Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051493.t1 | XP_003588828.1 | 95.8 | 285 | 11 | 1 | 1 | 284 | 1 | 285 | 3.90E-147 | 530.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051493.t1 | Q9SAH7 | 43.4 | 297 | 135 | 8 | 3 | 274 | 6 | 294 | 2.9e-50 | 200.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051493.t1 | G7I7M7 | 95.8 | 285 | 11 | 1 | 1 | 284 | 1 | 285 | 2.8e-147 | 530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051493.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050780 | MS.gene051493 | 0.80113 | 1.04E-48 | -1.69E-46 |
| MS.gene051492 | MS.gene051493 | 0.842816 | 2.05E-58 | -1.69E-46 |
| MS.gene051493 | MS.gene051494 | 0.880569 | 4.93E-70 | -1.69E-46 |
| MS.gene051493 | MS.gene053641 | 0.818057 | 2.39E-52 | -1.69E-46 |
| MS.gene051493 | MS.gene053643 | 0.828173 | 1.04E-54 | -1.69E-46 |
| MS.gene051493 | MS.gene053647 | 0.803779 | 2.96E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene058476 | 0.83771 | 4.43E-57 | -1.69E-46 |
| MS.gene051493 | MS.gene058477 | 0.826897 | 2.11E-54 | -1.69E-46 |
| MS.gene051493 | MS.gene06539 | 0.802307 | 5.97E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene065752 | 0.807294 | 5.42E-50 | -1.69E-46 |
| MS.gene051493 | MS.gene071464 | 0.802546 | 5.33E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene09339 | 0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene20887 | 0.827828 | 1.26E-54 | -1.69E-46 |
| MS.gene051493 | MS.gene23193 | 0.805531 | 1.28E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene27493 | 0.830966 | 2.18E-55 | -1.69E-46 |
| MS.gene051493 | MS.gene28156 | 0.821516 | 3.87E-53 | -1.69E-46 |
| MS.gene051493 | MS.gene29485 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene051493 | MS.gene33107 | 0.878782 | 2.13E-69 | -1.69E-46 |
| MS.gene051493 | MS.gene33108 | 0.85791 | 1.18E-62 | -1.69E-46 |
| MS.gene051493 | MS.gene33109 | 0.828046 | 1.12E-54 | -1.69E-46 |
| MS.gene051493 | MS.gene40121 | 0.849488 | 3.13E-60 | -1.69E-46 |
| MS.gene051493 | MS.gene40123 | 0.860734 | 1.68E-63 | -1.69E-46 |
| MS.gene051493 | MS.gene40126 | 0.80474 | 1.87E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene54110 | 0.825848 | 3.75E-54 | -1.69E-46 |
| MS.gene051493 | MS.gene54111 | 0.802079 | 6.65E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene57615 | 0.806008 | 1.01E-49 | -1.69E-46 |
| MS.gene051493 | MS.gene59132 | 0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene051493 | MS.gene62931 | 0.843619 | 1.25E-58 | -1.69E-46 |
| MS.gene051493 | MS.gene70712 | 0.807871 | 4.09E-50 | -1.69E-46 |
| MS.gene051493 | MS.gene71493 | 0.813925 | 2.00E-51 | -1.69E-46 |
| MS.gene051493 | MS.gene71495 | 0.845728 | 3.39E-59 | -1.69E-46 |
| MS.gene051493 | MS.gene84636 | 0.800688 | 1.28E-48 | -1.69E-46 |
| MS.gene051493 | MS.gene87692 | 0.813957 | 1.97E-51 | -1.69E-46 |
| MS.gene051493 | MS.gene92756 | 0.820731 | 5.87E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051493.t1 | MTR_1g013760 | 95.789 | 285 | 11 | 1 | 1 | 284 | 1 | 285 | 0.0 | 566 |
| MS.gene051493.t1 | MTR_3g106060 | 59.122 | 296 | 90 | 9 | 1 | 275 | 1 | 286 | 1.34e-103 | 304 |
| MS.gene051493.t1 | MTR_2g105060 | 47.727 | 264 | 118 | 7 | 24 | 275 | 58 | 313 | 4.34e-66 | 209 |
| MS.gene051493.t1 | MTR_2g105060 | 46.939 | 245 | 110 | 7 | 43 | 275 | 2 | 238 | 1.56e-58 | 187 |
| MS.gene051493.t1 | MTR_4g007060 | 42.182 | 275 | 124 | 8 | 25 | 275 | 17 | 280 | 1.18e-52 | 173 |
| MS.gene051493.t1 | MTR_4g007060 | 42.182 | 275 | 124 | 8 | 25 | 275 | 51 | 314 | 3.03e-52 | 173 |
| MS.gene051493.t1 | MTR_1g013790 | 43.500 | 200 | 86 | 7 | 90 | 276 | 53 | 238 | 2.10e-41 | 143 |
| MS.gene051493.t1 | MTR_7g110720 | 28.448 | 348 | 153 | 9 | 6 | 274 | 71 | 401 | 4.64e-30 | 117 |
| MS.gene051493.t1 | MTR_7g110720 | 27.628 | 333 | 148 | 7 | 6 | 274 | 71 | 374 | 4.60e-29 | 114 |
| MS.gene051493.t1 | MTR_4g007060 | 42.593 | 162 | 76 | 3 | 25 | 179 | 51 | 202 | 1.50e-28 | 109 |
| MS.gene051493.t1 | MTR_2g023930 | 33.333 | 213 | 98 | 4 | 28 | 196 | 150 | 362 | 2.84e-27 | 110 |
| MS.gene051493.t1 | MTR_3g053330 | 33.010 | 206 | 80 | 5 | 124 | 271 | 236 | 441 | 2.26e-25 | 105 |
| MS.gene051493.t1 | MTR_4g132430 | 30.332 | 211 | 98 | 5 | 25 | 196 | 118 | 318 | 2.97e-24 | 102 |
| MS.gene051493.t1 | MTR_4g107970 | 57.333 | 75 | 32 | 0 | 122 | 196 | 161 | 235 | 5.24e-24 | 101 |
| MS.gene051493.t1 | MTR_4g107970 | 57.333 | 75 | 32 | 0 | 122 | 196 | 238 | 312 | 5.75e-24 | 101 |
| MS.gene051493.t1 | MTR_4g094412 | 52.564 | 78 | 37 | 0 | 119 | 196 | 214 | 291 | 6.95e-24 | 100 |
| MS.gene051493.t1 | MTR_4g094412 | 52.564 | 78 | 37 | 0 | 119 | 196 | 223 | 300 | 7.08e-24 | 100 |
| MS.gene051493.t1 | MTR_7g009730 | 46.739 | 92 | 49 | 0 | 122 | 213 | 202 | 293 | 1.61e-23 | 100 |
