Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051494.t1 | XP_003588828.1 | 96.5 | 285 | 9 | 1 | 1 | 284 | 1 | 285 | 2.10E-148 | 535 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051494.t1 | Q9SAH7 | 41.8 | 299 | 137 | 7 | 3 | 274 | 6 | 294 | 1.1e-49 | 198.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051494.t1 | G7I7M7 | 96.5 | 285 | 9 | 1 | 1 | 284 | 1 | 285 | 1.5e-148 | 535.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene051494.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049409 | MS.gene051494 | 0.804945 | 1.69E-49 | -1.69E-46 |
MS.gene051492 | MS.gene051494 | 0.812314 | 4.51E-51 | -1.69E-46 |
MS.gene051493 | MS.gene051494 | 0.880569 | 4.93E-70 | -1.69E-46 |
MS.gene051494 | MS.gene052637 | 0.803748 | 3.01E-49 | -1.69E-46 |
MS.gene051494 | MS.gene053641 | 0.856508 | 3.07E-62 | -1.69E-46 |
MS.gene051494 | MS.gene058475 | 0.800443 | 1.44E-48 | -1.69E-46 |
MS.gene051494 | MS.gene058476 | 0.832389 | 9.72E-56 | -1.69E-46 |
MS.gene051494 | MS.gene058477 | 0.819187 | 1.32E-52 | -1.69E-46 |
MS.gene051494 | MS.gene06539 | 0.801679 | 8.03E-49 | -1.69E-46 |
MS.gene051494 | MS.gene07343 | 0.852378 | 4.80E-61 | -1.69E-46 |
MS.gene051494 | MS.gene09339 | 0.812686 | 3.74E-51 | -1.69E-46 |
MS.gene051494 | MS.gene20887 | 0.842831 | 2.03E-58 | -1.69E-46 |
MS.gene051494 | MS.gene27492 | 0.833184 | 6.17E-56 | -1.69E-46 |
MS.gene051494 | MS.gene27493 | 0.852829 | 3.57E-61 | -1.69E-46 |
MS.gene051494 | MS.gene28156 | 0.808477 | 3.04E-50 | -1.69E-46 |
MS.gene051494 | MS.gene28933 | 0.809081 | 2.26E-50 | -1.69E-46 |
MS.gene051494 | MS.gene33107 | 0.999605 | 0.00E+00 | -1.69E-46 |
MS.gene051494 | MS.gene33108 | 0.838534 | 2.72E-57 | -1.69E-46 |
MS.gene051494 | MS.gene33109 | 0.820036 | 8.48E-53 | -1.69E-46 |
MS.gene051494 | MS.gene40119 | 0.813014 | 3.17E-51 | -1.69E-46 |
MS.gene051494 | MS.gene40121 | 0.813087 | 3.06E-51 | -1.69E-46 |
MS.gene051494 | MS.gene40123 | 0.819535 | 1.10E-52 | -1.69E-46 |
MS.gene051494 | MS.gene40445 | 0.809457 | 1.87E-50 | -1.69E-46 |
MS.gene051494 | MS.gene62931 | 0.801658 | 8.12E-49 | -1.69E-46 |
MS.gene051494 | MS.gene71495 | 0.848792 | 4.89E-60 | -1.69E-46 |
MS.gene051494 | MS.gene87692 | 0.844807 | 6.01E-59 | -1.69E-46 |
MS.gene051494 | MS.gene87693 | 0.83108 | 2.04E-55 | -1.69E-46 |
MS.gene051494 | MS.gene92755 | 0.844023 | 9.77E-59 | -1.69E-46 |
MS.gene051494 | MS.gene92756 | 0.862637 | 4.40E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051494.t1 | MTR_1g013760 | 96.491 | 285 | 9 | 1 | 1 | 284 | 1 | 285 | 0.0 | 570 |
MS.gene051494.t1 | MTR_3g106060 | 58.983 | 295 | 92 | 9 | 1 | 275 | 1 | 286 | 4.61e-102 | 300 |
MS.gene051494.t1 | MTR_2g105060 | 46.494 | 271 | 111 | 5 | 24 | 275 | 58 | 313 | 4.16e-67 | 211 |
MS.gene051494.t1 | MTR_2g105060 | 45.238 | 252 | 104 | 5 | 43 | 275 | 2 | 238 | 1.87e-59 | 189 |
MS.gene051494.t1 | MTR_4g007060 | 41.971 | 274 | 126 | 7 | 25 | 275 | 17 | 280 | 3.87e-52 | 172 |
MS.gene051494.t1 | MTR_4g007060 | 42.014 | 288 | 131 | 9 | 11 | 275 | 40 | 314 | 5.96e-52 | 172 |
MS.gene051494.t1 | MTR_1g013790 | 38.306 | 248 | 122 | 6 | 46 | 276 | 5 | 238 | 4.86e-42 | 145 |
MS.gene051494.t1 | MTR_7g110720 | 29.080 | 337 | 165 | 8 | 6 | 274 | 71 | 401 | 1.59e-31 | 121 |
MS.gene051494.t1 | MTR_7g110720 | 29.042 | 334 | 142 | 8 | 6 | 274 | 71 | 374 | 1.35e-30 | 118 |
MS.gene051494.t1 | MTR_4g007060 | 42.857 | 175 | 82 | 4 | 11 | 179 | 40 | 202 | 3.52e-29 | 111 |
MS.gene051494.t1 | MTR_2g023930 | 32.864 | 213 | 99 | 4 | 28 | 196 | 150 | 362 | 3.28e-27 | 110 |
MS.gene051494.t1 | MTR_3g053330 | 33.010 | 206 | 80 | 5 | 124 | 271 | 236 | 441 | 9.86e-25 | 103 |
MS.gene051494.t1 | MTR_4g132430 | 30.000 | 220 | 105 | 5 | 25 | 205 | 118 | 327 | 1.33e-24 | 103 |
MS.gene051494.t1 | MTR_4g094412 | 52.564 | 78 | 37 | 0 | 119 | 196 | 214 | 291 | 7.44e-24 | 100 |
MS.gene051494.t1 | MTR_4g094412 | 52.564 | 78 | 37 | 0 | 119 | 196 | 223 | 300 | 7.80e-24 | 100 |
MS.gene051494.t1 | MTR_4g107970 | 56.000 | 75 | 33 | 0 | 122 | 196 | 161 | 235 | 1.33e-23 | 100 |
MS.gene051494.t1 | MTR_4g107970 | 56.000 | 75 | 33 | 0 | 122 | 196 | 238 | 312 | 1.56e-23 | 100 |
MS.gene051494.t1 | MTR_2g088000 | 48.889 | 90 | 46 | 0 | 124 | 213 | 334 | 423 | 3.07e-23 | 99.4 |
MS.gene051494.t1 | MTR_7g009730 | 53.333 | 75 | 35 | 0 | 122 | 196 | 202 | 276 | 3.65e-23 | 99.4 |
MS.gene051494.t1 | MTR_2g045360 | 41.739 | 115 | 56 | 3 | 91 | 196 | 156 | 268 | 1.13e-22 | 97.1 |
