AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058555

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058555.t1 MTR_8g106150 98.604 1003 14 0 1 1003 1 1003 0.0 2061
MS.gene058555.t1 MTR_8g106150 98.404 752 12 0 252 1003 9 760 0.0 1542
MS.gene058555.t1 MTR_5g097410 53.367 980 401 13 41 994 263 1212 0.0 992
MS.gene058555.t1 MTR_8g080770 52.261 995 398 17 29 994 21 967 0.0 988
MS.gene058555.t1 MTR_3g085130 52.008 996 412 16 25 996 80 1033 0.0 976
MS.gene058555.t1 MTR_8g080770 52.987 904 353 15 116 994 2 858 0.0 903
MS.gene058555.t1 MTR_3g085130 52.195 843 358 14 162 996 18 823 0.0 834
MS.gene058555.t1 MTR_2g067240 78.065 310 8 2 190 499 1 250 2.91e-161 474
MS.gene058555.t1 MTR_5g044100 55.689 167 47 2 765 931 83 222 7.78e-47 167
MS.gene058555.t1 MTR_3g105590 36.364 297 170 8 386 680 373 652 7.59e-41 163
MS.gene058555.t1 MTR_3g105590 30.435 161 99 3 847 995 790 949 2.13e-16 85.1
MS.gene058555.t1 MTR_1g013360 34.494 316 179 8 386 680 379 687 9.10e-41 163
MS.gene058555.t1 MTR_1g013360 32.867 143 84 3 863 994 870 1011 1.77e-14 78.6
MS.gene058555.t1 MTR_5g022470 32.738 336 192 7 336 670 462 764 3.95e-40 161
MS.gene058555.t1 MTR_5g022470 31.138 167 74 4 858 998 1047 1198 7.75e-15 80.1
MS.gene058555.t1 MTR_5g022470 32.738 336 192 7 336 670 462 764 4.38e-40 161
MS.gene058555.t1 MTR_8g075340 34.416 308 152 5 372 670 460 726 6.84e-40 160
MS.gene058555.t1 MTR_8g075340 33.333 162 71 4 844 982 1007 1154 1.23e-16 85.9
MS.gene058555.t1 MTR_4g031150 29.888 358 187 9 377 727 387 687 5.72e-30 128
MS.gene058555.t1 MTR_4g031150 30.201 149 84 4 849 997 656 784 7.43e-11 66.6
MS.gene058555.t1 MTR_7g109150 31.148 305 155 4 377 680 338 588 8.76e-28 120
MS.gene058555.t1 MTR_1g087140 26.344 372 222 9 340 695 346 681 1.57e-25 114
MS.gene058555.t1 MTR_1g087140 32.468 154 79 5 846 991 958 1094 6.83e-14 77.0
MS.gene058555.t1 MTR_1g090850 27.446 368 220 13 335 688 328 662 4.58e-24 109
MS.gene058555.t1 MTR_1g090850 39.007 141 60 5 858 990 923 1045 5.66e-17 87.0
MS.gene058555.t1 MTR_1g079790 25.481 208 152 1 362 569 350 554 4.17e-17 86.7
MS.gene058555.t1 MTR_1g079790 25.481 208 152 1 362 569 350 554 4.21e-17 87.0
MS.gene058555.t1 MTR_7g116330 21.038 366 232 3 370 735 362 670 1.49e-14 78.6
MS.gene058555.t1 MTR_7g116330 33.871 124 62 4 860 980 638 744 1.08e-11 69.3
MS.gene058555.t1 MTR_8g063580 32.520 123 68 2 864 986 15 122 7.66e-13 67.4
MS.gene058555.t1 MTR_1g073840 31.387 137 74 4 856 991 630 747 1.61e-12 72.0
MS.gene058555.t1 MTR_1g073840 29.530 149 105 0 362 510 344 492 1.07e-11 69.3
MS.gene058555.t1 MTR_8g019680 39.560 91 37 3 901 990 73 146 4.32e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058555.t1 AT2G01830 71.082 989 256 12 25 1003 101 1069 0.0 1398
MS.gene058555.t1 AT2G01830 71.082 989 256 12 25 1003 89 1057 0.0 1397
MS.gene058555.t1 AT2G01830 71.082 989 256 12 25 1003 89 1057 0.0 1397
MS.gene058555.t1 AT2G01830 71.082 989 256 12 25 1003 89 1057 0.0 1397
MS.gene058555.t1 AT2G01830 71.082 989 256 12 25 1003 89 1057 0.0 1397
MS.gene058555.t1 AT2G01830 71.082 989 256 12 25 1003 112 1080 0.0 1397
MS.gene058555.t1 AT5G35750 54.428 1005 392 16 16 995 211 1174 0.0 1018
MS.gene058555.t1 AT1G27320 53.992 952 373 13 68 996 121 1030 0.0 979
MS.gene058555.t1 AT2G17820 32.754 345 180 7 336 670 451 753 1.45e-41 166
MS.gene058555.t1 AT5G10720 35.254 295 142 6 386 680 369 614 1.00e-40 163
MS.gene058555.t1 AT5G10720 34.028 144 83 2 862 994 779 921 8.79e-16 82.8
MS.gene058555.t1 AT1G66340 28.112 466 255 11 377 835 337 729 3.75e-35 144
MS.gene058555.t1 AT1G66340 28.058 139 84 3 860 997 609 732 5.19e-11 67.4
MS.gene058555.t1 AT2G47430 30.723 332 183 11 372 690 384 681 1.16e-30 131
MS.gene058555.t1 AT2G47430 36.364 143 60 5 857 983 982 1109 5.46e-16 84.0
MS.gene058555.t1 AT2G40940 30.952 336 167 7 356 680 306 587 1.34e-27 119
MS.gene058555.t1 AT3G04580 32.867 143 78 4 856 996 637 763 4.50e-13 73.9
MS.gene058555.t1 AT3G04580 32.867 143 78 4 856 996 637 763 4.50e-13 73.9
MS.gene058555.t1 AT4G18130 31.034 145 98 2 388 531 875 1018 2.42e-11 68.6

Find 233 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 4.4:-1839027 None:intergenic
TGAATTCCATTTACCTATAT+TGG 0.177421 4.4:+1840457 MS.gene058555:CDS
TGTCATGAATCTACTGAAAT+AGG 0.183473 4.4:-1840608 None:intergenic
CATGAAAGTAAGCTTGATTT+TGG 0.185418 4.4:+1837283 MS.gene058555:CDS
TCCAATTTGGCGGTGCCTTC+TGG 0.187946 4.4:-1837439 None:intergenic
CAAACATACCCGTCCATTTC+TGG 0.199510 4.4:-1839981 None:intergenic
TGCTGGTCATCAAGCAATTT+TGG 0.203159 4.4:+1837177 MS.gene058555:CDS
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 4.4:+1839719 MS.gene058555:CDS
TGAGAACCCAACAACCTAAA+AGG 0.270552 4.4:-1836716 None:intergenic
TTCTCAAATTAATGTTTCTA+TGG 0.271180 4.4:+1835979 MS.gene058555:CDS
CAAGTTTGATGCTTGCTTCA+TGG 0.271579 4.4:+1839947 MS.gene058555:CDS
TTGAAGCAACTCGTCGAATT+CGG 0.272691 4.4:+1840378 MS.gene058555:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 4.4:+1836061 MS.gene058555:CDS
CAAAATCAAGCTTACTTTCA+TGG 0.285290 4.4:-1837282 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.295381 4.4:-1837234 None:intergenic
GGCTTTAAGCCCTCTAAAAC+TGG 0.307736 4.4:-1839070 None:intergenic
ACCAGAAGGCACCGCCAAAT+TGG 0.310432 4.4:+1837438 MS.gene058555:CDS
TCATGGCCAATATAGGTAAA+TGG 0.311222 4.4:-1840463 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 4.4:-1838708 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 4.4:+1840379 MS.gene058555:CDS
GGATCTCCCATAACAATATC+TGG 0.330567 4.4:-1838301 None:intergenic
CAGAAGGGTTTCTGTAATAA+TGG 0.331115 4.4:-1836178 None:intergenic
CTGCTGATGAACGCAACAAC+TGG 0.339209 4.4:+1838671 MS.gene058555:CDS
AGCTCGACTTCTAGAAATTA+TGG 0.341838 4.4:+1838871 MS.gene058555:CDS
CTTAAAGCCGTTGTGGTTGA+TGG 0.345003 4.4:+1839084 MS.gene058555:CDS
AATGAACTTTAACAAATATA+TGG 0.345150 4.4:-1838528 None:intergenic
ATCATTTGATGTTTCCTGTA+TGG 0.346790 4.4:-1837310 None:intergenic
TTTGTGATTCTTCTATTAAT+CGG 0.350778 4.4:+1837488 MS.gene058555:CDS
TTCGAAAGGCCGCTACTTAG+TGG 0.361977 4.4:+1836359 MS.gene058555:CDS
GGATATTCAAATGCCAGAAA+TGG 0.363538 4.4:+1839968 MS.gene058555:CDS
TAATGAGCTCTTCTGTTGTT+GGG 0.368418 4.4:-1836793 None:intergenic
TTCCTTTCTCGGCCCAAGAT+AGG 0.368808 4.4:+1838821 MS.gene058555:CDS
TTATGAACAAGTCACCTTGA+TGG 0.371342 4.4:+1838771 MS.gene058555:CDS
TCGTATCATCTACAGCAAAA+TGG 0.371487 4.4:+1836025 MS.gene058555:CDS
AATTTACTTGGTCAACTTGC+TGG 0.372381 4.4:+1837160 MS.gene058555:CDS
TTAATGAGCTCTTCTGTTGT+TGG 0.375076 4.4:-1836794 None:intergenic
TAAGTGCCTAGTTGAACTAA+TGG 0.375538 4.4:+1838921 MS.gene058555:CDS
AGAGAGGACATCATCAAGTA+TGG 0.384226 4.4:-1838083 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 4.4:-1839111 None:intergenic
