32e-20 | 89.7 |
MS.gene058476.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 253 | 308 | 1.99e-19 | 87.8 |
MS.gene058476.t1 | MTR_5g094430 | 31.788 | 151 | 85 | 5 | 79 | 213 | 17 | 165 | 9.91e-11 | 62.4 |
MS.gene058476.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 231 | 286 | 2.04e-19 | 87.8 |
MS.gene058476.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 365 | 420 | 2.25e-19 | 88.2 |
MS.gene058476.t1 | MTR_1g086790 | 48.649 | 74 | 33 | 2 | 123 | 196 | 146 | 214 | 2.79e-19 | 86.3 |
MS.gene058476.t1 | MTR_4g049790 | 50.685 | 73 | 36 | 0 | 124 | 196 | 297 | 369 | 3.53e-19 | 87.4 |
MS.gene058476.t1 | MTR_5g097490 | 52.703 | 74 | 32 | 2 | 124 | 197 | 239 | 309 | 3.75e-19 | 86.7 |
MS.gene058476.t1 | MTR_5g091390 | 47.297 | 74 | 34 | 2 | 123 | 196 | 145 | 213 | 4.97e-19 | 85.5 |
MS.gene058476.t1 | MTR_4g094588 | 57.895 | 57 | 23 | 1 | 140 | 196 | 179 | 234 | 5.85e-19 | 85.5 |
MS.gene058476.t1 | MTR_7g109800 | 48.052 | 77 | 37 | 2 | 120 | 196 | 128 | 201 | 6.83e-19 | 84.7 |
MS.gene058476.t1 | MTR_5g016610 | 52.632 | 57 | 27 | 0 | 140 | 196 | 200 | 256 | 8.61e-19 | 84.3 |
MS.gene058476.t1 | MTR_1g009613 | 36.538 | 104 | 55 | 1 | 93 | 196 | 227 | 319 | 1.45e-18 | 84.7 |
MS.gene058476.t1 | MTR_5g043880 | 47.297 | 74 | 34 | 2 | 123 | 196 | 112 | 180 | 2.35e-18 | 83.2 |
MS.gene058476.t1 | MTR_3g104750 | 46.053 | 76 | 38 | 2 | 121 | 196 | 88 | 160 | 2.41e-18 | 80.5 |
MS.gene058476.t1 | MTR_1g070455 | 47.945 | 73 | 36 | 1 | 127 | 197 | 279 | 351 | 3.29e-18 | 84.0 |
MS.gene058476.t1 | MTR_2g033820 | 47.297 | 74 | 34 | 2 | 123 | 196 | 191 | 259 | 4.50e-18 | 83.6 |
MS.gene058476.t1 | MTR_5g074400 | 47.945 | 73 | 35 | 2 | 124 | 196 | 407 | 476 | 4.59e-18 | 84.3 |
MS.gene058476.t1 | MTR_5g074400 | 50.877 | 57 | 26 | 2 | 140 | 196 | 244 | 298 | 1.66e-13 | 70.9 |
MS.gene058476.t1 | MTR_7g100510 | 50.746 | 67 | 32 | 1 | 130 | 196 | 352 | 417 | 4.78e-18 | 84.0 |
MS.gene058476.t1 | MTR_7g100510 | 56.897 | 58 | 23 | 2 | 140 | 197 | 190 | 245 | 8.33e-16 | 77.4 |
MS.gene058476.t1 | MTR_4g094908 | 47.692 | 65 | 34 | 0 | 140 | 204 | 267 | 331 | 5.77e-18 | 82.8 |
MS.gene058476.t1 | MTR_5g042920 | 47.945 | 73 | 35 | 2 | 124 | 196 | 307 | 376 | 6.19e-18 | 83.6 |
MS.gene058476.t1 | MTR_5g042920 | 52.632 | 57 | 25 | 2 | 140 | 196 | 152 | 206 | 1.77e-13 | 70.5 |
MS.gene058476.t1 | MTR_4g082580 | 46.341 | 82 | 38 | 3 | 115 | 196 | 259 | 334 | 9.58e-18 | 82.8 |
MS.gene058476.t1 | MTR_4g082580 | 47.368 | 57 | 29 | 1 | 140 | 196 | 146 | 201 | 9.92e-11 | 62.0 |
MS.gene058476.t1 | MTR_7g011820 | 47.945 | 73 | 35 | 2 | 124 | 196 | 397 | 466 | 2.56e-17 | 82.0 |
MS.gene058476.t1 | MTR_7g011820 | 49.123 | 57 | 27 | 2 | 140 | 196 | 229 | 283 | 2.48e-11 | 64.3 |
MS.gene058476.t1 | MTR_7g062220 | 49.333 | 75 | 37 | 1 | 140 | 214 | 125 | 198 | 3.90e-17 | 80.1 |
MS.gene058476.t1 | MTR_3g031220 | 46.575 | 73 | 36 | 2 | 124 | 196 | 352 | 421 | 5.47e-17 | 80.9 |
MS.gene058476.t1 | MTR_3g031220 | 50.877 | 57 | 26 | 2 | 140 | 196 | 199 | 253 | 4.19e-13 | 69.3 |
MS.gene058476.t1 | MTR_8g087000 | 51.724 | 58 | 28 | 0 | 140 | 197 | 78 | 135 | 8.72e-17 | 78.2 |
MS.gene058476.t1 | MTR_8g087000 | 51.724 | 58 | 28 | 0 | 140 | 197 | 77 | 134 | 9.21e-17 | 78.2 |
MS.gene058476.t1 | MTR_1g015140 | 50.877 | 57 | 27 | 1 | 140 | 196 | 103 | 158 | 1.76e-16 | 75.5 |
MS.gene058476.t1 | MTR_0117s0040 | 52.632 | 57 | 27 | 0 | 140 | 196 | 75 | 131 | 1.80e-16 | 77.4 |
MS.gene058476.t1 | MTR_4g013260 | 41.304 | 92 | 48 | 3 | 105 | 196 | 307 | 392 | 2.26e-16 | 79.3 |
MS.gene058476.t1 | MTR_4g013260 | 47.368 | 57 | 29 | 1 | 140 | 196 | 185 | 240 | 9.28e-13 | 68.6 |
MS.gene058476.t1 | MTR_7g079010 | 54.098 | 61 | 27 | 1 | 140 | 200 | 142 | 201 | 2.77e-16 | 76.3 |
MS.gene058476.t1 | MTR_3g108960 | 52.632 | 57 | 27 | 0 | 140 | 196 | 315 | 371 | 2.78e-16 | 78.6 |
MS.gene058476.t1 | MTR_7g028415 | 51.613 | 62 | 29 | 1 | 140 | 201 | 94 | 154 | 3.15e-16 | 75.1 |
MS.gene058476.t1 | MTR_7g028710 | 51.613 | 62 | 29 | 1 | 140 | 201 | 94 | 154 | 3.15e-16 | 75.1 |