MS.gene051494.t1 | MTR_4g132430 | 50.000 | 82 | 41 | 0 | 124 | 205 | 112 | 193 | 2.04e-22 | 95.5 |
MS.gene051494.t1 | MTR_4g049760 | 52.055 | 73 | 35 | 0 | 124 | 196 | 275 | 347 | 2.11e-20 | 91.3 |
MS.gene051494.t1 | MTR_4g049790 | 34.337 | 166 | 91 | 4 | 55 | 215 | 236 | 388 | 1.69e-19 | 88.6 |
MS.gene051494.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 231 | 286 | 1.86e-19 | 87.8 |
MS.gene051494.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 253 | 308 | 1.99e-19 | 87.8 |
MS.gene051494.t1 | MTR_5g094430 | 34.862 | 109 | 62 | 3 | 95 | 196 | 37 | 143 | 9.55e-11 | 62.4 |
MS.gene051494.t1 | MTR_1g086790 | 41.667 | 96 | 51 | 2 | 123 | 218 | 146 | 236 | 2.09e-19 | 86.7 |
MS.gene051494.t1 | MTR_5g094430 | 57.895 | 57 | 23 | 1 | 140 | 196 | 365 | 420 | 2.27e-19 | 88.2 |
MS.gene051494.t1 | MTR_3g056100 | 39.286 | 112 | 59 | 4 | 91 | 196 | 219 | 327 | 2.40e-19 | 87.8 |
MS.gene051494.t1 | MTR_3g056100 | 39.286 | 112 | 59 | 4 | 91 | 196 | 206 | 314 | 2.49e-19 | 87.8 |
MS.gene051494.t1 | MTR_3g056100 | 39.286 | 112 | 59 | 4 | 91 | 196 | 350 | 458 | 2.57e-19 | 88.2 |
MS.gene051494.t1 | MTR_3g056100 | 39.286 | 112 | 59 | 4 | 91 | 196 | 363 | 471 | 2.58e-19 | 88.2 |
MS.gene051494.t1 | MTR_5g016610 | 54.386 | 57 | 26 | 0 | 140 | 196 | 200 | 256 | 2.74e-19 | 85.5 |
MS.gene051494.t1 | MTR_7g109800 | 49.351 | 77 | 36 | 2 | 120 | 196 | 128 | 201 | 3.26e-19 | 85.9 |
MS.gene051494.t1 | MTR_5g097490 | 52.703 | 74 | 32 | 2 | 124 | 197 | 239 | 309 | 3.68e-19 | 86.7 |
MS.gene051494.t1 | MTR_5g091390 | 47.297 | 74 | 34 | 2 | 123 | 196 | 145 | 213 | 5.94e-19 | 85.1 |
MS.gene051494.t1 | MTR_4g094588 | 57.895 | 57 | 23 | 1 | 140 | 196 | 179 | 234 | 6.14e-19 | 85.5 |
MS.gene051494.t1 | MTR_5g043880 | 42.308 | 104 | 48 | 4 | 99 | 196 | 83 | 180 | 6.20e-19 | 84.7 |
MS.gene051494.t1 | MTR_4g094908 | 50.769 | 65 | 32 | 0 | 140 | 204 | 267 | 331 | 6.98e-19 | 85.5 |
MS.gene051494.t1 | MTR_1g070455 | 49.315 | 73 | 35 | 1 | 127 | 197 | 279 | 351 | 9.44e-19 | 85.5 |
MS.gene051494.t1 | MTR_1g009613 | 36.538 | 104 | 55 | 1 | 93 | 196 | 227 | 319 | 1.90e-18 | 84.3 |
MS.gene051494.t1 | MTR_5g074400 | 41.935 | 93 | 47 | 4 | 105 | 196 | 390 | 476 | 5.13e-18 | 84.3 |
MS.gene051494.t1 | MTR_5g074400 | 50.877 | 57 | 26 | 2 | 140 | 196 | 244 | 298 | 1.75e-13 | 70.9 |
MS.gene051494.t1 | MTR_7g100510 | 50.746 | 67 | 32 | 1 | 130 | 196 | 352 | 417 | 5.63e-18 | 83.6 |
MS.gene051494.t1 | MTR_7g100510 | 53.333 | 75 | 26 | 4 | 140 | 207 | 190 | 262 | 1.86e-16 | 79.3 |
MS.gene051494.t1 | MTR_3g104750 | 44.737 | 76 | 39 | 2 | 121 | 196 | 88 | 160 | 5.96e-18 | 79.3 |
MS.gene051494.t1 | MTR_2g033820 | 47.297 | 74 | 34 | 2 | 123 | 196 | 191 | 259 | 6.25e-18 | 83.2 |
MS.gene051494.t1 | MTR_4g082580 | 46.341 | 82 | 38 | 3 | 115 | 196 | 259 | 334 | 6.33e-18 | 83.2 |
MS.gene051494.t1 | MTR_5g042920 | 45.122 | 82 | 39 | 3 | 115 | 196 | 301 | 376 | 6.49e-18 | 83.6 |
MS.gene051494.t1 | MTR_5g042920 | 54.386 | 57 | 24 | 2 | 140 | 196 | 152 | 206 | 4.89e-14 | 72.0 |
MS.gene051494.t1 | MTR_7g011820 | 34.127 | 126 | 77 | 3 | 71 | 196 | 347 | 466 | 1.39e-17 | 82.8 |
MS.gene051494.t1 | MTR_7g011820 | 49.123 | 57 | 27 | 2 | 140 | 196 | 229 | 283 | 2.70e-11 | 63.9 |
MS.gene051494.t1 | MTR_7g062220 | 49.333 | 75 | 37 | 1 | 140 | 214 | 125 | 198 | 4.06e-17 | 80.1 |
MS.gene051494.t1 | MTR_3g031220 | 46.575 | 73 | 36 | 2 | 124 | 196 | 352 | 421 | 6.91e-17 | 80.9 |
MS.gene051494.t1 | MTR_3g031220 | 52.632 | 57 | 25 | 2 | 140 | 196 | 199 | 253 | 1.23e-13 | 71.2 |
MS.gene051494.t1 | MTR_8g087000 | 51.724 | 58 | 28 | 0 | 140 | 197 | 78 | 135 | 7.66e-17 | 78.2 |
MS.gene051494.t1 | MTR_8g087000 | 51.724 | 58 | 28 | 0 | 140 | 197 | 77 | 134 | 9.30e-17 | 78.2 |
MS.gene051494.t1 | MTR_1g015140 | 50.877 | 57 | 27 | 1 | 140 | 196 | 103 | 158 | 1.62e-16 | 75.5 |
MS.gene051494.t1 | MTR_0117s0040 | 52.632 | 57 | 27 | 0 | 140 | 196 | 75 | 131 | 1.68e-16 | 77.4 |
MS.gene051494.t1 | MTR_4g013260 | 41.304 | 92 | 48 | 3 | 105 | 196 | 307 | 392 | 1.69e-16 | 79.7 |
MS.gene051494.t1 | MTR_4g013260 | 49.123 | 57 | 28 | 1 | 140 | 196 | 185 | 240 | 2.84e-13 | 70.1 |
MS.gene051494.t1 | MTR_4g127040 | 50.000 | 58 | 29 | 0 | 140 | 197 | 246 | 303 | 2.90e-16 | 77.8 |
MS.gene051494.t1 | MTR_3g108960 | 52.632 | 57 | 27 | 0 | 140 | 196 | 315 | 371 | 3.15e-16 | 78.6 |
MS.gene051494.t1 | MTR_2g016770 | 49.123 | 57 | 29 | 0 | 140 | 196 | 36 | 92 | 3.38e-16 | 75.9 |