AAGGCATGAAAATCCTATCT+TGG 0.386310 4.4:-1838834 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 4.4:-1838568 None:intergenic
GGGAGCTTAGATTTGTAAAC+AGG 0.386741 4.4:-1836764 None:intergenic
GATCTTCAGTGTGCGCCAAC+TGG 0.387077 4.4:+1839551 MS.gene058555:CDS
GGTTGACACTAACACTGAAT+TGG 0.390644 4.4:-1836121 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.392434 4.4:-1837233 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 4.4:-1840470 None:intergenic
AAAGAGAGGCTTCACCGGTT+AGG 0.399569 4.4:+1836462 MS.gene058555:CDS
AGTCGCAAATGCCATCAATA+AGG 0.400064 4.4:+1839167 MS.gene058555:CDS
AAACATCACCTTCTTCGTAT+TGG 0.401351 4.4:-1837252 None:intergenic
AAAGTTCCAGATATTGTTAT+GGG 0.403106 4.4:+1838295 MS.gene058555:CDS
GAAGCCACTGAGAGCTAGTA+TGG 0.403349 4.4:+1839692 MS.gene058555:CDS
AAGAGAGGCTTCACCGGTTA+GGG 0.409347 4.4:+1836463 MS.gene058555:CDS
TAAAGTTCCAGATATTGTTA+TGG 0.411623 4.4:+1838294 MS.gene058555:CDS
TAAAGATTCTCTTCCTCAAA+AGG 0.411974 4.4:-1840554 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 4.4:+1836081 MS.gene058555:CDS
AACAGAAAGCCCGCAACAAA+TGG 0.414966 4.4:+1838559 MS.gene058555:CDS
GTTTCTATGGATTCTTCTGA+TGG 0.417958 4.4:+1835992 MS.gene058555:CDS
CGAACTGAAGTTGAACCATT+AGG 0.418453 4.4:-1839777 None:intergenic
TGTGTCGAAGACACTGGAAT+TGG 0.420012 4.4:+1838796 MS.gene058555:CDS
ATTTAAAACTTACCCTGTGC+TGG 0.423978 4.4:-1839220 None:intergenic
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 4.4:-1838569 None:intergenic
TCAGTGTGCGCCAACTGGAC+TGG 0.427277 4.4:+1839556 MS.gene058555:CDS
CAAATTGTAACAAATCTTGT+TGG 0.428971 4.4:+1838337 MS.gene058555:CDS
TGGAATTGGAATTCCTTTCT+CGG 0.432442 4.4:+1838810 MS.gene058555:CDS
TACTAATATTCGTAGCTAGA+AGG 0.432556 4.4:-1839617 None:intergenic
GATATTGTTATGGGAGATCC+TGG 0.437067 4.4:+1838304 MS.gene058555:CDS
GTCTAGACACAAAGGTTTAG+AGG 0.439244 4.4:+1838120 MS.gene058555:CDS
GTAGTAAGTGCTGTCCAATT+TGG 0.439787 4.4:-1837452 None:intergenic
CTTCTGTTGTTGGGTTGTGA+GGG 0.443892 4.4:-1836784 None:intergenic
TTACCTAAAATGCCATTCAT+AGG 0.447126 4.4:-1837752 None:intergenic
TTCAAAGTTACAAGAACAAA+CGG 0.447804 4.4:+1835914 MS.gene058555:CDS
AATTATGGTGGTACCGGCAT+TGG 0.449454 4.4:+1838886 MS.gene058555:CDS
ATAATGAGAGCTAGAGCTAC+TGG 0.450935 4.4:+1836674 MS.gene058555:CDS
GCAGAATCAGCACCACCCTT+TGG 0.456173 4.4:+1835890 MS.gene058555:CDS
CATTCTGTTTCCAGTCCAGT+TGG 0.457489 4.4:-1839566 None:intergenic
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 4.4:+1836082 MS.gene058555:CDS
TCCAATAACTGAGGTGAAGA+AGG 0.463469 4.4:+1839026 MS.gene058555:CDS
AAGAGCAGCTTTGCCGCTAT+CGG 0.467101 4.4:-1839904 None:intergenic
TCTTCTGTTGTTGGGTTGTG+AGG 0.467157 4.4:-1836785 None:intergenic
ATAGAAGAATCACAAAGAAT+AGG 0.470666 4.4:-1837481 None:intergenic
AGGCATGAAAATCCTATCTT+GGG 0.473309 4.4:-1838833 None:intergenic
AATAAGGCTGTTTCCTTGTG+TGG 0.480317 4.4:+1839183 MS.gene058555:CDS
AGTATGGAACGAAGGTCAAA+TGG 0.481414 4.4:-1838067 None:intergenic
TCACTTGTGGAAAATTTACT+TGG 0.482007 4.4:+1837148 MS.gene058555:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 4.4:+1839132 MS.gene058555:CDS
GTCAAATAAACTTTATAAGC+CGG 0.482875 4.4:+1838947 MS.gene058555:CDS
ACTGATCCCCTAATCATGTA+TGG 0.483235 4.4:+1837226 MS.gene058555:CDS
GAGCTATCTGCCTGAACAAA+AGG 0.486203 4.4:-1838853 None:intergenic
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 4.4:+1839529 MS.gene058555:CDS
TCAAAGTTACAAGAACAAAC+GGG 0.487197 4.4:+1835915 MS.gene058555:CDS
TCATGGGTTTGTGGAGAGGA+CGG 0.487640 4.4:+1839528 MS.gene058555:CDS
GGTGCATACTCATCCCTAAC+CGG 0.487653 4.4:-1836476 None:intergenic
CAAGGAAACAGCCTTATTGA+TGG 0.489776 4.4:-1839178 None:intergenic
AAGTGCCTAGTTGAACTAAT+GGG 0.492093 4.4:+1838922 MS.gene058555:CDS
AGGCGCCTGCAGCCACCCTC+CGG 0.492109 4.4:-1839851 None:intergenic
CTTGTAACTTTGAAGCCAAA+GGG 0.494324 4.4:-1835905 None:intergenic
TCAGTTCGAAGCCTTCTGTT+CGG 0.494919 4.4:+1839792 MS.gene058555:CDS
CATCTACAGCAAAATGGATG+TGG 0.495343 4.4:+1836031 MS.gene058555:CDS
TCATTCAAGCACATAGAGCT+TGG 0.496464 4.4:+1835955 MS.gene058555:CDS
GAGAACCCAACAACCTAAAA+GGG 0.497618 4.4:-1836715 None:intergenic
ATCCTATCTTGGGCCGAGAA+AGG 0.498744 4.4:-1838823 None:intergenic
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 4.4:-1839137 None:intergenic
GCATCAAACTTGTGAGGGAA+TGG 0.500753 4.4:-1839936 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 4.4:+1838583 MS.gene058555:CDS
GGAAACATCAAATGATATGT+AGG 0.503498 4.4:+1837317 MS.gene058555:CDS
AAAATCCGCGGTAAATGAAA+AGG 0.506447 4.4:-1838986 None:intergenic
GGATGATTTCCACGAAATGC+AGG 0.506772 4.4:+1837553 MS.gene058555:CDS
GAGTCGATTGATATGATGTC+TGG 0.510772 4.4:+1836533 MS.gene058555:CDS
GATGGAGAGGACAGCGAATG+AGG 0.511200 4.4:+1840403 MS.gene058555:CDS
TTAATTGGAGGCAGATATGT+TGG 0.514349 4.4:+1837106 MS.gene058555:intron
TTTATAAGCCGGCCGCAGGT+TGG 0.515174 4.4:+1838958 MS.gene058555:CDS
CTGGGAAAAGAGACGCCTAA+TGG 0.517830 4.4:+1839762 MS.gene058555:CDS
TCTTGTAACTTTGAAGCCAA+AGG 0.517848 4.4:-1835906 None:intergenic
TGCACCGGTCATATTTGCTC+AGG 0.519789 4.4:+1836493 MS.gene058555:CDS
TTAAAGCCGTTGTGGTTGAT+GGG 0.520906 4.4:+1839085 MS.gene058555:CDS
TGAAGCTGGCAAATTAGAGC+TGG 0.522160 4.4:+1838036 MS.gene058555:CDS
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 4.4:+1840510 MS.gene058555:CDS
GAAATTAGAACACCTATGAA+TGG 0.524054 4.4:+1837740 MS.gene058555:CDS
TATAATCTCAAAACGCTAAG+TGG 0.524296 4.4:+1838640 MS.gene058555:CDS
AACAGGCAAGAAGAGACAGC+TGG 0.524546 4.4:+1839743 MS.gene058555:CDS
TTGTTCATAAAATTCATTCG+AGG 0.525613 4.4:-1838758 None:intergenic
AACACTCTTCATATGTAGCA+TGG 0.525664 4.4:-1840499 None:intergenic
CTTTGATGTGGAGTCACTTG+TGG 0.526300 4.4:+1837135 MS.gene058555:CDS
TGTATGATTGTAGGAATGCT+TGG 0.526473 4.4:+1837899 MS.gene058555:intron
TCTAGAAATTATGGTGGTAC+CGG 0.530180 4.4:+1838880 MS.gene058555:CDS
ATGGATTACATCTGCTGTCA+TGG 0.530208 4.4:-1840480 None:intergenic
TTCAAATGCCAGAAATGGAC+GGG 0.532095 4.4:+1839973 MS.gene058555:CDS
TACTAAAGTGAGAAGGAAAG+AGG 0.533010 4.4:+1836055 MS.gene058555:CDS
GTAAACCGGAGGGTGGCTGC+AGG 0.533229 4.4:+1839846 MS.gene058555:CDS
AATGGAAAGAGAGGCTTCAC+CGG 0.534549 4.4:+1836457 MS.gene058555:CDS
AAACCCTTCTGCCATTGACC+AGG 0.535215 4.4:+1836190 MS.gene058555:CDS
TCAAGCACAAACCTGGTCAA+TGG 0.536283 4.4:-1836201 None:intergenic
AGCCGATGTTGCCAAGTCAC+AGG 0.537666 4.4:+1837598 MS.gene058555:CDS
ATGGTCTGTGTCGAAGACAC+TGG 0.538586 4.4:+1838790 MS.gene058555:CDS
AACTCGTCGAATTCGGGAGA+TGG 0.539466 4.4:+1840385 MS.gene058555:CDS
AAACTTTATAAGCCGGCCGC+AGG 0.541024 4.4:+1838954 MS.gene058555:CDS
TGTTTGAAATGTGGGATGGA+TGG 0.544805 4.4:+1840518 MS.gene058555:CDS