| MS.gene051493.t1 | MTR_2g045360 | 40.323 | 124 | 63 | 3 | 91 | 205 | 156 | 277 | 4.44e-23 | 98.2 |
| MS.gene051493.t1 | MTR_2g088000 | 48.889 | 90 | 46 | 0 | 124 | 213 | 334 | 423 | 5.81e-23 | 98.6 |
| MS.gene051493.t1 | MTR_4g132430 | 50.000 | 82 | 41 | 0 | 124 | 205 | 112 | 193 | 3.83e-22 | 94.7 |
| MS.gene051493.t1 | MTR_4g049760 | 43.000 | 100 | 57 | 0 | 116 | 215 | 267 | 366 | 2.24e-21 | 94.0 |
| MS.gene051493.t1 | MTR_4g049790 | 45.652 | 92 | 50 | 0 | 124 | 215 | 297 | 388 | 1.57e-20 | 91.7 |
| MS.gene051493.t1 | MTR_3g056100 | 34.483 | 145 | 82 | 5 | 62 | 196 | 330 | 471 | 3.16e-20 | 90.9 |
| MS.gene051493.t1 | MTR_3g056100 | 34.483 | 145 | 82 | 5 | 62 | 196 | 186 | 327 | 4.03e-20 | 90.1 |
| MS.gene051493.t1 | MTR_1g086790 | 41.667 | 96 | 51 | 2 | 123 | 218 | 146 | 236 | 4.57e-20 | 88.6 |
| MS.gene051493.t1 | MTR_3g056100 | 38.793 | 116 | 62 | 4 | 87 | 196 | 202 | 314 | 6.31e-20 | 89.4 |
| MS.gene051493.t1 | MTR_3g056100 | 38.793 | 116 | 62 | 4 | 87 | 196 | 346 | 458 | 6.62e-20 | 89.7 |
| MS.gene051493.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 231 | 286 | 1.95e-19 | 87.8 |
| MS.gene051493.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 253 | 308 | 1.95e-19 | 87.8 |
| MS.gene051493.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 365 | 420 | 2.43e-19 | 88.2 |
| MS.gene051493.t1 | MTR_5g097490 | 52.703 | 74 | 32 | 2 | 124 | 197 | 239 | 309 | 3.37e-19 | 87.0 |
| MS.gene051493.t1 | MTR_5g091390 | 47.297 | 74 | 34 | 2 | 123 | 196 | 145 | 213 | 4.82e-19 | 85.5 |
| MS.gene051493.t1 | MTR_4g094588 | 57.895 | 57 | 23 | 1 | 140 | 196 | 179 | 234 | 5.62e-19 | 85.9 |
| MS.gene051493.t1 | MTR_7g109800 | 48.052 | 77 | 37 | 2 | 120 | 196 | 128 | 201 | 6.49e-19 | 85.1 |
| MS.gene051493.t1 | MTR_5g016610 | 52.632 | 57 | 27 | 0 | 140 | 196 | 200 | 256 | 9.15e-19 | 84.0 |
| MS.gene051493.t1 | MTR_1g009613 | 36.538 | 104 | 55 | 1 | 93 | 196 | 227 | 319 | 1.36e-18 | 84.7 |
| MS.gene051493.t1 | MTR_4g094908 | 49.231 | 65 | 33 | 0 | 140 | 204 | 267 | 331 | 2.02e-18 | 84.3 |
| MS.gene051493.t1 | MTR_5g043880 | 47.297 | 74 | 34 | 2 | 123 | 196 | 112 | 180 | 2.06e-18 | 83.2 |
| MS.gene051493.t1 | MTR_3g104750 | 46.053 | 76 | 38 | 2 | 121 | 196 | 88 | 160 | 2.22e-18 | 80.5 |
| MS.gene051493.t1 | MTR_1g070455 | 47.945 | 73 | 36 | 1 | 127 | 197 | 279 | 351 | 3.02e-18 | 84.0 |
| MS.gene051493.t1 | MTR_7g100510 | 50.746 | 67 | 32 | 1 | 130 | 196 | 352 | 417 | 4.15e-18 | 84.0 |
| MS.gene051493.t1 | MTR_7g100510 | 53.125 | 64 | 28 | 2 | 140 | 203 | 190 | 251 | 4.69e-16 | 78.2 |
| MS.gene051493.t1 | MTR_2g033820 | 47.297 | 74 | 34 | 2 | 123 | 196 | 191 | 259 | 4.20e-18 | 83.6 |
| MS.gene051493.t1 | MTR_5g074400 | 47.945 | 73 | 35 | 2 | 124 | 196 | 407 | 476 | 4.34e-18 | 84.3 |
| MS.gene051493.t1 | MTR_5g074400 | 50.877 | 57 | 26 | 2 | 140 | 196 | 244 | 298 | 1.69e-13 | 70.9 |
| MS.gene051493.t1 | MTR_5g042920 | 47.945 | 73 | 35 | 2 | 124 | 196 | 307 | 376 | 5.84e-18 | 83.6 |
| MS.gene051493.t1 | MTR_5g042920 | 52.632 | 57 | 25 | 2 | 140 | 196 | 152 | 206 | 1.64e-13 | 70.5 |
| MS.gene051493.t1 | MTR_4g082580 | 46.341 | 82 | 38 | 3 | 115 | 196 | 259 | 334 | 9.67e-18 | 82.8 |
| MS.gene051493.t1 | MTR_4g082580 | 47.368 | 57 | 29 | 1 | 140 | 196 | 146 | 201 | 8.40e-11 | 62.4 |
| MS.gene051493.t1 | MTR_7g011820 | 47.945 | 73 | 35 | 2 | 124 | 196 | 397 | 466 | 2.37e-17 | 82.0 |
| MS.gene051493.t1 | MTR_7g011820 | 49.123 | 57 | 27 | 2 | 140 | 196 | 229 | 283 | 2.67e-11 | 63.9 |
| MS.gene051493.t1 | MTR_3g031220 | 46.575 | 73 | 36 | 2 | 124 | 196 | 352 | 421 | 4.98e-17 | 81.3 |
| MS.gene051493.t1 | MTR_3g031220 | 50.877 | 57 | 26 | 2 | 140 | 196 | 199 | 253 | 4.15e-13 | 69.3 |
| MS.gene051493.t1 | MTR_7g062220 | 56.140 | 57 | 24 | 1 | 140 | 196 | 125 | 180 | 7.67e-17 | 79.3 |
| MS.gene051493.t1 | MTR_8g087000 | 51.724 | 58 | 28 | 0 | 140 | 197 | 78 | 135 | 8.55e-17 | 78.2 |
| MS.gene051493.t1 | MTR_8g087000 | 51.724 | 58 | 28 | 0 | 140 | 197 | 77 | 134 | 8.85e-17 | 78.2 |
| MS.gene051493.t1 | MTR_0117s0040 | 52.632 | 57 | 27 | 0 | 140 | 196 | 75 | 131 | 1.66e-16 | 77.4 |
| MS.gene051493.t1 | MTR_1g015140 | 50.877 | 57 | 27 | 1 | 140 | 196 | 103 | 158 | 1.67e-16 | 75.5 |
| MS.gene051493.t1 | MTR_4g013260 | 41.304 | 92 | 48 | 3 | 105 | 196 | 307 | 392 | 2.02e-16 | 79.3 |
| MS.gene051493.t1 | MTR_4g013260 | 41.026 | 78 | 45 | 1 | 140 | 217 | 185 | 261 | 3.82e-13 | 69.7 |
| MS.gene051493.t1 | MTR_7g079010 | 50.000 | 66 | 32 | 1 | 140 | 205 | 142 | 206 | 2.05e-16 | 76.6 |
| MS.gene051493.t1 | MTR_2g024350 | 34.426 | 122 | 73 | 3 | 140 | 254 | 9 | 130 | 2.21e-16 | 76.6 |
| MS.gene051493.t1 | MTR_3g009470 | 34.921 | 126 | 70 | 4 | 124 | 240 | 482 | 604 | 2.34e-16 | 79.3 |
| MS.gene051493.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 281 | 335 | 7.38e-12 | 65.9 |
