Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059586.t1 | XP_003620567.1 | 97.5 | 510 | 13 | 0 | 1 | 510 | 1 | 510 | 8.20E-281 | 975.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059586.t1 | Q8GW61 | 71.5 | 501 | 143 | 0 | 1 | 501 | 1 | 501 | 2.1e-208 | 726.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059586.t1 | G7KNY9 | 97.5 | 510 | 13 | 0 | 1 | 510 | 1 | 510 | 5.9e-281 | 975.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene024888 | MS.gene059586 | PPI |
MS.gene31419 | MS.gene059586 | PPI |
MS.gene000139 | MS.gene059586 | PPI |
MS.gene064542 | MS.gene059586 | PPI |
MS.gene031671 | MS.gene059586 | PPI |
MS.gene059586 | MS.gene006634 | PPI |
MS.gene055771 | MS.gene059586 | PPI |
MS.gene92308 | MS.gene059586 | PPI |
MS.gene73119 | MS.gene059586 | PPI |
MS.gene035805 | MS.gene059586 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059586.t1 | MTR_6g087040 | 97.451 | 510 | 13 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1016 |
MS.gene059586.t1 | MTR_6g088375 | 97.451 | 510 | 13 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1016 |
MS.gene059586.t1 | MTR_8g102860 | 76.660 | 497 | 113 | 1 | 13 | 506 | 13 | 509 | 0.0 | 791 |
MS.gene059586.t1 | MTR_8g102860 | 76.368 | 457 | 105 | 1 | 53 | 506 | 1 | 457 | 0.0 | 720 |
MS.gene059586.t1 | MTR_0204s0020 | 58.215 | 493 | 202 | 3 | 8 | 499 | 3 | 492 | 0.0 | 613 |
MS.gene059586.t1 | MTR_0204s0020 | 57.809 | 493 | 201 | 4 | 8 | 499 | 3 | 489 | 0.0 | 602 |
MS.gene059586.t1 | MTR_7g091690 | 58.683 | 501 | 202 | 4 | 1 | 499 | 1 | 498 | 0.0 | 599 |
MS.gene059586.t1 | MTR_5g094760 | 57.312 | 506 | 211 | 4 | 1 | 504 | 1 | 503 | 0.0 | 596 |
MS.gene059586.t1 | MTR_0204s0040 | 55.624 | 489 | 215 | 2 | 14 | 502 | 17 | 503 | 0.0 | 588 |
MS.gene059586.t1 | MTR_4g116770 | 55.624 | 489 | 215 | 2 | 14 | 502 | 213 | 699 | 0.0 | 587 |
MS.gene059586.t1 | MTR_4g116790 | 55.200 | 500 | 220 | 3 | 3 | 502 | 6 | 501 | 0.0 | 576 |
MS.gene059586.t1 | MTR_5g006070 | 57.114 | 492 | 204 | 6 | 18 | 504 | 14 | 503 | 0.0 | 563 |
MS.gene059586.t1 | MTR_3g008160 | 53.347 | 493 | 227 | 3 | 18 | 508 | 15 | 506 | 0.0 | 530 |
MS.gene059586.t1 | MTR_1g038630 | 52.756 | 508 | 232 | 5 | 1 | 505 | 1 | 503 | 0.0 | 523 |
MS.gene059586.t1 | MTR_5g006070 | 56.455 | 457 | 192 | 6 | 53 | 504 | 1 | 455 | 0.0 | 517 |
MS.gene059586.t1 | MTR_1g104750 | 50.600 | 500 | 240 | 5 | 1 | 497 | 1 | 496 | 1.50e-177 | 508 |
MS.gene059586.t1 | MTR_1g104780 | 53.360 | 506 | 227 | 6 | 1 | 502 | 1 | 501 | 1.77e-177 | 509 |
MS.gene059586.t1 | MTR_5g082540 | 52.361 | 487 | 227 | 4 | 18 | 501 | 15 | 499 | 4.00e-176 | 505 |
MS.gene059586.t1 | MTR_0009s0370 | 52.236 | 492 | 229 | 4 | 18 | 504 | 13 | 503 | 1.56e-175 | 504 |
MS.gene059586.t1 | MTR_1g104770 | 50.299 | 501 | 241 | 6 | 1 | 497 | 1 | 497 | 1.33e-174 | 501 |
MS.gene059586.t1 | MTR_3g093010 | 52.437 | 513 | 231 | 7 | 1 | 505 | 1 | 508 | 4.11e-174 | 500 |
MS.gene059586.t1 | MTR_5g041550 | 51.845 | 515 | 237 | 6 | 1 | 509 | 1 | 510 | 1.04e-173 | 499 |
MS.gene059586.t1 | MTR_3g023480 | 51.509 | 497 | 231 | 5 | 15 | 504 | 10 | 503 | 4.31e-173 | 498 |
MS.gene059586.t1 | MTR_4g091370 | 53.024 | 496 | 228 | 3 | 18 | 509 | 15 | 509 | 2.26e-171 | 493 |
MS.gene059586.t1 | MTR_3g008160 | 53.057 | 458 | 212 | 3 | 53 | 508 | 1 | 457 | 7.67e-170 | 488 |
MS.gene059586.t1 | MTR_3g008170 | 50.101 | 493 | 238 | 5 | 21 | 506 | 18 | 509 | 9.59e-170 | 489 |
MS.gene059586.t1 | MTR_1g038600 | 49.704 | 507 | 231 | 6 | 1 | 505 | 1 | 485 | 1.60e-166 | 480 |
MS.gene059586.t1 | MTR_3g007910 | 48.444 | 514 | 225 | 7 | 1 | 510 | 1 | 478 | 3.31e-160 | 464 |
MS.gene059586.t1 | MTR_4g090600 | 52.941 | 493 | 227 | 4 | 18 | 506 | 15 | 506 | 6.93e-160 | 464 |
MS.gene059586.t1 | MTR_3g074390 | 46.955 | 509 | 261 | 8 | 1 | 503 | 1 | 506 | 2.01e-159 | 463 |
MS.gene059586.t1 | MTR_3g074410 | 45.562 | 507 | 268 | 8 | 1 | 503 | 1 | 503 | 3.31e-158 | 460 |
MS.gene059586.t1 | MTR_3g074270 | 47.012 | 502 | 239 | 7 | 1 | 500 | 1 | 477 | 2.60e-156 | 454 |
MS.gene059586.t1 | MTR_4g116790 | 55.220 | 364 | 159 | 3 | 3 | 366 | 6 | 365 | 8.49e-150 | 434 |
MS.gene059586.t1 | MTR_3g093060 | 49.666 | 449 | 219 | 4 | 53 | 495 | 1 | 448 | 6.88e-146 | 426 |
MS.gene059586.t1 | MTR_3g074380 | 46.612 | 369 | 192 | 5 | 1 | 367 | 1 | 366 | 2.88e-110 | 332 |
MS.gene059586.t1 | MTR_3g074370 | 42.405 | 316 | 176 | 6 | 191 | 502 | 20 | 333 | 9.80e-88 | 273 |
MS.gene059586.t1 | MTR_3g074340 | 42.089 | 316 | 177 | 6 | 191 | 502 | 20 | 333 | 1.27e-87 | 273 |
MS.gene059586.t1 | MTR_3g074320 | 42.089 | 316 | 177 | 6 | 191 | 502 | 20 | 333 | 2.69e-87 | 272 |
MS.gene059586.t1 | MTR_3g074400 | 36.044 | 455 | 232 | 11 | 53 | 483 | 1 | 420 | 1.09e-76 | 247 |
MS.gene059586.t1 | MTR_6g088450 | 26.931 | 479 | 308 | 12 | 13 | 478 | 50 | 499 | 2.28e-53 | 188 |
MS.gene059586.t1 | MTR_8g103500 | 26.295 | 502 | 336 | 11 | 21 | 510 | 13 | 492 | 1.43e-52 | 186 |
MS.gene059586.t1 | MTR_4g072030 | 28.106 | 491 | 303 | 13 | 28 | 493 | 26 | 491 | 4.81e-50 | 179 |
MS.gene059586.t1 | MTR_7g005910 | 30.000 | 480 | 305 | 12 | 25 | 497 | 32 | 487 | 4.98e-49 | 176 |
MS.gene059586.t1 | MTR_7g446340 | 27.406 | 478 | 311 | 12 | 25 | 492 | 54 | 505 | 6.07e-48 | 174 |
MS.gene059586.t1 | MTR_6g007340 | 27.406 | 478 | 311 | 12 | 25 | 492 | 54 | 505 | 6.07e-48 | 174 |
MS.gene059586.t1 | MTR_1g116660 | 29.303 | 488 | 314 | 14 | 25 | 504 | 34 | 498 | 7.87e-48 | 173 |
MS.gene059586.t1 | MTR_1g116650 | 30.913 | 482 | 286 | 12 | 25 | 497 | 77 | 520 | 1.99e-47 | 172 |
MS.gene059586.t1 | MTR_3g084110 | 28.515 | 505 | 320 | 14 | 16 | 508 | 13 | 488 | 2.36e-47 | 171 |
MS.gene059586.t1 | MTR_6g018790 | 29.512 | 471 | 298 | 11 | 19 | 485 | 98 | 538 | 3.55e-47 | 172 |
MS.gene059586.t1 | MTR_5g096000 | 48.663 | 187 | 73 | 2 | 1 | 187 | 1 | 164 | 5.93e-47 | 166 |
MS.gene059586.t1 | MTR_5g096000 | 49.254 | 134 | 68 | 0 | 377 | 510 | 176 | 309 | 2.03e-32 | 126 |
MS.gene059586.t1 | MTR_4g077740 | 29.237 | 472 | 286 | 11 | 34 | 485 | 53 | 496 | 9.45e-47 | 170 |
MS.gene059586.t1 | MTR_4g069500 | 24.748 | 497 | 333 | 9 | 28 | 504 | 31 | 506 | 1.59e-46 | 170 |
MS.gene059586.t1 | MTR_2g013310 | 25.934 | 482 | 323 | 10 | 19 | 491 | 46 | 502 | 1.65e-46 | 170 |
MS.gene059586.t1 | MTR_3g116240 | 27.329 | 483 | 302 | 11 | 28 | 485 | 29 | 487 | 2.52e-46 | 169 |
MS.gene059586.t1 | MTR_5g075300 | 27.902 | 491 | 310 | 10 | 21 | 489 | 14 | 482 | 5.93e-46 | 168 |
MS.gene059586.t1 | MTR_4g069500 | 26.392 | 413 | 284 | 6 | 111 | 504 | 45 | 456 | 9.61e-46 | 167 |
MS.gene059586.t1 | MTR_8g077890 | 28.671 | 429 | 282 | 7 | 92 | 498 | 65 | 491 | 4.84e-45 | 165 |