TTTGATAAAGCTAAATCCGC+AGG 0.546457 4.4:+1839648 MS.gene058555:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 4.4:-1839725 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 4.4:+1836725 MS.gene058555:CDS
GTCGAATTCGGGAGATGGAG+AGG 0.549539 4.4:+1840390 MS.gene058555:CDS
ATAAGGCTGTTTCCTTGTGT+GGG 0.549996 4.4:+1839184 MS.gene058555:CDS
GAGCTCATTAAAGCGACCGC+AGG 0.550704 4.4:+1836806 MS.gene058555:CDS
TGCTGATGAACGCAACAACT+GGG 0.552352 4.4:+1838672 MS.gene058555:CDS
GACCGAGCGAAAATTGAAGC+TGG 0.556250 4.4:+1838022 MS.gene058555:CDS
GAGAAGGATTCATGGGTTTG+TGG 0.557947 4.4:+1839519 MS.gene058555:CDS
ATTGGAGGCAGATATGTTGG+AGG 0.558944 4.4:+1837109 MS.gene058555:intron
AGTCTGAGCATAGTCACGTT+GGG 0.560336 4.4:-1837951 None:intergenic
GTAGCTAGAAGGATCATTTG+AGG 0.560581 4.4:-1839606 None:intergenic
GGATTCATGGGTTTGTGGAG+AGG 0.561266 4.4:+1839524 MS.gene058555:CDS
AGGTGCTTCCAACCTGCGGC+CGG 0.562519 4.4:-1838966 None:intergenic
GACTGCTCAAGCATGTGGTA+AGG 0.562826 4.4:+1837970 MS.gene058555:CDS
GATACCATTTGAAGAGACTT+GGG 0.564437 4.4:+1839133 MS.gene058555:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 4.4:-1838899 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 4.4:+1840509 MS.gene058555:CDS
GTTAACAACTCTTTGTGCAT+AGG 0.567415 4.4:-1836387 None:intergenic
ACAATTTGTCTGAATCTCCC+AGG 0.568802 4.4:-1838322 None:intergenic
GTTTCCTGAGCAAATATGAC+CGG 0.569475 4.4:-1836497 None:intergenic
AAGGAAAAGTACCTGTGACT+TGG 0.570868 4.4:-1837609 None:intergenic
CACAAGTGACTCCACATCAA+AGG 0.571996 4.4:-1837134 None:intergenic
TATAAAGACAATGGAAAGAG+AGG 0.575171 4.4:+1836448 MS.gene058555:CDS
GTTTGAGAAGCAGCATGGAG+TGG 0.575227 4.4:+1836424 MS.gene058555:CDS
TAGAGGGCTTAAAGCCGTTG+TGG 0.575392 4.4:+1839077 MS.gene058555:CDS
GTAAGTGCTGTCCAATTTGG+CGG 0.576260 4.4:-1837449 None:intergenic
CTTGAGACTTATCGAAATGG+AGG 0.580908 4.4:+1838586 MS.gene058555:CDS
ACAGCGAATGAGGAGATGAA+TGG 0.581908 4.4:+1840413 MS.gene058555:CDS
TATGGCAACCAATACGAAGA+AGG 0.582214 4.4:+1837244 MS.gene058555:CDS
CCACTGAGAGCTAGTATGGT+GGG 0.584057 4.4:+1839696 MS.gene058555:CDS
CAAACCTGGTCAATGGCAGA+AGG 0.584600 4.4:-1836194 None:intergenic
TACCTGTGACTTGGCAACAT+CGG 0.584979 4.4:-1837600 None:intergenic
TGTTCTAATTTCATGAGAGA+CGG 0.585556 4.4:-1837729 None:intergenic
CTTAAATATTCCAAAATCCG+CGG 0.588225 4.4:-1838998 None:intergenic
GCTTGGTCTGCTTCTACGCA+CGG 0.590241 4.4:+1837916 MS.gene058555:CDS
ATTCAAATGCCAGAAATGGA+CGG 0.591431 4.4:+1839972 MS.gene058555:CDS
AGCAAGCATCAAACTTGTGA+GGG 0.592861 4.4:-1839941 None:intergenic
TAATGAGAGCTAGAGCTACT+GGG 0.593885 4.4:+1836675 MS.gene058555:CDS
ATCTACAGCAAAATGGATGT+GGG 0.595017 4.4:+1836032 MS.gene058555:CDS
TGGAGTGGTTATAAAGACAA+TGG 0.596726 4.4:+1836439 MS.gene058555:CDS
TTGATGACAATGGAGTAAAC+CGG 0.599633 4.4:+1839832 MS.gene058555:CDS
ACTCTTCATCAGCAATTAGG+TGG 0.601724 4.4:-1838705 None:intergenic
GAGCAGTTTGAGAAGCAGCA+TGG 0.604333 4.4:+1836419 MS.gene058555:CDS
ATGGAAAGTTGAAACAAGGA+TGG 0.605809 4.4:-1836159 None:intergenic
ACAGGCAAGAAGAGACAGCT+GGG 0.606308 4.4:+1839744 MS.gene058555:CDS
GGAGCTAAAAGTTCGAGCAG+AGG 0.610100 4.4:+1837574 MS.gene058555:CDS
CAACTGGACTGGAAACAGAA+TGG 0.610211 4.4:+1839567 MS.gene058555:CDS
GGATGGCAAGAGCATGAACA+TGG 0.613468 4.4:-1836142 None:intergenic
AAGCAAGCATCAAACTTGTG+AGG 0.615739 4.4:-1839942 None:intergenic
CAGTCTGAGCATAGTCACGT+TGG 0.615929 4.4:-1837952 None:intergenic
AAGTAGCGGCCTTTCGAAAG+CGG 0.618779 4.4:-1836354 None:intergenic
TTAAGCCCTCTAAAACTGGA+TGG 0.620083 4.4:-1839066 None:intergenic
GATGTGAAGTGTGCCGATAG+CGG 0.620620 4.4:+1839891 MS.gene058555:CDS
TCAGAGAAGTCTAGACACAA+AGG 0.620996 4.4:+1838112 MS.gene058555:CDS
AGCTCATTAAAGCGACCGCA+GGG 0.621429 4.4:+1836807 MS.gene058555:CDS
TGGTTGCCATACATGATTAG+GGG 0.623830 4.4:-1837232 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 4.4:+1840514 MS.gene058555:CDS
GAGGAGATGAATGGTGAATG+TGG 0.627003 4.4:+1840422 MS.gene058555:CDS
TGTTGGAGGATCCTTTGATG+TGG 0.629395 4.4:+1837123 MS.gene058555:CDS
GTCTTCGACACAGACCATCA+AGG 0.633984 4.4:-1838785 None:intergenic
TTGAGACTTATCGAAATGGA+GGG 0.635447 4.4:+1838587 MS.gene058555:CDS
AAACCTGGTCAATGGCAGAA+GGG 0.635904 4.4:-1836193 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 4.4:+1836345 MS.gene058555:CDS
TTTGTACAGGTATCACCAGA+AGG 0.636717 4.4:+1837424 MS.gene058555:intron
TGGCAAATTAGAGCTGGAAG+CGG 0.637994 4.4:+1838042 MS.gene058555:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 4.4:+1836730 MS.gene058555:CDS
AAAATGGTGCTTCCAGCACA+GGG 0.643044 4.4:+1839208 MS.gene058555:CDS
GAATCATATTGTCAAAGTAG+AGG 0.643202 4.4:+1837532 MS.gene058555:CDS
TGAATGGTGAATGTGGTGAA+AGG 0.644035 4.4:+1840429 MS.gene058555:CDS
ATGTGGGTACTAAAGTGAGA+AGG 0.644167 4.4:+1836048 MS.gene058555:CDS
ATACTGCAGTTCACTGAGCG+AGG 0.645750 4.4:+1838505 MS.gene058555:intron
GACCACCCATTAGTTCAACT+AGG 0.646099 4.4:-1838927 None:intergenic
GGTTAGGGATGAGTATGCAC+CGG 0.649698 4.4:+1836478 MS.gene058555:CDS
GCCACTGAGAGCTAGTATGG+TGG 0.649946 4.4:+1839695 MS.gene058555:CDS
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 4.4:-1835902 None:intergenic
GCTCAGACTGCTCAAGCATG+TGG 0.653633 4.4:+1837965 MS.gene058555:CDS
CACCGTATCACTAAAACCTG+CGG 0.656600 4.4:-1839664 None:intergenic
AATAATGGAAAGTTGAAACA+AGG 0.658333 4.4:-1836163 None:intergenic
GATTGATATGATGTCTGGAG+AGG 0.658590 4.4:+1836538 MS.gene058555:CDS
ACATCATATCAATCGACTCA+AGG 0.660613 4.4:-1836529 None:intergenic
GAAGTTGTGCATGCATCTAG+CGG 0.666517 4.4:+1838616 MS.gene058555:CDS
TAAGAAGAATCCAATAACTG+AGG 0.666691 4.4:+1839017 MS.gene058555:CDS
ATATTGTTATGGGAGATCCT+GGG 0.667347 4.4:+1838305 MS.gene058555:CDS
CAATGGAGTAAACCGGAGGG+TGG 0.669359 4.4:+1839839 MS.gene058555:CDS
CATCATCAAGTATGGAACGA+AGG 0.675752 4.4:-1838075 None:intergenic
TGCCTAGTTGAACTAATGGG+TGG 0.680573 4.4:+1838925 MS.gene058555:CDS
AAGGCCGCTACTTAGTGGAG+TGG 0.681896 4.4:+1836364 MS.gene058555:CDS
GAAAAGGTGCTTCCAACCTG+CGG 0.683040 4.4:-1838970 None:intergenic
TCGACTTCTAGAAATTATGG+TGG 0.683726 4.4:+1838874 MS.gene058555:CDS
ATGACAATGGAGTAAACCGG+AGG 0.689272 4.4:+1839835 MS.gene058555:CDS
TGACAATGGAGTAAACCGGA+GGG 0.689626 4.4:+1839836 MS.gene058555:CDS
CAAAGTTACAAGAACAAACG+GGG 0.690015 4.4:+1835916 MS.gene058555:CDS
AGGTTTCCCATCAACCACAA+CGG 0.697501 4.4:-1839091 None:intergenic
CCCACCATACTAGCTCTCAG+TGG 0.729319 4.4:-1839696 None:intergenic
TAGGCCACTCCACTAAGTAG+CGG 0.749192 4.4:-1836368 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAACAAG+CGG - chr4.4:1836592-1836611 None:intergenic 10.0%
!! TTCATAATAATATCTTAATT+TGG + chr4.4:1838188-1838207 MS.gene058555:intron 10.0%
!!! TCGATTATTAAATTTTTTTT+TGG + chr4.4:1840010-1840029 MS.gene058555:intron 10.0%
!!! TTGTTTTTTTTTTTTTTTTG+TGG + chr4.4:1836593-1836612 MS.gene058555:intron 10.0%