MS.gene058476.t1 | MTR_4g127040 | 50.000 | 58 | 29 | 0 | 140 | 197 | 246 | 303 | 3.77e-16 | 77.4 |
MS.gene058476.t1 | MTR_8g092140 | 52.632 | 57 | 26 | 1 | 140 | 196 | 161 | 216 | 3.82e-16 | 76.3 |
MS.gene058476.t1 | MTR_2g016770 | 49.123 | 57 | 29 | 0 | 140 | 196 | 36 | 92 | 3.89e-16 | 75.9 |
MS.gene058476.t1 | MTR_3g095080 | 52.632 | 57 | 26 | 1 | 140 | 196 | 145 | 200 | 3.93e-16 | 75.9 |
MS.gene058476.t1 | MTR_7g080000 | 33.333 | 129 | 80 | 3 | 71 | 196 | 363 | 488 | 4.02e-16 | 78.6 |
MS.gene058476.t1 | MTR_2g016770 | 49.123 | 57 | 29 | 0 | 140 | 196 | 28 | 84 | 4.61e-16 | 75.5 |
MS.gene058476.t1 | MTR_3g095080 | 52.632 | 57 | 26 | 1 | 140 | 196 | 169 | 224 | 4.69e-16 | 76.3 |
MS.gene058476.t1 | MTR_7g080020 | 33.540 | 161 | 89 | 7 | 113 | 262 | 466 | 619 | 5.34e-16 | 78.2 |
MS.gene058476.t1 | MTR_7g071120 | 45.205 | 73 | 37 | 2 | 124 | 196 | 311 | 380 | 7.44e-16 | 77.8 |
MS.gene058476.t1 | MTR_7g071120 | 47.368 | 57 | 28 | 2 | 140 | 196 | 167 | 221 | 6.28e-11 | 62.8 |
MS.gene058476.t1 | MTR_3g009470 | 46.575 | 73 | 36 | 2 | 124 | 196 | 482 | 551 | 7.85e-16 | 77.8 |
MS.gene058476.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 281 | 335 | 7.25e-12 | 65.9 |
MS.gene058476.t1 | MTR_4g122530 | 45.205 | 73 | 37 | 2 | 124 | 196 | 195 | 264 | 9.61e-16 | 77.0 |
MS.gene058476.t1 | MTR_2g024350 | 34.426 | 122 | 73 | 3 | 140 | 254 | 9 | 130 | 1.09e-15 | 74.7 |
MS.gene058476.t1 | MTR_8g007270 | 52.632 | 57 | 26 | 1 | 140 | 196 | 155 | 210 | 2.10e-15 | 73.9 |
MS.gene058476.t1 | MTR_1g077780 | 41.026 | 78 | 43 | 2 | 119 | 196 | 44 | 118 | 2.40e-15 | 72.0 |
MS.gene058476.t1 | MTR_2g083870 | 52.632 | 57 | 27 | 0 | 140 | 196 | 81 | 137 | 3.15e-15 | 73.9 |
MS.gene058476.t1 | MTR_8g096730 | 46.774 | 62 | 32 | 1 | 140 | 201 | 71 | 131 | 3.24e-15 | 71.6 |
MS.gene058476.t1 | MTR_4g130900 | 50.877 | 57 | 27 | 1 | 140 | 196 | 360 | 415 | 8.77e-15 | 74.3 |
MS.gene058476.t1 | MTR_2g032030 | 50.877 | 57 | 28 | 0 | 140 | 196 | 268 | 324 | 1.70e-14 | 73.6 |
MS.gene058476.t1 | MTR_2g032030 | 50.877 | 57 | 28 | 0 | 140 | 196 | 268 | 324 | 1.84e-14 | 73.6 |
MS.gene058476.t1 | MTR_8g098945 | 49.123 | 57 | 29 | 0 | 140 | 196 | 130 | 186 | 2.77e-14 | 71.6 |
MS.gene058476.t1 | MTR_2g024380 | 32.773 | 119 | 73 | 3 | 140 | 251 | 252 | 370 | 4.09e-14 | 72.4 |
MS.gene058476.t1 | MTR_3g095040 | 49.123 | 57 | 28 | 1 | 140 | 196 | 119 | 174 | 4.17e-14 | 70.1 |
MS.gene058476.t1 | MTR_8g028565 | 45.614 | 57 | 31 | 0 | 140 | 196 | 156 | 212 | 7.49e-14 | 71.2 |
MS.gene058476.t1 | MTR_7g109600 | 47.368 | 57 | 30 | 0 | 140 | 196 | 54 | 110 | 9.63e-14 | 70.1 |
MS.gene058476.t1 | MTR_7g079040 | 47.368 | 57 | 30 | 0 | 140 | 196 | 155 | 211 | 1.81e-13 | 69.7 |
MS.gene058476.t1 | MTR_8g092010 | 45.614 | 57 | 30 | 1 | 140 | 196 | 109 | 164 | 1.84e-13 | 67.8 |
MS.gene058476.t1 | MTR_3g031220 | 50.877 | 57 | 26 | 2 | 140 | 196 | 199 | 253 | 2.93e-13 | 69.7 |
MS.gene058476.t1 | MTR_4g047580 | 34.783 | 92 | 60 | 0 | 124 | 215 | 266 | 357 | 4.84e-13 | 69.3 |
MS.gene058476.t1 | MTR_6g086555 | 38.636 | 88 | 48 | 4 | 111 | 197 | 182 | 264 | 4.88e-13 | 68.9 |
MS.gene058476.t1 | MTR_1g099600 | 36.842 | 76 | 48 | 0 | 140 | 215 | 186 | 261 | 6.69e-13 | 68.2 |
MS.gene058476.t1 | MTR_1g078260 | 41.333 | 75 | 40 | 3 | 124 | 197 | 234 | 305 | 8.92e-13 | 68.6 |
MS.gene058476.t1 | MTR_8g099350 | 42.667 | 75 | 41 | 1 | 140 | 212 | 133 | 207 | 3.75e-12 | 66.2 |
MS.gene058476.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 281 | 335 | 8.10e-12 | 65.5 |
MS.gene058476.t1 | MTR_3g090860 | 50.877 | 57 | 26 | 1 | 140 | 194 | 134 | 190 | 8.90e-12 | 65.1 |
MS.gene058476.t1 | MTR_5g097500 | 46.479 | 71 | 36 | 2 | 126 | 196 | 218 | 286 | 9.64e-12 | 64.7 |
MS.gene058476.t1 | MTR_5g067680 | 49.123 | 57 | 27 | 1 | 140 | 194 | 203 | 259 | 9.65e-12 | 65.1 |
MS.gene058476.t1 | MTR_8g067635 | 47.368 | 57 | 30 | 0 | 140 | 196 | 350 | 406 | 9.80e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058476.t1 | AT1G80840 | 41.967 | 305 | 138 | 9 | 3 | 278 | 6 | 300 | 2.21e-67 | 212 |