MS.gene059586.t1 | MTR_7g082270 | 27.692 | 455 | 301 | 8 | 32 | 485 | 71 | 498 | 7.49e-45 | 165 |
MS.gene059586.t1 | MTR_2g013310 | 28.462 | 390 | 265 | 8 | 111 | 491 | 45 | 429 | 8.23e-45 | 164 |
MS.gene059586.t1 | MTR_6g087910 | 29.288 | 379 | 251 | 6 | 111 | 485 | 117 | 482 | 2.27e-41 | 155 |
MS.gene059586.t1 | MTR_4g013205 | 29.024 | 379 | 252 | 7 | 111 | 485 | 103 | 468 | 2.65e-41 | 154 |
MS.gene059586.t1 | MTR_7g082270 | 28.715 | 397 | 256 | 7 | 32 | 428 | 71 | 440 | 3.68e-41 | 154 |
MS.gene059586.t1 | MTR_5g077580 | 26.087 | 552 | 281 | 16 | 35 | 492 | 35 | 553 | 5.64e-40 | 152 |
MS.gene059586.t1 | MTR_1g022315 | 27.561 | 410 | 283 | 7 | 86 | 490 | 89 | 489 | 8.35e-40 | 150 |
MS.gene059586.t1 | MTR_1g022315 | 27.318 | 399 | 276 | 7 | 97 | 490 | 1 | 390 | 2.81e-39 | 147 |
MS.gene059586.t1 | MTR_8g077310 | 26.609 | 466 | 305 | 10 | 26 | 485 | 47 | 481 | 7.10e-39 | 148 |
MS.gene059586.t1 | MTR_2g026160 | 31.977 | 344 | 199 | 9 | 25 | 355 | 26 | 347 | 7.36e-39 | 149 |
MS.gene059586.t1 | MTR_3g074330 | 49.383 | 162 | 71 | 3 | 1 | 155 | 1 | 158 | 1.01e-38 | 139 |
MS.gene059586.t1 | MTR_3g074360 | 49.383 | 162 | 71 | 3 | 1 | 155 | 1 | 158 | 1.01e-38 | 139 |
MS.gene059586.t1 | MTR_3g080240 | 28.535 | 396 | 266 | 10 | 95 | 485 | 144 | 527 | 1.87e-38 | 147 |
MS.gene059586.t1 | MTR_8g077310 | 27.342 | 395 | 270 | 8 | 97 | 485 | 1 | 384 | 3.10e-38 | 144 |
MS.gene059586.t1 | MTR_5g020270 | 27.737 | 411 | 280 | 8 | 86 | 490 | 90 | 489 | 3.62e-38 | 146 |
MS.gene059586.t1 | MTR_3g074310 | 48.765 | 162 | 72 | 3 | 1 | 155 | 1 | 158 | 4.55e-38 | 137 |
MS.gene059586.t1 | MTR_5g020270 | 27.500 | 400 | 273 | 8 | 97 | 490 | 1 | 389 | 1.86e-37 | 142 |
MS.gene059586.t1 | MTR_2g048720 | 30.769 | 338 | 205 | 7 | 35 | 365 | 35 | 350 | 3.09e-37 | 145 |
MS.gene059586.t1 | MTR_7g113960 | 29.829 | 409 | 257 | 12 | 86 | 485 | 67 | 454 | 4.43e-37 | 143 |
MS.gene059586.t1 | MTR_8g077300 | 26.652 | 469 | 303 | 11 | 25 | 485 | 38 | 473 | 4.99e-37 | 142 |
MS.gene059586.t1 | MTR_2g049020 | 28.696 | 345 | 218 | 7 | 35 | 371 | 35 | 359 | 4.04e-36 | 142 |
MS.gene059586.t1 | MTR_1g038620 | 42.767 | 159 | 73 | 2 | 206 | 364 | 50 | 190 | 9.58e-36 | 132 |
MS.gene059586.t1 | MTR_7g113970 | 29.710 | 414 | 253 | 12 | 86 | 485 | 102 | 491 | 2.24e-35 | 138 |
MS.gene059586.t1 | MTR_5g019870 | 27.373 | 453 | 291 | 9 | 81 | 509 | 50 | 488 | 4.27e-35 | 137 |
MS.gene059586.t1 | MTR_7g094450 | 26.355 | 406 | 277 | 6 | 86 | 485 | 80 | 469 | 4.39e-35 | 137 |
MS.gene059586.t1 | MTR_4g118610 | 29.412 | 408 | 263 | 10 | 86 | 485 | 92 | 482 | 2.78e-33 | 132 |
MS.gene059586.t1 | MTR_5g020270 | 26.923 | 416 | 256 | 9 | 86 | 490 | 90 | 468 | 5.98e-33 | 131 |
MS.gene059586.t1 | MTR_0064s0040 | 43.478 | 138 | 66 | 1 | 18 | 155 | 16 | 141 | 5.07e-31 | 117 |
MS.gene059586.t1 | MTR_7g094110 | 26.353 | 425 | 283 | 10 | 67 | 485 | 71 | 471 | 6.26e-31 | 125 |
MS.gene059586.t1 | MTR_4g064820 | 28.455 | 369 | 225 | 9 | 26 | 376 | 96 | 443 | 1.82e-29 | 121 |
MS.gene059586.t1 | MTR_2g020710 | 27.094 | 406 | 273 | 9 | 87 | 485 | 1 | 390 | 3.54e-29 | 119 |
MS.gene059586.t1 | MTR_2g020710 | 27.027 | 407 | 274 | 9 | 86 | 485 | 89 | 479 | 4.74e-29 | 120 |
MS.gene059586.t1 | MTR_2g026140 | 29.129 | 333 | 189 | 10 | 36 | 355 | 34 | 332 | 3.02e-28 | 118 |
MS.gene059586.t1 | MTR_8g077310 | 29.167 | 288 | 191 | 6 | 86 | 370 | 87 | 364 | 7.54e-28 | 115 |
MS.gene059586.t1 | MTR_4g069500 | 23.585 | 318 | 224 | 5 | 205 | 504 | 1 | 317 | 2.30e-26 | 110 |
MS.gene059586.t1 | MTR_7g113960 | 30.935 | 278 | 168 | 9 | 86 | 355 | 67 | 328 | 3.51e-26 | 110 |
MS.gene059586.t1 | MTR_7g094110 | 25.000 | 424 | 270 | 10 | 67 | 485 | 71 | 451 | 1.93e-24 | 106 |
MS.gene059586.t1 | MTR_7g113970 | 28.060 | 335 | 206 | 11 | 86 | 406 | 102 | 415 | 5.25e-22 | 98.6 |
MS.gene059586.t1 | MTR_3g116060 | 32.308 | 195 | 121 | 3 | 77 | 263 | 31 | 222 | 5.36e-22 | 100 |
MS.gene059586.t1 | MTR_3g116060 | 27.686 | 242 | 155 | 6 | 260 | 489 | 484 | 717 | 2.14e-12 | 70.1 |
MS.gene059586.t1 | MTR_4g118610 | 28.614 | 339 | 217 | 10 | 86 | 416 | 92 | 413 | 1.05e-21 | 97.8 |
MS.gene059586.t1 | MTR_8g073100 | 27.966 | 236 | 157 | 4 | 79 | 306 | 39 | 269 | 8.98e-21 | 96.3 |
MS.gene059586.t1 | MTR_8g073100 | 28.444 | 225 | 141 | 6 | 278 | 489 | 488 | 705 | 6.16e-11 | 65.5 |
MS.gene059586.t1 | MTR_5g024740 | 28.033 | 239 | 151 | 4 | 26 | 262 | 4 | 223 | 2.18e-20 | 95.1 |
MS.gene059586.t1 | MTR_5g044910 | 30.508 | 177 | 122 | 1 | 87 | 262 | 47 | 223 | 3.45e-20 | 94.7 |
MS.gene059586.t1 | MTR_1g114280 | 35.065 | 154 | 79 | 3 | 350 | 501 | 21 | 155 | 2.26e-19 | 85.5 |
MS.gene059586.t1 | MTR_2g020710 | 26.113 | 337 | 226 | 9 | 86 | 415 | 89 | 409 | 2.35e-19 | 90.9 |
MS.gene059586.t1 | MTR_2g020710 | 26.549 | 339 | 224 | 10 | 86 | 416 | 89 | 410 | 2.59e-19 | 90.5 |
MS.gene059586.t1 | MTR_3g118530 | 32.941 | 170 | 113 | 1 | 95 | 263 | 55 | 224 | 4.54e-19 | 91.3 |
MS.gene059586.t1 | MTR_2g020710 | 28.571 | 273 | 174 | 8 | 86 | 351 | 89 | 347 | 5.05e-19 | 89.4 |
MS.gene059586.t1 | MTR_3g118530 | 32.941 | 170 | 113 | 1 | 95 | 263 | 55 | 224 | 9.41e-19 | 90.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059586.t1 | AT1G77210 | 71.032 | 504 | 146 | 0 | 1 | 504 | 1 | 504 | 0.0 | 758 |
MS.gene059586.t1 | AT1G77210 | 71.032 | 504 | 146 | 0 | 1 | 504 | 1 | 504 | 0.0 | 758 |
MS.gene059586.t1 | AT4G02050 | 58.964 | 502 | 203 | 3 | 1 | 501 | 1 | 500 | 0.0 | 624 |
MS.gene059586.t1 | AT4G02050 | 58.964 | 502 | 203 | 3 | 1 | 501 | 1 | 500 | 0.0 | 624 |
MS.gene059586.t1 | AT5G26340 | 56.496 | 508 | 213 | 6 | 1 | 504 | 1 | 504 | 0.0 | 566 |
MS.gene059586.t1 | AT3G19940 | 51.587 | 504 | 240 | 3 | 1 | 502 | 1 | 502 | 0.0 | 537 |
MS.gene059586.t1 | AT1G50310 | 51.287 | 505 | 241 | 4 | 1 | 502 | 1 | 503 | 0.0 | 526 |
MS.gene059586.t1 | AT1G11260 | 52.827 | 513 | 234 | 5 | 1 | 509 | 1 | 509 | 0.0 | 524 |
MS.gene059586.t1 | AT1G77210 | 69.143 | 350 | 108 | 0 | 155 | 504 | 6 | 355 | 0.0 | 516 |
MS.gene059586.t1 | AT5G23270 | 53.507 | 499 | 225 | 6 | 1 | 495 | 1 | 496 | 1.14e-178 | 512 |
MS.gene059586.t1 | AT3G19930 | 50.891 | 505 | 240 | 5 | 1 | 502 | 1 | 500 | 9.78e-177 | 507 |
MS.gene059586.t1 | AT3G19930 | 50.891 | 505 | 240 | 5 | 1 | 502 | 1 | 500 | 9.78e-177 | 507 |
MS.gene059586.t1 | AT4G21480 | 53.909 | 486 | 219 | 4 | 18 | 500 | 15 | 498 | 3.85e-174 | 500 |
MS.gene059586.t1 | AT5G26250 | 48.875 | 489 | 245 | 4 | 18 | 504 | 14 | 499 | 1.64e-164 | 476 |
MS.gene059586.t1 | AT3G05960 | 47.284 | 497 | 259 | 3 | 14 | 509 | 9 | 503 | 1.01e-162 | 471 |
MS.gene059586.t1 | AT5G61520 | 46.012 | 489 | 256 | 4 | 21 | 503 | 19 | 505 | 2.67e-155 | 452 |