!! AAAGGTAAAATGAAAAAAAA+AGG - chr4.4:1838249-1838268 None:intergenic 15.0%
!! AATGAACTTTAACAAATATA+TGG - chr4.4:1838531-1838550 None:intergenic 15.0%
!! ATATACAAACAAATATAGTA+TGG - chr4.4:1840264-1840283 None:intergenic 15.0%
!! ATTAACTGAGTTAAAATATT+TGG + chr4.4:1839459-1839478 MS.gene058555:intron 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+AGG + chr4.4:1836596-1836615 MS.gene058555:intron 15.0%
!! ATTATTAATGAGAAAGTGAA+AGG - chr4.4:1837859-1837878 None:intergenic 20.0%
!! GTGTTTACTATAAAAATCTT+AGG + chr4.4:1836916-1836935 MS.gene058555:intron 20.0%
!! TATTATTATGAAACTCGTAT+TGG - chr4.4:1838180-1838199 None:intergenic 20.0%
!! TTAGTAATGCAAATAACTTT+AGG - chr4.4:1838403-1838422 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG - chr4.4:1839504-1839523 None:intergenic 20.0%
!! TTTGTGATTCTTCTATTAAT+CGG + chr4.4:1837488-1837507 MS.gene058555:CDS 20.0%
!!! ATTAATGACTTTTTAATTGG+AGG + chr4.4:1837094-1837113 MS.gene058555:intron 20.0%
!!! ATTTTTAGTGAACTAATGTT+AGG + chr4.4:1839270-1839289 MS.gene058555:intron 20.0%
!!! GTGATTAATGACTTTTTAAT+TGG + chr4.4:1837091-1837110 MS.gene058555:intron 20.0%
!!! TGATATTATTTTTGTTGAGA+AGG + chr4.4:1839503-1839522 MS.gene058555:CDS 20.0%
!!! TTAATCGGTTACATTTTATA+TGG + chr4.4:1837503-1837522 MS.gene058555:CDS 20.0%
!!! TTCTCAAATTAATGTTTCTA+TGG + chr4.4:1835979-1835998 MS.gene058555:CDS 20.0%
! AAAAAAAAAAAAACAAGCGG+TGG - chr4.4:1836589-1836608 None:intergenic 25.0%
! AAAGTTCCAGATATTGTTAT+GGG + chr4.4:1838295-1838314 MS.gene058555:CDS 25.0%
! AATCATCAAATAATCATCAG+AGG - chr4.4:1836297-1836316 None:intergenic 25.0%
! ACACATAACATGTATAGATA+TGG - chr4.4:1840290-1840309 None:intergenic 25.0%
! AGTTGACAATTAGTGAAATA+AGG - chr4.4:1836838-1836857 None:intergenic 25.0%
! ATAGAAGAATCACAAAGAAT+AGG - chr4.4:1837484-1837503 None:intergenic 25.0%
! CAAATTGTAACAAATCTTGT+TGG + chr4.4:1838337-1838356 MS.gene058555:CDS 25.0%
! GCAATGCATTAATTACAAAA+AGG - chr4.4:1839249-1839268 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG + chr4.4:1838947-1838966 MS.gene058555:CDS 25.0%
! TAAAGTTCCAGATATTGTTA+TGG + chr4.4:1838294-1838313 MS.gene058555:CDS 25.0%
! TAACATTGAATTTATCAGCA+AGG - chr4.4:1840127-1840146 None:intergenic 25.0%
! TACTAATATGCATGTTATGT+TGG + chr4.4:1838417-1838436 MS.gene058555:intron 25.0%
! TGAATTCCATTTACCTATAT+TGG + chr4.4:1840457-1840476 MS.gene058555:CDS 25.0%
! TGAGTTAAAATATTTGGTTG+TGG + chr4.4:1839465-1839484 MS.gene058555:intron 25.0%
! TGTTTCATATGAGTAATTAG+AGG + chr4.4:1836884-1836903 MS.gene058555:intron 25.0%
! TTAGATCATCAAATAAAGAG+AGG - chr4.4:1838217-1838236 None:intergenic 25.0%
! TTCAAAGTTACAAGAACAAA+CGG + chr4.4:1835914-1835933 MS.gene058555:CDS 25.0%
! TTGTTCATAAAATTCATTCG+AGG - chr4.4:1838761-1838780 None:intergenic 25.0%
!! AATAATGGAAAGTTGAAACA+AGG - chr4.4:1836166-1836185 None:intergenic 25.0%
!! CATGTACTAACATTATTTTC+AGG + chr4.4:1840354-1840373 MS.gene058555:intron 25.0%
!! TTATGATCAAACTTTTGTAC+AGG + chr4.4:1837411-1837430 MS.gene058555:intron 25.0%
!!! GAAAGCATATGTTACATTTT+AGG - chr4.4:1837833-1837852 None:intergenic 25.0%
AAAACTCTTCATCAGCAATT+AGG - chr4.4:1838711-1838730 None:intergenic 30.0%
AATCATCAGAGGATACATAA+AGG - chr4.4:1836286-1836305 None:intergenic 30.0%
ACAAAACTCTGTATGATTGT+AGG + chr4.4:1837890-1837909 MS.gene058555:intron 30.0%
ACATCAAATGATATGTAGGT+AGG + chr4.4:1837321-1837340 MS.gene058555:intron 30.0%
AGTTATTGTTGCGTAATCAA+AGG - chr4.4:1837670-1837689 None:intergenic 30.0%
ATCATTTGATGTTTCCTGTA+TGG - chr4.4:1837313-1837332 None:intergenic 30.0%
CAAAATCAAGCTTACTTTCA+TGG - chr4.4:1837285-1837304 None:intergenic 30.0%
CAACAAAAATAATATCAGGC+TGG - chr4.4:1839500-1839519 None:intergenic 30.0%
CTTAAATATTCCAAAATCCG+CGG - chr4.4:1839001-1839020 None:intergenic 30.0%
GAAATTAGAACACCTATGAA+TGG + chr4.4:1837740-1837759 MS.gene058555:CDS 30.0%
GAATCATATTGTCAAAGTAG+AGG + chr4.4:1837532-1837551 MS.gene058555:CDS 30.0%
GGAAACATCAAATGATATGT+AGG + chr4.4:1837317-1837336 MS.gene058555:CDS 30.0%
TAAAGATTCTCTTCCTCAAA+AGG - chr4.4:1840557-1840576 None:intergenic 30.0%
TAAGAAGAATCCAATAACTG+AGG + chr4.4:1839017-1839036 MS.gene058555:CDS 30.0%
TACTAATATTCGTAGCTAGA+AGG - chr4.4:1839620-1839639 None:intergenic 30.0%
TATAAAGACAATGGAAAGAG+AGG + chr4.4:1836448-1836467 MS.gene058555:CDS 30.0%
TATAATCTCAAAACGCTAAG+TGG + chr4.4:1838640-1838659 MS.gene058555:CDS 30.0%
TATGAGTAATTAGAGGATGA+AGG + chr4.4:1836891-1836910 MS.gene058555:intron 30.0%
TCAAAGTTACAAGAACAAAC+GGG + chr4.4:1835915-1835934 MS.gene058555:CDS 30.0%
TCACTTGTGGAAAATTTACT+TGG + chr4.4:1837148-1837167 MS.gene058555:CDS 30.0%
TGTTCTAATTTCATGAGAGA+CGG - chr4.4:1837732-1837751 None:intergenic 30.0%
TTAAAATATTTGGTTGTGGC+AGG + chr4.4:1839469-1839488 MS.gene058555:intron 30.0%
TTACCTAAAATGCCATTCAT+AGG - chr4.4:1837755-1837774 None:intergenic 30.0%
! AAATTTTCTTTCCGAACAGA+AGG - chr4.4:1839806-1839825 None:intergenic 30.0%
! CATGAAAGTAAGCTTGATTT+TGG + chr4.4:1837283-1837302 MS.gene058555:CDS 30.0%
! CTACTGTACATTACATTTTC+TGG + chr4.4:1837353-1837372 MS.gene058555:intron 30.0%
! GGAAACTTTTGCAGAATATA+CGG + chr4.4:1836325-1836344 MS.gene058555:intron 30.0%
! GTTACATTTTATATGGTGCT+GGG + chr4.4:1837510-1837529 MS.gene058555:CDS 30.0%
! GTTCGGAAAGAAAATTTTAG+TGG + chr4.4:1839809-1839828 MS.gene058555:CDS 30.0%
! TTATGTCTCAAAACCTTTTG+AGG + chr4.4:1840541-1840560 MS.gene058555:CDS 30.0%
! TTATTTGATGATTTCCCTTC+AGG + chr4.4:1836304-1836323 MS.gene058555:intron 30.0%
! TTCATTTTACCTTTCTTAGC+TGG + chr4.4:1838255-1838274 MS.gene058555:intron 30.0%
! TTTTGTTGAGAAGGATTCAT+GGG + chr4.4:1839512-1839531 MS.gene058555:CDS 30.0%
! TTTTTGTTGAGAAGGATTCA+TGG + chr4.4:1839511-1839530 MS.gene058555:CDS 30.0%
!! AAGTTTTGATCATTCTGTGT+TGG + chr4.4:1836224-1836243 MS.gene058555:intron 30.0%
!! AGAAAACTGTTTCTGTTACA+AGG + chr4.4:1837024-1837043 MS.gene058555:intron 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG + chr4.4:1840510-1840529 MS.gene058555:CDS 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG + chr4.4:1836637-1836656 MS.gene058555:intron 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG + chr4.4:1840509-1840528 MS.gene058555:CDS 30.0%
!!! ATTTTAGTGGTTGATGACAA+TGG + chr4.4:1839822-1839841 MS.gene058555:CDS 30.0%
AAAAAAAACAAGCGGTGGAA+TGG - chr4.4:1836584-1836603 None:intergenic 35.0%
AAAACTTTCAAGCACAAACC+TGG - chr4.4:1836211-1836230 None:intergenic 35.0%
AAAATCCGCGGTAAATGAAA+AGG - chr4.4:1838989-1839008 None:intergenic 35.0%
AAACATCACCTTCTTCGTAT+TGG - chr4.4:1837255-1837274 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG - chr4.4:1840502-1840521 None:intergenic 35.0%
AAGCTTGAGACTTATCGAAA+TGG + chr4.4:1838583-1838602 MS.gene058555:CDS 35.0%