MS.gene058476.t1 | AT2G25000 | 40.636 | 283 | 122 | 7 | 6 | 278 | 23 | 269 | 1.58e-59 | 191 |
MS.gene058476.t1 | AT2G25000 | 41.603 | 262 | 110 | 6 | 24 | 278 | 1 | 226 | 4.84e-59 | 188 |
MS.gene058476.t1 | AT2G25000 | 41.603 | 262 | 110 | 6 | 24 | 278 | 1 | 226 | 4.84e-59 | 188 |
MS.gene058476.t1 | AT2G25000 | 41.509 | 265 | 112 | 6 | 21 | 278 | 20 | 248 | 1.32e-58 | 187 |
MS.gene058476.t1 | AT4G31800 | 40.379 | 317 | 136 | 10 | 3 | 278 | 4 | 308 | 2.18e-58 | 189 |
MS.gene058476.t1 | AT4G31800 | 53.529 | 170 | 69 | 4 | 111 | 278 | 82 | 243 | 4.41e-52 | 171 |
MS.gene058476.t1 | AT4G31800 | 39.720 | 214 | 85 | 7 | 3 | 176 | 4 | 213 | 3.67e-32 | 119 |
MS.gene058476.t1 | AT4G04450 | 47.826 | 92 | 48 | 0 | 124 | 215 | 183 | 274 | 6.44e-24 | 100 |
MS.gene058476.t1 | AT4G04450 | 47.826 | 92 | 48 | 0 | 124 | 215 | 277 | 368 | 1.58e-23 | 100 |
MS.gene058476.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.96e-23 | 99.0 |
MS.gene058476.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.96e-23 | 99.0 |
MS.gene058476.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.96e-23 | 99.0 |
MS.gene058476.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.96e-23 | 99.0 |
MS.gene058476.t1 | AT4G01720 | 32.995 | 197 | 99 | 4 | 28 | 196 | 105 | 296 | 5.09e-23 | 98.6 |
MS.gene058476.t1 | AT1G68150 | 49.425 | 87 | 44 | 0 | 124 | 210 | 220 | 306 | 5.55e-23 | 97.4 |
MS.gene058476.t1 | AT1G62300 | 54.795 | 73 | 33 | 0 | 124 | 196 | 297 | 369 | 7.77e-23 | 98.2 |
MS.gene058476.t1 | AT5G15130 | 54.054 | 74 | 34 | 0 | 140 | 213 | 186 | 259 | 1.50e-22 | 97.4 |
MS.gene058476.t1 | AT5G15130 | 54.054 | 74 | 34 | 0 | 140 | 213 | 228 | 301 | 1.99e-22 | 97.1 |
MS.gene058476.t1 | AT1G18860 | 64.912 | 57 | 20 | 0 | 140 | 196 | 240 | 296 | 1.93e-21 | 94.4 |
MS.gene058476.t1 | AT1G64000 | 57.377 | 61 | 25 | 1 | 140 | 200 | 115 | 174 | 3.41e-19 | 83.6 |
MS.gene058476.t1 | AT4G18170 | 53.333 | 60 | 27 | 1 | 137 | 196 | 170 | 228 | 7.05e-19 | 85.1 |
MS.gene058476.t1 | AT1G29860 | 53.333 | 60 | 27 | 1 | 137 | 196 | 134 | 192 | 7.24e-19 | 84.7 |
MS.gene058476.t1 | AT2G04880 | 57.627 | 59 | 24 | 1 | 138 | 196 | 282 | 339 | 1.05e-18 | 85.9 |
MS.gene058476.t1 | AT2G04880 | 57.627 | 59 | 24 | 1 | 138 | 196 | 306 | 363 | 1.15e-18 | 85.9 |
MS.gene058476.t1 | AT5G41570 | 57.377 | 61 | 25 | 1 | 140 | 200 | 99 | 158 | 1.45e-18 | 81.6 |
MS.gene058476.t1 | AT2G47260 | 55.000 | 60 | 26 | 1 | 137 | 196 | 172 | 230 | 1.86e-18 | 84.3 |
MS.gene058476.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 2.21e-18 | 84.7 |
MS.gene058476.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 2.21e-18 | 84.7 |
MS.gene058476.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 2.21e-18 | 84.7 |
MS.gene058476.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 2.21e-18 | 84.7 |
MS.gene058476.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.23e-18 | 82.0 |
MS.gene058476.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.29e-13 | 68.2 |
MS.gene058476.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.23e-18 | 82.0 |
MS.gene058476.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.29e-13 | 68.2 |
MS.gene058476.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.23e-18 | 82.0 |
MS.gene058476.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.29e-13 | 68.2 |
MS.gene058476.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.23e-18 | 82.0 |
MS.gene058476.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.29e-13 | 68.2 |
MS.gene058476.t1 | AT5G26170 | 50.877 | 57 | 27 | 1 | 140 | 196 | 114 | 169 | 2.28e-18 | 80.9 |
MS.gene058476.t1 | AT1G13960 | 47.945 | 73 | 35 | 2 | 124 | 196 | 243 | 312 | 3.28e-18 | 84.0 |
MS.gene058476.t1 | AT1G13960 | 50.877 | 57 | 26 | 2 | 140 | 196 | 77 | 131 | 2.04e-12 | 67.0 |
MS.gene058476.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 310 | 365 | 3.57e-18 | 84.3 |
MS.gene058476.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 342 | 397 | 3.74e-18 | 84.7 |