MS.gene059586.t1 | AT1G34580 | 44.423 | 511 | 270 | 8 | 1 | 503 | 1 | 505 | 8.27e-148 | 433 |
MS.gene059586.t1 | AT1G07340 | 46.201 | 487 | 256 | 6 | 18 | 501 | 15 | 498 | 2.24e-147 | 432 |
MS.gene059586.t1 | AT5G61520 | 45.197 | 458 | 243 | 4 | 52 | 503 | 2 | 457 | 6.93e-140 | 411 |
MS.gene059586.t1 | AT1G34580 | 44.227 | 459 | 244 | 7 | 53 | 503 | 1 | 455 | 1.73e-132 | 392 |
MS.gene059586.t1 | AT1G50310 | 49.858 | 351 | 172 | 3 | 155 | 502 | 11 | 360 | 8.30e-121 | 359 |
MS.gene059586.t1 | AT2G16130 | 29.569 | 487 | 300 | 9 | 28 | 492 | 27 | 492 | 5.31e-57 | 198 |
MS.gene059586.t1 | AT2G16120 | 28.953 | 487 | 303 | 9 | 28 | 492 | 27 | 492 | 7.72e-56 | 195 |
MS.gene059586.t1 | AT4G36670 | 29.839 | 496 | 300 | 11 | 30 | 503 | 21 | 490 | 3.12e-54 | 190 |
MS.gene059586.t1 | AT2G18480 | 30.998 | 471 | 281 | 12 | 40 | 489 | 36 | 483 | 5.93e-54 | 190 |
MS.gene059586.t1 | AT3G18830 | 27.634 | 503 | 320 | 12 | 28 | 509 | 37 | 516 | 1.26e-53 | 189 |
MS.gene059586.t1 | AT5G59250 | 29.586 | 507 | 307 | 14 | 3 | 485 | 72 | 552 | 1.64e-46 | 171 |
MS.gene059586.t1 | AT5G17010 | 28.425 | 489 | 312 | 9 | 12 | 485 | 33 | 498 | 4.41e-46 | 168 |
MS.gene059586.t1 | AT5G17010 | 28.425 | 489 | 312 | 9 | 12 | 485 | 33 | 498 | 4.41e-46 | 168 |
MS.gene059586.t1 | AT5G17010 | 28.425 | 489 | 312 | 9 | 12 | 485 | 33 | 498 | 4.41e-46 | 168 |
MS.gene059586.t1 | AT4G16480 | 28.376 | 585 | 295 | 19 | 23 | 510 | 24 | 581 | 5.70e-46 | 169 |
MS.gene059586.t1 | AT4G16480 | 28.376 | 585 | 295 | 19 | 23 | 510 | 24 | 581 | 5.70e-46 | 169 |
MS.gene059586.t1 | AT4G16480 | 28.376 | 585 | 295 | 19 | 23 | 510 | 24 | 581 | 5.70e-46 | 169 |
MS.gene059586.t1 | AT5G16150 | 28.330 | 473 | 305 | 9 | 19 | 487 | 98 | 540 | 4.97e-45 | 166 |
MS.gene059586.t1 | AT5G16150 | 28.330 | 473 | 305 | 9 | 19 | 487 | 98 | 540 | 4.97e-45 | 166 |
MS.gene059586.t1 | AT5G16150 | 28.330 | 473 | 305 | 9 | 19 | 487 | 98 | 540 | 4.97e-45 | 166 |
MS.gene059586.t1 | AT2G20780 | 27.912 | 498 | 315 | 16 | 13 | 497 | 42 | 508 | 8.21e-44 | 162 |
MS.gene059586.t1 | AT2G43330 | 29.079 | 478 | 304 | 10 | 25 | 492 | 30 | 482 | 2.78e-43 | 160 |
MS.gene059586.t1 | AT2G20780 | 30.238 | 420 | 269 | 14 | 91 | 497 | 42 | 450 | 8.36e-42 | 156 |
MS.gene059586.t1 | AT3G03090 | 27.953 | 508 | 311 | 12 | 2 | 485 | 22 | 498 | 1.63e-41 | 155 |
MS.gene059586.t1 | AT1G08930 | 29.138 | 429 | 250 | 13 | 86 | 492 | 98 | 494 | 1.82e-41 | 155 |
MS.gene059586.t1 | AT1G08930 | 29.138 | 429 | 250 | 13 | 86 | 492 | 98 | 494 | 1.82e-41 | 155 |
MS.gene059586.t1 | AT1G05030 | 30.340 | 412 | 269 | 11 | 82 | 487 | 64 | 463 | 9.44e-41 | 153 |
MS.gene059586.t1 | AT1G05030 | 29.004 | 462 | 291 | 13 | 32 | 487 | 85 | 515 | 1.44e-40 | 153 |
MS.gene059586.t1 | AT1G75220 | 28.362 | 409 | 280 | 6 | 86 | 490 | 88 | 487 | 1.48e-40 | 153 |
MS.gene059586.t1 | AT1G19450 | 28.851 | 409 | 278 | 6 | 86 | 490 | 89 | 488 | 7.49e-40 | 150 |
MS.gene059586.t1 | AT2G48020 | 28.710 | 411 | 261 | 8 | 86 | 485 | 68 | 457 | 1.94e-39 | 149 |
MS.gene059586.t1 | AT2G48020 | 28.710 | 411 | 261 | 8 | 86 | 485 | 68 | 457 | 1.94e-39 | 149 |
MS.gene059586.t1 | AT3G05400 | 28.979 | 421 | 259 | 13 | 86 | 491 | 66 | 461 | 1.80e-38 | 146 |
MS.gene059586.t1 | AT1G08900 | 28.642 | 405 | 269 | 8 | 86 | 485 | 23 | 412 | 2.33e-38 | 145 |
MS.gene059586.t1 | AT1G08900 | 28.642 | 405 | 269 | 8 | 86 | 485 | 57 | 446 | 4.32e-38 | 145 |
MS.gene059586.t1 | AT1G08900 | 28.642 | 405 | 269 | 8 | 86 | 485 | 65 | 454 | 4.40e-38 | 145 |
MS.gene059586.t1 | AT1G08900 | 28.642 | 405 | 269 | 8 | 86 | 485 | 65 | 454 | 4.40e-38 | 145 |
MS.gene059586.t1 | AT1G30220 | 30.056 | 356 | 222 | 9 | 7 | 355 | 10 | 345 | 3.21e-37 | 145 |
MS.gene059586.t1 | AT1G67300 | 27.297 | 381 | 259 | 7 | 111 | 485 | 118 | 486 | 3.50e-37 | 143 |
MS.gene059586.t1 | AT5G27360 | 28.364 | 483 | 284 | 13 | 19 | 485 | 28 | 464 | 3.95e-37 | 143 |
MS.gene059586.t1 | AT1G79820 | 26.862 | 376 | 264 | 5 | 111 | 485 | 121 | 486 | 9.04e-37 | 142 |
MS.gene059586.t1 | AT1G79820 | 26.862 | 376 | 264 | 5 | 111 | 485 | 121 | 486 | 9.04e-37 | 142 |
MS.gene059586.t1 | AT5G27360 | 28.364 | 483 | 284 | 13 | 19 | 485 | 76 | 512 | 1.23e-36 | 142 |
MS.gene059586.t1 | AT5G27350 | 27.551 | 490 | 279 | 12 | 19 | 485 | 24 | 460 | 1.36e-36 | 141 |
MS.gene059586.t1 | AT1G67300 | 27.353 | 340 | 233 | 6 | 111 | 448 | 118 | 445 | 1.45e-36 | 141 |
MS.gene059586.t1 | AT1G67300 | 27.353 | 340 | 233 | 6 | 111 | 448 | 118 | 445 | 1.45e-36 | 141 |
MS.gene059586.t1 | AT3G05400 | 30.750 | 400 | 227 | 15 | 117 | 491 | 67 | 441 | 1.59e-36 | 140 |
MS.gene059586.t1 | AT3G05155 | 26.650 | 409 | 270 | 9 | 86 | 485 | 67 | 454 | 1.87e-36 | 140 |
MS.gene059586.t1 | AT4G04760 | 30.184 | 434 | 270 | 10 | 68 | 492 | 2 | 411 | 2.35e-36 | 140 |
MS.gene059586.t1 | AT4G04750 | 29.016 | 386 | 258 | 8 | 111 | 492 | 145 | 518 | 2.95e-36 | 141 |
MS.gene059586.t1 | AT1G54730 | 27.475 | 404 | 275 | 8 | 86 | 485 | 72 | 461 | 2.99e-36 | 140 |
MS.gene059586.t1 | AT4G04750 | 29.016 | 386 | 258 | 8 | 111 | 492 | 101 | 474 | 3.34e-36 | 140 |
MS.gene059586.t1 | AT4G04750 | 29.016 | 386 | 258 | 8 | 111 | 492 | 101 | 474 | 3.34e-36 | 140 |
MS.gene059586.t1 | AT1G67300 | 27.297 | 381 | 258 | 7 | 111 | 485 | 118 | 485 | 3.88e-36 | 140 |
MS.gene059586.t1 | AT1G67300 | 27.297 | 381 | 258 | 7 | 111 | 485 | 118 | 485 | 3.88e-36 | 140 |
MS.gene059586.t1 | AT4G04760 | 30.184 | 434 | 270 | 10 | 68 | 492 | 61 | 470 | 8.12e-36 | 139 |
MS.gene059586.t1 | AT3G05150 | 28.256 | 407 | 269 | 8 | 86 | 485 | 75 | 465 | 1.11e-35 | 139 |
MS.gene059586.t1 | AT3G05150 | 28.256 | 407 | 269 | 8 | 86 | 485 | 75 | 465 | 1.23e-35 | 139 |
MS.gene059586.t1 | AT3G05150 | 28.256 | 407 | 269 | 8 | 86 | 485 | 75 | 465 | 1.23e-35 | 139 |
MS.gene059586.t1 | AT1G08890 | 29.238 | 407 | 264 | 10 | 86 | 485 | 67 | 456 | 1.96e-35 | 138 |
MS.gene059586.t1 | AT1G67300 | 27.273 | 319 | 220 | 5 | 111 | 427 | 118 | 426 | 4.37e-35 | 136 |
MS.gene059586.t1 | AT1G67300 | 27.273 | 319 | 220 | 5 | 111 | 427 | 118 | 426 | 4.37e-35 | 136 |
MS.gene059586.t1 | AT5G27360 | 29.363 | 361 | 233 | 8 | 131 | 485 | 16 | 360 | 5.00e-35 | 135 |
MS.gene059586.t1 | AT5G27360 | 29.363 | 361 | 233 | 8 | 131 | 485 | 16 | 360 | 5.00e-35 | 135 |
MS.gene059586.t1 | AT5G18840 | 29.657 | 408 | 262 | 10 | 86 | 485 | 84 | 474 | 5.10e-35 | 137 |
MS.gene059586.t1 | AT2G35740 | 27.763 | 371 | 227 | 9 | 25 | 381 | 25 | 368 | 5.15e-35 | 138 |
MS.gene059586.t1 | AT1G79820 | 26.769 | 325 | 228 | 4 | 111 | 435 | 121 | 435 | 5.24e-35 | 137 |
MS.gene059586.t1 | AT3G05160 | 28.780 | 410 | 258 | 12 | 88 | 485 | 14 | 401 | 6.63e-34 | 132 |