AAGGCATGAAAATCCTATCT+TGG - chr4.4:1838837-1838856 None:intergenic 35.0%
AAGTGCCTAGTTGAACTAAT+GGG + chr4.4:1838922-1838941 MS.gene058555:CDS 35.0%
AATTTACTTGGTCAACTTGC+TGG + chr4.4:1837160-1837179 MS.gene058555:CDS 35.0%
AGATACCATTTGAAGAGACT+TGG + chr4.4:1839132-1839151 MS.gene058555:CDS 35.0%
AGGCATGAAAATCCTATCTT+GGG - chr4.4:1838836-1838855 None:intergenic 35.0%
AGTCACACATGAATCATGAT+AGG + chr4.4:1839324-1839343 MS.gene058555:intron 35.0%
ATATTGTTATGGGAGATCCT+GGG + chr4.4:1838305-1838324 MS.gene058555:CDS 35.0%
ATCTACAGCAAAATGGATGT+GGG + chr4.4:1836032-1836051 MS.gene058555:CDS 35.0%
ATGGAAAGTTGAAACAAGGA+TGG - chr4.4:1836162-1836181 None:intergenic 35.0%
ATTCAAATGCCAGAAATGGA+CGG + chr4.4:1839972-1839991 MS.gene058555:CDS 35.0%
ATTCTGCAAAAGTTTCCTGA+AGG - chr4.4:1836322-1836341 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG - chr4.4:1837237-1837256 None:intergenic 35.0%
CAAAGTTACAAGAACAAACG+GGG + chr4.4:1835916-1835935 MS.gene058555:CDS 35.0%
CAGAAGGGTTTCTGTAATAA+TGG - chr4.4:1836181-1836200 None:intergenic 35.0%
CGATGCTTCAACTAAAAAAG+TGG + chr4.4:1838735-1838754 MS.gene058555:CDS 35.0%
GATACCATTTGAAGAGACTT+GGG + chr4.4:1839133-1839152 MS.gene058555:CDS 35.0%
GATTCATGTGTGACTTTAGA+TGG - chr4.4:1839319-1839338 None:intergenic 35.0%
GGATATTCAAATGCCAGAAA+TGG + chr4.4:1839968-1839987 MS.gene058555:CDS 35.0%
GTTAACAACTCTTTGTGCAT+AGG - chr4.4:1836390-1836409 None:intergenic 35.0%
GTTTCTATGGATTCTTCTGA+TGG + chr4.4:1835992-1836011 MS.gene058555:CDS 35.0%
TAAGTGCCTAGTTGAACTAA+TGG + chr4.4:1838921-1838940 MS.gene058555:CDS 35.0%
TAATGAGCTCTTCTGTTGTT+GGG - chr4.4:1836796-1836815 None:intergenic 35.0%
TACTAAAGTGAGAAGGAAAG+AGG + chr4.4:1836055-1836074 MS.gene058555:CDS 35.0%
TCATGGCCAATATAGGTAAA+TGG - chr4.4:1840466-1840485 None:intergenic 35.0%
TCGTATCATCTACAGCAAAA+TGG + chr4.4:1836025-1836044 MS.gene058555:CDS 35.0%
TCTAGAAATTATGGTGGTAC+CGG + chr4.4:1838880-1838899 MS.gene058555:CDS 35.0%
TCTGTTACAAGGCTTGTATT+TGG + chr4.4:1837035-1837054 MS.gene058555:intron 35.0%
TGAAATAAGGATATACCCTG+CGG - chr4.4:1836825-1836844 None:intergenic 35.0%
TGGAATTGGAATTCCTTTCT+CGG + chr4.4:1838810-1838829 MS.gene058555:CDS 35.0%
TGGAGTGGTTATAAAGACAA+TGG + chr4.4:1836439-1836458 MS.gene058555:CDS 35.0%
TGTATGATTGTAGGAATGCT+TGG + chr4.4:1837899-1837918 MS.gene058555:intron 35.0%
TTAATGAGCTCTTCTGTTGT+TGG - chr4.4:1836797-1836816 None:intergenic 35.0%
TTAATTGGAGGCAGATATGT+TGG + chr4.4:1837106-1837125 MS.gene058555:intron 35.0%
TTATGAACAAGTCACCTTGA+TGG + chr4.4:1838771-1838790 MS.gene058555:CDS 35.0%
TTCTGCAAAAGTTTCCTGAA+GGG - chr4.4:1836321-1836340 None:intergenic 35.0%
TTGAGACTTATCGAAATGGA+GGG + chr4.4:1838587-1838606 MS.gene058555:CDS 35.0%
TTGGTTGCCATACATGATTA+GGG - chr4.4:1837236-1837255 None:intergenic 35.0%
TTTGATAAAGCTAAATCCGC+AGG + chr4.4:1839648-1839667 MS.gene058555:CDS 35.0%
! AACACTAATAGTGGCATTGA+CGG - chr4.4:1836976-1836995 None:intergenic 35.0%
! ACACCTATGAATGGCATTTT+AGG + chr4.4:1837749-1837768 MS.gene058555:CDS 35.0%
! ACATCATATCAATCGACTCA+AGG - chr4.4:1836532-1836551 None:intergenic 35.0%
! ACTTCTCTGAAAAAAGAGAG+AGG - chr4.4:1838102-1838121 None:intergenic 35.0%
! AGCTCGACTTCTAGAAATTA+TGG + chr4.4:1838871-1838890 MS.gene058555:CDS 35.0%
! ATTTAAAACTTACCCTGTGC+TGG - chr4.4:1839223-1839242 None:intergenic 35.0%
! GATTTTCATGCCTTTTGTTC+AGG + chr4.4:1838843-1838862 MS.gene058555:CDS 35.0%
! GGTTACATTTTATATGGTGC+TGG + chr4.4:1837509-1837528 MS.gene058555:CDS 35.0%
! TCGACTTCTAGAAATTATGG+TGG + chr4.4:1838874-1838893 MS.gene058555:CDS 35.0%
! TGTGTCGATAACACTAATAG+TGG - chr4.4:1836985-1837004 None:intergenic 35.0%
! TTGATGACAATGGAGTAAAC+CGG + chr4.4:1839832-1839851 MS.gene058555:CDS 35.0%
! TTTTCATTTACCGCGGATTT+TGG + chr4.4:1838988-1839007 MS.gene058555:CDS 35.0%
!! CTACTGAAATAGGTTTTGTC+TGG - chr4.4:1840601-1840620 None:intergenic 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG - chr4.4:1835908-1835927 None:intergenic 35.0%
!! GAATTGCATTTGTTGTTGTG+TGG + chr4.4:1839420-1839439 MS.gene058555:intron 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG - chr4.4:1835909-1835928 None:intergenic 35.0%
!! TTGATTTTGGAGATCCATAC+AGG + chr4.4:1837296-1837315 MS.gene058555:CDS 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG + chr4.4:1839061-1839080 MS.gene058555:CDS 35.0%
AAGCAAGCATCAAACTTGTG+AGG - chr4.4:1839945-1839964 None:intergenic 40.0%
ACAATTTGTCTGAATCTCCC+AGG - chr4.4:1838325-1838344 None:intergenic 40.0%
ACCTTCTTCACCTCAGTTAT+TGG - chr4.4:1839030-1839049 None:intergenic 40.0%
ACTCTTCATCAGCAATTAGG+TGG - chr4.4:1838708-1838727 None:intergenic 40.0%
ACTGATACTCAAACCAATGC+CGG - chr4.4:1838902-1838921 None:intergenic 40.0%
ACTGATCCCCTAATCATGTA+TGG + chr4.4:1837226-1837245 MS.gene058555:CDS 40.0%
AGAGAGGACATCATCAAGTA+TGG - chr4.4:1838086-1838105 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG - chr4.4:1839944-1839963 None:intergenic 40.0%
AGTATGGAACGAAGGTCAAA+TGG - chr4.4:1838070-1838089 None:intergenic 40.0%
AGTCGCAAATGCCATCAATA+AGG + chr4.4:1839167-1839186 MS.gene058555:CDS 40.0%
ATAATGAGAGCTAGAGCTAC+TGG + chr4.4:1836674-1836693 MS.gene058555:CDS 40.0%
ATGTGGGTACTAAAGTGAGA+AGG + chr4.4:1836048-1836067 MS.gene058555:CDS 40.0%
CAAGTTTGATGCTTGCTTCA+TGG + chr4.4:1839947-1839966 MS.gene058555:CDS 40.0%
CATCATCAAGTATGGAACGA+AGG - chr4.4:1838078-1838097 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG + chr4.4:1836031-1836050 MS.gene058555:CDS 40.0%
CGAACTGAAGTTGAACCATT+AGG - chr4.4:1839780-1839799 None:intergenic 40.0%
CGTTGCTAAACCTATTGTGA+AGG + chr4.4:1838154-1838173 MS.gene058555:intron 40.0%
CTTGAGACTTATCGAAATGG+AGG + chr4.4:1838586-1838605 MS.gene058555:CDS 40.0%
GAGAACCCAACAACCTAAAA+GGG - chr4.4:1836718-1836737 None:intergenic 40.0%
GAGTCGATTGATATGATGTC+TGG + chr4.4:1836533-1836552 MS.gene058555:CDS 40.0%
GATATGTAGGTAGGTTCTTC+TGG + chr4.4:1837330-1837349 MS.gene058555:intron 40.0%
GATATTGTTATGGGAGATCC+TGG + chr4.4:1838304-1838323 MS.gene058555:CDS 40.0%
GATTGATATGATGTCTGGAG+AGG + chr4.4:1836538-1836557 MS.gene058555:CDS 40.0%
GGATCTCCCATAACAATATC+TGG - chr4.4:1838304-1838323 None:intergenic 40.0%
GGCAACTCTGTTAAAGTAAG+TGG + chr4.4:1838358-1838377 MS.gene058555:intron 40.0%
GGGAGCTTAGATTTGTAAAC+AGG - chr4.4:1836767-1836786 None:intergenic 40.0%
GGGTAGTCTTTGTGATCAAA+GGG + chr4.4:1836082-1836101 MS.gene058555:CDS 40.0%
GGTTGACACTAACACTGAAT+TGG - chr4.4:1836124-1836143 None:intergenic 40.0%
GTAGCTAGAAGGATCATTTG+AGG - chr4.4:1839609-1839628 None:intergenic 40.0%
GTATCCCAAGTCTCTTCAAA+TGG - chr4.4:1839140-1839159 None:intergenic 40.0%
GTCTAGACACAAAGGTTTAG+AGG + chr4.4:1838120-1838139 MS.gene058555:CDS 40.0%