MS.gene058476.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 382 | 437 | 3.81e-18 | 84.7 |
MS.gene058476.t1 | AT1G13960 | 47.945 | 73 | 35 | 2 | 124 | 196 | 396 | 465 | 4.84e-18 | 84.3 |
MS.gene058476.t1 | AT1G13960 | 50.877 | 57 | 26 | 2 | 140 | 196 | 230 | 284 | 2.11e-12 | 67.4 |
MS.gene058476.t1 | AT2G03340 | 47.945 | 73 | 35 | 2 | 124 | 196 | 402 | 471 | 5.31e-18 | 84.0 |
MS.gene058476.t1 | AT2G03340 | 50.877 | 57 | 26 | 2 | 140 | 196 | 251 | 305 | 3.22e-13 | 69.7 |
MS.gene058476.t1 | AT5G46350 | 47.222 | 72 | 33 | 2 | 125 | 196 | 173 | 239 | 6.05e-18 | 82.8 |
MS.gene058476.t1 | AT5G49520 | 47.222 | 72 | 34 | 2 | 140 | 208 | 222 | 292 | 7.28e-18 | 83.2 |
MS.gene058476.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 194 | 290 | 8.92e-18 | 82.0 |
MS.gene058476.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 104 | 173 | 7.99e-13 | 67.8 |
MS.gene058476.t1 | AT4G31550 | 50.877 | 57 | 28 | 0 | 140 | 196 | 247 | 303 | 1.87e-17 | 81.3 |
MS.gene058476.t1 | AT4G31550 | 50.877 | 57 | 28 | 0 | 140 | 196 | 246 | 302 | 1.91e-17 | 81.3 |
MS.gene058476.t1 | AT2G30590 | 52.632 | 57 | 27 | 0 | 140 | 196 | 314 | 370 | 2.21e-17 | 81.6 |
MS.gene058476.t1 | AT5G13080 | 54.839 | 62 | 27 | 1 | 140 | 201 | 68 | 128 | 2.29e-17 | 77.4 |
MS.gene058476.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 2.56e-17 | 80.5 |
MS.gene058476.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 2.56e-17 | 80.5 |
MS.gene058476.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 2.56e-17 | 80.5 |
MS.gene058476.t1 | AT2G23320 | 49.123 | 57 | 29 | 0 | 140 | 196 | 241 | 297 | 2.63e-17 | 80.9 |
MS.gene058476.t1 | AT5G28650 | 44.186 | 86 | 40 | 2 | 127 | 210 | 248 | 327 | 3.05e-17 | 80.9 |
MS.gene058476.t1 | AT1G69810 | 50.000 | 74 | 36 | 1 | 124 | 196 | 130 | 203 | 3.14e-17 | 80.9 |
MS.gene058476.t1 | AT5G56270 | 47.945 | 73 | 35 | 2 | 124 | 196 | 474 | 543 | 3.51e-17 | 82.0 |
MS.gene058476.t1 | AT5G56270 | 50.877 | 57 | 26 | 2 | 140 | 196 | 274 | 328 | 3.46e-11 | 63.9 |
MS.gene058476.t1 | AT3G62340 | 51.562 | 64 | 30 | 1 | 133 | 196 | 112 | 174 | 4.08e-17 | 79.7 |
MS.gene058476.t1 | AT1G69810 | 50.000 | 74 | 36 | 1 | 124 | 196 | 188 | 261 | 4.47e-17 | 80.9 |
MS.gene058476.t1 | AT3G01080 | 46.575 | 73 | 36 | 2 | 124 | 196 | 293 | 362 | 6.66e-17 | 80.5 |
MS.gene058476.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 168 | 222 | 9.13e-11 | 62.4 |
MS.gene058476.t1 | AT3G01080 | 46.575 | 73 | 36 | 2 | 124 | 196 | 331 | 400 | 7.03e-17 | 80.5 |
MS.gene058476.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 206 | 260 | 8.30e-11 | 62.4 |
MS.gene058476.t1 | AT1G29280 | 50.877 | 57 | 28 | 0 | 140 | 196 | 75 | 131 | 1.07e-16 | 78.2 |
MS.gene058476.t1 | AT2G24570 | 50.877 | 57 | 28 | 0 | 140 | 196 | 244 | 300 | 1.35e-16 | 79.0 |
MS.gene058476.t1 | AT3G04670 | 44.444 | 72 | 38 | 1 | 127 | 196 | 248 | 319 | 1.52e-16 | 79.0 |
MS.gene058476.t1 | AT2G38470 | 45.205 | 73 | 37 | 2 | 124 | 196 | 349 | 418 | 2.49e-16 | 79.3 |
MS.gene058476.t1 | AT2G38470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 185 | 239 | 4.13e-13 | 69.7 |
MS.gene058476.t1 | AT4G24240 | 46.552 | 58 | 31 | 0 | 140 | 197 | 282 | 339 | 4.48e-16 | 77.8 |
MS.gene058476.t1 | AT4G30935 | 52.632 | 57 | 26 | 1 | 140 | 196 | 332 | 387 | 8.04e-16 | 77.4 |
MS.gene058476.t1 | AT2G44745 | 52.632 | 57 | 26 | 1 | 140 | 196 | 146 | 201 | 9.81e-16 | 74.7 |
MS.gene058476.t1 | AT2G30250 | 45.205 | 73 | 37 | 2 | 124 | 196 | 315 | 384 | 2.01e-15 | 76.3 |
MS.gene058476.t1 | AT2G30250 | 46.479 | 71 | 34 | 3 | 140 | 210 | 167 | 233 | 2.81e-11 | 63.9 |
MS.gene058476.t1 | AT3G01970 | 49.180 | 61 | 30 | 1 | 140 | 200 | 66 | 125 | 3.03e-15 | 71.6 |
MS.gene058476.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 259 | 325 | 3.82e-15 | 75.1 |
MS.gene058476.t1 | AT2G37260 | 46.479 | 71 | 36 | 2 | 126 | 196 | 72 | 140 | 5.65e-15 | 74.3 |
MS.gene058476.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 257 | 323 | 4.03e-15 | 74.7 |