MS.gene059586.t1 | AT3G05160 | 28.780 | 410 | 258 | 12 | 88 | 485 | 14 | 401 | 6.63e-34 | 132 |
MS.gene059586.t1 | AT3G05165 | 29.156 | 391 | 235 | 12 | 111 | 485 | 95 | 459 | 7.62e-34 | 134 |
MS.gene059586.t1 | AT3G05165 | 29.156 | 391 | 235 | 12 | 111 | 485 | 95 | 459 | 7.62e-34 | 134 |
MS.gene059586.t1 | AT3G05165 | 29.156 | 391 | 235 | 12 | 111 | 485 | 95 | 459 | 7.62e-34 | 134 |
MS.gene059586.t1 | AT3G05160 | 28.780 | 410 | 258 | 12 | 88 | 485 | 63 | 450 | 1.04e-33 | 133 |
MS.gene059586.t1 | AT1G08900 | 29.444 | 360 | 234 | 8 | 86 | 440 | 65 | 409 | 2.22e-32 | 129 |
MS.gene059586.t1 | AT1G08920 | 26.214 | 412 | 270 | 10 | 86 | 485 | 72 | 461 | 2.29e-32 | 129 |
MS.gene059586.t1 | AT4G04760 | 29.561 | 433 | 269 | 11 | 68 | 491 | 61 | 466 | 3.77e-32 | 129 |
MS.gene059586.t1 | AT1G54730 | 26.667 | 360 | 246 | 8 | 86 | 441 | 72 | 417 | 2.58e-31 | 126 |
MS.gene059586.t1 | AT1G08920 | 25.776 | 419 | 270 | 10 | 86 | 485 | 72 | 468 | 2.81e-31 | 126 |
MS.gene059586.t1 | AT1G54730 | 25.743 | 404 | 261 | 8 | 86 | 485 | 72 | 440 | 1.86e-29 | 120 |
MS.gene059586.t1 | AT3G20460 | 27.670 | 412 | 264 | 11 | 86 | 485 | 93 | 482 | 2.00e-28 | 118 |
MS.gene059586.t1 | AT3G05165 | 29.552 | 335 | 194 | 12 | 111 | 429 | 95 | 403 | 3.05e-28 | 118 |
MS.gene059586.t1 | AT3G05165 | 29.552 | 335 | 194 | 12 | 111 | 429 | 95 | 403 | 4.53e-28 | 117 |
MS.gene059586.t1 | AT3G05165 | 29.552 | 335 | 194 | 12 | 111 | 429 | 95 | 403 | 4.53e-28 | 117 |
MS.gene059586.t1 | AT1G08920 | 25.815 | 368 | 239 | 10 | 86 | 441 | 72 | 417 | 2.53e-27 | 114 |
MS.gene059586.t1 | AT2G48020 | 29.693 | 293 | 177 | 7 | 86 | 367 | 68 | 342 | 1.81e-26 | 111 |
MS.gene059586.t1 | AT3G51490 | 30.126 | 239 | 148 | 5 | 26 | 263 | 4 | 224 | 4.12e-25 | 109 |
MS.gene059586.t1 | AT3G51490 | 30.126 | 239 | 148 | 5 | 26 | 263 | 4 | 224 | 4.32e-25 | 109 |
MS.gene059586.t1 | AT3G51490 | 35.057 | 174 | 111 | 2 | 91 | 263 | 2 | 174 | 5.22e-25 | 109 |
MS.gene059586.t1 | AT1G54730 | 25.970 | 335 | 230 | 8 | 86 | 416 | 72 | 392 | 7.08e-25 | 107 |
MS.gene059586.t1 | AT1G54730 | 25.970 | 335 | 230 | 8 | 86 | 416 | 72 | 392 | 7.08e-25 | 107 |
MS.gene059586.t1 | AT1G54730 | 24.722 | 360 | 232 | 8 | 86 | 441 | 72 | 396 | 1.53e-24 | 106 |
MS.gene059586.t1 | AT3G05155 | 26.619 | 278 | 177 | 7 | 86 | 355 | 67 | 325 | 2.63e-24 | 103 |
MS.gene059586.t1 | AT2G48020 | 29.286 | 280 | 170 | 6 | 86 | 355 | 68 | 329 | 2.84e-24 | 104 |
MS.gene059586.t1 | AT1G79820 | 24.468 | 376 | 225 | 5 | 111 | 485 | 121 | 438 | 4.30e-24 | 105 |
MS.gene059586.t1 | AT5G27360 | 26.905 | 420 | 245 | 13 | 19 | 422 | 28 | 401 | 1.09e-23 | 103 |
MS.gene059586.t1 | AT1G54730 | 26.374 | 273 | 187 | 5 | 86 | 355 | 72 | 333 | 1.51e-23 | 102 |
MS.gene059586.t1 | AT5G17010 | 24.744 | 489 | 270 | 13 | 12 | 485 | 30 | 435 | 1.33e-22 | 100 |
MS.gene059586.t1 | AT1G79820 | 24.862 | 362 | 209 | 6 | 127 | 485 | 75 | 376 | 2.57e-21 | 96.3 |
MS.gene059586.t1 | AT1G54730 | 25.896 | 251 | 175 | 4 | 86 | 333 | 72 | 314 | 4.79e-21 | 94.7 |
MS.gene059586.t1 | AT1G54730 | 25.896 | 251 | 175 | 4 | 86 | 333 | 72 | 314 | 4.79e-21 | 94.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 8.70e-21 | 96.7 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 1.02e-20 | 96.3 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 1.02e-20 | 96.3 |
MS.gene059586.t1 | AT4G35300 | 34.483 | 174 | 112 | 2 | 91 | 263 | 52 | 224 | 1.02e-20 | 96.3 |
MS.gene059586.t1 | AT1G54730 | 25.498 | 251 | 176 | 4 | 86 | 333 | 72 | 314 | 3.21e-20 | 93.2 |
MS.gene059586.t1 | AT1G20840 | 30.208 | 192 | 126 | 2 | 80 | 263 | 31 | 222 | 5.33e-19 | 90.9 |
MS.gene059586.t1 | AT1G20840 | 30.208 | 192 | 126 | 2 | 80 | 263 | 31 | 222 | 5.33e-19 | 90.9 |
Find 101 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGGAACTTGCTTGGTTTC+TGG | 0.107517 | 6.4:-61236560 | None:intergenic |
ACAAGACTGTTTGGTGTTTC+TGG | 0.173809 | 6.4:-61235023 | None:intergenic |
GCAAGAAGATTCCGTATTTA+AGG | 0.184615 | 6.4:-61236487 | None:intergenic |
GCACTTGGTGGCGCTCTATT+TGG | 0.204575 | 6.4:+61233095 | MS.gene059586:CDS |
GGATATGATCTTGGTGTTTC+AGG | 0.205684 | 6.4:+61233116 | MS.gene059586:CDS |
CTTGGAGTTGGTATTGGATT+TGG | 0.262672 | 6.4:+61233863 | MS.gene059586:CDS |
TTCCTAAACATGTTGTTAAC+TGG | 0.274361 | 6.4:-61234881 | None:intergenic |
CTTTATGAGCATAAGATTAC+TGG | 0.274894 | 6.4:+61233044 | MS.gene059586:CDS |
ATTGCTAACCTTGTGAATTA+TGG | 0.277757 | 6.4:+61234909 | MS.gene059586:CDS |
ATCATTGGACGTATTCTTCT+TGG | 0.284861 | 6.4:+61233845 | MS.gene059586:CDS |
TGCTTCCTCTCATACACATT+TGG | 0.294387 | 6.4:-61233611 | None:intergenic |
GATCAACATTGATATATTCT+TGG | 0.304916 | 6.4:-61233825 | None:intergenic |
CCAATTGTTTGGAAAATAAC+AGG | 0.316014 | 6.4:-61235278 | None:intergenic |
GCTGCTCTTGTGTCCACATT+TGG | 0.331542 | 6.4:+61233710 | MS.gene059586:CDS |
ATCTTCTGTTTGAGAATCAT+TGG | 0.334480 | 6.4:+61236594 | MS.gene059586:CDS |
TGTTTGAGAATCATTGGTTT+TGG | 0.335335 | 6.4:+61236600 | MS.gene059586:CDS |
TACACTCATCTCAATGGCTT+TGG | 0.339050 | 6.4:+61235361 | MS.gene059586:CDS |
CCAGCAACATTCATGTTCAT+TGG | 0.340067 | 6.4:+61234987 | MS.gene059586:CDS |
GCAGATGACCTTATCTCTAA+TGG | 0.355097 | 6.4:-61236389 | None:intergenic |
CCAGCATTTCAACAACTAAC+TGG | 0.358134 | 6.4:+61235230 | MS.gene059586:CDS |
GAAGATCTTGGGGTCCCTTA+GGG | 0.359127 | 6.4:+61236342 | MS.gene059586:CDS |
GATTGCCACAGCTATAGTTT+TGG | 0.362236 | 6.4:+61236232 | MS.gene059586:intron |
ATGGCTTTGGTTGACAAGTT+TGG | 0.363390 | 6.4:+61235374 | MS.gene059586:CDS |
GGAAGATCTTGGGGTCCCTT+AGG | 0.366556 | 6.4:+61236341 | MS.gene059586:CDS |
TTCCAGTTAACAACATGTTT+AGG | 0.367924 | 6.4:+61234879 | MS.gene059586:CDS |
CCTTGTTCCACAAGACTGTT+TGG | 0.369419 | 6.4:-61235032 | None:intergenic |
CAGAGCCAAATCCAATTGTT+TGG | 0.371830 | 6.4:-61235289 | None:intergenic |
TTGGGGTCCCTTAGGGTGGT+TGG | 0.373657 | 6.4:+61236349 | MS.gene059586:CDS |
ATTCTTCTTGGAGTTGGTAT+TGG | 0.373658 | 6.4:+61233857 | MS.gene059586:CDS |
TCCTCTATATCTTTCAGAAA+TGG | 0.385342 | 6.4:+61234821 | MS.gene059586:CDS |
CTCAAAAGGAGATTCTGAAA+TGG | 0.385487 | 6.4:-61235167 | None:intergenic |
GCTCTATTTGGATATGATCT+TGG | 0.388294 | 6.4:+61233107 | MS.gene059586:CDS |
CTCTTCAATTGGAACTTGCT+TGG | 0.389604 | 6.4:-61236567 | None:intergenic |
CTACTCTTCCTTCGTCGATT+CGG | 0.391327 | 6.4:-61235055 | None:intergenic |
GAGGTCTATTCTTTCTCAAA+AGG | 0.398721 | 6.4:-61235181 | None:intergenic |
CAAACAATTGGATTTGGCTC+TGG | 0.401668 | 6.4:+61235290 | MS.gene059586:CDS |
GCTTCCTCTCATACACATTT+GGG | 0.404907 | 6.4:-61233610 | None:intergenic |
AGAAGATAAATCTCTTCAAT+TGG | 0.412850 | 6.4:-61236578 | None:intergenic |
GATGGAAAACAACTGTCATT+TGG | 0.414524 | 6.4:+61236269 | MS.gene059586:CDS |