| MS.gene051493.t1 | MTR_3g108960 | 52.632 | 57 | 27 | 0 | 140 | 196 | 315 | 371 | 2.68e-16 | 78.6 |
| MS.gene051493.t1 | MTR_4g127040 | 50.000 | 58 | 29 | 0 | 140 | 197 | 246 | 303 | 3.88e-16 | 77.4 |
| MS.gene051493.t1 | MTR_8g092140 | 52.632 | 57 | 26 | 1 | 140 | 196 | 161 | 216 | 3.98e-16 | 76.3 |
| MS.gene051493.t1 | MTR_2g016770 | 49.123 | 57 | 29 | 0 | 140 | 196 | 36 | 92 | 4.05e-16 | 75.9 |
| MS.gene051493.t1 | MTR_3g095080 | 52.632 | 57 | 26 | 1 | 140 | 196 | 145 | 200 | 4.13e-16 | 75.9 |
| MS.gene051493.t1 | MTR_7g028415 | 51.613 | 62 | 29 | 1 | 140 | 201 | 94 | 154 | 4.15e-16 | 74.7 |
| MS.gene051493.t1 | MTR_7g028710 | 51.613 | 62 | 29 | 1 | 140 | 201 | 94 | 154 | 4.15e-16 | 74.7 |
| MS.gene051493.t1 | MTR_7g080020 | 32.919 | 161 | 90 | 7 | 113 | 262 | 466 | 619 | 4.69e-16 | 78.6 |
| MS.gene051493.t1 | MTR_7g080000 | 33.333 | 129 | 80 | 3 | 71 | 196 | 363 | 488 | 4.75e-16 | 78.6 |
| MS.gene051493.t1 | MTR_3g095080 | 52.632 | 57 | 26 | 1 | 140 | 196 | 169 | 224 | 4.88e-16 | 76.3 |
| MS.gene051493.t1 | MTR_2g016770 | 49.123 | 57 | 29 | 0 | 140 | 196 | 28 | 84 | 5.05e-16 | 75.5 |
| MS.gene051493.t1 | MTR_7g071120 | 45.205 | 73 | 37 | 2 | 124 | 196 | 311 | 380 | 6.11e-16 | 77.8 |
| MS.gene051493.t1 | MTR_7g071120 | 47.368 | 57 | 28 | 2 | 140 | 196 | 167 | 221 | 5.78e-11 | 63.2 |
| MS.gene051493.t1 | MTR_4g122530 | 45.205 | 73 | 37 | 2 | 124 | 196 | 195 | 264 | 9.43e-16 | 77.0 |
| MS.gene051493.t1 | MTR_1g077780 | 41.026 | 78 | 43 | 2 | 119 | 196 | 44 | 118 | 1.82e-15 | 72.4 |
| MS.gene051493.t1 | MTR_8g007270 | 52.632 | 57 | 26 | 1 | 140 | 196 | 155 | 210 | 1.90e-15 | 73.9 |
| MS.gene051493.t1 | MTR_8g096730 | 43.939 | 66 | 36 | 1 | 140 | 205 | 71 | 135 | 2.51e-15 | 72.0 |
| MS.gene051493.t1 | MTR_2g083870 | 52.632 | 57 | 27 | 0 | 140 | 196 | 81 | 137 | 3.37e-15 | 73.9 |
| MS.gene051493.t1 | MTR_2g024380 | 33.613 | 119 | 72 | 3 | 140 | 251 | 252 | 370 | 3.69e-15 | 75.5 |
| MS.gene051493.t1 | MTR_4g130900 | 50.877 | 57 | 27 | 1 | 140 | 196 | 360 | 415 | 8.37e-15 | 74.7 |
| MS.gene051493.t1 | MTR_4g047580 | 36.957 | 92 | 58 | 0 | 124 | 215 | 266 | 357 | 1.54e-14 | 73.9 |
| MS.gene051493.t1 | MTR_2g032030 | 42.857 | 77 | 39 | 1 | 125 | 196 | 248 | 324 | 1.69e-14 | 73.6 |
| MS.gene051493.t1 | MTR_2g032030 | 42.857 | 77 | 39 | 1 | 125 | 196 | 248 | 324 | 1.73e-14 | 73.6 |
| MS.gene051493.t1 | MTR_8g098945 | 43.478 | 69 | 39 | 0 | 140 | 208 | 130 | 198 | 2.07e-14 | 72.0 |
| MS.gene051493.t1 | MTR_3g095040 | 49.123 | 57 | 28 | 1 | 140 | 196 | 119 | 174 | 4.43e-14 | 69.7 |
| MS.gene051493.t1 | MTR_8g028565 | 38.554 | 83 | 50 | 1 | 140 | 222 | 156 | 237 | 4.52e-14 | 71.6 |
| MS.gene051493.t1 | MTR_7g109600 | 47.368 | 57 | 30 | 0 | 140 | 196 | 54 | 110 | 9.35e-14 | 70.1 |
| MS.gene051493.t1 | MTR_7g079040 | 47.368 | 57 | 30 | 0 | 140 | 196 | 155 | 211 | 1.58e-13 | 70.1 |
| MS.gene051493.t1 | MTR_8g092010 | 45.614 | 57 | 30 | 1 | 140 | 196 | 109 | 164 | 1.75e-13 | 67.8 |
| MS.gene051493.t1 | MTR_3g031220 | 50.877 | 57 | 26 | 2 | 140 | 196 | 199 | 253 | 2.98e-13 | 69.7 |
| MS.gene051493.t1 | MTR_1g099600 | 36.842 | 76 | 48 | 0 | 140 | 215 | 186 | 261 | 3.27e-13 | 68.9 |
| MS.gene051493.t1 | MTR_6g086555 | 38.636 | 88 | 48 | 4 | 111 | 197 | 182 | 264 | 3.94e-13 | 69.3 |
| MS.gene051493.t1 | MTR_1g078260 | 41.333 | 75 | 40 | 3 | 124 | 197 | 234 | 305 | 7.08e-13 | 68.9 |
| MS.gene051493.t1 | MTR_8g099350 | 50.877 | 57 | 26 | 1 | 140 | 194 | 133 | 189 | 4.73e-12 | 65.9 |
| MS.gene051493.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 281 | 335 | 8.33e-12 | 65.5 |
| MS.gene051493.t1 | MTR_3g090860 | 50.877 | 57 | 26 | 1 | 140 | 194 | 134 | 190 | 8.49e-12 | 65.1 |
| MS.gene051493.t1 | MTR_5g097500 | 46.479 | 71 | 36 | 2 | 126 | 196 | 218 | 286 | 9.19e-12 | 64.7 |
| MS.gene051493.t1 | MTR_5g067680 | 49.123 | 57 | 27 | 1 | 140 | 194 | 203 | 259 | 9.38e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051493.t1 | AT1G80840 | 42.809 | 299 | 134 | 9 | 3 | 274 | 6 | 294 | 4.88e-69 | 216 |
| MS.gene051493.t1 | AT2G25000 | 42.222 | 270 | 110 | 7 | 19 | 278 | 36 | 269 | 2.62e-61 | 195 |
| MS.gene051493.t1 | AT2G25000 | 42.366 | 262 | 108 | 6 | 24 | 278 | 1 | 226 | 3.31e-61 | 194 |
| MS.gene051493.t1 | AT2G25000 | 42.366 | 262 | 108 | 6 | 24 | 278 | 1 | 226 | 3.31e-61 | 194 |
| MS.gene051493.t1 | AT4G31800 | 43.911 | 271 | 124 | 7 | 25 | 278 | 49 | 308 | 6.76e-61 | 196 |
| MS.gene051493.t1 | AT2G25000 | 42.264 | 265 | 110 | 6 | 21 | 278 | 20 | 248 | 1.24e-60 | 193 |
| MS.gene051493.t1 | AT4G31800 | 54.706 | 170 | 67 | 4 | 111 | 278 | 82 | 243 | 7.32e-54 | 175 |
| MS.gene051493.t1 | AT4G31800 | 44.048 | 168 | 75 | 4 | 25 | 176 | 49 | 213 | 3.26e-33 | 122 |
| MS.gene051493.t1 | AT4G01720 | 33.503 | 197 | 98 | 4 | 28 | 196 | 105 | 296 | 2.86e-24 | 102 |