MS.gene058476.t1 | AT2G37260 | 46.479 | 71 | 36 | 2 | 126 | 196 | 70 | 138 | 5.85e-15 | 74.3 |
MS.gene058476.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 339 | 405 | 4.17e-15 | 75.5 |
MS.gene058476.t1 | AT2G37260 | 46.479 | 71 | 36 | 2 | 126 | 196 | 152 | 220 | 5.95e-15 | 74.7 |
MS.gene058476.t1 | AT4G39410 | 50.877 | 57 | 27 | 1 | 140 | 196 | 224 | 279 | 5.17e-15 | 74.3 |
MS.gene058476.t1 | AT1G55600 | 52.632 | 57 | 26 | 1 | 140 | 196 | 308 | 363 | 5.30e-15 | 75.1 |
MS.gene058476.t1 | AT2G34830 | 47.692 | 65 | 34 | 0 | 132 | 196 | 208 | 272 | 8.30e-15 | 74.3 |
MS.gene058476.t1 | AT2G34830 | 47.692 | 65 | 34 | 0 | 132 | 196 | 217 | 281 | 8.34e-15 | 74.3 |
MS.gene058476.t1 | AT2G21900 | 44.444 | 72 | 38 | 2 | 126 | 196 | 95 | 165 | 8.74e-15 | 72.0 |
MS.gene058476.t1 | AT1G30650 | 47.692 | 65 | 34 | 0 | 132 | 196 | 210 | 274 | 1.82e-14 | 73.6 |
MS.gene058476.t1 | AT3G58710 | 49.123 | 57 | 29 | 0 | 140 | 196 | 71 | 127 | 3.32e-14 | 71.2 |
MS.gene058476.t1 | AT3G58710 | 49.123 | 57 | 29 | 0 | 140 | 196 | 72 | 128 | 3.35e-14 | 71.2 |
MS.gene058476.t1 | AT5G64810 | 37.805 | 82 | 46 | 3 | 116 | 196 | 89 | 166 | 4.27e-14 | 69.7 |
MS.gene058476.t1 | AT2G46130 | 50.877 | 57 | 27 | 1 | 140 | 196 | 31 | 86 | 6.72e-14 | 67.0 |
MS.gene058476.t1 | AT4G01250 | 45.614 | 57 | 31 | 0 | 140 | 196 | 129 | 185 | 1.20e-13 | 70.1 |
MS.gene058476.t1 | AT5G43290 | 40.789 | 76 | 43 | 2 | 121 | 196 | 97 | 170 | 1.56e-13 | 69.7 |
MS.gene058476.t1 | AT5G52830 | 43.478 | 69 | 39 | 0 | 140 | 208 | 166 | 234 | 1.57e-13 | 70.1 |
MS.gene058476.t1 | AT4G26440 | 43.836 | 73 | 38 | 2 | 124 | 196 | 359 | 428 | 1.73e-13 | 70.9 |
MS.gene058476.t1 | AT4G26440 | 47.368 | 57 | 28 | 2 | 140 | 196 | 179 | 233 | 7.38e-11 | 62.8 |
MS.gene058476.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 1110 | 1209 | 2.08e-13 | 70.9 |
MS.gene058476.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 1138 | 1237 | 2.15e-13 | 70.9 |
MS.gene058476.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 999 | 1098 | 2.17e-13 | 70.9 |
MS.gene058476.t1 | AT1G69310 | 50.877 | 57 | 23 | 2 | 140 | 196 | 148 | 199 | 7.12e-13 | 67.8 |
MS.gene058476.t1 | AT4G23550 | 30.714 | 140 | 88 | 4 | 138 | 275 | 139 | 271 | 1.00e-12 | 67.8 |
MS.gene058476.t1 | AT2G46400 | 40.698 | 86 | 46 | 3 | 111 | 194 | 79 | 161 | 2.66e-12 | 66.2 |
MS.gene058476.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 206 | 260 | 8.59e-11 | 62.0 |
MS.gene058476.t1 | AT1G80590 | 44.828 | 58 | 30 | 1 | 139 | 194 | 85 | 142 | 9.56e-11 | 60.8 |
Find 47 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTATTTCTGGAAGAATTT+TGG | 0.107436 | 1.4:+7642227 | MS.gene058476:CDS |
GCACTTGCCACTGCTATTTC+TGG | 0.167473 | 1.4:+7642216 | MS.gene058476:CDS |
TTTGGACCATACTTCTAATA+AGG | 0.232805 | 1.4:+7642245 | MS.gene058476:CDS |
GTCTTCACCTAAGGCTTATA+AGG | 0.247602 | 1.4:+7641117 | MS.gene058476:CDS |
AATTGCTTGATAGATGATTT+AGG | 0.254015 | 1.4:-7642141 | None:intergenic |
GCAAGTGCTGTAGTGAAATT+AGG | 0.319456 | 1.4:-7642201 | None:intergenic |
ATACGAACCTTGAGTATAAA+AGG | 0.320556 | 1.4:-7640116 | None:intergenic |
CAAAGTGAAGAAGCTCCTTT+AGG | 0.328438 | 1.4:+7642048 | MS.gene058476:CDS |
GGATATCAATGGAGGAAATA+TGG | 0.328462 | 1.4:+7641317 | MS.gene058476:CDS |
ATTTGGCCTTATTAGAAGTA+TGG | 0.343403 | 1.4:-7642251 | None:intergenic |
AATATGTTTGGTAATGTTAG+AGG | 0.347609 | 1.4:+7641016 | MS.gene058476:CDS |
TACATGGAAATTTCACCATT+TGG | 0.351460 | 1.4:-7642268 | None:intergenic |
TTGTGAACAGGACGAAGTTT+TGG | 0.359854 | 1.4:+7640820 | MS.gene058476:intron |
CCTCTCCTAGAGCTTACTTT+AGG | 0.371319 | 1.4:+7641363 | MS.gene058476:CDS |
TAAAAGGAACATTAACGTTA+AGG | 0.404032 | 1.4:-7640100 | None:intergenic |
TATGTTGCAACTAGTATAGT+AGG | 0.404321 | 1.4:-7641970 | None:intergenic |
GAAAGTTGCATCAATATGTT+TGG | 0.406359 | 1.4:+7641004 | MS.gene058476:CDS |
AGGAACATTATCAAGCTTCA+TGG | 0.420222 | 1.4:-7642121 | None:intergenic |
ATGAAGAATCATTAATCAAA+AGG | 0.454669 | 1.4:+7641080 | MS.gene058476:CDS |
CTAAAGGAGCTTCTTCACTT+TGG | 0.478227 | 1.4:-7642047 | None:intergenic |