CCAATGAACATGAATGTTGC+TGG | 0.414552 | 6.4:-61234987 | None:intergenic |
AGTAGACAAAGCAGCTCATA+AGG | 0.415528 | 6.4:-61236529 | None:intergenic |
TTTGGCATATGGAAGATCTT+GGG | 0.420424 | 6.4:+61236331 | MS.gene059586:CDS |
CTTGCTTGGTTTCTGGCAAT+AGG | 0.429274 | 6.4:-61236553 | None:intergenic |
AATATATCAATGTTGATCAT+TGG | 0.433605 | 6.4:+61233830 | MS.gene059586:CDS |
TACTGAGAAAATTCACCCTT+GGG | 0.434323 | 6.4:+61234932 | MS.gene059586:CDS |
TGGGGATGGAGGCTATCCTT+AGG | 0.436898 | 6.4:+61234951 | MS.gene059586:CDS |
CCAGTTAGTTGTTGAAATGC+TGG | 0.437664 | 6.4:-61235230 | None:intergenic |
AACTCTTTCCATTAGAGATA+AGG | 0.443050 | 6.4:+61236381 | MS.gene059586:CDS |
CGACGAAGGAAGAGTAGTAC+TGG | 0.450629 | 6.4:+61235061 | MS.gene059586:CDS |
GGACGTATTCTTCTTGGAGT+TGG | 0.452238 | 6.4:+61233851 | MS.gene059586:CDS |
TCACTTTGCCACCTTAAATA+CGG | 0.453634 | 6.4:+61236476 | MS.gene059586:CDS |
AGGAGAGCTAGTATCTTAGT+TGG | 0.456742 | 6.4:+61233761 | MS.gene059586:CDS |
GTAGTACTGGAAAAGATTAG+AGG | 0.468764 | 6.4:+61235074 | MS.gene059586:CDS |
GCCATTTCTGAAAGATATAG+AGG | 0.470895 | 6.4:-61234822 | None:intergenic |
AATAGACCTCAATTCATCAT+TGG | 0.473706 | 6.4:+61235194 | MS.gene059586:CDS |
TGCATTATTGGTGCACTTGG+TGG | 0.476118 | 6.4:+61233083 | MS.gene059586:CDS |
TCTTGCTACACTCATCTCAA+TGG | 0.483416 | 6.4:+61235355 | MS.gene059586:CDS |
TCTTGCATTATTGGTGCACT+TGG | 0.495123 | 6.4:+61233080 | MS.gene059586:CDS |
AGAAAATTCACCCTTGGGGA+TGG | 0.501248 | 6.4:+61234937 | MS.gene059586:CDS |
ATAAAGATGAGCCCTCTTGA+GGG | 0.508927 | 6.4:-61233027 | None:intergenic |
GATCTTGGGGTCCCTTAGGG+TGG | 0.511703 | 6.4:+61236345 | MS.gene059586:CDS |
TTGGCATATGGAAGATCTTG+GGG | 0.514199 | 6.4:+61236332 | MS.gene059586:CDS |
AGAATTCGATGATCTTATTG+AGG | 0.537749 | 6.4:+61235115 | MS.gene059586:CDS |
TTTAGCTTATGCTTGTGTCT+CGG | 0.537950 | 6.4:-61236654 | None:intergenic |
CATAAAGATGAGCCCTCTTG+AGG | 0.543236 | 6.4:-61233028 | None:intergenic |
GCAACATTCATGTTCATTGG+AGG | 0.543345 | 6.4:+61234990 | MS.gene059586:CDS |
CTTTGGTTGACAAGTTTGGT+AGG | 0.544568 | 6.4:+61235378 | MS.gene059586:CDS |
GTACTGAGAAAATTCACCCT+TGG | 0.549057 | 6.4:+61234931 | MS.gene059586:CDS |
TTCAATGAGGAAATCATCCA+TGG | 0.549795 | 6.4:-61233582 | None:intergenic |
TATTGTCAAGGACGAAAACA+AGG | 0.557245 | 6.4:+61236628 | MS.gene059586:CDS |
ATGTTGTTAACTGGAAGAGT+TGG | 0.557976 | 6.4:-61234872 | None:intergenic |
ACTAGGAACCAACCACCCTA+AGG | 0.558058 | 6.4:-61236357 | None:intergenic |
AAAAGTTAGGGGAAAATGGC+AGG | 0.558336 | 6.4:+61232981 | None:intergenic |
CACAGGTGGTGTTACTTCCA+TGG | 0.565297 | 6.4:+61233565 | MS.gene059586:intron |
TGGAACTGTTGCTAAACCTA+AGG | 0.567484 | 6.4:-61234967 | None:intergenic |
TCTAATGGAAAGAGTTCACT+AGG | 0.569504 | 6.4:-61236374 | None:intergenic |
TAGACTTGAAGCACCAAATG+TGG | 0.573480 | 6.4:-61233723 | None:intergenic |
CCAAACAGTCTTGTGGAACA+AGG | 0.574342 | 6.4:+61235032 | MS.gene059586:CDS |
AAATTCACCCTTGGGGATGG+AGG | 0.582472 | 6.4:+61234940 | MS.gene059586:CDS |
AAGGATAGCCTCCATCCCCA+AGG | 0.585207 | 6.4:-61234948 | None:intergenic |
ATTGCACCAATGATGAATTG+AGG | 0.586290 | 6.4:-61235200 | None:intergenic |
TCTTCCCAAATGTGTATGAG+AGG | 0.597203 | 6.4:+61233606 | MS.gene059586:CDS |
AGAAACACCAAACAGTCTTG+TGG | 0.605301 | 6.4:+61235025 | MS.gene059586:CDS |
CTAGGAACCAACCACCCTAA+GGG | 0.605522 | 6.4:-61236356 | None:intergenic |
AAGGAAGAATTGTGCGACGA+TGG | 0.620883 | 6.4:-61236450 | None:intergenic |
AGAAGATTCCGTATTTAAGG+TGG | 0.621906 | 6.4:-61236484 | None:intergenic |
GCAGGTGGAGCATTTGCAGA+TGG | 0.625709 | 6.4:+61232999 | MS.gene059586:CDS |
TCTCAGTACCATAATTCACA+AGG | 0.628815 | 6.4:-61234917 | None:intergenic |
CAGATGGTAGCACCCTCAAG+AGG | 0.631499 | 6.4:+61233015 | MS.gene059586:CDS |
AGGATAGCCTCCATCCCCAA+GGG | 0.641594 | 6.4:-61234947 | None:intergenic |
TACTGAAATGATAATATGCA+TGG | 0.645085 | 6.4:+61235424 | MS.gene059586:CDS |
GAACAAGGCCGAATCGACGA+AGG | 0.647528 | 6.4:+61235047 | MS.gene059586:CDS |
AGATGGTAGCACCCTCAAGA+GGG | 0.662568 | 6.4:+61233016 | MS.gene059586:CDS |
AGTAGCCAAAACTATAGCTG+TGG | 0.663529 | 6.4:-61236237 | None:intergenic |
ATTGTCAAGGACGAAAACAA+GGG | 0.664475 | 6.4:+61236629 | MS.gene059586:CDS |
GTCATCTGCACAAAGTGTTG+TGG | 0.672138 | 6.4:+61236403 | MS.gene059586:CDS |
TAAGGTGGCAAAGTGACACA+AGG | 0.685068 | 6.4:-61236469 | None:intergenic |
AGTTAGGGGAAAATGGCAGG+TGG | 0.686132 | 6.4:+61232984 | None:intergenic |
TTGTCAAGGACGAAAACAAG+GGG | 0.689476 | 6.4:+61236630 | MS.gene059586:CDS |
CATTTGGGAAGAATTCAATG+AGG | 0.699343 | 6.4:-61233595 | None:intergenic |
ACTGAGAAAATTCACCCTTG+GGG | 0.704912 | 6.4:+61234933 | MS.gene059586:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTTTTTCTAAATAAACT+AGG | + | chr6.4:61235677-61235696 | MS.gene059586:intron | 10.0% |
!! | GATCTAAAAAAACAATTAAA+AGG | + | chr6.4:61235513-61235532 | MS.gene059586:intron | 15.0% |
!! | TTATAACTATGTTAAAGTAT+TGG | - | chr6.4:61234708-61234727 | None:intergenic | 15.0% |
!!! | AAATATAGTAGATTTTGTAT+TGG | - | chr6.4:61234644-61234663 | None:intergenic | 15.0% |
!!! | CATGATTTTTCTAATTATTA+TGG | + | chr6.4:61234788-61234807 | MS.gene059586:intron | 15.0% |
!!! | TAGAAAAAATTATCTAAAGT+AGG | - | chr6.4:61235669-61235688 | None:intergenic | 15.0% |
!! | AACGATTAATCATAAACTAA+CGG | + | chr6.4:61233520-61233539 | MS.gene059586:intron | 20.0% |
!! | AATATATCAATGTTGATCAT+TGG | + | chr6.4:61233830-61233849 | MS.gene059586:CDS | 20.0% |
!! | ATTAGAGATACATGAAAAAT+TGG | - | chr6.4:61233945-61233964 | None:intergenic | 20.0% |
!! | TAAAATACAATCATCAATGA+AGG | - | chr6.4:61233257-61233276 | None:intergenic | 20.0% |
!! | TCACATAAATGCTTATTTAT+AGG | - | chr6.4:61236081-61236100 | None:intergenic | 20.0% |
!! | TCTTAAAACATGATTATACT+AGG | - | chr6.4:61233985-61234004 | None:intergenic | 20.0% |
!! | TTTCAAATTATTAGTTGTGT+CGG | - | chr6.4:61235852-61235871 | None:intergenic | 20.0% |
!!! | AATTTGAGAATTTTTTTTGG+TGG | + | chr6.4:61236195-61236214 | MS.gene059586:intron | 20.0% |
!!! | AGTGATTTTCTTATTTGTTT+TGG | + | chr6.4:61236313-61236332 | MS.gene059586:CDS | 20.0% |
!!! | ATTTTTATTTCACATAAGGT+GGG | - | chr6.4:61234241-61234260 | None:intergenic | 20.0% |
!!! | CAAAATTATGTTTCTACATT+AGG | + | chr6.4:61235595-61235614 | MS.gene059586:intron | 20.0% |
!!! | CTAATGTAGAAACATAATTT+TGG | - | chr6.4:61235597-61235616 | None:intergenic | 20.0% |
!!! | GCTAATTTGAGAATTTTTTT+TGG | + | chr6.4:61236192-61236211 | MS.gene059586:intron | 20.0% |
!!! | TGAGATTTTTATTTCACATA+AGG | - | chr6.4:61234245-61234264 | None:intergenic | 20.0% |
! | AATTTGTCAACACTTTGTAT+TGG | + | chr6.4:61234063-61234082 | MS.gene059586:intron | 25.0% |