MS.gene051494.t1 | MTR_7g079010 | 54.098 | 61 | 27 | 1 | 140 | 200 | 142 | 201 | 4.19e-16 | 75.9 |
MS.gene051494.t1 | MTR_2g016770 | 49.123 | 57 | 29 | 0 | 140 | 196 | 28 | 84 | 4.38e-16 | 75.5 |
MS.gene051494.t1 | MTR_3g009470 | 34.921 | 126 | 70 | 4 | 124 | 240 | 482 | 604 | 4.62e-16 | 78.6 |
MS.gene051494.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 281 | 335 | 6.37e-12 | 66.2 |
MS.gene051494.t1 | MTR_7g028415 | 52.459 | 61 | 28 | 1 | 140 | 200 | 94 | 153 | 5.41e-16 | 74.3 |
MS.gene051494.t1 | MTR_7g028710 | 52.459 | 61 | 28 | 1 | 140 | 200 | 94 | 153 | 5.41e-16 | 74.3 |
MS.gene051494.t1 | MTR_3g095080 | 52.632 | 57 | 26 | 1 | 140 | 196 | 145 | 200 | 6.69e-16 | 75.1 |
MS.gene051494.t1 | MTR_7g080000 | 42.857 | 84 | 42 | 3 | 113 | 196 | 411 | 488 | 6.83e-16 | 78.2 |
MS.gene051494.t1 | MTR_8g092140 | 52.632 | 57 | 26 | 1 | 140 | 196 | 161 | 216 | 7.10e-16 | 75.5 |
MS.gene051494.t1 | MTR_3g095080 | 52.632 | 57 | 26 | 1 | 140 | 196 | 169 | 224 | 8.28e-16 | 75.5 |
MS.gene051494.t1 | MTR_7g071120 | 45.205 | 73 | 37 | 2 | 124 | 196 | 311 | 380 | 1.01e-15 | 77.4 |
MS.gene051494.t1 | MTR_7g071120 | 49.123 | 57 | 27 | 2 | 140 | 196 | 167 | 221 | 1.75e-11 | 64.7 |
MS.gene051494.t1 | MTR_2g024350 | 33.607 | 122 | 74 | 3 | 140 | 254 | 9 | 130 | 1.18e-15 | 74.7 |
MS.gene051494.t1 | MTR_1g077780 | 41.026 | 78 | 43 | 2 | 119 | 196 | 44 | 118 | 1.25e-15 | 72.8 |
MS.gene051494.t1 | MTR_4g122530 | 45.205 | 73 | 37 | 2 | 124 | 196 | 195 | 264 | 1.74e-15 | 76.3 |
MS.gene051494.t1 | MTR_8g007270 | 52.632 | 57 | 26 | 1 | 140 | 196 | 155 | 210 | 2.49e-15 | 73.9 |
MS.gene051494.t1 | MTR_2g083870 | 52.632 | 57 | 27 | 0 | 140 | 196 | 81 | 137 | 2.51e-15 | 74.3 |
MS.gene051494.t1 | MTR_7g080020 | 42.857 | 84 | 42 | 3 | 113 | 196 | 472 | 549 | 2.80e-15 | 76.3 |
MS.gene051494.t1 | MTR_8g096730 | 45.161 | 62 | 33 | 1 | 140 | 201 | 71 | 131 | 8.42e-15 | 70.5 |
MS.gene051494.t1 | MTR_2g032030 | 42.857 | 77 | 39 | 1 | 125 | 196 | 248 | 324 | 1.25e-14 | 73.9 |
MS.gene051494.t1 | MTR_2g032030 | 42.857 | 77 | 39 | 1 | 125 | 196 | 248 | 324 | 1.43e-14 | 73.9 |
MS.gene051494.t1 | MTR_2g024380 | 32.773 | 119 | 73 | 3 | 140 | 251 | 252 | 370 | 1.86e-14 | 73.6 |
MS.gene051494.t1 | MTR_4g130900 | 49.123 | 57 | 28 | 1 | 140 | 196 | 360 | 415 | 2.10e-14 | 73.2 |
MS.gene051494.t1 | MTR_8g098945 | 49.123 | 57 | 29 | 0 | 140 | 196 | 130 | 186 | 2.66e-14 | 71.6 |
MS.gene051494.t1 | MTR_3g095040 | 49.123 | 57 | 28 | 1 | 140 | 196 | 119 | 174 | 3.32e-14 | 70.1 |
MS.gene051494.t1 | MTR_8g028565 | 45.614 | 57 | 31 | 0 | 140 | 196 | 156 | 212 | 8.01e-14 | 70.9 |
MS.gene051494.t1 | MTR_3g031220 | 52.632 | 57 | 25 | 2 | 140 | 196 | 199 | 253 | 8.97e-14 | 71.2 |
MS.gene051494.t1 | MTR_8g092010 | 31.343 | 134 | 77 | 5 | 66 | 196 | 43 | 164 | 1.05e-13 | 68.6 |
MS.gene051494.t1 | MTR_7g109600 | 47.368 | 57 | 30 | 0 | 140 | 196 | 54 | 110 | 1.35e-13 | 69.7 |
MS.gene051494.t1 | MTR_7g079040 | 47.368 | 57 | 30 | 0 | 140 | 196 | 155 | 211 | 1.70e-13 | 70.1 |
MS.gene051494.t1 | MTR_6g086555 | 39.773 | 88 | 47 | 4 | 111 | 197 | 182 | 264 | 2.02e-13 | 70.1 |
MS.gene051494.t1 | MTR_4g047580 | 35.870 | 92 | 59 | 0 | 124 | 215 | 266 | 357 | 2.13e-13 | 70.5 |
MS.gene051494.t1 | MTR_1g099600 | 36.842 | 76 | 48 | 0 | 140 | 215 | 186 | 261 | 7.65e-13 | 67.8 |
MS.gene051494.t1 | MTR_1g078260 | 41.333 | 75 | 40 | 3 | 124 | 197 | 234 | 305 | 1.05e-12 | 68.2 |
MS.gene051494.t1 | MTR_8g099350 | 50.877 | 57 | 26 | 1 | 140 | 194 | 133 | 189 | 6.81e-12 | 65.5 |
MS.gene051494.t1 | MTR_3g009470 | 50.877 | 57 | 26 | 2 | 140 | 196 | 281 | 335 | 7.19e-12 | 65.9 |
MS.gene051494.t1 | MTR_5g097500 | 46.479 | 71 | 36 | 2 | 126 | 196 | 218 | 286 | 9.82e-12 | 64.7 |
MS.gene051494.t1 | MTR_3g090860 | 50.877 | 57 | 26 | 1 | 140 | 194 | 134 | 190 | 1.16e-11 | 64.7 |
MS.gene051494.t1 | MTR_5g067680 | 49.123 | 57 | 27 | 1 | 140 | 194 | 203 | 259 | 1.24e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051494.t1 | AT1G80840 | 42.140 | 299 | 136 | 8 | 3 | 274 | 6 | 294 | 5.04e-69 | 216 |
MS.gene051494.t1 | AT2G25000 | 41.697 | 271 | 110 | 8 | 19 | 278 | 36 | 269 | 1.37e-59 | 191 |
MS.gene051494.t1 | AT4G31800 | 43.657 | 268 | 129 | 8 | 25 | 278 | 49 | 308 | 1.41e-59 | 192 |
MS.gene051494.t1 | AT2G25000 | 41.825 | 263 | 108 | 7 | 24 | 278 | 1 | 226 | 2.29e-59 | 189 |
MS.gene051494.t1 | AT2G25000 | 41.825 | 263 | 108 | 7 | 24 | 278 | 1 | 226 | 2.29e-59 | 189 |
MS.gene051494.t1 | AT2G25000 | 41.729 | 266 | 110 | 7 | 21 | 278 | 20 | 248 | 5.25e-59 | 189 |