ACAAGAACCTTATAAGCCTT+AGG | 0.486641 | 1.4:-7641124 | None:intergenic |
CATTAATCAAAAGGCCATGT+AGG | 0.493040 | 1.4:+7641089 | MS.gene058476:CDS |
ATACTAGTTGCAACATATGA+AGG | 0.494693 | 1.4:+7641976 | MS.gene058476:CDS |
AACTGGGCAGCTTGGAGCAT+AGG | 0.506437 | 1.4:-7641390 | None:intergenic |
ATACTTCTAATAAGGCCAAA+TGG | 0.514058 | 1.4:+7642253 | MS.gene058476:CDS |
ACATTATCAAGCTTCATGGT+TGG | 0.514996 | 1.4:-7642117 | None:intergenic |
TAGGGATATGTCTTCACCTA+AGG | 0.525286 | 1.4:+7641108 | MS.gene058476:CDS |
GAGCACCTAAAGTAAGCTCT+AGG | 0.538868 | 1.4:-7641368 | None:intergenic |
ATTAATCAAAAGGCCATGTA+GGG | 0.538909 | 1.4:+7641090 | MS.gene058476:CDS |
CCTAAAGTAAGCTCTAGGAG+AGG | 0.548395 | 1.4:-7641363 | None:intergenic |
GTAACATGAACTGAACCTAA+AGG | 0.560432 | 1.4:-7642063 | None:intergenic |
CTAAAGTAAGCTCTAGGAGA+GGG | 0.569732 | 1.4:-7641362 | None:intergenic |
GTCTCAGTTCTGAGAACAAG+AGG | 0.575865 | 1.4:+7640858 | MS.gene058476:CDS |
TTGTGGTATAAAGTATGTGA+TGG | 0.581181 | 1.4:+7641292 | MS.gene058476:intron |
ATGGAGGAAATATGGTCAGA+AGG | 0.585738 | 1.4:+7641325 | MS.gene058476:CDS |
TTTCAGATTTCTCATGACCA+TGG | 0.592416 | 1.4:-7642008 | None:intergenic |
GGTATAAAGTATGTGATGGA+TGG | 0.592987 | 1.4:+7641296 | MS.gene058476:intron |
ATGTGATGGATGGATATCAA+TGG | 0.593080 | 1.4:+7641306 | MS.gene058476:CDS |
ATGTTGCAACTAGTATAGTA+GGG | 0.601976 | 1.4:-7641969 | None:intergenic |
TGCAATGGAATCAACTTGTG+TGG | 0.619908 | 1.4:+7640064 | None:intergenic |
GGTGAAGACATATCCCTACA+TGG | 0.630918 | 1.4:-7641103 | None:intergenic |
GTTCTTTGAATAATTTGCTG+AGG | 0.646817 | 1.4:-7642090 | None:intergenic |
TAAAGTAAGCTCTAGGAGAG+GGG | 0.664718 | 1.4:-7641361 | None:intergenic |
TGATGGATGGATATCAATGG+AGG | 0.669535 | 1.4:+7641309 | MS.gene058476:CDS |
AATTCTTCCAGAAATAGCAG+TGG | 0.680346 | 1.4:-7642223 | None:intergenic |
TATGAAGGAGAGCACAACCA+TGG | 0.694590 | 1.4:+7641991 | MS.gene058476:CDS |
TAACATGTGTGAGAACTGTG+AGG | 0.784888 | 1.4:+7640898 | MS.gene058476:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATATTAATTCATAATCA+AGG | + | chr1.4:7640356-7640375 | MS.gene058476:intron | 10.0% |
!! | TATACTAATTTCATTAAAAT+TGG | + | chr1.4:7640723-7640742 | MS.gene058476:intron | 10.0% |
!! | AAAAATTTGACAAGAACTTT+CGG | + | chr1.4:7641539-7641558 | MS.gene058476:intron | 20.0% |
!! | ATGAAGAATCATTAATCAAA+AGG | + | chr1.4:7641080-7641099 | MS.gene058476:CDS | 20.0% |
!! | ATTCTTTCTCATCAATATAT+TGG | - | chr1.4:7641651-7641670 | None:intergenic | 20.0% |
!! | CGTTGAAAAGAAAAAATAAA+GGG | - | chr1.4:7641713-7641732 | None:intergenic | 20.0% |
!! | CTCTTATGTCATTATTAATT+AGG | + | chr1.4:7641927-7641946 | MS.gene058476:intron | 20.0% |
!! | TCGTTGAAAAGAAAAAATAA+AGG | - | chr1.4:7641714-7641733 | None:intergenic | 20.0% |
!! | TTTATATGAAAACATGTGAT+TGG | - | chr1.4:7641578-7641597 | None:intergenic | 20.0% |
!!! | ATCAAAACTTGATCTTATTT+GGG | - | chr1.4:7641907-7641926 | None:intergenic | 20.0% |
!!! | ATTATTACCTTCTTTTTAAC+TGG | - | chr1.4:7641410-7641429 | None:intergenic | 20.0% |
!!! | ATTGATGAGAAAGAATTTTA+GGG | + | chr1.4:7641655-7641674 | MS.gene058476:intron | 20.0% |
!!! | TATTGATGAGAAAGAATTTT+AGG | + | chr1.4:7641654-7641673 | MS.gene058476:intron | 20.0% |
!!! | TTAATTTTCATGTATGATCA+GGG | + | chr1.4:7640168-7640187 | MS.gene058476:intron | 20.0% |
!!! | TTATTACCTTCTTTTTAACT+GGG | - | chr1.4:7641409-7641428 | None:intergenic | 20.0% |
!!! | TTTAATTTTCATGTATGATC+AGG | + | chr1.4:7640167-7640186 | MS.gene058476:intron | 20.0% |
! | AATTGCTTGATAGATGATTT+AGG | - | chr1.4:7642144-7642163 | None:intergenic | 25.0% |
! | ACTTAAGAAAGTAGTTAACA+AGG | + | chr1.4:7640238-7640257 | MS.gene058476:intron | 25.0% |
! | ATGTTAAGAATACACATGTT+TGG | - | chr1.4:7641469-7641488 | None:intergenic | 25.0% |
! | CACTATATATACACCTAAAA+AGG | + | chr1.4:7640626-7640645 | MS.gene058476:intron | 25.0% |
! | GATCAAAACTTGATCTTATT+TGG | - | chr1.4:7641908-7641927 | None:intergenic | 25.0% |
! | TAAAAGGAACATTAACGTTA+AGG | - | chr1.4:7640103-7640122 | None:intergenic | 25.0% |