! | AGAAGATAAATCTCTTCAAT+TGG | - | chr6.4:61236581-61236600 | None:intergenic | 25.0% |
! | ATTAACCATTCAATTTCCAA+AGG | + | chr6.4:61233374-61233393 | MS.gene059586:intron | 25.0% |
! | CAAATTAGCAACAAAAAAAG+TGG | - | chr6.4:61236181-61236200 | None:intergenic | 25.0% |
! | CCTCATAATACCAATTTATA+AGG | - | chr6.4:61234155-61234174 | None:intergenic | 25.0% |
! | CCTTATAAATTGGTATTATG+AGG | + | chr6.4:61234152-61234171 | MS.gene059586:intron | 25.0% |
! | GATCAACATTGATATATTCT+TGG | - | chr6.4:61233828-61233847 | None:intergenic | 25.0% |
! | GGCAAAATCAAAATATGTAT+TGG | - | chr6.4:61233182-61233201 | None:intergenic | 25.0% |
! | TAATACCAATTTATAAGGTG+AGG | - | chr6.4:61234150-61234169 | None:intergenic | 25.0% |
! | TACTGAAATGATAATATGCA+TGG | + | chr6.4:61235424-61235443 | MS.gene059586:CDS | 25.0% |
! | TCAAGTCTAACAAAAAACAA+AGG | + | chr6.4:61233737-61233756 | MS.gene059586:CDS | 25.0% |
! | TCATATTGAATAGACAGATA+AGG | + | chr6.4:61234099-61234118 | MS.gene059586:intron | 25.0% |
! | TCTCATATTGAATAGAGATA+AGG | + | chr6.4:61234260-61234279 | MS.gene059586:intron | 25.0% |
! | TGATTTCCTATTCTTATAAG+TGG | - | chr6.4:61233203-61233222 | None:intergenic | 25.0% |
! | TTCAGTATAATTACAAGTGT+CGG | + | chr6.4:61235883-61235902 | MS.gene059586:intron | 25.0% |
! | TTGTATTGGAAATTGTGTAA+TGG | - | chr6.4:61234630-61234649 | None:intergenic | 25.0% |
! | TTTGTTCACCAAATACTTTA+GGG | + | chr6.4:61234512-61234531 | MS.gene059586:intron | 25.0% |
!! | ATCTAAAGTAGGTTAAAACA+GGG | - | chr6.4:61235658-61235677 | None:intergenic | 25.0% |
!! | ATTTTCCAAACAATTGGATT+TGG | + | chr6.4:61235284-61235303 | MS.gene059586:CDS | 25.0% |
!! | CTCATATTTTCTTGCATTAT+TGG | + | chr6.4:61233071-61233090 | MS.gene059586:CDS | 25.0% |
!! | GTGAACAAAACTTGATTTTA+AGG | - | chr6.4:61234501-61234520 | None:intergenic | 25.0% |
!! | TATCTAAAGTAGGTTAAAAC+AGG | - | chr6.4:61235659-61235678 | None:intergenic | 25.0% |
!! | TTGATAATTTAGAGTTTCGT+CGG | + | chr6.4:61233438-61233457 | MS.gene059586:intron | 25.0% |
!! | TTTTCTAATTATTATGGTGC+AGG | + | chr6.4:61234794-61234813 | MS.gene059586:intron | 25.0% |
!! | TTTTGTTCACCAAATACTTT+AGG | + | chr6.4:61234511-61234530 | MS.gene059586:intron | 25.0% |
!!! | AACAAAACTTGATTTTAAGG+TGG | - | chr6.4:61234498-61234517 | None:intergenic | 25.0% |
!!! | ACAAAACTTGATTTTAAGGT+GGG | - | chr6.4:61234497-61234516 | None:intergenic | 25.0% |
!!! | AGGTTATTTCTGTAACAAAA+AGG | - | chr6.4:61236061-61236080 | None:intergenic | 25.0% |
!!! | ATTTTGCCACTTATAAGAAT+AGG | + | chr6.4:61233194-61233213 | MS.gene059586:intron | 25.0% |
!!! | GATTTTTATTTCACATAAGG+TGG | - | chr6.4:61234242-61234261 | None:intergenic | 25.0% |
!!! | TTCTTATTTGTTTTGGCATA+TGG | + | chr6.4:61236320-61236339 | MS.gene059586:CDS | 25.0% |
!!! | TTTTTATTTCACATAAGGTG+GGG | - | chr6.4:61234240-61234259 | None:intergenic | 25.0% |
AACTCTTTCCATTAGAGATA+AGG | + | chr6.4:61236381-61236400 | MS.gene059586:CDS | 30.0% | |
AACTTATGAACTATGAAGCA+CGG | - | chr6.4:61235951-61235970 | None:intergenic | 30.0% | |
AATAGACCTCAATTCATCAT+TGG | + | chr6.4:61235194-61235213 | MS.gene059586:CDS | 30.0% | |
AATAGAGATAAGGTCTTACA+TGG | + | chr6.4:61234270-61234289 | MS.gene059586:intron | 30.0% | |
AATGACCTCACCTTATAAAT+TGG | + | chr6.4:61234142-61234161 | MS.gene059586:intron | 30.0% | |
AGAATTCGATGATCTTATTG+AGG | + | chr6.4:61235115-61235134 | MS.gene059586:CDS | 30.0% | |
ATAGAGATAAGGTCTTACAT+GGG | + | chr6.4:61234271-61234290 | MS.gene059586:intron | 30.0% | |
ATCTTCTGTTTGAGAATCAT+TGG | + | chr6.4:61236594-61236613 | MS.gene059586:CDS | 30.0% | |
ATTGCTAACCTTGTGAATTA+TGG | + | chr6.4:61234909-61234928 | MS.gene059586:CDS | 30.0% | |
CCAATTGTTTGGAAAATAAC+AGG | - | chr6.4:61235281-61235300 | None:intergenic | 30.0% | |
CTGGTTAAGGAATCTAAAAA+AGG | + | chr6.4:61234561-61234580 | MS.gene059586:intron | 30.0% | |
CTTATTTCCATAAGCTCAAT+AGG | + | chr6.4:61235979-61235998 | MS.gene059586:intron | 30.0% | |
CTTTATGAGCATAAGATTAC+TGG | + | chr6.4:61233044-61233063 | MS.gene059586:CDS | 30.0% | |
GTCTAACAAAAAACAAAGGA+AGG | + | chr6.4:61233741-61233760 | MS.gene059586:CDS | 30.0% | |
TCCTCTATATCTTTCAGAAA+TGG | + | chr6.4:61234821-61234840 | MS.gene059586:CDS | 30.0% | |
TGACAAAAGATTGTTGTAGT+CGG | + | chr6.4:61233475-61233494 | MS.gene059586:intron | 30.0% | |
TTCCAGTTAACAACATGTTT+AGG | + | chr6.4:61234879-61234898 | MS.gene059586:CDS | 30.0% | |
TTCCTAAACATGTTGTTAAC+TGG | - | chr6.4:61234884-61234903 | None:intergenic | 30.0% | |
TTCTAAATAAACTAGGTGCT+TGG | + | chr6.4:61235684-61235703 | MS.gene059586:intron | 30.0% | |
! | AAGTATTTCTTGATGATCAC+AGG | + | chr6.4:61233548-61233567 | MS.gene059586:intron | 30.0% |
! | CCAATAGTGTTGAACATAAA+GGG | + | chr6.4:61234413-61234432 | MS.gene059586:intron | 30.0% |
! | TAACAGAACCCTAAAGTATT+TGG | - | chr6.4:61234523-61234542 | None:intergenic | 30.0% |
! | TCCAATAGTGTTGAACATAA+AGG | + | chr6.4:61234412-61234431 | MS.gene059586:intron | 30.0% |
! | TGAGCATATTTTTCATCTTG+AGG | - | chr6.4:61234750-61234769 | None:intergenic | 30.0% |
! | TGATAATTTAGAGTTTCGTC+GGG | + | chr6.4:61233439-61233458 | MS.gene059586:intron | 30.0% |
! | TTGAACATAAAGGGTGTATT+AGG | + | chr6.4:61234422-61234441 | MS.gene059586:intron | 30.0% |
!!! | ATAGTTTTGGCTACTTGTTT+TGG | + | chr6.4:61236245-61236264 | MS.gene059586:CDS | 30.0% |
!!! | CCTGTTATTTTCCAAACAAT+TGG | + | chr6.4:61235278-61235297 | MS.gene059586:CDS | 30.0% |
!!! | GTTTTGGAAGAATATTGTCA+AGG | + | chr6.4:61236616-61236635 | MS.gene059586:CDS | 30.0% |
!!! | TGTTTGAGAATCATTGGTTT+TGG | + | chr6.4:61236600-61236619 | MS.gene059586:CDS | 30.0% |
AAGCTATCCTATTGAGCTTA+TGG | - | chr6.4:61235989-61236008 | None:intergenic | 35.0% | |
AAGCTCAATAGGATAGCTTA+TGG | + | chr6.4:61235990-61236009 | MS.gene059586:intron | 35.0% | |
ACTACCTAAAATTTCCCCAA+GGG | - | chr6.4:61233326-61233345 | None:intergenic | 35.0% | |
AGAAGATTCCGTATTTAAGG+TGG | - | chr6.4:61236487-61236506 | None:intergenic | 35.0% | |
ATAAATAGTGTGTGACGCAA+TGG | - | chr6.4:61234376-61234395 | None:intergenic | 35.0% | |
ATCATTGGACGTATTCTTCT+TGG | + | chr6.4:61233845-61233864 | MS.gene059586:CDS | 35.0% | |
ATGTTGTTAACTGGAAGAGT+TGG | - | chr6.4:61234875-61234894 | None:intergenic | 35.0% | |
ATTGCACCAATGATGAATTG+AGG | - | chr6.4:61235203-61235222 | None:intergenic | 35.0% | |
ATTGTCAAGGACGAAAACAA+GGG | + | chr6.4:61236629-61236648 | MS.gene059586:CDS | 35.0% | |
CATTCATAAGCTATGAAGCA+CGG | + | chr6.4:61235785-61235804 | MS.gene059586:intron | 35.0% | |
CATTTGGGAAGAATTCAATG+AGG | - | chr6.4:61233598-61233617 | None:intergenic | 35.0% | |