| MS.gene051493.t1 | AT4G04450 | 48.913 | 92 | 47 | 0 | 124 | 215 | 183 | 274 | 5.39e-24 | 100 |
| MS.gene051493.t1 | AT4G04450 | 48.913 | 92 | 47 | 0 | 124 | 215 | 277 | 368 | 1.31e-23 | 100 |
| MS.gene051493.t1 | AT1G62300 | 30.952 | 210 | 107 | 5 | 25 | 196 | 160 | 369 | 1.72e-23 | 100 |
| MS.gene051493.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.02e-23 | 99.0 |
| MS.gene051493.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.02e-23 | 99.0 |
| MS.gene051493.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.02e-23 | 99.0 |
| MS.gene051493.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 4.02e-23 | 99.0 |
| MS.gene051493.t1 | AT1G68150 | 49.425 | 87 | 44 | 0 | 124 | 210 | 220 | 306 | 4.20e-23 | 97.8 |
| MS.gene051493.t1 | AT5G15130 | 52.703 | 74 | 35 | 0 | 140 | 213 | 186 | 259 | 3.26e-22 | 96.3 |
| MS.gene051493.t1 | AT5G15130 | 52.703 | 74 | 35 | 0 | 140 | 213 | 228 | 301 | 4.74e-22 | 95.9 |
| MS.gene051493.t1 | AT1G18860 | 64.912 | 57 | 20 | 0 | 140 | 196 | 240 | 296 | 1.42e-21 | 94.7 |
| MS.gene051493.t1 | AT1G64000 | 53.030 | 66 | 30 | 1 | 140 | 205 | 115 | 179 | 2.56e-19 | 84.0 |
| MS.gene051493.t1 | AT1G29860 | 53.333 | 60 | 27 | 1 | 137 | 196 | 134 | 192 | 7.02e-19 | 84.7 |
| MS.gene051493.t1 | AT4G18170 | 53.333 | 60 | 27 | 1 | 137 | 196 | 170 | 228 | 7.48e-19 | 85.1 |
| MS.gene051493.t1 | AT2G04880 | 57.627 | 59 | 24 | 1 | 138 | 196 | 282 | 339 | 1.08e-18 | 85.9 |
| MS.gene051493.t1 | AT5G41570 | 53.030 | 66 | 30 | 1 | 140 | 205 | 99 | 163 | 1.19e-18 | 82.0 |
| MS.gene051493.t1 | AT2G04880 | 57.627 | 59 | 24 | 1 | 138 | 196 | 306 | 363 | 1.22e-18 | 85.9 |
| MS.gene051493.t1 | AT2G47260 | 55.000 | 60 | 26 | 1 | 137 | 196 | 172 | 230 | 1.62e-18 | 84.3 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 1.95e-18 | 84.7 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 1.95e-18 | 84.7 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 1.95e-18 | 84.7 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 192 | 261 | 1.95e-18 | 84.7 |
| MS.gene051493.t1 | AT5G26170 | 50.877 | 57 | 27 | 1 | 140 | 196 | 114 | 169 | 2.10e-18 | 80.9 |
| MS.gene051493.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.34e-18 | 82.0 |
| MS.gene051493.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.36e-13 | 68.2 |
| MS.gene051493.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.34e-18 | 82.0 |
| MS.gene051493.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.36e-13 | 68.2 |
| MS.gene051493.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.34e-18 | 82.0 |
| MS.gene051493.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.36e-13 | 68.2 |
| MS.gene051493.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 2.34e-18 | 82.0 |
| MS.gene051493.t1 | AT5G07100 | 45.070 | 71 | 38 | 1 | 126 | 196 | 11 | 80 | 2.36e-13 | 68.2 |
| MS.gene051493.t1 | AT1G13960 | 47.945 | 73 | 35 | 2 | 124 | 196 | 243 | 312 | 2.89e-18 | 84.0 |
| MS.gene051493.t1 | AT1G13960 | 50.877 | 57 | 26 | 2 | 140 | 196 | 77 | 131 | 1.82e-12 | 67.4 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 296 | 365 | 3.54e-18 | 84.3 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 328 | 397 | 3.63e-18 | 84.7 |
| MS.gene051493.t1 | AT4G26640 | 49.315 | 73 | 34 | 2 | 124 | 196 | 368 | 437 | 3.67e-18 | 84.7 |
| MS.gene051493.t1 | AT1G13960 | 47.945 | 73 | 35 | 2 | 124 | 196 | 396 | 465 | 4.70e-18 | 84.3 |
| MS.gene051493.t1 | AT1G13960 | 50.877 | 57 | 26 | 2 | 140 | 196 | 230 | 284 | 1.99e-12 | 67.4 |
| MS.gene051493.t1 | AT2G03340 | 47.945 | 73 | 35 | 2 | 124 | 196 | 402 | 471 | 4.88e-18 | 84.3 |
| MS.gene051493.t1 | AT2G03340 | 50.877 | 57 | 26 | 2 | 140 | 196 | 251 | 305 | 3.05e-13 | 70.1 |
| MS.gene051493.t1 | AT5G46350 | 47.222 | 72 | 33 | 2 | 125 | 196 | 173 | 239 | 5.81e-18 | 82.8 |
| MS.gene051493.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 194 | 290 | 8.33e-18 | 82.0 |
| MS.gene051493.t1 | AT5G07100 | 42.308 | 78 | 44 | 1 | 126 | 203 | 104 | 180 | 6.54e-13 | 68.2 |
| MS.gene051493.t1 | AT4G31550 | 44.928 | 69 | 38 | 0 | 140 | 208 | 246 | 314 | 1.06e-17 | 82.0 |
| MS.gene051493.t1 | AT4G31550 | 44.928 | 69 | 38 | 0 | 140 | 208 | 247 | 315 | 1.09e-17 | 82.0 |
| MS.gene051493.t1 | AT5G49520 | 54.386 | 57 | 25 | 1 | 140 | 196 | 222 | 277 | 1.31e-17 | 82.4 |
| MS.gene051493.t1 | AT2G30590 | 52.632 | 57 | 27 | 0 | 140 | 196 | 314 | 370 | 2.12e-17 | 81.6 |
| MS.gene051493.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 2.23e-17 | 80.5 |
| MS.gene051493.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 2.23e-17 | 80.5 |
| MS.gene051493.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 2.23e-17 | 80.5 |
| MS.gene051493.t1 | AT1G69810 | 50.000 | 74 | 36 | 1 | 124 | 196 | 130 | 203 | 2.46e-17 | 80.9 |