MS.gene051494.t1 | AT4G31800 | 54.706 | 170 | 67 | 4 | 111 | 278 | 82 | 243 | 4.07e-53 | 173 |
MS.gene051494.t1 | AT4G31800 | 41.765 | 170 | 76 | 4 | 25 | 176 | 49 | 213 | 2.14e-32 | 119 |
MS.gene051494.t1 | AT4G01720 | 33.503 | 197 | 98 | 4 | 28 | 196 | 105 | 296 | 1.78e-24 | 102 |
MS.gene051494.t1 | AT4G04450 | 48.913 | 92 | 47 | 0 | 124 | 215 | 183 | 274 | 2.03e-24 | 102 |
MS.gene051494.t1 | AT4G04450 | 48.913 | 92 | 47 | 0 | 124 | 215 | 277 | 368 | 4.90e-24 | 101 |
MS.gene051494.t1 | AT1G68150 | 49.485 | 97 | 48 | 1 | 115 | 210 | 210 | 306 | 6.81e-24 | 100 |
MS.gene051494.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 5.25e-23 | 98.6 |
MS.gene051494.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 5.25e-23 | 98.6 |
MS.gene051494.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 5.25e-23 | 98.6 |
MS.gene051494.t1 | AT4G22070 | 54.795 | 73 | 33 | 0 | 124 | 196 | 282 | 354 | 5.25e-23 | 98.6 |
MS.gene051494.t1 | AT1G62300 | 54.795 | 73 | 33 | 0 | 124 | 196 | 297 | 369 | 7.99e-23 | 98.2 |
MS.gene051494.t1 | AT5G15130 | 52.703 | 74 | 35 | 0 | 140 | 213 | 186 | 259 | 4.65e-22 | 95.9 |
MS.gene051494.t1 | AT5G15130 | 52.703 | 74 | 35 | 0 | 140 | 213 | 228 | 301 | 6.19e-22 | 95.5 |
MS.gene051494.t1 | AT1G18860 | 64.912 | 57 | 20 | 0 | 140 | 196 | 240 | 296 | 1.98e-21 | 94.0 |
MS.gene051494.t1 | AT1G29860 | 53.333 | 60 | 27 | 1 | 137 | 196 | 134 | 192 | 4.47e-19 | 85.1 |
MS.gene051494.t1 | AT4G18170 | 53.333 | 60 | 27 | 1 | 137 | 196 | 170 | 228 | 4.55e-19 | 85.9 |
MS.gene051494.t1 | AT1G64000 | 57.377 | 61 | 25 | 1 | 140 | 200 | 115 | 174 | 4.99e-19 | 83.2 |
MS.gene051494.t1 | AT2G47260 | 55.000 | 60 | 26 | 1 | 137 | 196 | 172 | 230 | 1.26e-18 | 84.7 |
MS.gene051494.t1 | AT2G04880 | 57.627 | 59 | 24 | 1 | 138 | 196 | 282 | 339 | 1.28e-18 | 85.9 |
MS.gene051494.t1 | AT5G26170 | 50.877 | 57 | 27 | 1 | 140 | 196 | 114 | 169 | 1.31e-18 | 81.6 |
MS.gene051494.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 1.37e-18 | 82.4 |
MS.gene051494.t1 | AT5G07100 | 46.479 | 71 | 37 | 1 | 126 | 196 | 11 | 80 | 6.85e-14 | 69.7 |
MS.gene051494.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 1.37e-18 | 82.4 |
MS.gene051494.t1 | AT5G07100 | 46.479 | 71 | 37 | 1 | 126 | 196 | 11 | 80 | 6.85e-14 | 69.7 |
MS.gene051494.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 1.37e-18 | 82.4 |
MS.gene051494.t1 | AT5G07100 | 46.479 | 71 | 37 | 1 | 126 | 196 | 11 | 80 | 6.85e-14 | 69.7 |
MS.gene051494.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 101 | 197 | 1.37e-18 | 82.4 |
MS.gene051494.t1 | AT5G07100 | 46.479 | 71 | 37 | 1 | 126 | 196 | 11 | 80 | 6.85e-14 | 69.7 |
MS.gene051494.t1 | AT2G04880 | 57.627 | 59 | 24 | 1 | 138 | 196 | 306 | 363 | 1.43e-18 | 85.5 |
MS.gene051494.t1 | AT5G41570 | 57.377 | 61 | 25 | 1 | 140 | 200 | 99 | 158 | 2.26e-18 | 81.3 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 206 | 261 | 2.68e-18 | 84.3 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 206 | 261 | 2.68e-18 | 84.3 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 206 | 261 | 2.68e-18 | 84.3 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 206 | 261 | 2.68e-18 | 84.3 |
MS.gene051494.t1 | AT1G13960 | 45.122 | 82 | 39 | 3 | 115 | 196 | 237 | 312 | 3.25e-18 | 84.0 |
MS.gene051494.t1 | AT1G13960 | 52.632 | 57 | 25 | 2 | 140 | 196 | 77 | 131 | 4.54e-13 | 68.9 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 310 | 365 | 4.27e-18 | 84.3 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 342 | 397 | 4.30e-18 | 84.3 |
MS.gene051494.t1 | AT4G26640 | 56.140 | 57 | 24 | 1 | 140 | 196 | 382 | 437 | 4.47e-18 | 84.3 |
MS.gene051494.t1 | AT5G46350 | 47.222 | 72 | 33 | 2 | 125 | 196 | 173 | 239 | 5.76e-18 | 82.8 |
MS.gene051494.t1 | AT4G31550 | 52.632 | 57 | 27 | 0 | 140 | 196 | 247 | 303 | 5.81e-18 | 82.8 |
MS.gene051494.t1 | AT4G31550 | 52.632 | 57 | 27 | 0 | 140 | 196 | 246 | 302 | 5.98e-18 | 82.8 |
MS.gene051494.t1 | AT5G49520 | 47.222 | 72 | 34 | 2 | 140 | 208 | 222 | 292 | 6.06e-18 | 83.6 |
MS.gene051494.t1 | AT2G03340 | 45.122 | 82 | 39 | 3 | 115 | 196 | 396 | 471 | 6.59e-18 | 84.0 |
MS.gene051494.t1 | AT2G03340 | 52.632 | 57 | 25 | 2 | 140 | 196 | 251 | 305 | 9.66e-14 | 71.6 |
MS.gene051494.t1 | AT1G13960 | 45.122 | 82 | 39 | 3 | 115 | 196 | 390 | 465 | 7.05e-18 | 83.6 |
MS.gene051494.t1 | AT1G13960 | 52.632 | 57 | 25 | 2 | 140 | 196 | 230 | 284 | 5.88e-13 | 68.9 |