GTTTCCTGAGCAAATATGAC+CGG - chr4.4:1836500-1836519 None:intergenic 40.0%
GTTTCCTTGTGTGGGAAAAA+TGG + chr4.4:1839192-1839211 MS.gene058555:CDS 40.0%
TAATGAGAGCTAGAGCTACT+GGG + chr4.4:1836675-1836694 MS.gene058555:CDS 40.0%
TATGGCAACCAATACGAAGA+AGG + chr4.4:1837244-1837263 MS.gene058555:CDS 40.0%
TCAGAGAAGTCTAGACACAA+AGG + chr4.4:1838112-1838131 MS.gene058555:CDS 40.0%
TCATTCAAGCACATAGAGCT+TGG + chr4.4:1835955-1835974 MS.gene058555:CDS 40.0%
TCCAATAACTGAGGTGAAGA+AGG + chr4.4:1839026-1839045 MS.gene058555:CDS 40.0%
TGAATGGTGAATGTGGTGAA+AGG + chr4.4:1840429-1840448 MS.gene058555:CDS 40.0%
TGAGAACCCAACAACCTAAA+AGG - chr4.4:1836719-1836738 None:intergenic 40.0%
TGGGTAGTCTTTGTGATCAA+AGG + chr4.4:1836081-1836100 MS.gene058555:CDS 40.0%
TGGTTGCCATACATGATTAG+GGG - chr4.4:1837235-1837254 None:intergenic 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG + chr4.4:1839085-1839104 MS.gene058555:CDS 40.0%
TTCAAATGCCAGAAATGGAC+GGG + chr4.4:1839973-1839992 MS.gene058555:CDS 40.0%
TTGAAGCAACTCGTCGAATT+CGG + chr4.4:1840378-1840397 MS.gene058555:CDS 40.0%
TTGTTGGGTTCTCATCATCT+CGG + chr4.4:1836725-1836744 MS.gene058555:CDS 40.0%
TTTGTACAGGTATCACCAGA+AGG + chr4.4:1837424-1837443 MS.gene058555:intron 40.0%
! AAGCACCTTTTCATTTACCG+CGG + chr4.4:1838981-1839000 MS.gene058555:CDS 40.0%
! AATAAGGCTGTTTCCTTGTG+TGG + chr4.4:1839183-1839202 MS.gene058555:CDS 40.0%
! AATGCACGTAACTTGCATGT+TGG + chr4.4:1840160-1840179 MS.gene058555:intron 40.0%
! ACTTTTCCTTGACATGTCGT+TGG + chr4.4:1837622-1837641 MS.gene058555:intron 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG + chr4.4:1840514-1840533 MS.gene058555:CDS 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG + chr4.4:1836061-1836080 MS.gene058555:CDS 40.0%
! ATAAGGCTGTTTCCTTGTGT+GGG + chr4.4:1839184-1839203 MS.gene058555:CDS 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG - chr4.4:1839874-1839893 None:intergenic 40.0%
! ATGGATTACATCTGCTGTCA+TGG - chr4.4:1840483-1840502 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG - chr4.4:1838572-1838591 None:intergenic 40.0%
! CTTTTGCAGAATATACGGCT+AGG + chr4.4:1836330-1836349 MS.gene058555:CDS 40.0%
! GTAGTAAGTGCTGTCCAATT+TGG - chr4.4:1837455-1837474 None:intergenic 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG + chr4.4:1836062-1836081 MS.gene058555:CDS 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG - chr4.4:1838571-1838590 None:intergenic 40.0%
! TGCTGGTCATCAAGCAATTT+TGG + chr4.4:1837177-1837196 MS.gene058555:CDS 40.0%
! TGTTTGAAATGTGGGATGGA+TGG + chr4.4:1840518-1840537 MS.gene058555:CDS 40.0%
!! AAGGAAAAGTACCTGTGACT+TGG - chr4.4:1837612-1837631 None:intergenic 40.0%
!! ATCCGCAGGTTTTAGTGATA+CGG + chr4.4:1839662-1839681 MS.gene058555:CDS 40.0%
!! CAAGGAAACAGCCTTATTGA+TGG - chr4.4:1839181-1839200 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG + chr4.4:1839060-1839079 MS.gene058555:CDS 40.0%
!! TCTCATTTTTGCAATGCAGG+AGG + chr4.4:1836640-1836659 MS.gene058555:intron 40.0%
!! TTAAGCCCTCTAAAACTGGA+TGG - chr4.4:1839069-1839088 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG + chr4.4:1836710-1836729 MS.gene058555:CDS 40.0%
AAAAATGGTGCTTCCAGCAC+AGG + chr4.4:1839207-1839226 MS.gene058555:CDS 45.0%
AAAATGGTGCTTCCAGCACA+GGG + chr4.4:1839208-1839227 MS.gene058555:CDS 45.0%
AAACCTGGTCAATGGCAGAA+GGG - chr4.4:1836196-1836215 None:intergenic 45.0%
AACAGAAAGCCCGCAACAAA+TGG + chr4.4:1838559-1838578 MS.gene058555:CDS 45.0%
AATGGAAAGAGAGGCTTCAC+CGG + chr4.4:1836457-1836476 MS.gene058555:CDS 45.0%
ACAGCGAATGAGGAGATGAA+TGG + chr4.4:1840413-1840432 MS.gene058555:CDS 45.0%
AGGTTTCCCATCAACCACAA+CGG - chr4.4:1839094-1839113 None:intergenic 45.0%
AGTCTGAGCATAGTCACGTT+GGG - chr4.4:1837954-1837973 None:intergenic 45.0%
ATGACAATGGAGTAAACCGG+AGG + chr4.4:1839835-1839854 MS.gene058555:CDS 45.0%
ATTGGAGGCAGATATGTTGG+AGG + chr4.4:1837109-1837128 MS.gene058555:intron 45.0%
CAAACATACCCGTCCATTTC+TGG - chr4.4:1839984-1840003 None:intergenic 45.0%
CACAAGTGACTCCACATCAA+AGG - chr4.4:1837137-1837156 None:intergenic 45.0%
CACCGTATCACTAAAACCTG+CGG - chr4.4:1839667-1839686 None:intergenic 45.0%
CATTCTGTTTCCAGTCCAGT+TGG - chr4.4:1839569-1839588 None:intergenic 45.0%
CTTAAAGCCGTTGTGGTTGA+TGG + chr4.4:1839084-1839103 MS.gene058555:CDS 45.0%
CTTTGATGTGGAGTCACTTG+TGG + chr4.4:1837135-1837154 MS.gene058555:CDS 45.0%
GAAGTTGTGCATGCATCTAG+CGG + chr4.4:1838616-1838635 MS.gene058555:CDS 45.0%
GACCACCCATTAGTTCAACT+AGG - chr4.4:1838930-1838949 None:intergenic 45.0%
GAGAAGGATTCATGGGTTTG+TGG + chr4.4:1839519-1839538 MS.gene058555:CDS 45.0%
GAGAGAGAGAGAGAGAATCT+TGG - chr4.4:1837780-1837799 None:intergenic 45.0%
GAGCTATCTGCCTGAACAAA+AGG - chr4.4:1838856-1838875 None:intergenic 45.0%
GAGGAGATGAATGGTGAATG+TGG + chr4.4:1840422-1840441 MS.gene058555:CDS 45.0%
GCATCAAACTTGTGAGGGAA+TGG - chr4.4:1839939-1839958 None:intergenic 45.0%
GGATGATTTCCACGAAATGC+AGG + chr4.4:1837553-1837572 MS.gene058555:CDS 45.0%
TCAAGCACAAACCTGGTCAA+TGG - chr4.4:1836204-1836223 None:intergenic 45.0%
TCAGTTCGAAGCCTTCTGTT+CGG + chr4.4:1839792-1839811 MS.gene058555:CDS 45.0%
TCTGCTGTCATGGCCAATAT+AGG - chr4.4:1840473-1840492 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG + chr4.4:1840379-1840398 MS.gene058555:CDS 45.0%
TGAAGCTGGCAAATTAGAGC+TGG + chr4.4:1838036-1838055 MS.gene058555:CDS 45.0%
TGACAATGGAGTAAACCGGA+GGG + chr4.4:1839836-1839855 MS.gene058555:CDS 45.0%
TGCCTAGTTGAACTAATGGG+TGG + chr4.4:1838925-1838944 MS.gene058555:CDS 45.0%
TGCTGATGAACGCAACAACT+GGG + chr4.4:1838672-1838691 MS.gene058555:CDS 45.0%
TGGCAAATTAGAGCTGGAAG+CGG + chr4.4:1838042-1838061 MS.gene058555:CDS 45.0%
TGTGTCGAAGACACTGGAAT+TGG + chr4.4:1838796-1838815 MS.gene058555:CDS 45.0%
TGTTGGAGGATCCTTTGATG+TGG + chr4.4:1837123-1837142 MS.gene058555:CDS 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG + chr4.4:1839719-1839738 MS.gene058555:CDS 45.0%
! CAACTGGACTGGAAACAGAA+TGG + chr4.4:1839567-1839586 MS.gene058555:CDS 45.0%
! CGCCTTGAAAAACTTTGGAG+CGG + chr4.4:1839869-1839888 MS.gene058555:CDS 45.0%
! CTTCTGTTGTTGGGTTGTGA+GGG - chr4.4:1836787-1836806 None:intergenic 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG + chr4.4:1839720-1839739 MS.gene058555:CDS 45.0%
! GTAAGTGCTGTCCAATTTGG+CGG - chr4.4:1837452-1837471 None:intergenic 45.0%
! TACCTGTGACTTGGCAACAT+CGG - chr4.4:1837603-1837622 None:intergenic 45.0%
! TCTTCTGTTGTTGGGTTGTG+AGG - chr4.4:1836788-1836807 None:intergenic 45.0%
! TGCCAGCTTCAATTTTCGCT+CGG - chr4.4:1838027-1838046 None:intergenic 45.0%
! TGTTGCGGGCTTTCTGTTTT+CGG - chr4.4:1838557-1838576 None:intergenic 45.0%
!! AATTATGGTGGTACCGGCAT+TGG + chr4.4:1838886-1838905 MS.gene058555:CDS 45.0%