| MS.gene051493.t1 | AT5G28650 | 44.186 | 86 | 40 | 2 | 127 | 210 | 248 | 327 | 2.68e-17 | 80.9 |
| MS.gene051493.t1 | AT2G23320 | 49.123 | 57 | 29 | 0 | 140 | 196 | 241 | 297 | 2.71e-17 | 80.9 |
| MS.gene051493.t1 | AT1G69810 | 50.000 | 74 | 36 | 1 | 124 | 196 | 188 | 261 | 3.22e-17 | 81.3 |
| MS.gene051493.t1 | AT5G56270 | 47.945 | 73 | 35 | 2 | 124 | 196 | 474 | 543 | 3.44e-17 | 82.0 |
| MS.gene051493.t1 | AT5G56270 | 50.877 | 57 | 26 | 2 | 140 | 196 | 274 | 328 | 3.55e-11 | 63.9 |
| MS.gene051493.t1 | AT3G62340 | 51.562 | 64 | 30 | 1 | 133 | 196 | 112 | 174 | 3.66e-17 | 79.7 |
| MS.gene051493.t1 | AT5G13080 | 53.226 | 62 | 28 | 1 | 140 | 201 | 68 | 128 | 4.80e-17 | 76.6 |
| MS.gene051493.t1 | AT3G01080 | 46.575 | 73 | 36 | 2 | 124 | 196 | 293 | 362 | 6.91e-17 | 80.5 |
| MS.gene051493.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 168 | 222 | 8.97e-11 | 62.4 |
| MS.gene051493.t1 | AT3G01080 | 46.575 | 73 | 36 | 2 | 124 | 196 | 331 | 400 | 6.96e-17 | 80.5 |
| MS.gene051493.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 206 | 260 | 7.85e-11 | 62.8 |
| MS.gene051493.t1 | AT1G29280 | 50.877 | 57 | 28 | 0 | 140 | 196 | 75 | 131 | 1.13e-16 | 78.2 |
| MS.gene051493.t1 | AT2G24570 | 50.877 | 57 | 28 | 0 | 140 | 196 | 244 | 300 | 1.39e-16 | 79.0 |
| MS.gene051493.t1 | AT3G04670 | 44.444 | 72 | 38 | 1 | 127 | 196 | 248 | 319 | 1.42e-16 | 79.0 |
| MS.gene051493.t1 | AT2G38470 | 45.205 | 73 | 37 | 2 | 124 | 196 | 349 | 418 | 2.26e-16 | 79.3 |
| MS.gene051493.t1 | AT2G38470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 185 | 239 | 3.98e-13 | 69.7 |
| MS.gene051493.t1 | AT4G24240 | 46.552 | 58 | 31 | 0 | 140 | 197 | 282 | 339 | 4.39e-16 | 77.8 |
| MS.gene051493.t1 | AT4G30935 | 52.632 | 57 | 26 | 1 | 140 | 196 | 332 | 387 | 8.19e-16 | 77.4 |
| MS.gene051493.t1 | AT2G44745 | 52.632 | 57 | 26 | 1 | 140 | 196 | 146 | 201 | 8.62e-16 | 75.1 |
| MS.gene051493.t1 | AT2G30250 | 45.205 | 73 | 37 | 2 | 124 | 196 | 315 | 384 | 1.61e-15 | 76.3 |
| MS.gene051493.t1 | AT2G30250 | 49.123 | 57 | 27 | 2 | 140 | 196 | 167 | 221 | 5.21e-11 | 63.2 |
| MS.gene051493.t1 | AT3G01970 | 49.180 | 61 | 30 | 1 | 140 | 200 | 66 | 125 | 3.15e-15 | 71.6 |
| MS.gene051493.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 259 | 325 | 4.00e-15 | 75.1 |
| MS.gene051493.t1 | AT2G37260 | 46.479 | 71 | 36 | 2 | 126 | 196 | 72 | 140 | 5.39e-15 | 74.7 |
| MS.gene051493.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 257 | 323 | 4.07e-15 | 74.7 |
| MS.gene051493.t1 | AT2G37260 | 46.479 | 71 | 36 | 2 | 126 | 196 | 70 | 138 | 5.37e-15 | 74.7 |
| MS.gene051493.t1 | AT1G55600 | 52.632 | 57 | 26 | 1 | 140 | 196 | 308 | 363 | 4.36e-15 | 75.5 |
| MS.gene051493.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 339 | 405 | 4.49e-15 | 75.1 |
| MS.gene051493.t1 | AT2G37260 | 46.479 | 71 | 36 | 2 | 126 | 196 | 152 | 220 | 6.36e-15 | 74.7 |
| MS.gene051493.t1 | AT4G39410 | 50.877 | 57 | 27 | 1 | 140 | 196 | 224 | 279 | 5.17e-15 | 74.3 |
| MS.gene051493.t1 | AT2G21900 | 44.444 | 72 | 38 | 2 | 126 | 196 | 95 | 165 | 8.15e-15 | 72.0 |
| MS.gene051493.t1 | AT2G34830 | 47.692 | 65 | 34 | 0 | 132 | 196 | 208 | 272 | 8.54e-15 | 74.3 |
| MS.gene051493.t1 | AT2G34830 | 47.692 | 65 | 34 | 0 | 132 | 196 | 217 | 281 | 9.07e-15 | 74.3 |
| MS.gene051493.t1 | AT1G30650 | 47.692 | 65 | 34 | 0 | 132 | 196 | 210 | 274 | 1.84e-14 | 73.6 |
| MS.gene051493.t1 | AT3G58710 | 49.123 | 57 | 29 | 0 | 140 | 196 | 71 | 127 | 3.32e-14 | 71.2 |
| MS.gene051493.t1 | AT3G58710 | 49.123 | 57 | 29 | 0 | 140 | 196 | 72 | 128 | 3.39e-14 | 71.2 |
| MS.gene051493.t1 | AT5G64810 | 37.805 | 82 | 46 | 3 | 116 | 196 | 89 | 166 | 4.11e-14 | 69.7 |
| MS.gene051493.t1 | AT2G46130 | 50.877 | 57 | 27 | 1 | 140 | 196 | 31 | 86 | 6.78e-14 | 67.0 |
| MS.gene051493.t1 | AT5G52830 | 43.478 | 69 | 39 | 0 | 140 | 208 | 166 | 234 | 8.08e-14 | 71.2 |
| MS.gene051493.t1 | AT4G01250 | 45.614 | 57 | 31 | 0 | 140 | 196 | 129 | 185 | 1.23e-13 | 70.1 |
| MS.gene051493.t1 | AT5G43290 | 40.789 | 76 | 43 | 2 | 121 | 196 | 97 | 170 | 1.40e-13 | 69.7 |
| MS.gene051493.t1 | AT4G26440 | 43.836 | 73 | 38 | 2 | 124 | 196 | 359 | 428 | 1.49e-13 | 70.9 |
| MS.gene051493.t1 | AT4G26440 | 47.368 | 57 | 28 | 2 | 140 | 196 | 179 | 233 | 6.86e-11 | 62.8 |
| MS.gene051493.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 1110 | 1209 | 2.18e-13 | 70.9 |
| MS.gene051493.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 1138 | 1237 | 2.49e-13 | 70.5 |
| MS.gene051493.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 999 | 1098 | 2.49e-13 | 70.5 |
| MS.gene051493.t1 | AT4G23550 | 30.714 | 140 | 88 | 4 | 138 | 275 | 139 | 271 | 5.77e-13 | 68.2 |
| MS.gene051493.t1 | AT1G69310 | 50.877 | 57 | 23 | 2 | 140 | 196 | 148 | 199 | 6.23e-13 | 67.8 |
