Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059853.t1 | XP_013464730.1 | 87.5 | 280 | 35 | 0 | 6 | 285 | 110 | 389 | 6.10E-124 | 453.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059853.t1 | Q84WQ5 | 49.0 | 286 | 131 | 5 | 6 | 283 | 110 | 388 | 1.3e-61 | 238.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059853.t1 | A0A072VKT6 | 87.5 | 280 | 35 | 0 | 6 | 285 | 110 | 389 | 4.4e-124 | 453.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052505 | MS.gene059853 | -0.803105 | 4.09E-49 | -1.69E-46 |
| MS.gene059853 | MS.gene27093 | -0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene059853 | MS.gene33769 | -0.809599 | 1.75E-50 | -1.69E-46 |
| MS.gene059853 | MS.gene44439 | -0.800153 | 1.65E-48 | -1.69E-46 |
| MS.gene059853 | MS.gene49979 | -0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene059853 | MS.gene53849 | -0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene059853 | MS.gene54795 | -0.80124 | 9.89E-49 | -1.69E-46 |
| MS.gene059853 | MS.gene60176 | -0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene059853 | MS.gene73544 | -0.807448 | 5.03E-50 | -1.69E-46 |
| MS.gene059853 | MS.gene88958 | -0.800043 | 1.73E-48 | -1.69E-46 |
| MS.gene059853 | MS.gene91392 | -0.803058 | 4.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059853.t1 | MTR_2g079630 | 97.143 | 280 | 8 | 0 | 6 | 285 | 110 | 389 | 0.0 | 551 |
| MS.gene059853.t1 | MTR_2g079650 | 82.206 | 281 | 45 | 2 | 6 | 285 | 109 | 385 | 2.38e-155 | 439 |
| MS.gene059853.t1 | MTR_2g013110 | 47.350 | 283 | 130 | 4 | 6 | 283 | 125 | 393 | 2.08e-77 | 241 |
| MS.gene059853.t1 | MTR_7g079680 | 29.936 | 314 | 146 | 13 | 5 | 275 | 114 | 396 | 7.21e-21 | 92.0 |
| MS.gene059853.t1 | MTR_7g079680 | 31.707 | 246 | 117 | 10 | 51 | 275 | 61 | 276 | 5.16e-19 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059853.t1 | AT4G27460 | 53.147 | 286 | 119 | 6 | 6 | 283 | 110 | 388 | 1.64e-82 | 253 |
| MS.gene059853.t1 | AT5G53750 | 48.667 | 300 | 123 | 8 | 6 | 283 | 115 | 405 | 4.98e-70 | 222 |
| MS.gene059853.t1 | AT1G65320 | 27.302 | 315 | 153 | 11 | 5 | 275 | 117 | 399 | 2.33e-17 | 82.0 |
Find 77 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGATGATACAGCTTAT+TGG | 0.263301 | 2.2:+15643550 | MS.gene059853:intron |
| AAGGTTGAAGGAAAAGAATT+TGG | 0.316598 | 2.2:+15644063 | MS.gene059853:CDS |
| CGATGACCTTGCATACTTTC+CGG | 0.330667 | 2.2:-15644188 | None:intergenic |