MS.gene051494.t1 | AT5G07100 | 38.614 | 101 | 58 | 3 | 96 | 196 | 194 | 290 | 7.11e-18 | 82.4 |
MS.gene051494.t1 | AT5G07100 | 46.479 | 71 | 37 | 1 | 126 | 196 | 104 | 173 | 2.27e-13 | 69.3 |
MS.gene051494.t1 | AT2G30590 | 54.386 | 57 | 26 | 0 | 140 | 196 | 314 | 370 | 7.35e-18 | 83.2 |
MS.gene051494.t1 | AT1G69810 | 50.000 | 74 | 36 | 1 | 124 | 196 | 130 | 203 | 2.66e-17 | 80.9 |
MS.gene051494.t1 | AT3G62340 | 51.562 | 64 | 30 | 1 | 133 | 196 | 112 | 174 | 3.12e-17 | 80.1 |
MS.gene051494.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 3.28e-17 | 80.1 |
MS.gene051494.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 3.28e-17 | 80.1 |
MS.gene051494.t1 | AT1G69310 | 54.386 | 57 | 25 | 1 | 140 | 196 | 148 | 203 | 3.28e-17 | 80.1 |
MS.gene051494.t1 | AT1G69810 | 50.000 | 74 | 36 | 1 | 124 | 196 | 188 | 261 | 3.42e-17 | 81.3 |
MS.gene051494.t1 | AT2G23320 | 49.123 | 57 | 29 | 0 | 140 | 196 | 241 | 297 | 4.09e-17 | 80.1 |
MS.gene051494.t1 | AT2G24570 | 52.632 | 57 | 27 | 0 | 140 | 196 | 244 | 300 | 4.79e-17 | 80.1 |
MS.gene051494.t1 | AT5G56270 | 47.945 | 73 | 35 | 2 | 124 | 196 | 474 | 543 | 4.91e-17 | 81.3 |
MS.gene051494.t1 | AT5G56270 | 27.461 | 193 | 121 | 6 | 9 | 196 | 150 | 328 | 6.09e-12 | 66.2 |
MS.gene051494.t1 | AT5G13080 | 53.226 | 62 | 28 | 1 | 140 | 201 | 68 | 128 | 6.33e-17 | 76.3 |
MS.gene051494.t1 | AT3G01080 | 43.902 | 82 | 40 | 3 | 115 | 196 | 287 | 362 | 7.75e-17 | 80.5 |
MS.gene051494.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 168 | 222 | 8.18e-11 | 62.4 |
MS.gene051494.t1 | AT5G28650 | 45.833 | 72 | 37 | 1 | 127 | 196 | 248 | 319 | 8.32e-17 | 79.7 |
MS.gene051494.t1 | AT1G29280 | 50.877 | 57 | 28 | 0 | 140 | 196 | 75 | 131 | 8.86e-17 | 78.6 |
MS.gene051494.t1 | AT3G01080 | 46.575 | 73 | 36 | 2 | 124 | 196 | 331 | 400 | 9.24e-17 | 80.1 |
MS.gene051494.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 206 | 260 | 7.78e-11 | 62.8 |
MS.gene051494.t1 | AT4G24240 | 48.276 | 58 | 30 | 0 | 140 | 197 | 282 | 339 | 1.39e-16 | 79.3 |
MS.gene051494.t1 | AT3G04670 | 44.444 | 72 | 38 | 1 | 127 | 196 | 248 | 319 | 2.12e-16 | 78.6 |
MS.gene051494.t1 | AT2G38470 | 52.632 | 57 | 26 | 1 | 140 | 196 | 363 | 418 | 3.05e-16 | 79.0 |
MS.gene051494.t1 | AT2G38470 | 52.632 | 57 | 25 | 2 | 140 | 196 | 185 | 239 | 1.09e-13 | 71.2 |
MS.gene051494.t1 | AT2G44745 | 52.632 | 57 | 26 | 1 | 140 | 196 | 146 | 201 | 1.29e-15 | 74.3 |
MS.gene051494.t1 | AT3G01970 | 49.180 | 61 | 30 | 1 | 140 | 200 | 66 | 125 | 1.44e-15 | 72.8 |
MS.gene051494.t1 | AT4G30935 | 45.455 | 66 | 35 | 1 | 131 | 196 | 323 | 387 | 1.61e-15 | 76.6 |
MS.gene051494.t1 | AT2G30250 | 45.205 | 73 | 37 | 2 | 124 | 196 | 315 | 384 | 2.43e-15 | 75.9 |
MS.gene051494.t1 | AT2G30250 | 46.479 | 71 | 34 | 3 | 140 | 210 | 167 | 233 | 2.33e-11 | 63.9 |
MS.gene051494.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 259 | 325 | 4.76e-15 | 74.7 |
MS.gene051494.t1 | AT2G37260 | 45.070 | 71 | 37 | 2 | 126 | 196 | 72 | 140 | 1.27e-14 | 73.6 |
MS.gene051494.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 339 | 405 | 5.22e-15 | 75.1 |
MS.gene051494.t1 | AT2G37260 | 45.070 | 71 | 37 | 2 | 126 | 196 | 152 | 220 | 1.31e-14 | 73.9 |
MS.gene051494.t1 | AT2G37260 | 45.588 | 68 | 36 | 1 | 129 | 196 | 257 | 323 | 5.27e-15 | 74.7 |
MS.gene051494.t1 | AT2G37260 | 45.070 | 71 | 37 | 2 | 126 | 196 | 70 | 138 | 1.34e-14 | 73.6 |
MS.gene051494.t1 | AT1G55600 | 50.000 | 62 | 30 | 1 | 140 | 201 | 308 | 368 | 5.35e-15 | 75.1 |
MS.gene051494.t1 | AT2G34830 | 47.692 | 65 | 34 | 0 | 132 | 196 | 208 | 272 | 7.01e-15 | 74.7 |
MS.gene051494.t1 | AT2G34830 | 47.692 | 65 | 34 | 0 | 132 | 196 | 217 | 281 | 7.25e-15 | 74.7 |
MS.gene051494.t1 | AT4G39410 | 50.877 | 57 | 27 | 1 | 140 | 196 | 224 | 279 | 9.42e-15 | 73.6 |
MS.gene051494.t1 | AT2G21900 | 44.444 | 72 | 38 | 2 | 126 | 196 | 95 | 165 | 1.03e-14 | 71.6 |
MS.gene051494.t1 | AT1G30650 | 47.692 | 65 | 34 | 0 | 132 | 196 | 210 | 274 | 1.55e-14 | 73.6 |
MS.gene051494.t1 | AT3G58710 | 49.123 | 57 | 29 | 0 | 140 | 196 | 72 | 128 | 2.29e-14 | 72.0 |
MS.gene051494.t1 | AT3G58710 | 49.123 | 57 | 29 | 0 | 140 | 196 | 71 | 127 | 2.62e-14 | 71.6 |
MS.gene051494.t1 | AT5G64810 | 45.614 | 57 | 30 | 1 | 140 | 196 | 111 | 166 | 8.26e-14 | 68.9 |
MS.gene051494.t1 | AT4G01250 | 45.614 | 57 | 31 | 0 | 140 | 196 | 129 | 185 | 8.81e-14 | 70.5 |
MS.gene051494.t1 | AT2G46130 | 50.877 | 57 | 27 | 1 | 140 | 196 | 31 | 86 | 1.09e-13 | 66.6 |