CCCTTTATGTTCAACACTAT+TGG | - | chr6.4:61234416-61234435 | None:intergenic | 35.0% | |
GAGGTCTATTCTTTCTCAAA+AGG | - | chr6.4:61235184-61235203 | None:intergenic | 35.0% | |
GATGGAAAACAACTGTCATT+TGG | + | chr6.4:61236269-61236288 | MS.gene059586:CDS | 35.0% | |
GCAAGAAGATTCCGTATTTA+AGG | - | chr6.4:61236490-61236509 | None:intergenic | 35.0% | |
GCTAACTCGTGTTTACTTAA+AGG | - | chr6.4:61234318-61234337 | None:intergenic | 35.0% | |
GCTCTATTTGGATATGATCT+TGG | + | chr6.4:61233107-61233126 | MS.gene059586:CDS | 35.0% | |
TACTACCTAAAATTTCCCCA+AGG | - | chr6.4:61233327-61233346 | None:intergenic | 35.0% | |
TACTGAGAAAATTCACCCTT+GGG | + | chr6.4:61234932-61234951 | MS.gene059586:CDS | 35.0% | |
TATTGTCAAGGACGAAAACA+AGG | + | chr6.4:61236628-61236647 | MS.gene059586:CDS | 35.0% | |
TCACTTTGCCACCTTAAATA+CGG | + | chr6.4:61236476-61236495 | MS.gene059586:CDS | 35.0% | |
TCTAATGGAAAGAGTTCACT+AGG | - | chr6.4:61236377-61236396 | None:intergenic | 35.0% | |
TCTCAGTACCATAATTCACA+AGG | - | chr6.4:61234920-61234939 | None:intergenic | 35.0% | |
TTCAATGAGGAAATCATCCA+TGG | - | chr6.4:61233585-61233604 | None:intergenic | 35.0% | |
TTTGGCATATGGAAGATCTT+GGG | + | chr6.4:61236331-61236350 | MS.gene059586:CDS | 35.0% | |
! | AAATGCTAACTTGTGCCTTA+AGG | - | chr6.4:61235635-61235654 | None:intergenic | 35.0% |
! | CTCAAAAGGAGATTCTGAAA+TGG | - | chr6.4:61235170-61235189 | None:intergenic | 35.0% |
! | GCCATTTCTGAAAGATATAG+AGG | - | chr6.4:61234825-61234844 | None:intergenic | 35.0% |
! | GGTCTTACATGGGTTTTTAA+AGG | + | chr6.4:61234281-61234300 | MS.gene059586:intron | 35.0% |
! | GTAGTACTGGAAAAGATTAG+AGG | + | chr6.4:61235074-61235093 | MS.gene059586:CDS | 35.0% |
! | GTGTTCCTTTGGAAATTGAA+TGG | - | chr6.4:61233382-61233401 | None:intergenic | 35.0% |
! | TATTTCTTGATGATCACAGG+TGG | + | chr6.4:61233551-61233570 | MS.gene059586:intron | 35.0% |
! | TTATCAAGAGTGTGTTCCTT+TGG | - | chr6.4:61233393-61233412 | None:intergenic | 35.0% |
! | TTTTGGCATATGGAAGATCT+TGG | + | chr6.4:61236330-61236349 | MS.gene059586:CDS | 35.0% |
!! | ATTCTTCTTGGAGTTGGTAT+TGG | + | chr6.4:61233857-61233876 | MS.gene059586:CDS | 35.0% |
!! | TACTTTAGGGTTCTGTTAAC+CGG | + | chr6.4:61234525-61234544 | MS.gene059586:intron | 35.0% |
ACTGAGAAAATTCACCCTTG+GGG | + | chr6.4:61234933-61234952 | MS.gene059586:CDS | 40.0% | |
AGAAACACCAAACAGTCTTG+TGG | + | chr6.4:61235025-61235044 | MS.gene059586:CDS | 40.0% | |
AGGAGAGCTAGTATCTTAGT+TGG | + | chr6.4:61233761-61233780 | MS.gene059586:CDS | 40.0% | |
AGTAGACAAAGCAGCTCATA+AGG | - | chr6.4:61236532-61236551 | None:intergenic | 40.0% | |
AGTAGCCAAAACTATAGCTG+TGG | - | chr6.4:61236240-61236259 | None:intergenic | 40.0% | |
ATAAAGATGAGCCCTCTTGA+GGG | - | chr6.4:61233030-61233049 | None:intergenic | 40.0% | |
ATGGCACCAGCAAAAATTAG+AGG | + | chr6.4:61234840-61234859 | MS.gene059586:CDS | 40.0% | |
CAGAGCCAAATCCAATTGTT+TGG | - | chr6.4:61235292-61235311 | None:intergenic | 40.0% | |
CCAATGAACATGAATGTTGC+TGG | - | chr6.4:61234990-61235009 | None:intergenic | 40.0% | |
CCAGCAACATTCATGTTCAT+TGG | + | chr6.4:61234987-61235006 | MS.gene059586:CDS | 40.0% | |
CCAGCATTTCAACAACTAAC+TGG | + | chr6.4:61235230-61235249 | MS.gene059586:CDS | 40.0% | |
CCAGTTAGTTGTTGAAATGC+TGG | - | chr6.4:61235233-61235252 | None:intergenic | 40.0% | |
CTACCTAAAATTTCCCCAAG+GGG | - | chr6.4:61233325-61233344 | None:intergenic | 40.0% | |
CTTTGGTTGACAAGTTTGGT+AGG | + | chr6.4:61235378-61235397 | MS.gene059586:CDS | 40.0% | |
GCAACATTCATGTTCATTGG+AGG | + | chr6.4:61234990-61235009 | MS.gene059586:CDS | 40.0% | |
GCAGATGACCTTATCTCTAA+TGG | - | chr6.4:61236392-61236411 | None:intergenic | 40.0% | |
GCTTCCTCTCATACACATTT+GGG | - | chr6.4:61233613-61233632 | None:intergenic | 40.0% | |
GTACTGAGAAAATTCACCCT+TGG | + | chr6.4:61234931-61234950 | MS.gene059586:CDS | 40.0% | |
TAAGCTATGAAGCACGGATA+TGG | + | chr6.4:61235791-61235810 | MS.gene059586:intron | 40.0% | |
TACACTCATCTCAATGGCTT+TGG | + | chr6.4:61235361-61235380 | MS.gene059586:CDS | 40.0% | |
TCTTCCCAAATGTGTATGAG+AGG | + | chr6.4:61233606-61233625 | MS.gene059586:CDS | 40.0% | |
TCTTGCATTATTGGTGCACT+TGG | + | chr6.4:61233080-61233099 | MS.gene059586:CDS | 40.0% | |
TCTTGCTACACTCATCTCAA+TGG | + | chr6.4:61235355-61235374 | MS.gene059586:CDS | 40.0% | |
TGCTTCCTCTCATACACATT+TGG | - | chr6.4:61233614-61233633 | None:intergenic | 40.0% | |
TGGAACTGTTGCTAAACCTA+AGG | - | chr6.4:61234970-61234989 | None:intergenic | 40.0% | |
TTATTTCACATAAGGTGGGG+TGG | - | chr6.4:61234237-61234256 | None:intergenic | 40.0% | |
TTGGCATATGGAAGATCTTG+GGG | + | chr6.4:61236332-61236351 | MS.gene059586:CDS | 40.0% | |
TTGTCAAGGACGAAAACAAG+GGG | + | chr6.4:61236630-61236649 | MS.gene059586:CDS | 40.0% | |
! | ACTGCTCCTCTAATTTTTGC+TGG | - | chr6.4:61234849-61234868 | None:intergenic | 40.0% |
! | ATTGGAACTTGCTTGGTTTC+TGG | - | chr6.4:61236563-61236582 | None:intergenic | 40.0% |
! | CAAACAATTGGATTTGGCTC+TGG | + | chr6.4:61235290-61235309 | MS.gene059586:CDS | 40.0% |
! | CTCTTCAATTGGAACTTGCT+TGG | - | chr6.4:61236570-61236589 | None:intergenic | 40.0% |
! | GATTGCCACAGCTATAGTTT+TGG | + | chr6.4:61236232-61236251 | MS.gene059586:intron | 40.0% |
! | GGTTCTGTAAGCTTCTTTTG+TGG | + | chr6.4:61233782-61233801 | MS.gene059586:CDS | 40.0% |
! | TAGACTTGAAGCACCAAATG+TGG | - | chr6.4:61233726-61233745 | None:intergenic | 40.0% |
! | TGGTAGGAGAGCTTTCTTTT+TGG | + | chr6.4:61235394-61235413 | MS.gene059586:CDS | 40.0% |
!! | ACAAGACTGTTTGGTGTTTC+TGG | - | chr6.4:61235026-61235045 | None:intergenic | 40.0% |
!! | AGAGCTTTCTTTTTGGAAGC+TGG | + | chr6.4:61235401-61235420 | MS.gene059586:CDS | 40.0% |
!! | ATGGCTTTGGTTGACAAGTT+TGG | + | chr6.4:61235374-61235393 | MS.gene059586:CDS | 40.0% |
!! | CTTGGAGTTGGTATTGGATT+TGG | + | chr6.4:61233863-61233882 | MS.gene059586:CDS | 40.0% |
!! | GCTTCTTAACTTGTGCCTTA+AGG | + | chr6.4:61235617-61235636 | MS.gene059586:intron | 40.0% |
!! | GGATATGATCTTGGTGTTTC+AGG | + | chr6.4:61233116-61233135 | MS.gene059586:CDS | 40.0% |
!!! | TTGGCTACTTGTTTTGGAGA+TGG | + | chr6.4:61236251-61236270 | MS.gene059586:CDS | 40.0% |
AAGGAAGAATTGTGCGACGA+TGG | - | chr6.4:61236453-61236472 | None:intergenic | 45.0% | |
AGAAAATTCACCCTTGGGGA+TGG | + | chr6.4:61234937-61234956 | MS.gene059586:CDS | 45.0% | |
ATGAAGCACGGATATGGACA+CGG | + | chr6.4:61235797-61235816 | MS.gene059586:intron | 45.0% | |
CATAAAGATGAGCCCTCTTG+AGG | - | chr6.4:61233031-61233050 | None:intergenic | 45.0% | |
CCTTGTTCCACAAGACTGTT+TGG | - | chr6.4:61235035-61235054 | None:intergenic | 45.0% | |
GGACGTATTCTTCTTGGAGT+TGG | + | chr6.4:61233851-61233870 | MS.gene059586:CDS | 45.0% | |