| CACAGCAATCAAAGAGCTCT+TGG | 0.367612 | 2.2:-15644260 | None:intergenic |
| GAGGATGATTGGAGTTTAGT+TGG | 0.388830 | 2.2:+15644328 | MS.gene059853:CDS |
| GCCCTCCAGAGGATCTAGTT+AGG | 0.395318 | 2.2:+15644029 | MS.gene059853:CDS |
| TGTGGGTTATTGAGGATGAT+TGG | 0.421114 | 2.2:+15644317 | MS.gene059853:CDS |
| GCCATCACAACTTTGTCTGC+AGG | 0.430978 | 2.2:+15643977 | MS.gene059853:CDS |
| CTTCAACAGCAGAAGATGCC+TGG | 0.431407 | 2.2:-15643838 | None:intergenic |
| AGGTTCTTGCTTGGTTCCAT+TGG | 0.451234 | 2.2:+15643734 | MS.gene059853:CDS |
| CTCCATTGATTACTCTTCCC+AGG | 0.458539 | 2.2:+15643820 | MS.gene059853:CDS |
| TAATAGAGTGAATTACTTGT+GGG | 0.472091 | 2.2:+15644300 | MS.gene059853:CDS |
| GGTTGTAAAGGCAAGGTTGA+AGG | 0.477069 | 2.2:+15644051 | MS.gene059853:CDS |
| GCCATTGATCTCATACTTGA+GGG | 0.480304 | 2.2:+15643575 | MS.gene059853:CDS |
| CGAATTGATTGACATGGAAA+GGG | 0.483775 | 2.2:+15643414 | None:intergenic |
| GAATTACTTGTGGGTTATTG+AGG | 0.486011 | 2.2:+15644309 | MS.gene059853:CDS |
| GATGTGATCAGGTTCTTGCT+TGG | 0.488754 | 2.2:+15643725 | MS.gene059853:CDS |
| GCGAGGAGTTTGACACGGTC+CGG | 0.494146 | 2.2:+15644169 | MS.gene059853:CDS |
| TTCATCTGATGAGGACAGTC+CGG | 0.496147 | 2.2:+15644147 | MS.gene059853:CDS |
| CCGAATTGATTGACATGGAA+AGG | 0.498180 | 2.2:+15643413 | None:intergenic |
| CCCTCCAGAGGATCTAGTTA+GGG | 0.498391 | 2.2:+15644030 | MS.gene059853:CDS |
| AGACGATCGATGGATTGTGC+AGG | 0.510025 | 2.2:-15643773 | None:intergenic |
| TGCAAGGTCATCGAGCTACT+CGG | 0.516553 | 2.2:+15644198 | MS.gene059853:CDS |
| GTTGCAATTGTCGACGGTGA+TGG | 0.521762 | 2.2:+15643893 | MS.gene059853:CDS |
| GGATCTAGTTAGGGTTGTAA+AGG | 0.524022 | 2.2:+15644039 | MS.gene059853:CDS |
| CCATCACAACTTTGTCTGCA+GGG | 0.524200 | 2.2:+15643978 | MS.gene059853:CDS |
| ACAGCAATCAAAGAGCTCTT+GGG | 0.525945 | 2.2:-15644259 | None:intergenic |
| TTGTGTGAGGGACTTTGAGA+TGG | 0.531894 | 2.2:-15643861 | None:intergenic |
| CCCCTCAAGTATGAGATCAA+TGG | 0.534194 | 2.2:-15643576 | None:intergenic |
| CTAATAGAGTGAATTACTTG+TGG | 0.535417 | 2.2:+15644299 | MS.gene059853:CDS |
| ACAACCCTAACTAGATCCTC+TGG | 0.535562 | 2.2:-15644034 | None:intergenic |
| TGCCATTGATCTCATACTTG+AGG | 0.539564 | 2.2:+15643574 | MS.gene059853:CDS |
| GCAAGGTCATCGAGCTACTC+GGG | 0.541443 | 2.2:+15644199 | MS.gene059853:CDS |
| TTCAACAGCAGAAGATGCCT+GGG | 0.542048 | 2.2:-15643837 | None:intergenic |
| TTGCAATTGTCGACGGTGAT+GGG | 0.542443 | 2.2:+15643894 | MS.gene059853:CDS |
| GACGGTGATGGGACATTCAT+CGG | 0.542508 | 2.2:+15643905 | MS.gene059853:CDS |