!! AGCACCATTTTTCCCACACA+AGG - chr4.4:1839199-1839218 None:intergenic 45.0%
!! CTCGTATTGGCCTTCACAAT+AGG - chr4.4:1838167-1838186 None:intergenic 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG - chr4.4:1839728-1839747 None:intergenic 45.0%
!! CTGTTCTGACTAGCCCTTTT+AGG + chr4.4:1836702-1836721 MS.gene058555:CDS 45.0%
!! GGCTTTAAGCCCTCTAAAAC+TGG - chr4.4:1839073-1839092 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG - chr4.4:1835905-1835924 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG + chr4.4:1839726-1839745 MS.gene058555:CDS 45.0%
!!! CTTTTAGCTCCTGCATTTCG+TGG - chr4.4:1837565-1837584 None:intergenic 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG + chr4.4:1836709-1836728 MS.gene058555:CDS 45.0%
AAACCCTTCTGCCATTGACC+AGG + chr4.4:1836190-1836209 MS.gene058555:CDS 50.0%
AAACTTTATAAGCCGGCCGC+AGG + chr4.4:1838954-1838973 MS.gene058555:CDS 50.0%
AACAGGCAAGAAGAGACAGC+TGG + chr4.4:1839743-1839762 MS.gene058555:CDS 50.0%
AACTCGTCGAATTCGGGAGA+TGG + chr4.4:1840385-1840404 MS.gene058555:CDS 50.0%
AAGAGCAGCTTTGCCGCTAT+CGG - chr4.4:1839907-1839926 None:intergenic 50.0%
AAGTAGCGGCCTTTCGAAAG+CGG - chr4.4:1836357-1836376 None:intergenic 50.0%
ACAGGCAAGAAGAGACAGCT+GGG + chr4.4:1839744-1839763 MS.gene058555:CDS 50.0%
AGCTCATTAAAGCGACCGCA+GGG + chr4.4:1836807-1836826 MS.gene058555:CDS 50.0%
ATACTGCAGTTCACTGAGCG+AGG + chr4.4:1838505-1838524 MS.gene058555:intron 50.0%
ATCCTATCTTGGGCCGAGAA+AGG - chr4.4:1838826-1838845 None:intergenic 50.0%
ATGGTCTGTGTCGAAGACAC+TGG + chr4.4:1838790-1838809 MS.gene058555:CDS 50.0%
CAAACCTGGTCAATGGCAGA+AGG - chr4.4:1836197-1836216 None:intergenic 50.0%
CAAGTGCCAACGACATGTCA+AGG - chr4.4:1837631-1837650 None:intergenic 50.0%
CAGTCTGAGCATAGTCACGT+TGG - chr4.4:1837955-1837974 None:intergenic 50.0%
CCACTGAGAGCTAGTATGGT+GGG + chr4.4:1839696-1839715 MS.gene058555:CDS 50.0%
CGAACACTGCCAGCTAAGAA+AGG - chr4.4:1838267-1838286 None:intergenic 50.0%
CTGCTGATGAACGCAACAAC+TGG + chr4.4:1838671-1838690 MS.gene058555:CDS 50.0%
CTGGGAAAAGAGACGCCTAA+TGG + chr4.4:1839762-1839781 MS.gene058555:CDS 50.0%
CTTGACATGTCGTTGGCACT+TGG + chr4.4:1837629-1837648 MS.gene058555:intron 50.0%
GAAGCCACTGAGAGCTAGTA+TGG + chr4.4:1839692-1839711 MS.gene058555:CDS 50.0%
GACCGAGCGAAAATTGAAGC+TGG + chr4.4:1838022-1838041 MS.gene058555:CDS 50.0%
GACTGCTCAAGCATGTGGTA+AGG + chr4.4:1837970-1837989 MS.gene058555:CDS 50.0%
GAGCAGTTTGAGAAGCAGCA+TGG + chr4.4:1836419-1836438 MS.gene058555:CDS 50.0%
GCAGGCGCCTTGAAAAACTT+TGG + chr4.4:1839864-1839883 MS.gene058555:CDS 50.0%
GGAGCTAAAAGTTCGAGCAG+AGG + chr4.4:1837574-1837593 MS.gene058555:CDS 50.0%
GGATTCATGGGTTTGTGGAG+AGG + chr4.4:1839524-1839543 MS.gene058555:CDS 50.0%
GGTGCATACTCATCCCTAAC+CGG - chr4.4:1836479-1836498 None:intergenic 50.0%
GGTTAGGGATGAGTATGCAC+CGG + chr4.4:1836478-1836497 MS.gene058555:CDS 50.0%
GTCTTCGACACAGACCATCA+AGG - chr4.4:1838788-1838807 None:intergenic 50.0%
GTTTGAGAAGCAGCATGGAG+TGG + chr4.4:1836424-1836443 MS.gene058555:CDS 50.0%
TAGAGGGCTTAAAGCCGTTG+TGG + chr4.4:1839077-1839096 MS.gene058555:CDS 50.0%
TAGGCCACTCCACTAAGTAG+CGG - chr4.4:1836371-1836390 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG + chr4.4:1839528-1839547 MS.gene058555:CDS 50.0%
TTCCTTTCTCGGCCCAAGAT+AGG + chr4.4:1838821-1838840 MS.gene058555:CDS 50.0%
TTCGAAAGGCCGCTACTTAG+TGG + chr4.4:1836359-1836378 MS.gene058555:CDS 50.0%
! AAAGAGAGGCTTCACCGGTT+AGG + chr4.4:1836462-1836481 MS.gene058555:CDS 50.0%
! AAGAGAGGCTTCACCGGTTA+GGG + chr4.4:1836463-1836482 MS.gene058555:CDS 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG - chr4.4:1839114-1839133 None:intergenic 50.0%
! GATGTGAAGTGTGCCGATAG+CGG + chr4.4:1839891-1839910 MS.gene058555:CDS 50.0%
! GGATGGCAAGAGCATGAACA+TGG - chr4.4:1836145-1836164 None:intergenic 50.0%
! TGCACCGGTCATATTTGCTC+AGG + chr4.4:1836493-1836512 MS.gene058555:CDS 50.0%
!! GAAAAGGTGCTTCCAACCTG+CGG - chr4.4:1838973-1838992 None:intergenic 50.0%
AAGGCCGCTACTTAGTGGAG+TGG + chr4.4:1836364-1836383 MS.gene058555:CDS 55.0%
AGCCGATGTTGCCAAGTCAC+AGG + chr4.4:1837598-1837617 MS.gene058555:CDS 55.0%
CAATGGAGTAAACCGGAGGG+TGG + chr4.4:1839839-1839858 MS.gene058555:CDS 55.0%
CATGGGTTTGTGGAGAGGAC+GGG + chr4.4:1839529-1839548 MS.gene058555:CDS 55.0%
GAGCTCATTAAAGCGACCGC+AGG + chr4.4:1836806-1836825 MS.gene058555:CDS 55.0%
GATCTTCAGTGTGCGCCAAC+TGG + chr4.4:1839551-1839570 MS.gene058555:CDS 55.0%
GATGGAGAGGACAGCGAATG+AGG + chr4.4:1840403-1840422 MS.gene058555:CDS 55.0%
GCAGAATCAGCACCACCCTT+TGG + chr4.4:1835890-1835909 MS.gene058555:CDS 55.0%
GCCACTGAGAGCTAGTATGG+TGG + chr4.4:1839695-1839714 MS.gene058555:CDS 55.0%
GCTCAGACTGCTCAAGCATG+TGG + chr4.4:1837965-1837984 MS.gene058555:CDS 55.0%
GCTTGGTCTGCTTCTACGCA+CGG + chr4.4:1837916-1837935 MS.gene058555:CDS 55.0%
GGGTTCTCATCATCTCGGTG+TGG + chr4.4:1836730-1836749 MS.gene058555:CDS 55.0%
GTCGAATTCGGGAGATGGAG+AGG + chr4.4:1840390-1840409 MS.gene058555:CDS 55.0%
TCCAATTTGGCGGTGCCTTC+TGG - chr4.4:1837442-1837461 None:intergenic 55.0%
TTTATAAGCCGGCCGCAGGT+TGG + chr4.4:1838958-1838977 MS.gene058555:CDS 55.0%
! CCCACCATACTAGCTCTCAG+TGG - chr4.4:1839699-1839718 None:intergenic 55.0%
!! ACCAGAAGGCACCGCCAAAT+TGG + chr4.4:1837438-1837457 MS.gene058555:CDS 55.0%
CGGCTAGGACCGCTTTCGAA+AGG + chr4.4:1836345-1836364 MS.gene058555:CDS 60.0%
TCAGTGTGCGCCAACTGGAC+TGG + chr4.4:1839556-1839575 MS.gene058555:CDS 60.0%
AGGTGCTTCCAACCTGCGGC+CGG - chr4.4:1838969-1838988 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 1835864 1840628 1835864 ID=MS.gene058555
chr4.4 mRNA 1835864 1840628 1835864 ID=MS.gene058555.t1;Parent=MS.gene058555
chr4.4 exon 1835864 1836211 1835864 ID=MS.gene058555.t1.exon1;Parent=MS.gene058555.t1
chr4.4 CDS 1835864 1836211 1835864 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1836326 1836559 1836326 ID=MS.gene058555.t1.exon2;Parent=MS.gene058555.t1
chr4.4 CDS 1836326 1836559 1836326 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1836659 1836828 1836659 ID=MS.gene058555.t1.exon3;Parent=MS.gene058555.t1
chr4.4 CDS 1836659 1836828 1836659 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1837120 1837338 1837120 ID=MS.gene058555.t1.exon4;Parent=MS.gene058555.t1
chr4.4 CDS 1837120 1837338 1837120 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1837433 1837619 1837433 ID=MS.gene058555.t1.exon5;Parent=MS.gene058555.t1
chr4.4 CDS 1837433 1837619 1837433 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1837719 1837770 1837719 ID=MS.gene058555.t1.exon6;Parent=MS.gene058555.t1
chr4.4 CDS 1837719 1837770 1837719 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1837912 1838141 1837912 ID=MS.gene058555.t1.exon7;Parent=MS.gene058555.t1