! | TCAATCAATCTTAACTACTA+TGG | - | chr1.4:7640534-7640553 | None:intergenic | 25.0% |
! | TTTCGATAGAGATTACTAAT+AGG | - | chr1.4:7641522-7641541 | None:intergenic | 25.0% |
!! | ATCATCTATCAAGCAATTTT+TGG | + | chr1.4:7642146-7642165 | MS.gene058476:CDS | 25.0% |
!! | GTAAACAAATGCTAAGATTT+TGG | + | chr1.4:7641857-7641876 | MS.gene058476:intron | 25.0% |
!! | TAATGTTCCTTTTATACTCA+AGG | + | chr1.4:7640109-7640128 | MS.gene058476:CDS | 25.0% |
!!! | AATATGTTTGGTAATGTTAG+AGG | + | chr1.4:7641016-7641035 | MS.gene058476:CDS | 25.0% |
AAGAAAGTAGTTAACAAGGT+TGG | + | chr1.4:7640242-7640261 | MS.gene058476:intron | 30.0% | |
AGATTACTAATAGGTGAAGT+AGG | - | chr1.4:7641513-7641532 | None:intergenic | 30.0% | |
ATACGAACCTTGAGTATAAA+AGG | - | chr1.4:7640119-7640138 | None:intergenic | 30.0% | |
ATACTAGTTGCAACATATGA+AGG | + | chr1.4:7641976-7641995 | MS.gene058476:CDS | 30.0% | |
ATACTTCTAATAAGGCCAAA+TGG | + | chr1.4:7642253-7642272 | MS.gene058476:CDS | 30.0% | |
ATGTTGCAACTAGTATAGTA+GGG | - | chr1.4:7641972-7641991 | None:intergenic | 30.0% | |
ATTAATCAAAAGGCCATGTA+GGG | + | chr1.4:7641090-7641109 | MS.gene058476:CDS | 30.0% | |
GAAAGTTGCATCAATATGTT+TGG | + | chr1.4:7641004-7641023 | MS.gene058476:CDS | 30.0% | |
TATGAAAACATGTGATTGGT+AGG | - | chr1.4:7641574-7641593 | None:intergenic | 30.0% | |
TATGTTGCAACTAGTATAGT+AGG | - | chr1.4:7641973-7641992 | None:intergenic | 30.0% | |
TCAATCTTAACTACTATGGA+TGG | - | chr1.4:7640530-7640549 | None:intergenic | 30.0% | |
TTGTGGTATAAAGTATGTGA+TGG | + | chr1.4:7641292-7641311 | MS.gene058476:intron | 30.0% | |
TTTGGACCATACTTCTAATA+AGG | + | chr1.4:7642245-7642264 | MS.gene058476:CDS | 30.0% | |
! | ACATTGGAAATTTTGTGAAC+AGG | + | chr1.4:7640808-7640827 | MS.gene058476:intron | 30.0% |
! | ATCGCTAATTCAACCTTTTT+AGG | - | chr1.4:7640642-7640661 | None:intergenic | 30.0% |
! | CAATGTCACTTAGAAATTCA+GGG | - | chr1.4:7640794-7640813 | None:intergenic | 30.0% |
!! | ATTTGGCCTTATTAGAAGTA+TGG | - | chr1.4:7642254-7642273 | None:intergenic | 30.0% |
!! | GTTCTTTGAATAATTTGCTG+AGG | - | chr1.4:7642093-7642112 | None:intergenic | 30.0% |
!!! | ACTTAGGGCACAAATTTTTT+TGG | - | chr1.4:7640480-7640499 | None:intergenic | 30.0% |
!!! | CTTAGGGCACAAATTTTTTT+GGG | - | chr1.4:7640479-7640498 | None:intergenic | 30.0% |
!!! | GCAATTTTTGGTTCAACAAA+TGG | + | chr1.4:7642158-7642177 | MS.gene058476:CDS | 30.0% |
!!! | TGCTATTTCTGGAAGAATTT+TGG | + | chr1.4:7642227-7642246 | MS.gene058476:CDS | 30.0% |
AATTCTTCCAGAAATAGCAG+TGG | - | chr1.4:7642226-7642245 | None:intergenic | 35.0% | |
AATTTGACAAGAACTTTCGG+TGG | + | chr1.4:7641542-7641561 | MS.gene058476:intron | 35.0% | |
ACAAGAACCTTATAAGCCTT+AGG | - | chr1.4:7641127-7641146 | None:intergenic | 35.0% | |
ACACACATTATTGAAGTTGC+TGG | - | chr1.4:7641222-7641241 | None:intergenic | 35.0% | |
ACATTATCAAGCTTCATGGT+TGG | - | chr1.4:7642120-7642139 | None:intergenic | 35.0% | |
AGGAACATTATCAAGCTTCA+TGG | - | chr1.4:7642124-7642143 | None:intergenic | 35.0% | |
ATTTGACAAGAACTTTCGGT+GGG | + | chr1.4:7641543-7641562 | MS.gene058476:intron | 35.0% | |
CATTAATCAAAAGGCCATGT+AGG | + | chr1.4:7641089-7641108 | MS.gene058476:CDS | 35.0% | |
CCTGAATTTCTAAGTGACAT+TGG | + | chr1.4:7640792-7640811 | MS.gene058476:intron | 35.0% | |
GGATATCAATGGAGGAAATA+TGG | + | chr1.4:7641317-7641336 | MS.gene058476:CDS | 35.0% | |
GTAACATGAACTGAACCTAA+AGG | - | chr1.4:7642066-7642085 | None:intergenic | 35.0% | |
TTACTAATAGGTGAAGTAGG+CGG | - | chr1.4:7641510-7641529 | None:intergenic | 35.0% | |
TTTCAGATTTCTCATGACCA+TGG | - | chr1.4:7642011-7642030 | None:intergenic | 35.0% | |
! | CATCAATATATTGGTCTGAG+TGG | - | chr1.4:7641642-7641661 | None:intergenic | 35.0% |
! | CCAATGTCACTTAGAAATTC+AGG | - | chr1.4:7640795-7640814 | None:intergenic | 35.0% |
! | GGTATAAAGTATGTGATGGA+TGG | + | chr1.4:7641296-7641315 | MS.gene058476:intron | 35.0% |
!! | ATGTGATGGATGGATATCAA+TGG | + | chr1.4:7641306-7641325 | MS.gene058476:CDS | 35.0% |