| CCCTGCAGACAAAGTTGTGA+TGG | 0.549793 | 2.2:-15643978 | None:intergenic |
| CATCACAACTTTGTCTGCAG+GGG | 0.550293 | 2.2:+15643979 | MS.gene059853:CDS |
| TAACACAAGAGGATGTGATC+AGG | 0.550433 | 2.2:+15643714 | MS.gene059853:CDS |
| GATAATATTGAGACGATCGA+TGG | 0.553025 | 2.2:-15643783 | None:intergenic |
| GAGTGCACTGAAGCGGCCAA+TGG | 0.559548 | 2.2:-15643750 | None:intergenic |
| ACAACGGTGTTGAGTTCTGT+TGG | 0.560590 | 2.2:+15643690 | MS.gene059853:CDS |
| ATCACAACATGCAAGTGTGA+AGG | 0.567692 | 2.2:-15643939 | None:intergenic |
| TAGTTAGGGTTGTAAAGGCA+AGG | 0.569328 | 2.2:+15644044 | MS.gene059853:CDS |
| CAACAGAAGTTTGTTGTGTG+AGG | 0.577183 | 2.2:-15643874 | None:intergenic |
| ATCCTCCTCTTCATCTGATG+AGG | 0.578040 | 2.2:+15644138 | MS.gene059853:CDS |
| GACCGTGTCAAACTCCTCGC+CGG | 0.578167 | 2.2:-15644166 | None:intergenic |
| TGCCTGGGAAGAGTAATCAA+TGG | 0.580600 | 2.2:-15643822 | None:intergenic |
| ATCACAACTTTGTCTGCAGG+GGG | 0.584206 | 2.2:+15643980 | MS.gene059853:CDS |
| GTTCTGTTGGTTAACACAAG+AGG | 0.588395 | 2.2:+15643703 | MS.gene059853:CDS |
| GTGCAGGGAGTGCACTGAAG+CGG | 0.593463 | 2.2:-15643757 | None:intergenic |
| GTCCTCATCAGATGAAGAGG+AGG | 0.596841 | 2.2:-15644140 | None:intergenic |
| TCACAACATGCAAGTGTGAA+GGG | 0.596883 | 2.2:-15643938 | None:intergenic |
| ACTGTCCTCATCAGATGAAG+AGG | 0.604105 | 2.2:-15644143 | None:intergenic |
| GACGATCGATGGATTGTGCA+GGG | 0.604203 | 2.2:-15643772 | None:intergenic |
| TGCAGACAAAGTTGTGATGG+CGG | 0.609998 | 2.2:-15643975 | None:intergenic |
| AACAGAAGTTTGTTGTGTGA+GGG | 0.614439 | 2.2:-15643873 | None:intergenic |
| CACGGTCCGGAAAGTATGCA+AGG | 0.614793 | 2.2:+15644182 | MS.gene059853:CDS |
| AGGGCGACCACAGTCAATGT+AGG | 0.615124 | 2.2:-15644011 | None:intergenic |
| TGACTGTGGTCGCCCTCCAG+AGG | 0.619657 | 2.2:+15644018 | MS.gene059853:CDS |
| ATGTTGTGATGAGACGGTTG+CGG | 0.621625 | 2.2:+15643952 | MS.gene059853:CDS |
| ACTTCTGTTGCAATTGTCGA+CGG | 0.622534 | 2.2:+15643887 | MS.gene059853:CDS |
| AACAGAACTCAACACCGTTG+TGG | 0.629524 | 2.2:-15643688 | None:intergenic |
| GCTACTCGGGCAAGTATGTG+AGG | 0.642862 | 2.2:+15644212 | MS.gene059853:CDS |
| TGATTGACATGGAAAGGGGA+CGG | 0.643465 | 2.2:+15643419 | None:intergenic |
| ACCCTAACTAGATCCTCTGG+AGG | 0.646675 | 2.2:-15644031 | None:intergenic |
| AGAGGAGGATGACATATCAC+CGG | 0.649223 | 2.2:-15644125 | None:intergenic |
| GAATTGATTGACATGGAAAG+GGG | 0.650322 | 2.2:+15643415 | None:intergenic |