chr4.4 CDS 1837912 1838141 1837912 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1838274 1838372 1838274 ID=MS.gene058555.t1.exon8;Parent=MS.gene058555.t1
chr4.4 CDS 1838274 1838372 1838274 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1838514 1839229 1838514 ID=MS.gene058555.t1.exon9;Parent=MS.gene058555.t1
chr4.4 CDS 1838514 1839229 1838514 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1839491 1839994 1839491 ID=MS.gene058555.t1.exon10;Parent=MS.gene058555.t1
chr4.4 CDS 1839491 1839994 1839491 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
chr4.4 exon 1840376 1840628 1840376 ID=MS.gene058555.t1.exon11;Parent=MS.gene058555.t1
chr4.4 CDS 1840376 1840628 1840376 ID=cds.MS.gene058555.t1;Parent=MS.gene058555.t1
Gene Sequence

>MS.gene058555

ATGGGTCTTCTCTTGAAGATGAAGATGCAGAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAACAAACGGGGAACAAACGATACACATTCATTCAAGCACATAGAGCTTGGCTTCTCAAATTAATGTTTCTATGGATTCTTCTGATGGCTCTGATTAGTCGTATCATCTACAGCAAAATGGATGTGGGTACTAAAGTGAGAAGGAAAGAGGTTTTGGGTAGTCTTTGTGATCAAAGGGCTAGAATGTTGCAAGACCAATTCAGTGTTAGTGTCAACCATGTTCATGCTCTTGCCATCCTTGTTTCAACTTTCCATTATTACAGAAACCCTTCTGCCATTGACCAGGTTTGTGCTTGAAAGTTTTGATCATTCTGTGTTGGAAATGAAAAATACTCAATCTTTGTTGTGTTTTTGAACCTTTATGTATCCTCTGATGATTATTTGATGATTTCCCTTCAGGAAACTTTTGCAGAATATACGGCTAGGACCGCTTTCGAAAGGCCGCTACTTAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCAGAAAGAGAGCAGTTTGAGAAGCAGCATGGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACCGGTTAGGGATGAGTATGCACCGGTCATATTTGCTCAGGAAACTCTCTCTTACCTTGAGTCGATTGATATGATGTCTGGAGAGGTAAAGAACGACACTTGCGAACCATTCCACCGCTTGTTTTTTTTTTTTTTTTGTGGAGGATTACTTTTATTACTACAATTTCTCATTTTTGCAATGCAGGAGGATCGAGAGAACATAATGAGAGCTAGAGCTACTGGGAAAGCTGTTCTGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATCTAAGCTCCCTCACAACCCAACAACAGAAGAGCTCATTAAAGCGACCGCAGGGTATATCCTTATTTCACTAATTGTCAACTTTTTGTTTTTAGAATCTTTTTTCTTATGTTTCATATGAGTAATTAGAGGATGAAGGTTGTGTTTACTATAAAAATCTTAGGTACATTATTAGCATTTTATTAAGCAGCAGTTAATCCGTCAATGCCACTATTAGTGTTATCGACACAGCTTCTATCATTGAGTTGAAGAAAACTGTTTCTGTTACAAGGCTTGTATTTGGTTATATTTTGTTGTAAGCATTTCAATAGAACATGTGATTAATGACTTTTTAATTGGAGGCAGATATGTTGGAGGATCCTTTGATGTGGAGTCACTTGTGGAAAATTTACTTGGTCAACTTGCTGGTCATCAAGCAATTTTGGTCAATGTATATGATGTCACGAACTCTACTGATCCCCTAATCATGTATGGCAACCAATACGAAGAAGGTGATGTTTCTCTTGTCCATGAAAGTAAGCTTGATTTTGGAGATCCATACAGGAAACATCAAATGATATGTAGGTAGGTTCTTCTGGCTACTGTACATTACATTTTCTGGAACTGACTTTCAGCATTTTGTCAGCAGAAAGATGCTTATGATCAAACTTTTGTACAGGTATCACCAGAAGGCACCGCCAAATTGGACAGCACTTACTACTGCAATCCTATTCTTTGTGATTCTTCTATTAATCGGTTACATTTTATATGGTGCTGGGAATCATATTGTCAAAGTAGAGGATGATTTCCACGAAATGCAGGAGCTAAAAGTTCGAGCAGAGGCAGCCGATGTTGCCAAGTCACAGGTACTTTTCCTTGACATGTCGTTGGCACTTGGCATATTTCGATATTTCCTTTGATTACGCAACAATAACTAATACTGAAATTTTTGTTTTTTATGTCAGTTTCTAGCTACCGTCTCTCATGAAATTAGAACACCTATGAATGGCATTTTAGGTAACTCCAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCTAAAATGTAACATATGCTTTCATACCTTTCACTTTCTCATTAATAATGTTATCACAAAACAAAACTCTGTATGATTGTAGGAATGCTTGGTCTGCTTCTACGCACGGAATTGAACTCAACCCAACGTGACTATGCTCAGACTGCTCAAGCATGTGGTAAGGCTCTGATAGCATTAATAAATGAAGTGCTTGACCGAGCGAAAATTGAAGCTGGCAAATTAGAGCTGGAAGCGGTTCCATTTGACCTTCGTTCCATACTTGATGATGTCCTCTCTCTTTTTTCAGAGAAGTCTAGACACAAAGGTTTAGAGGTATGCTCAAATCGTTGCTAAACCTATTGTGAAGGCCAATACGAGTTTCATAATAATATCTTAATTTGGTTTCCTCTCTTTATTTGATGATCTAACTTCATTATCCTTTTTTTTTCATTTTACCTTTCTTAGCTGGCAGTGTTCGTTTCTGATAAAGTTCCAGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATTGTAACAAATCTTGTTGGCAACTCTGTTAAAGTAAGTGGAATTTTCAAATTTTATTTGCCTAAAGTTATTTGCATTACTAATATGCATGTTATGTTGGAAATGTTTGAAATTTTGCTGTGTATAGCAAGATACTTGTTGCTTACATTTCTGATTAACTTCAATATACTGCAGTTCACTGAGCGAGGCCATATATTTGTTAAAGTTCATTTATCCGAAAACAGAAAGCCCGCAACAAATGGAAAGCTTGAGACTTATCGAAATGGAGGGTCTGAAGAAGTTGTGCATGCATCTAGCGGTTATAATCTCAAAACGCTAAGTGGATATGAAGCTGCTGATGAACGCAACAACTGGGATAATTTTAACCACCTAATTGCTGATGAAGAGTTTTTCTGCGATGCTTCAACTAAAAAAGTGGCCTCGAATGAATTTTATGAACAAGTCACCTTGATGGTCTGTGTCGAAGACACTGGAATTGGAATTCCTTTCTCGGCCCAAGATAGGATTTTCATGCCTTTTGTTCAGGCAGATAGCTCGACTTCTAGAAATTATGGTGGTACCGGCATTGGTTTGAGTATCAGTAAGTGCCTAGTTGAACTAATGGGTGGTCAAATAAACTTTATAAGCCGGCCGCAGGTTGGAAGCACCTTTTCATTTACCGCGGATTTTGGAATATTTAAGAAGAATCCAATAACTGAGGTGAAGAAGGTTAACTATGAAGATCTACCATCCAGTTTTAGAGGGCTTAAAGCCGTTGTGGTTGATGGGAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTTGGGATACAAGCTAAAGTCGCAAATGCCATCAATAAGGCTGTTTCCTTGTGTGGGAAAAATGGTGCTTCCAGCACAGGGTAAGTTTTAAATTTTCCTTTTTGTAATTAATGCATTGCTATTTTTAGTGAACTAATGTTAGGACTATGTGTGTTTAATCATAATTCCATCTAAAGTCACACATGAATCATGATAGGCTGTGACTTGCTGACAGTGTAAAACGTATAAAACATTATACACTAACAATGTATCAAAATTAAACTCTTTGAAGAATTGCATTTGTTGTTGTGTGGTTCAATACTTGAGTTCATTAACTGAGTTAAAATATTTGGTTGTGGCAGGTTATTCCAGCCTGATATTATTTTTGTTGAGAAGGATTCATGGGTTTGTGGAGAGGACGGGATCTTCAGTGTGCGCCAACTGGACTGGAAACAGAATGGACATATATTTAAGATGCCTCAAATGATCCTTCTAGCTACGAATATTAGTAATGACGAATTTGATAAAGCTAAATCCGCAGGTTTTAGTGATACGGTGATCATGAAGCCACTGAGAGCTAGTATGGTGGGAGCTTGCCTTCAGCAAGTTTTGGGAACAGGCAAGAAGAGACAGCTGGGAAAAGAGACGCCTAATGGTTCAACTTCAGTTCGAAGCCTTCTGTTCGGAAAGAAAATTTTAGTGGTTGATGACAATGGAGTAAACCGGAGGGTGGCTGCAGGCGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCCGATAGCGGCAAAGCTGCTCTTGAAATGCTTCCATTCCCTCACAAGTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTATGTTTGTTCGCATCGATTATTAAATTTTTTTTTGGTATTATTTGAACATAACATGTTAATATGATAGTTGCATTGCTGATAAAAAGAACTACTTGCACAAGTTGAATGCAAGTTACGTGATAGTTGCCTTGCTGATAAATTCAATGTTATGCACGTAAGTTGAATGCACGTAACTTGCATGTTGGCTATACTAATTCACATTCAAATTATTTTGTTTGTATATAAACTCTATTTACACATGTTATTTATGTTCTAATTCACATCCATACTATATTTGTTTGTATATAAACCATATCTATACATGTTATGTGTGTTCTAATTCACATGAATATTATTTTTACACGTTTTTTATAAATCATGTACTAACATTATTTTCAGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACAGCGAATGAGGAGATGAATGGTGAATGTGGTGAAAGGAAAAGTGAATTCCATTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGAGAATCTTTATCAAGCAGTTGCAAAGTTTTTCCAGACAAAACCTATTTCAGTAGATTCATGA
Protein sequence

>MS.gene058555.t1

MGLLLKMKMQNQHHPLASKLQEQTGNKRYTFIQAHRAWLLKLMFLWILLMALISRIIYSKMDVGTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVNSEREQFEKQHGVVIKTMEREASPVRDEYAPVIFAQETLSYLESIDMMSGEEDRENIMRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPHNPTTEELIKATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDVTNSTDPLIMYGNQYEEGDVSLVHESKLDFGDPYRKHQMICRYHQKAPPNWTALTTAILFFVILLLIGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPATNGKLETYRNGGSEEVVHASSGYNLKTLSGYEAADERNNWDNFNHLIADEEFFCDASTKKVASNEFYEQVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTADFGIFKKNPITEVKKVNYEDLPSSFRGLKAVVVDGKPVRAAVTRYHLKRLGIQAKVANAINKAVSLCGKNGASSTGLFQPDIIFVEKDSWVCGEDGIFSVRQLDWKQNGHIFKMPQMILLATNISNDEFDKAKSAGFSDTVIMKPLRASMVGACLQQVLGTGKKRQLGKETPNGSTSVRSLLFGKKILVVDDNGVNRRVAAGALKNFGADVKCADSGKAALEMLPFPHKFDACFMDIQMPEMDGFEATRRIREMERTANEEMNGECGERKSEFHLPILAMTADVIHATYEECLKCGMDGYVSKPFEEENLYQAVAKFFQTKPISVDS