AAGCTGCCCAGTTAAAAAGA+AGG | + | chr1.4:7641400-7641419 | MS.gene058476:CDS | 40.0% | |
ATGGAGGAAATATGGTCAGA+AGG | + | chr1.4:7641325-7641344 | MS.gene058476:CDS | 40.0% | |
CAAAGTGAAGAAGCTCCTTT+AGG | + | chr1.4:7642048-7642067 | MS.gene058476:CDS | 40.0% | |
CTAAAGGAGCTTCTTCACTT+TGG | - | chr1.4:7642050-7642069 | None:intergenic | 40.0% | |
GAACGTGAGTGATGAATTGA+CGG | - | chr1.4:7640207-7640226 | None:intergenic | 40.0% | |
GTCTTCACCTAAGGCTTATA+AGG | + | chr1.4:7641117-7641136 | MS.gene058476:CDS | 40.0% | |
TAACATGTGTGAGAACTGTG+AGG | + | chr1.4:7640898-7640917 | MS.gene058476:CDS | 40.0% | |
TAGGGATATGTCTTCACCTA+AGG | + | chr1.4:7641108-7641127 | MS.gene058476:CDS | 40.0% | |
! | GCAAGTGCTGTAGTGAAATT+AGG | - | chr1.4:7642204-7642223 | None:intergenic | 40.0% |
! | TGATGGATGGATATCAATGG+AGG | + | chr1.4:7641309-7641328 | MS.gene058476:CDS | 40.0% |
! | TTGTGAACAGGACGAAGTTT+TGG | + | chr1.4:7640820-7640839 | MS.gene058476:intron | 40.0% |
!! | CTAAAGTAAGCTCTAGGAGA+GGG | - | chr1.4:7641365-7641384 | None:intergenic | 40.0% |
!! | TAAAGTAAGCTCTAGGAGAG+GGG | - | chr1.4:7641364-7641383 | None:intergenic | 40.0% |
!! | TTCTTTTTAACTGGGCAGCT+TGG | - | chr1.4:7641401-7641420 | None:intergenic | 40.0% |
CCTCTCCTAGAGCTTACTTT+AGG | + | chr1.4:7641363-7641382 | MS.gene058476:CDS | 45.0% | |
GAGCACCTAAAGTAAGCTCT+AGG | - | chr1.4:7641371-7641390 | None:intergenic | 45.0% | |
GGTGAAGACATATCCCTACA+TGG | - | chr1.4:7641106-7641125 | None:intergenic | 45.0% | |
! | AACTACTATGGATGGCCTTG+AGG | - | chr1.4:7640522-7640541 | None:intergenic | 45.0% |
! | TATGAAGGAGAGCACAACCA+TGG | + | chr1.4:7641991-7642010 | MS.gene058476:CDS | 45.0% |
!! | CCTAAAGTAAGCTCTAGGAG+AGG | - | chr1.4:7641366-7641385 | None:intergenic | 45.0% |
!! | GTCTCAGTTCTGAGAACAAG+AGG | + | chr1.4:7640858-7640877 | MS.gene058476:CDS | 45.0% |
!!! | TAAAAATTTAAAATTAATCA+AGG | - | chr1.4:7641271-7641290 | None:intergenic | 5.0% |
!!! | TAATTTTAAATTTTTATTTG+TGG | + | chr1.4:7641275-7641294 | MS.gene058476:intron | 5.0% |
! | ACTATGGATGGCCTTGAGGT+TGG | - | chr1.4:7640518-7640537 | None:intergenic | 50.0% |
! | CTATGGATGGCCTTGAGGTT+GGG | - | chr1.4:7640517-7640536 | None:intergenic | 50.0% |
!! | GCACTTGCCACTGCTATTTC+TGG | + | chr1.4:7642216-7642235 | MS.gene058476:CDS | 50.0% |
AACTGGGCAGCTTGGAGCAT+AGG | - | chr1.4:7641393-7641412 | None:intergenic | 55.0% | |
GCAGGAGGGGCGGAAACTTA+GGG | - | chr1.4:7640495-7640514 | None:intergenic | 60.0% | |
GCCTTGAGGTTGGGCAGGAG+GGG | - | chr1.4:7640508-7640527 | None:intergenic | 65.0% | |
GGCAGGAGGGGCGGAAACTT+AGG | - | chr1.4:7640496-7640515 | None:intergenic | 65.0% | |
GGCCTTGAGGTTGGGCAGGA+GGG | - | chr1.4:7640509-7640528 | None:intergenic | 65.0% | |
TTGAGGTTGGGCAGGAGGGG+CGG | - | chr1.4:7640505-7640524 | None:intergenic | 65.0% | |
! | GGATGGCCTTGAGGTTGGGC+AGG | - | chr1.4:7640513-7640532 | None:intergenic | 65.0% |
! | TGGCCTTGAGGTTGGGCAGG+AGG | - | chr1.4:7640510-7640529 | None:intergenic | 65.0% |
GCCCCTCCTGCCCAACCTCA+AGG | + | chr1.4:7640504-7640523 | MS.gene058476:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 7640068 | 7642278 | 7640068 | ID=MS.gene058476 |
chr1.4 | mRNA | 7640068 | 7642278 | 7640068 | ID=MS.gene058476.t1;Parent=MS.gene058476 |
chr1.4 | exon | 7640068 | 7640130 | 7640068 | ID=MS.gene058476.t1.exon1;Parent=MS.gene058476.t1 |
chr1.4 | CDS | 7640068 | 7640130 | 7640068 | ID=cds.MS.gene058476.t1;Parent=MS.gene058476.t1 |
chr1.4 | exon | 7640830 | 7641174 | 7640830 | ID=MS.gene058476.t1.exon2;Parent=MS.gene058476.t1 |
chr1.4 | CDS | 7640830 | 7641174 | 7640830 | ID=cds.MS.gene058476.t1;Parent=MS.gene058476.t1 |
chr1.4 | exon | 7641305 | 7641421 | 7641305 | ID=MS.gene058476.t1.exon3;Parent=MS.gene058476.t1 |
chr1.4 | CDS | 7641305 | 7641421 | 7641305 | ID=cds.MS.gene058476.t1;Parent=MS.gene058476.t1 |
chr1.4 | exon | 7641949 | 7642278 | 7641949 | ID=MS.gene058476.t1.exon4;Parent=MS.gene058476.t1 |
chr1.4 | CDS | 7641949 | 7642278 | 7641949 | ID=cds.MS.gene058476.t1;Parent=MS.gene058476.t1 |
Gene Sequence |
Protein sequence |