| CATTGATCTCATACTTGAGG+GGG | 0.653452 | 2.2:+15643577 | MS.gene059853:CDS |
| CAAGTATGTGAGGAATGTAG+AGG | 0.658949 | 2.2:+15644222 | MS.gene059853:CDS |
| ACTTGCATGTTGTGATGAGA+CGG | 0.665678 | 2.2:+15643946 | MS.gene059853:CDS |
| CCATTGATCTCATACTTGAG+GGG | 0.673886 | 2.2:+15643576 | MS.gene059853:CDS |
| CCCTAACTAGATCCTCTGGA+GGG | 0.680964 | 2.2:-15644030 | None:intergenic |
| TTGATGGCCTACATTGACTG+TGG | 0.683351 | 2.2:+15644004 | MS.gene059853:CDS |
| GTCCGGCGAGGAGTTTGACA+CGG | 0.708960 | 2.2:+15644164 | MS.gene059853:CDS |
| TTAACAATCAACAGCCACAA+CGG | 0.709558 | 2.2:+15643674 | MS.gene059853:CDS |
| CTGATGAGGACAGTCCGGCG+AGG | 0.730013 | 2.2:+15644152 | MS.gene059853:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTTCTAATATCTTGA+AGG | + | chr2.2:15644357-15644376 | MS.gene059853:CDS | 20.0% |
| ! | TAATAGAGTGAATTACTTGT+GGG | + | chr2.2:15644300-15644319 | MS.gene059853:CDS | 25.0% |
| !! | AATTTGATGATACAGCTTAT+TGG | + | chr2.2:15643550-15643569 | MS.gene059853:intron | 25.0% |
| AAGGTTGAAGGAAAAGAATT+TGG | + | chr2.2:15644063-15644082 | MS.gene059853:CDS | 30.0% | |
| ATTTCGCAAACAAAAAAAGG+TGG | + | chr2.2:15643620-15643639 | MS.gene059853:CDS | 30.0% | |
| CATCAAATTAACAAGAAGCA+AGG | - | chr2.2:15643539-15643558 | None:intergenic | 30.0% | |
| CCAATTTCGCAAACAAAAAA+AGG | + | chr2.2:15643617-15643636 | MS.gene059853:CDS | 30.0% | |
| CTAATAGAGTGAATTACTTG+TGG | + | chr2.2:15644299-15644318 | MS.gene059853:CDS | 30.0% | |
| !!! | CCTTTTTTTGTTTGCGAAAT+TGG | - | chr2.2:15643620-15643639 | None:intergenic | 30.0% |
| CAAAAAAAGGTGGTCTTTCT+AGG | + | chr2.2:15643630-15643649 | MS.gene059853:CDS | 35.0% | |
| GATAATATTGAGACGATCGA+TGG | - | chr2.2:15643786-15643805 | None:intergenic | 35.0% | |
| TTAACAATCAACAGCCACAA+CGG | + | chr2.2:15643674-15643693 | MS.gene059853:CDS | 35.0% | |
| ! | GAATTACTTGTGGGTTATTG+AGG | + | chr2.2:15644309-15644328 | MS.gene059853:CDS | 35.0% |
| !! | AACAGAAGTTTGTTGTGTGA+GGG | - | chr2.2:15643876-15643895 | None:intergenic | 35.0% |
| ACAGCAATCAAAGAGCTCTT+GGG | - | chr2.2:15644262-15644281 | None:intergenic | 40.0% | |
| ACTTCTGTTGCAATTGTCGA+CGG | + | chr2.2:15643887-15643906 | MS.gene059853:CDS | 40.0% | |
| ACTTGCATGTTGTGATGAGA+CGG | + | chr2.2:15643946-15643965 | MS.gene059853:CDS | 40.0% | |
| ATCACAACATGCAAGTGTGA+AGG | - | chr2.2:15643942-15643961 | None:intergenic | 40.0% | |
| CAAGTATGTGAGGAATGTAG+AGG | + | chr2.2:15644222-15644241 | MS.gene059853:CDS | 40.0% | |