| MS.gene051493.t1 | AT2G46400 | 40.698 | 86 | 46 | 3 | 111 | 194 | 79 | 161 | 2.49e-12 | 66.2 |
| MS.gene051493.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 206 | 260 | 7.90e-11 | 62.0 |
| MS.gene051493.t1 | AT1G80590 | 44.828 | 58 | 30 | 1 | 139 | 194 | 85 | 142 | 9.94e-11 | 60.8 |
Find 49 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTTCTGGAAGAATTT+TGG | 0.107436 | 1.3:+7959921 | MS.gene051493:CDS |
| GCACTTGCCACTGCTATTTC+TGG | 0.167473 | 1.3:+7959910 | MS.gene051493:CDS |
| AATTGCTGGATAGATGATTT+TGG | 0.173303 | 1.3:-7959835 | None:intergenic |
| TTTGGACCATACTTCTAATA+AGG | 0.232805 | 1.3:+7959939 | MS.gene051493:CDS |
| GTCTTCACCTAAGGCTTATA+AGG | 0.247602 | 1.3:+7958806 | MS.gene051493:CDS |
| GCAAGTGCTGTAGTGAAATT+AGG | 0.319456 | 1.3:-7959895 | None:intergenic |
| CAGAGTGAAGAAGCTCCTTT+AGG | 0.328370 | 1.3:+7959742 | MS.gene051493:CDS |
| GGATATCAATGGAGGAAATA+TGG | 0.328462 | 1.3:+7959009 | MS.gene051493:CDS |
| ATTTGGCCTTATTAGAAGTA+TGG | 0.343403 | 1.3:-7959945 | None:intergenic |
| AATATGTTTGGTAATGTTAG+AGG | 0.347609 | 1.3:+7958705 | MS.gene051493:CDS |
| TACATGGAAATTTCACCATT+TGG | 0.351460 | 1.3:-7959962 | None:intergenic |
| TTGTGAACAGGACGAAGTTT+TGG | 0.359854 | 1.3:+7958509 | MS.gene051493:intron |
| TGGAACATTATCAAGCTTCA+TGG | 0.367214 | 1.3:-7959815 | None:intergenic |
| CCTCTCCTAGAGCTTACTTT+AGG | 0.371319 | 1.3:+7959055 | MS.gene051493:CDS |
| TTGTATACGAACCTTGAGTA+TGG | 0.372911 | 1.3:-7957854 | None:intergenic |
| GAAAGTTGCATCAATATGTT+TGG | 0.406359 | 1.3:+7958693 | MS.gene051493:CDS |
| TATGTTGCAACTAGTATAGT+AGG | 0.431061 | 1.3:-7959664 | None:intergenic |
| TGGAAGGAACATTAACGTTA+AGG | 0.438901 | 1.3:-7957834 | None:intergenic |
| ATGAAGAATCATTAATCAAA+AGG | 0.454669 | 1.3:+7958769 | MS.gene051493:CDS |
| ACAAGAACCTTATAAGCCTT+AGG | 0.486641 | 1.3:-7958813 | None:intergenic |
| CATTAATCAAAAGGCCATGT+AGG | 0.493040 | 1.3:+7958778 | MS.gene051493:CDS |
| AACTGGGCAGCTTGGAGCAT+AGG | 0.506437 | 1.3:-7959082 | None:intergenic |
| ACATTATCAAGCTTCATGGT+TGG | 0.511345 | 1.3:-7959811 | None:intergenic |
| ATACTTCTAATAAGGCCAAA+TGG | 0.514058 | 1.3:+7959947 | MS.gene051493:CDS |
| TAGGGATATGTCTTCACCTA+AGG | 0.525286 | 1.3:+7958797 | MS.gene051493:CDS |
| TAATGTTCCTTCCATACTCA+AGG | 0.525940 | 1.3:+7957843 | MS.gene051493:CDS |
| TTTCAGCTTTCTCATGACCA+TGG | 0.536101 | 1.3:-7959702 | None:intergenic |
| GAGCACCTAAAGTAAGCTCT+AGG | 0.538868 | 1.3:-7959060 | None:intergenic |
| ATTAATCAAAAGGCCATGTA+GGG | 0.538909 | 1.3:+7958779 | MS.gene051493:CDS |
| CCTAAAGTAAGCTCTAGGAG+AGG | 0.548395 | 1.3:-7959055 | None:intergenic |
| CTAAAGGAGCTTCTTCACTC+TGG | 0.548870 | 1.3:-7959741 | None:intergenic |
| GTAACATGAACTGAACCTAA+AGG | 0.560432 | 1.3:-7959757 | None:intergenic |
| GTCTTAGTTCTGAGAACAAG+AGG | 0.567530 | 1.3:+7958547 | MS.gene051493:CDS |
| CTAAAGTAAGCTCTAGGAGA+GGG | 0.569732 | 1.3:-7959054 | None:intergenic |
| TTGTGGTATAAAGTATGTGA+TGG | 0.581181 | 1.3:+7958984 | MS.gene051493:intron |
| ATGGAGGAAATATGGTCAGA+AGG | 0.585738 | 1.3:+7959017 | MS.gene051493:CDS |
| GGTATAAAGTATGTGATGGA+TGG | 0.592987 | 1.3:+7958988 | MS.gene051493:intron |
| ATGTGATGGATGGATATCAA+TGG | 0.593080 | 1.3:+7958998 | MS.gene051493:CDS |
| ATGTTGCAACTAGTATAGTA+GGG | 0.601976 | 1.3:-7959663 | None:intergenic |
| TGCAATGGAATCAACTTGTG+TGG | 0.619908 | 1.3:+7957798 | None:intergenic |
| ATACGAACCTTGAGTATGGA+AGG | 0.630843 | 1.3:-7957850 | None:intergenic |
| GGTGAAGACATATCCCTACA+TGG | 0.630918 | 1.3:-7958792 | None:intergenic |
| GTTCTTTGAATAATTTGTTG+AGG | 0.631715 | 1.3:-7959784 | None:intergenic |
| TAACATGTGTGAGAACTATG+AGG | 0.644714 | 1.3:+7958587 | MS.gene051493:CDS |
| TAAAGTAAGCTCTAGGAGAG+GGG | 0.664718 | 1.3:-7959053 | None:intergenic |
| TGATGGATGGATATCAATGG+AGG | 0.669535 | 1.3:+7959001 | MS.gene051493:CDS |
| ATACTAGTTGCAACATACGA+AGG | 0.673327 | 1.3:+7959670 | MS.gene051493:CDS |
| AATTCTTCCAGAAATAGCAG+TGG | 0.680346 | 1.3:-7959917 | None:intergenic |
| TACGAAGGAGAGCACAACCA+TGG | 0.683428 | 1.3:+7959685 | MS.gene051493:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATTAATTCATAATCA+AGG | + | chr1.3:7958045-7958064 | MS.gene051493:intron | 10.0% |
| !! | AATTGAAAATTAATTAATCA+AGG | - | chr1.3:7958959-7958978 | None:intergenic | 10.0% |
| !! | TATACTAATTTCATTAAAAT+TGG | + | chr1.3:7958412-7958431 | MS.gene051493:intron | 10.0% |
| !!! | TAATTTTCAATTTTTATTTG+TGG | + | chr1.3:7958967-7958986 | MS.gene051493:intron | 10.0% |
| !! | TATATTTATACTAATGATGT+AGG | + | chr1.3:7958255-7958274 | MS.gene051493:intron | 15.0% |
| !! | AAAAATTACACTAGTTAACA+AGG | + | chr1.3:7957930-7957949 | MS.gene051493:intron | 20.0% |
| !! | AAAAATTTGACAAGAACTTT+CGG | + | chr1.3:7959231-7959250 | MS.gene051493:intron | 20.0% |
| !! | ATGAAGAATCATTAATCAAA+AGG | + | chr1.3:7958769-7958788 | MS.gene051493:CDS | 20.0% |