MS.gene051494.t1 | AT5G43290 | 40.789 | 76 | 43 | 2 | 121 | 196 | 97 | 170 | 1.84e-13 | 69.3 |
MS.gene051494.t1 | AT5G52830 | 49.123 | 57 | 29 | 0 | 140 | 196 | 166 | 222 | 2.12e-13 | 69.7 |
MS.gene051494.t1 | AT4G26440 | 43.836 | 73 | 38 | 2 | 124 | 196 | 359 | 428 | 2.63e-13 | 70.1 |
MS.gene051494.t1 | AT4G26440 | 47.368 | 57 | 28 | 2 | 140 | 196 | 179 | 233 | 7.31e-11 | 62.8 |
MS.gene051494.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 1110 | 1209 | 4.44e-13 | 69.7 |
MS.gene051494.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 1138 | 1237 | 4.67e-13 | 69.7 |
MS.gene051494.t1 | AT5G45050 | 34.951 | 103 | 64 | 1 | 94 | 196 | 999 | 1098 | 5.03e-13 | 69.7 |
MS.gene051494.t1 | AT1G69310 | 50.877 | 57 | 23 | 2 | 140 | 196 | 148 | 199 | 8.89e-13 | 67.4 |
MS.gene051494.t1 | AT4G23550 | 30.435 | 138 | 87 | 3 | 140 | 275 | 141 | 271 | 1.39e-12 | 67.4 |
MS.gene051494.t1 | AT2G46400 | 43.836 | 73 | 37 | 2 | 124 | 194 | 91 | 161 | 4.04e-12 | 65.9 |
MS.gene051494.t1 | AT3G01080 | 49.123 | 57 | 27 | 2 | 140 | 196 | 206 | 260 | 7.47e-11 | 62.4 |
MS.gene051494.t1 | AT5G24110 | 27.778 | 162 | 99 | 5 | 50 | 194 | 10 | 170 | 9.57e-11 | 61.6 |
Find 45 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTATTTCTGGAAGAATTT+TGG | 0.107436 | 1.3:+7955473 | MS.gene051494:CDS |
GCACTTGCCACTGCTATTTC+TGG | 0.167473 | 1.3:+7955462 | MS.gene051494:CDS |
AATTGCTGGATAGATGATTT+TGG | 0.173303 | 1.3:-7955387 | None:intergenic |
TGGAACATTATCAAGCTTAA+TGG | 0.220468 | 1.3:-7955367 | None:intergenic |
TTCCTCACCTAAGGCTTATA+AGG | 0.237117 | 1.3:+7954274 | MS.gene051494:CDS |
TCTTTCTTGATTGTTGTGTT+TGG | 0.315541 | 1.3:-7954124 | None:intergenic |
GCAAGTGCTGTAGTGAAATT+AGG | 0.319456 | 1.3:-7955447 | None:intergenic |
CAAAGTGAAGAAGCTCCTTT+AGG | 0.328438 | 1.3:+7955294 | MS.gene051494:CDS |
GGATATCAATGGAGGAAATA+TGG | 0.328462 | 1.3:+7954509 | MS.gene051494:CDS |
AATATGTTTGATACTGTTAG+AGG | 0.330331 | 1.3:+7954173 | MS.gene051494:CDS |
ATTTGTTCTTATTAGAAGTA+TGG | 0.343403 | 1.3:-7955497 | None:intergenic |
TTATGTGCAGGACGAAGTTT+TGG | 0.348061 | 1.3:+7953977 | MS.gene051494:intron |
CCTCTCCTAGAGCTTACTTT+AGG | 0.371319 | 1.3:+7954555 | MS.gene051494:CDS |
TATGTTGCAACTAGTATAGT+AGG | 0.404321 | 1.3:-7955216 | None:intergenic |
ATGAAGAATCATTAATCAAA+AGG | 0.454669 | 1.3:+7954237 | MS.gene051494:CDS |
CTAAAGGAGCTTCTTCACTT+TGG | 0.478227 | 1.3:-7955293 | None:intergenic |
ATACTTCTAATAAGAACAAA+TGG | 0.482703 | 1.3:+7955499 | MS.gene051494:CDS |
ATGGAGGAAATATGGTCAAA+AGG | 0.485930 | 1.3:+7954517 | MS.gene051494:CDS |
ACAAGAACCTTATAAGCCTT+AGG | 0.486641 | 1.3:-7954281 | None:intergenic |
ACATTATCAAGCTTAATGGT+TGG | 0.490629 | 1.3:-7955363 | None:intergenic |
CATTAATCAAAAGGCCATGT+AGG | 0.493040 | 1.3:+7954246 | MS.gene051494:CDS |
ATACTAGTTGCAACATATGA+AGG | 0.494693 | 1.3:+7955222 | MS.gene051494:CDS |
TAGGGATATTTCCTCACCTA+AGG | 0.500791 | 1.3:+7954265 | MS.gene051494:CDS |
AACTGGGCAGCTTGGAGCAT+AGG | 0.506437 | 1.3:-7954582 | None:intergenic |
TAGTGCTTCTTCTATACTCA+AGG | 0.512134 | 1.3:+7953508 | MS.gene051494:CDS |
GAGCACCTAAAGTAAGCTCT+AGG | 0.538868 | 1.3:-7954560 | None:intergenic |
ATTAATCAAAAGGCCATGTA+GGG | 0.538909 | 1.3:+7954247 | MS.gene051494:CDS |
CCTAAAGTAAGCTCTAGGAG+AGG | 0.548395 | 1.3:-7954555 | None:intergenic |
CTCATAGTTCTCACACATGT+TGG | 0.554828 | 1.3:-7954054 | None:intergenic |
GTAACATGAACTGAACCTAA+AGG | 0.560432 | 1.3:-7955309 | None:intergenic |
CTAAAGTAAGCTCTAGGAGA+GGG | 0.569732 | 1.3:-7954554 | None:intergenic |
GTCTCAGTTCTGAGAACAAG+AGG | 0.575865 | 1.3:+7954015 | MS.gene051494:CDS |
TTTCAGCTTTCTCATGACCA+TGG | 0.582497 | 1.3:-7955254 | None:intergenic |
AACAATGGAATCAACATGCG+TGG | 0.589289 | 1.3:+7953463 | None:intergenic |
GGTATAAAGTATGTGATGGA+TGG | 0.592987 | 1.3:+7954488 | MS.gene051494:intron |
ATGTGATGGATGGATATCAA+TGG | 0.593080 | 1.3:+7954498 | MS.gene051494:CDS |
TTGTGGTATAAAGTATGTGA+TGG | 0.595565 | 1.3:+7954484 | MS.gene051494:intron |
ATGTTGCAACTAGTATAGTA+GGG | 0.601976 | 1.3:-7955215 | None:intergenic |
GGTGAGGAAATATCCCTACA+TGG | 0.620508 | 1.3:-7954260 | None:intergenic |
GTTCTTTGAATAATTTGTTG+AGG | 0.631715 | 1.3:-7955336 | None:intergenic |
AACCTTATAAGCCTTAGGTG+AGG | 0.658225 | 1.3:-7954276 | None:intergenic |
TAAAGTAAGCTCTAGGAGAG+GGG | 0.664718 | 1.3:-7954553 | None:intergenic |
TGATGGATGGATATCAATGG+AGG | 0.669535 | 1.3:+7954501 | MS.gene051494:CDS |
AATTCTTCCAGAAATAGCAG+TGG | 0.680346 | 1.3:-7955469 | None:intergenic |