TAAGGTGGCAAAGTGACACA+AGG | - | chr6.4:61236472-61236491 | None:intergenic | 45.0% | |
TGCATTATTGGTGCACTTGG+TGG | + | chr6.4:61233083-61233102 | MS.gene059586:CDS | 45.0% | |
TGCTTCCTTAATTAGTGCCC+CGG | + | chr6.4:61234663-61234682 | MS.gene059586:intron | 45.0% | |
! | CATGCTAACTCGTGTCGTTA+GGG | + | chr6.4:61235479-61235498 | MS.gene059586:intron | 45.0% |
! | CCAAACAGTCTTGTGGAACA+AGG | + | chr6.4:61235032-61235051 | MS.gene059586:CDS | 45.0% |
! | CTACTCTTCCTTCGTCGATT+CGG | - | chr6.4:61235058-61235077 | None:intergenic | 45.0% |
! | GAACCCCTTGGGGAAATTTT+AGG | + | chr6.4:61233319-61233338 | MS.gene059586:intron | 45.0% |
! | TCATGCTAACTCGTGTCGTT+AGG | + | chr6.4:61235478-61235497 | MS.gene059586:intron | 45.0% |
!! | CTTGCTTGGTTTCTGGCAAT+AGG | - | chr6.4:61236556-61236575 | None:intergenic | 45.0% |
!! | GTCATCTGCACAAAGTGTTG+TGG | + | chr6.4:61236403-61236422 | MS.gene059586:CDS | 45.0% |
!! | TATAAATTAAAATGTAAATT+TGG | + | chr6.4:61234190-61234209 | MS.gene059586:intron | 5.0% |
AAAATGCTAACCAGTGCCCC+CGG | - | chr6.4:61234685-61234704 | None:intergenic | 50.0% | |
AAATTCACCCTTGGGGATGG+AGG | + | chr6.4:61234940-61234959 | MS.gene059586:CDS | 50.0% | |
ACTAGGAACCAACCACCCTA+AGG | - | chr6.4:61236360-61236379 | None:intergenic | 50.0% | |
AGATGGTAGCACCCTCAAGA+GGG | + | chr6.4:61233016-61233035 | MS.gene059586:CDS | 50.0% | |
AGATTCCTTAACCAGTGCCC+TGG | - | chr6.4:61234556-61234575 | None:intergenic | 50.0% | |
ATTCCTTAACCAGTGCCCTG+GGG | - | chr6.4:61234554-61234573 | None:intergenic | 50.0% | |
CCAAGGGGTTCACTTGAAAG+GGG | - | chr6.4:61233310-61233329 | None:intergenic | 50.0% | |
CCCAAGGGGTTCACTTGAAA+GGG | - | chr6.4:61233311-61233330 | None:intergenic | 50.0% | |
CGACGAAGGAAGAGTAGTAC+TGG | + | chr6.4:61235061-61235080 | MS.gene059586:CDS | 50.0% | |
CTAGGAACCAACCACCCTAA+GGG | - | chr6.4:61236359-61236378 | None:intergenic | 50.0% | |
CTTCCTTAATTAGTGCCCCG+GGG | + | chr6.4:61234665-61234684 | MS.gene059586:intron | 50.0% | |
GAAGATCTTGGGGTCCCTTA+GGG | + | chr6.4:61236342-61236361 | MS.gene059586:CDS | 50.0% | |
GATTCCTTAACCAGTGCCCT+GGG | - | chr6.4:61234555-61234574 | None:intergenic | 50.0% | |
GCTGCTCTTGTGTCCACATT+TGG | + | chr6.4:61233710-61233729 | MS.gene059586:CDS | 50.0% | |
GCTTCCTTAATTAGTGCCCC+GGG | + | chr6.4:61234664-61234683 | MS.gene059586:intron | 50.0% | |
TATGAAGCACGGACACTCCT+CGG | - | chr6.4:61235940-61235959 | None:intergenic | 50.0% | |
TTCCTTAATTAGTGCCCCGG+GGG | + | chr6.4:61234666-61234685 | MS.gene059586:intron | 50.0% | |
! | CCCTTTCAAGTGAACCCCTT+GGG | + | chr6.4:61233308-61233327 | MS.gene059586:intron | 50.0% |
! | CCTTTCAAGTGAACCCCTTG+GGG | + | chr6.4:61233309-61233328 | MS.gene059586:intron | 50.0% |
!! | CACAGGTGGTGTTACTTCCA+TGG | + | chr6.4:61233565-61233584 | MS.gene059586:intron | 50.0% |
!! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr6.4:61235894-61235913 | MS.gene059586:intron | 50.0% |
AAATGCTAACCAGTGCCCCC+GGG | - | chr6.4:61234684-61234703 | None:intergenic | 55.0% | |
AAGGATAGCCTCCATCCCCA+AGG | - | chr6.4:61234951-61234970 | None:intergenic | 55.0% | |
ACGGATATGGACACGGACAC+CGG | + | chr6.4:61235804-61235823 | MS.gene059586:intron | 55.0% | |
AGGATAGCCTCCATCCCCAA+GGG | - | chr6.4:61234950-61234969 | None:intergenic | 55.0% | |
CAGATGGTAGCACCCTCAAG+AGG | + | chr6.4:61233015-61233034 | MS.gene059586:CDS | 55.0% | |
CATAAGGTGGGGTGGTCTGA+TGG | - | chr6.4:61234229-61234248 | None:intergenic | 55.0% | |
CCCCAAGGGGTTCACTTGAA+AGG | - | chr6.4:61233312-61233331 | None:intergenic | 55.0% | |
GAACAAGGCCGAATCGACGA+AGG | + | chr6.4:61235047-61235066 | MS.gene059586:CDS | 55.0% | |
GGAAGATCTTGGGGTCCCTT+AGG | + | chr6.4:61236341-61236360 | MS.gene059586:CDS | 55.0% | |
TGGGGATGGAGGCTATCCTT+AGG | + | chr6.4:61234951-61234970 | MS.gene059586:CDS | 55.0% | |
TTCCTTAACCAGTGCCCTGG+GGG | - | chr6.4:61234553-61234572 | None:intergenic | 55.0% | |
! | CCCCTTTCAAGTGAACCCCT+TGG | + | chr6.4:61233307-61233326 | MS.gene059586:intron | 55.0% |
! | GCAGGTGGAGCATTTGCAGA+TGG | + | chr6.4:61232999-61233018 | MS.gene059586:CDS | 55.0% |
!! | GCACTTGGTGGCGCTCTATT+TGG | + | chr6.4:61233095-61233114 | MS.gene059586:CDS | 55.0% |
AATGCTAACCAGTGCCCCCG+GGG | - | chr6.4:61234683-61234702 | None:intergenic | 60.0% | |
GATCTTGGGGTCCCTTAGGG+TGG | + | chr6.4:61236345-61236364 | MS.gene059586:CDS | 60.0% | |
GCACGGACACTCCTCGGATT+AGG | - | chr6.4:61235934-61235953 | None:intergenic | 60.0% | |
GTCAGTGTCCGTGTCGTGTC+CGG | - | chr6.4:61235826-61235845 | None:intergenic | 60.0% | |
TCTGTTAACCGGTGCCCCCA+GGG | + | chr6.4:61234536-61234555 | MS.gene059586:intron | 60.0% | |
TTCTGTTAACCGGTGCCCCC+AGG | + | chr6.4:61234535-61234554 | MS.gene059586:intron | 60.0% | |
TTGGGGTCCCTTAGGGTGGT+TGG | + | chr6.4:61236349-61236368 | MS.gene059586:CDS | 60.0% | |
! | TGCCCCCGGGGCACTAATTA+AGG | - | chr6.4:61234671-61234690 | None:intergenic | 60.0% |
CACGGACACCGGACACGACA+CGG | + | chr6.4:61235815-61235834 | MS.gene059586:intron | 65.0% | |
CGTGGGACACGCCTAATCCG+AGG | + | chr6.4:61235920-61235939 | MS.gene059586:intron | 65.0% | |
! | AATTAGTGCCCCGGGGGCAC+TGG | + | chr6.4:61234672-61234691 | MS.gene059586:intron | 65.0% |
!! | CGGTGTCGTGTCGGACACGT+GGG | + | chr6.4:61235903-61235922 | MS.gene059586:intron | 65.0% |
!! | TCGGTGTCGTGTCGGACACG+TGG | + | chr6.4:61235902-61235921 | MS.gene059586:intron | 65.0% |
!! | TGCCCCCAGGGCACTGGTTA+AGG | + | chr6.4:61234548-61234567 | MS.gene059586:intron | 65.0% |
! | AACCAGTGCCCTGGGGGCAC+CGG | - | chr6.4:61234547-61234566 | None:intergenic | 70.0% |
AACCGGTGCCCCCAGGGCAC+TGG | + | chr6.4:61234542-61234561 | MS.gene059586:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 61232996 | 61236670 | 61232996 | ID=MS.gene059586 |
chr6.4 | mRNA | 61232996 | 61236670 | 61232996 | ID=MS.gene059586.t1;Parent=MS.gene059586 |
chr6.4 | exon | 61232996 | 61233137 | 61232996 | ID=MS.gene059586.t1.exon1;Parent=MS.gene059586.t1 |
chr6.4 | CDS | 61232996 | 61233137 | 61232996 | ID=cds.MS.gene059586.t1;Parent=MS.gene059586.t1 |
chr6.4 | exon | 61233570 | 61233892 | 61233570 | ID=MS.gene059586.t1.exon2;Parent=MS.gene059586.t1 |
chr6.4 | CDS | 61233570 | 61233892 | 61233570 | ID=cds.MS.gene059586.t1;Parent=MS.gene059586.t1 |
chr6.4 | exon | 61234816 | 61235445 | 61234816 | ID=MS.gene059586.t1.exon3;Parent=MS.gene059586.t1 |
chr6.4 | CDS | 61234816 | 61235445 | 61234816 | ID=cds.MS.gene059586.t1;Parent=MS.gene059586.t1 |
chr6.4 | exon | 61236233 | 61236670 | 61236233 | ID=MS.gene059586.t1.exon4;Parent=MS.gene059586.t1 |
chr6.4 | CDS | 61236233 | 61236670 | 61236233 | ID=cds.MS.gene059586.t1;Parent=MS.gene059586.t1 |
Gene Sequence |
Protein sequence |