| !! | ATTCTTTCTCATCAATATAT+TGG | - | chr1.3:7959345-7959364 | None:intergenic | 20.0% |
| !!! | ATCAAAATTTGATCTTGTTT+GGG | - | chr1.3:7959601-7959620 | None:intergenic | 20.0% |
| !!! | ATTATTACCTTCTTTTTAAC+TGG | - | chr1.3:7959102-7959121 | None:intergenic | 20.0% |
| !!! | ATTGATGAGAAAGAATTTTA+GGG | + | chr1.3:7959349-7959368 | MS.gene051493:intron | 20.0% |
| !!! | TATTGATGAGAAAGAATTTT+AGG | + | chr1.3:7959348-7959367 | MS.gene051493:intron | 20.0% |
| !!! | TTAATTTTCATGTATGATCA+GGG | + | chr1.3:7957902-7957921 | MS.gene051493:intron | 20.0% |
| !!! | TTATTACCTTCTTTTTAACT+GGG | - | chr1.3:7959101-7959120 | None:intergenic | 20.0% |
| !!! | TTTAATTTTCATGTATGATC+AGG | + | chr1.3:7957901-7957920 | MS.gene051493:intron | 20.0% |
| ! | AAACTTTATAGATTCGTTCA+AGG | - | chr1.3:7957977-7957996 | None:intergenic | 25.0% |
| ! | ATGTTAAGAATACACATGTT+TGG | - | chr1.3:7959161-7959180 | None:intergenic | 25.0% |
| ! | CACTATATATACACCTAAAA+AGG | + | chr1.3:7958315-7958334 | MS.gene051493:intron | 25.0% |
| ! | GATCAAAATTTGATCTTGTT+TGG | - | chr1.3:7959602-7959621 | None:intergenic | 25.0% |
| ! | TCAATCAATCTTAACTACTA+TGG | - | chr1.3:7958223-7958242 | None:intergenic | 25.0% |
| ! | TTTCGATAGAGATTACTAAT+AGG | - | chr1.3:7959214-7959233 | None:intergenic | 25.0% |
| !! | CTCTTGTGTCATTATTAATT+AGG | + | chr1.3:7959621-7959640 | MS.gene051493:intron | 25.0% |
| !! | GTAAACAAATGCTAAGATTT+TGG | + | chr1.3:7959551-7959570 | MS.gene051493:intron | 25.0% |
| !! | TATATGAAAACATGCGATTT+TGG | - | chr1.3:7959270-7959289 | None:intergenic | 25.0% |
| !! | TTTTCTTTGATTGTTGTGTT+TGG | - | chr1.3:7958659-7958678 | None:intergenic | 25.0% |
| !!! | AATATGTTTGGTAATGTTAG+AGG | + | chr1.3:7958705-7958724 | MS.gene051493:CDS | 25.0% |
| !!! | GTTCTTTGAATAATTTGTTG+AGG | - | chr1.3:7959787-7959806 | None:intergenic | 25.0% |
| AGATTACTAATAGGTGAAGT+AGG | - | chr1.3:7959205-7959224 | None:intergenic | 30.0% | |
| ATACTTCTAATAAGGCCAAA+TGG | + | chr1.3:7959947-7959966 | MS.gene051493:CDS | 30.0% | |
| ATGTTGCAACTAGTATAGTA+GGG | - | chr1.3:7959666-7959685 | None:intergenic | 30.0% | |
| ATTAATCAAAAGGCCATGTA+GGG | + | chr1.3:7958779-7958798 | MS.gene051493:CDS | 30.0% | |
| ATTACACTAGTTAACAAGGT+TGG | + | chr1.3:7957934-7957953 | MS.gene051493:intron | 30.0% | |
| GAAAGTTGCATCAATATGTT+TGG | + | chr1.3:7958693-7958712 | MS.gene051493:CDS | 30.0% | |
| TATGTTGCAACTAGTATAGT+AGG | - | chr1.3:7959667-7959686 | None:intergenic | 30.0% | |
| TCAATCTTAACTACTATGGA+TGG | - | chr1.3:7958219-7958238 | None:intergenic | 30.0% | |
| TTGTGGTATAAAGTATGTGA+TGG | + | chr1.3:7958984-7959003 | MS.gene051493:intron | 30.0% | |
| TTTGGACCATACTTCTAATA+AGG | + | chr1.3:7959939-7959958 | MS.gene051493:CDS | 30.0% | |
| TTTGTTGAACCAAAAATTGC+TGG | - | chr1.3:7959852-7959871 | None:intergenic | 30.0% | |
| ! | AATTGCTGGATAGATGATTT+TGG | - | chr1.3:7959838-7959857 | None:intergenic | 30.0% |
| ! | ACATTGGAAATTTTGTGAAC+AGG | + | chr1.3:7958497-7958516 | MS.gene051493:intron | 30.0% |
| ! | ATCATCTATCCAGCAATTTT+TGG | + | chr1.3:7959840-7959859 | MS.gene051493:CDS | 30.0% |
| ! | ATCGCTAATTCAACCTTTTT+AGG | - | chr1.3:7958331-7958350 | None:intergenic | 30.0% |
| ! | CAATGTCACTTAGAAATTCA+GGG | - | chr1.3:7958483-7958502 | None:intergenic | 30.0% |
| ! | CATCAATATATTGGTCTAAG+TGG | - | chr1.3:7959336-7959355 | None:intergenic | 30.0% |
| !! | ATTTGGCCTTATTAGAAGTA+TGG | - | chr1.3:7959948-7959967 | None:intergenic | 30.0% |
| !!! | ACTTAGGGCACAAATTTTTT+TGG | - | chr1.3:7958169-7958188 | None:intergenic | 30.0% |
| !!! | CTTAGGGCACAAATTTTTTT+GGG | - | chr1.3:7958168-7958187 | None:intergenic | 30.0% |
| !!! | GCAATTTTTGGTTCAACAAA+TGG | + | chr1.3:7959852-7959871 | MS.gene051493:CDS | 30.0% |
| !!! | TGCTATTTCTGGAAGAATTT+TGG | + | chr1.3:7959921-7959940 | MS.gene051493:CDS | 30.0% |
| AATTCTTCCAGAAATAGCAG+TGG | - | chr1.3:7959920-7959939 | None:intergenic | 35.0% | |
| AATTTGACAAGAACTTTCGG+TGG | + | chr1.3:7959234-7959253 | MS.gene051493:intron | 35.0% | |
| ACAAGAACCTTATAAGCCTT+AGG | - | chr1.3:7958816-7958835 | None:intergenic | 35.0% | |
| ACATTATCAAGCTTCATGGT+TGG | - | chr1.3:7959814-7959833 | None:intergenic | 35.0% | |
| ATACTAGTTGCAACATACGA+AGG | + | chr1.3:7959670-7959689 | MS.gene051493:CDS | 35.0% | |
| ATTTGACAAGAACTTTCGGT+GGG | + | chr1.3:7959235-7959254 | MS.gene051493:intron | 35.0% | |
| CATTAATCAAAAGGCCATGT+AGG | + | chr1.3:7958778-7958797 | MS.gene051493:CDS | 35.0% | |
| CCTGAATTTCTAAGTGACAT+TGG | + | chr1.3:7958481-7958500 | MS.gene051493:intron | 35.0% | |
| GGATATCAATGGAGGAAATA+TGG | + | chr1.3:7959009-7959028 | MS.gene051493:CDS | 35.0% | |
| GTAACATGAACTGAACCTAA+AGG | - | chr1.3:7959760-7959779 | None:intergenic | 35.0% | |
| TAACATGTGTGAGAACTATG+AGG | + | chr1.3:7958587-7958606 | MS.gene051493:CDS | 35.0% | |