TATGAAGGAGAGCACAACCA+TGG | 0.694590 | 1.3:+7955237 | MS.gene051494:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAATATACAATACTTA+GGG | - | chr1.3:7953788-7953807 | None:intergenic | 10.0% |
!! | TATATTAATTTCACTAAAAA+TGG | + | chr1.3:7953797-7953816 | MS.gene051494:intron | 10.0% |
!!! | ATATTACAATAATTTTTAGT+AGG | + | chr1.3:7954735-7954754 | MS.gene051494:intron | 10.0% |
!!! | TTGATTTGAAAAAAATAATT+CGG | + | chr1.3:7954892-7954911 | MS.gene051494:intron | 10.0% |
!! | GAAATTAATATACAATACTT+AGG | - | chr1.3:7953789-7953808 | None:intergenic | 15.0% |
!! | TAATTCAATAATGTTGAAAT+TGG | + | chr1.3:7953820-7953839 | MS.gene051494:intron | 15.0% |
!! | TACAAATTCAAAATTAATCA+AGG | - | chr1.3:7954463-7954482 | None:intergenic | 15.0% |
!!! | ATCAAAATTTGATTTTGTTT+GGG | - | chr1.3:7955153-7955172 | None:intergenic | 15.0% |
!!! | TAATTTTGAATTTGTATTTG+TGG | + | chr1.3:7954467-7954486 | MS.gene051494:intron | 15.0% |
!! | AATACTTAGGGATATAATAA+AGG | - | chr1.3:7953776-7953795 | None:intergenic | 20.0% |
!! | AGAAACAAAAGTAAAAAGAT+AGG | + | chr1.3:7955023-7955042 | MS.gene051494:intron | 20.0% |
!! | ATACTTAGGGATATAATAAA+GGG | - | chr1.3:7953775-7953794 | None:intergenic | 20.0% |
!! | ATACTTCTAATAAGAACAAA+TGG | + | chr1.3:7955499-7955518 | MS.gene051494:CDS | 20.0% |
!! | ATGAAGAATCATTAATCAAA+AGG | + | chr1.3:7954237-7954256 | MS.gene051494:CDS | 20.0% |
!! | ATTTGTTCTTATTAGAAGTA+TGG | - | chr1.3:7955500-7955519 | None:intergenic | 20.0% |
!! | CTCTTATGTCATTATTAATT+AGG | + | chr1.3:7955173-7955192 | MS.gene051494:intron | 20.0% |
!!! | AATGTCATTCTAAGAAATTT+AGG | - | chr1.3:7953950-7953969 | None:intergenic | 20.0% |
!!! | AGATGATTTTAAAACTTAGA+AGG | - | chr1.3:7954923-7954942 | None:intergenic | 20.0% |
!!! | ATGTCATTCTAAGAAATTTA+GGG | - | chr1.3:7953949-7953968 | None:intergenic | 20.0% |
!!! | ATTATTACCTTCTTTTTAAC+TGG | - | chr1.3:7954602-7954621 | None:intergenic | 20.0% |
!!! | GATCAAAATTTGATTTTGTT+TGG | - | chr1.3:7955154-7955173 | None:intergenic | 20.0% |
!!! | TTATTACCTTCTTTTTAACT+GGG | - | chr1.3:7954601-7954620 | None:intergenic | 20.0% |
! | AATATGTTTGATACTGTTAG+AGG | + | chr1.3:7954173-7954192 | MS.gene051494:CDS | 25.0% |
! | AGTCTTTATATGAAAAGATG+TGG | - | chr1.3:7954774-7954793 | None:intergenic | 25.0% |
! | CAGTTAATGAAGTAAAATTG+TGG | + | chr1.3:7954417-7954436 | MS.gene051494:intron | 25.0% |
! | CATGTTTACCAACAATATAT+TGG | - | chr1.3:7954844-7954863 | None:intergenic | 25.0% |
! | TAATACACAATGTCGTATTT+AGG | - | chr1.3:7953692-7953711 | None:intergenic | 25.0% |
! | TACTTAGACCAATATATTGT+TGG | + | chr1.3:7954833-7954852 | MS.gene051494:intron | 25.0% |
! | TCTTGAATCAAAATCATGAA+TGG | - | chr1.3:7955126-7955145 | None:intergenic | 25.0% |
! | TTTCGATAGAGATTACTAAT+CGG | - | chr1.3:7954714-7954733 | None:intergenic | 25.0% |
!! | ACATTGAAAATTTTATGTGC+AGG | + | chr1.3:7953965-7953984 | MS.gene051494:intron | 25.0% |
!!! | GTTCTTTGAATAATTTGTTG+AGG | - | chr1.3:7955339-7955358 | None:intergenic | 25.0% |
AAGCGTTTCTAACAATTTGA+TGG | + | chr1.3:7953625-7953644 | MS.gene051494:intron | 30.0% | |
ACATTATCAAGCTTAATGGT+TGG | - | chr1.3:7955366-7955385 | None:intergenic | 30.0% | |
ATACTAGTTGCAACATATGA+AGG | + | chr1.3:7955222-7955241 | MS.gene051494:CDS | 30.0% | |
ATGTTGCAACTAGTATAGTA+GGG | - | chr1.3:7955218-7955237 | None:intergenic | 30.0% | |
ATTAATCAAAAGGCCATGTA+GGG | + | chr1.3:7954247-7954266 | MS.gene051494:CDS | 30.0% | |
TATGAAAAGATGTGGTTGAT+AGG | - | chr1.3:7954766-7954785 | None:intergenic | 30.0% | |
TATGTTGCAACTAGTATAGT+AGG | - | chr1.3:7955219-7955238 | None:intergenic | 30.0% | |
TCTTTCTTGATTGTTGTGTT+TGG | - | chr1.3:7954127-7954146 | None:intergenic | 30.0% | |
TGGAACATTATCAAGCTTAA+TGG | - | chr1.3:7955370-7955389 | None:intergenic | 30.0% | |
TTGTGGTATAAAGTATGTGA+TGG | + | chr1.3:7954484-7954503 | MS.gene051494:intron | 30.0% | |
TTTGTTGAACCAAAAATTGC+TGG | - | chr1.3:7955404-7955423 | None:intergenic | 30.0% | |
! | AATTGCTGGATAGATGATTT+TGG | - | chr1.3:7955390-7955409 | None:intergenic | 30.0% |
! | ATCATCTATCCAGCAATTTT+TGG | + | chr1.3:7955392-7955411 | MS.gene051494:CDS | 30.0% |
!!! | GCAATTTTTGGTTCAACAAA+TGG | + | chr1.3:7955404-7955423 | MS.gene051494:CDS | 30.0% |
!!! | TGCTATTTCTGGAAGAATTT+TGG | + | chr1.3:7955473-7955492 | MS.gene051494:CDS | 30.0% |
AATTCTTCCAGAAATAGCAG+TGG | - | chr1.3:7955472-7955491 | None:intergenic | 35.0% | |
ACAAGAACCTTATAAGCCTT+AGG | - | chr1.3:7954284-7954303 | None:intergenic | 35.0% | |
AGATTACTAATCGGTGAAGT+AGG | - | chr1.3:7954705-7954724 | None:intergenic | 35.0% | |
ATGGAGGAAATATGGTCAAA+AGG | + | chr1.3:7954517-7954536 | MS.gene051494:CDS | 35.0% | |
CATTAATCAAAAGGCCATGT+AGG | + | chr1.3:7954246-7954265 | MS.gene051494:CDS | 35.0% | |
GGATATCAATGGAGGAAATA+TGG | + | chr1.3:7954509-7954528 | MS.gene051494:CDS | 35.0% | |
GTAACATGAACTGAACCTAA+AGG | - | chr1.3:7955312-7955331 | None:intergenic | 35.0% | |
TAGTGCTTCTTCTATACTCA+AGG | + | chr1.3:7953508-7953527 | MS.gene051494:CDS | 35.0% | |
! | GGTATAAAGTATGTGATGGA+TGG | + | chr1.3:7954488-7954507 | MS.gene051494:intron | 35.0% |
! | TTGATGGTAATAACCCACTT+AGG | + | chr1.3:7953641-7953660 | MS.gene051494:intron | 35.0% |
!! | ATGTGATGGATGGATATCAA+TGG | + | chr1.3:7954498-7954517 | MS.gene051494:CDS | 35.0% |
AACCTTATAAGCCTTAGGTG+AGG | - | chr1.3:7954279-7954298 | None:intergenic | 40.0% | |
AAGCTGCCCAGTTAAAAAGA+AGG | + | chr1.3:7954592-7954611 | MS.gene051494:CDS | 40.0% | |
CAAAGTGAAGAAGCTCCTTT+AGG | + | chr1.3:7955294-7955313 | MS.gene051494:CDS | 40.0% | |
CTAAAGGAGCTTCTTCACTT+TGG | - | chr1.3:7955296-7955315 | None:intergenic | 40.0% | |
CTCATAGTTCTCACACATGT+TGG | - | chr1.3:7954057-7954076 | None:intergenic | 40.0% | |
TAGGGATATTTCCTCACCTA+AGG | + | chr1.3:7954265-7954284 | MS.gene051494:CDS | 40.0% | |
TGGTAATAACCCACTTAGGT+TGG | + | chr1.3:7953645-7953664 | MS.gene051494:intron | 40.0% | |
TTACTAATCGGTGAAGTAGG+TGG | - | chr1.3:7954702-7954721 | None:intergenic | 40.0% | |
TTCCTCACCTAAGGCTTATA+AGG | + | chr1.3:7954274-7954293 | MS.gene051494:CDS | 40.0% | |
TTGGCCTAATGGTATTAGCT+TGG | + | chr1.3:7953664-7953683 | MS.gene051494:intron | 40.0% | |
TTTCAGCTTTCTCATGACCA+TGG | - | chr1.3:7955257-7955276 | None:intergenic | 40.0% | |
! | GCAAGTGCTGTAGTGAAATT+AGG | - | chr1.3:7955450-7955469 | None:intergenic | 40.0% |
! | TGATGGATGGATATCAATGG+AGG | + | chr1.3:7954501-7954520 | MS.gene051494:CDS | 40.0% |
! | TGGCCTAATGGTATTAGCTT+GGG | + | chr1.3:7953665-7953684 | MS.gene051494:intron | 40.0% |
! | TTATGTGCAGGACGAAGTTT+TGG | + | chr1.3:7953977-7953996 | MS.gene051494:intron | 40.0% |
!! | CTAAAGTAAGCTCTAGGAGA+GGG | - | chr1.3:7954557-7954576 | None:intergenic | 40.0% |
!! | TAAAGTAAGCTCTAGGAGAG+GGG | - | chr1.3:7954556-7954575 | None:intergenic | 40.0% |
!! | TTCTTTTTAACTGGGCAGCT+TGG | - | chr1.3:7954593-7954612 | None:intergenic | 40.0% |
ACCATTAGGCCAACCTAAGT+GGG | - | chr1.3:7953657-7953676 | None:intergenic | 45.0% | |
CCTCTCCTAGAGCTTACTTT+AGG | + | chr1.3:7954555-7954574 | MS.gene051494:CDS | 45.0% | |
GAGCACCTAAAGTAAGCTCT+AGG | - | chr1.3:7954563-7954582 | None:intergenic | 45.0% | |
GGTCCCAAGCTAATACCATT+AGG | - | chr1.3:7953671-7953690 | None:intergenic | 45.0% | |
GGTGAGGAAATATCCCTACA+TGG | - | chr1.3:7954263-7954282 | None:intergenic | 45.0% | |
TACCATTAGGCCAACCTAAG+TGG | - | chr1.3:7953658-7953677 | None:intergenic | 45.0% | |
! | TATGAAGGAGAGCACAACCA+TGG | + | chr1.3:7955237-7955256 | MS.gene051494:CDS | 45.0% |
!! | CCTAAAGTAAGCTCTAGGAG+AGG | - | chr1.3:7954558-7954577 | None:intergenic | 45.0% |
!! | GTCTCAGTTCTGAGAACAAG+AGG | + | chr1.3:7954015-7954034 | MS.gene051494:CDS | 45.0% |
!! | ACCCACTTAGGTTGGCCTAA+TGG | + | chr1.3:7953653-7953672 | MS.gene051494:intron | 50.0% |
!! | GCACTTGCCACTGCTATTTC+TGG | + | chr1.3:7955462-7955481 | MS.gene051494:CDS | 50.0% |
AACTGGGCAGCTTGGAGCAT+AGG | - | chr1.3:7954585-7954604 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 7953467 | 7955524 | 7953467 | ID=MS.gene051494 |
chr1.3 | mRNA | 7953467 | 7955524 | 7953467 | ID=MS.gene051494.t1;Parent=MS.gene051494 |
chr1.3 | exon | 7953467 | 7953529 | 7953467 | ID=MS.gene051494.t1.exon1;Parent=MS.gene051494.t1 |
chr1.3 | CDS | 7953467 | 7953529 | 7953467 | ID=cds.MS.gene051494.t1;Parent=MS.gene051494.t1 |
chr1.3 | exon | 7953987 | 7954331 | 7953987 | ID=MS.gene051494.t1.exon2;Parent=MS.gene051494.t1 |
chr1.3 | CDS | 7953987 | 7954331 | 7953987 | ID=cds.MS.gene051494.t1;Parent=MS.gene051494.t1 |
chr1.3 | exon | 7954497 | 7954613 | 7954497 | ID=MS.gene051494.t1.exon3;Parent=MS.gene051494.t1 |
chr1.3 | CDS | 7954497 | 7954613 | 7954497 | ID=cds.MS.gene051494.t1;Parent=MS.gene051494.t1 |
chr1.3 | exon | 7955195 | 7955524 | 7955195 | ID=MS.gene051494.t1.exon4;Parent=MS.gene051494.t1 |
chr1.3 | CDS | 7955195 | 7955524 | 7955195 | ID=cds.MS.gene051494.t1;Parent=MS.gene051494.t1 |
Gene Sequence |
Protein sequence |