| TAATGTTCCTTCCATACTCA+AGG | + | chr1.3:7957843-7957862 | MS.gene051493:CDS | 35.0% | |
| TGGAACATTATCAAGCTTCA+TGG | - | chr1.3:7959818-7959837 | None:intergenic | 35.0% | |
| TGGAAGGAACATTAACGTTA+AGG | - | chr1.3:7957837-7957856 | None:intergenic | 35.0% | |
| TTACTAATAGGTGAAGTAGG+CGG | - | chr1.3:7959202-7959221 | None:intergenic | 35.0% | |
| TTGTATACGAACCTTGAGTA+TGG | - | chr1.3:7957857-7957876 | None:intergenic | 35.0% | |
| ! | CCAATGTCACTTAGAAATTC+AGG | - | chr1.3:7958484-7958503 | None:intergenic | 35.0% |
| ! | GGTATAAAGTATGTGATGGA+TGG | + | chr1.3:7958988-7959007 | MS.gene051493:intron | 35.0% |
| !! | ATGTGATGGATGGATATCAA+TGG | + | chr1.3:7958998-7959017 | MS.gene051493:CDS | 35.0% |
| !! | TGAAAACATGCGATTTTGGT+AGG | - | chr1.3:7959266-7959285 | None:intergenic | 35.0% |
| AACTACTATGGATGGCCTTT+AGG | - | chr1.3:7958211-7958230 | None:intergenic | 40.0% | |
| AAGCTGCCCAGTTAAAAAGA+AGG | + | chr1.3:7959092-7959111 | MS.gene051493:CDS | 40.0% | |
| ATACGAACCTTGAGTATGGA+AGG | - | chr1.3:7957853-7957872 | None:intergenic | 40.0% | |
| ATGGAGGAAATATGGTCAGA+AGG | + | chr1.3:7959017-7959036 | MS.gene051493:CDS | 40.0% | |
| GTCTTCACCTAAGGCTTATA+AGG | + | chr1.3:7958806-7958825 | MS.gene051493:CDS | 40.0% | |
| TAGGGATATGTCTTCACCTA+AGG | + | chr1.3:7958797-7958816 | MS.gene051493:CDS | 40.0% | |
| TTTCAGCTTTCTCATGACCA+TGG | - | chr1.3:7959705-7959724 | None:intergenic | 40.0% | |
| ! | GCAAGTGCTGTAGTGAAATT+AGG | - | chr1.3:7959898-7959917 | None:intergenic | 40.0% |
| ! | TGATGGATGGATATCAATGG+AGG | + | chr1.3:7959001-7959020 | MS.gene051493:CDS | 40.0% |
| ! | TTGTGAACAGGACGAAGTTT+TGG | + | chr1.3:7958509-7958528 | MS.gene051493:intron | 40.0% |
| !! | CTAAAGTAAGCTCTAGGAGA+GGG | - | chr1.3:7959057-7959076 | None:intergenic | 40.0% |
| !! | GTCTTAGTTCTGAGAACAAG+AGG | + | chr1.3:7958547-7958566 | MS.gene051493:CDS | 40.0% |
| !! | TAAAGTAAGCTCTAGGAGAG+GGG | - | chr1.3:7959056-7959075 | None:intergenic | 40.0% |
| !! | TTCTTTTTAACTGGGCAGCT+TGG | - | chr1.3:7959093-7959112 | None:intergenic | 40.0% |
| ACTATGGATGGCCTTTAGGT+TGG | - | chr1.3:7958207-7958226 | None:intergenic | 45.0% | |
| CAGAGTGAAGAAGCTCCTTT+AGG | + | chr1.3:7959742-7959761 | MS.gene051493:CDS | 45.0% | |
| CCTCTCCTAGAGCTTACTTT+AGG | + | chr1.3:7959055-7959074 | MS.gene051493:CDS | 45.0% | |
| CTAAAGGAGCTTCTTCACTC+TGG | - | chr1.3:7959744-7959763 | None:intergenic | 45.0% | |
| GAGCACCTAAAGTAAGCTCT+AGG | - | chr1.3:7959063-7959082 | None:intergenic | 45.0% | |
| GGTGAAGACATATCCCTACA+TGG | - | chr1.3:7958795-7958814 | None:intergenic | 45.0% | |
| ! | CTATGGATGGCCTTTAGGTT+GGG | - | chr1.3:7958206-7958225 | None:intergenic | 45.0% |
| !! | CCTAAAGTAAGCTCTAGGAG+AGG | - | chr1.3:7959058-7959077 | None:intergenic | 45.0% |
| ! | TACGAAGGAGAGCACAACCA+TGG | + | chr1.3:7959685-7959704 | MS.gene051493:CDS | 50.0% |
| !! | GCACTTGCCACTGCTATTTC+TGG | + | chr1.3:7959910-7959929 | MS.gene051493:CDS | 50.0% |
| AACTGGGCAGCTTGGAGCAT+AGG | - | chr1.3:7959085-7959104 | None:intergenic | 55.0% | |
| GCAGGAGGGGCGGAAACTTA+GGG | - | chr1.3:7958184-7958203 | None:intergenic | 60.0% | |
| !! | GCCTTTAGGTTGGGCAGGAG+GGG | - | chr1.3:7958197-7958216 | None:intergenic | 60.0% |
| !! | GGATGGCCTTTAGGTTGGGC+AGG | - | chr1.3:7958202-7958221 | None:intergenic | 60.0% |
| !! | GGCCTTTAGGTTGGGCAGGA+GGG | - | chr1.3:7958198-7958217 | None:intergenic | 60.0% |
| !! | TGGCCTTTAGGTTGGGCAGG+AGG | - | chr1.3:7958199-7958218 | None:intergenic | 60.0% |
| !! | TTTAGGTTGGGCAGGAGGGG+CGG | - | chr1.3:7958194-7958213 | None:intergenic | 60.0% |
| GCCCCTCCTGCCCAACCTAA+AGG | + | chr1.3:7958193-7958212 | MS.gene051493:intron | 65.0% | |
| GGCAGGAGGGGCGGAAACTT+AGG | - | chr1.3:7958185-7958204 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 7957802 | 7959972 | 7957802 | ID=MS.gene051493 |
| chr1.3 | mRNA | 7957802 | 7959972 | 7957802 | ID=MS.gene051493.t1;Parent=MS.gene051493 |
| chr1.3 | exon | 7957802 | 7957864 | 7957802 | ID=MS.gene051493.t1.exon1;Parent=MS.gene051493.t1 |
| chr1.3 | CDS | 7957802 | 7957864 | 7957802 | ID=cds.MS.gene051493.t1;Parent=MS.gene051493.t1 |
| chr1.3 | exon | 7958519 | 7958863 | 7958519 | ID=MS.gene051493.t1.exon2;Parent=MS.gene051493.t1 |
| chr1.3 | CDS | 7958519 | 7958863 | 7958519 | ID=cds.MS.gene051493.t1;Parent=MS.gene051493.t1 |
| chr1.3 | exon | 7958997 | 7959113 | 7958997 | ID=MS.gene051493.t1.exon3;Parent=MS.gene051493.t1 |
| chr1.3 | CDS | 7958997 | 7959113 | 7958997 | ID=cds.MS.gene051493.t1;Parent=MS.gene051493.t1 |
| chr1.3 | exon | 7959643 | 7959972 | 7959643 | ID=MS.gene051493.t1.exon4;Parent=MS.gene051493.t1 |
| chr1.3 | CDS | 7959643 | 7959972 | 7959643 | ID=cds.MS.gene051493.t1;Parent=MS.gene051493.t1 |
| Gene Sequence |
| Protein sequence |