| CATTGATCTCATACTTGAGG+GGG | + | chr2.2:15643577-15643596 | MS.gene059853:CDS | 40.0% | |
| CCATTGATCTCATACTTGAG+GGG | + | chr2.2:15643576-15643595 | MS.gene059853:CDS | 40.0% | |
| GAGGATGATTGGAGTTTAGT+TGG | + | chr2.2:15644328-15644347 | MS.gene059853:CDS | 40.0% | |
| GCCATTGATCTCATACTTGA+GGG | + | chr2.2:15643575-15643594 | MS.gene059853:CDS | 40.0% | |
| GGATCTAGTTAGGGTTGTAA+AGG | + | chr2.2:15644039-15644058 | MS.gene059853:CDS | 40.0% | |
| TAACACAAGAGGATGTGATC+AGG | + | chr2.2:15643714-15643733 | MS.gene059853:CDS | 40.0% | |
| TAGTTAGGGTTGTAAAGGCA+AGG | + | chr2.2:15644044-15644063 | MS.gene059853:CDS | 40.0% | |
| TCACAACATGCAAGTGTGAA+GGG | - | chr2.2:15643941-15643960 | None:intergenic | 40.0% | |
| TGCCATTGATCTCATACTTG+AGG | + | chr2.2:15643574-15643593 | MS.gene059853:CDS | 40.0% | |
| ! | GTTCTGTTGGTTAACACAAG+AGG | + | chr2.2:15643703-15643722 | MS.gene059853:CDS | 40.0% |
| ! | TGTGGGTTATTGAGGATGAT+TGG | + | chr2.2:15644317-15644336 | MS.gene059853:CDS | 40.0% |
| !! | CAACAGAAGTTTGTTGTGTG+AGG | - | chr2.2:15643877-15643896 | None:intergenic | 40.0% |
| !!! | ACGCTTTTGACTTCTTTGAC+CGG | + | chr2.2:15644106-15644125 | MS.gene059853:CDS | 40.0% |
| AACAGAACTCAACACCGTTG+TGG | - | chr2.2:15643691-15643710 | None:intergenic | 45.0% | |
| ACAACCCTAACTAGATCCTC+TGG | - | chr2.2:15644037-15644056 | None:intergenic | 45.0% | |
| ACTGTCCTCATCAGATGAAG+AGG | - | chr2.2:15644146-15644165 | None:intergenic | 45.0% | |
| AGAGGAGGATGACATATCAC+CGG | - | chr2.2:15644128-15644147 | None:intergenic | 45.0% | |
| AGGTTCTTGCTTGGTTCCAT+TGG | + | chr2.2:15643734-15643753 | MS.gene059853:CDS | 45.0% | |
| ATCACAACTTTGTCTGCAGG+GGG | + | chr2.2:15643980-15643999 | MS.gene059853:CDS | 45.0% | |
| ATCCTCCTCTTCATCTGATG+AGG | + | chr2.2:15644138-15644157 | MS.gene059853:CDS | 45.0% | |
| ATGTTGTGATGAGACGGTTG+CGG | + | chr2.2:15643952-15643971 | MS.gene059853:CDS | 45.0% | |
| CACAGCAATCAAAGAGCTCT+TGG | - | chr2.2:15644263-15644282 | None:intergenic | 45.0% | |
| CATCACAACTTTGTCTGCAG+GGG | + | chr2.2:15643979-15643998 | MS.gene059853:CDS | 45.0% | |
| CCATCACAACTTTGTCTGCA+GGG | + | chr2.2:15643978-15643997 | MS.gene059853:CDS | 45.0% | |
| CCCCTCAAGTATGAGATCAA+TGG | - | chr2.2:15643579-15643598 | None:intergenic | 45.0% | |
| CGATGACCTTGCATACTTTC+CGG | - | chr2.2:15644191-15644210 | None:intergenic | 45.0% | |
| GATGTGATCAGGTTCTTGCT+TGG | + | chr2.2:15643725-15643744 | MS.gene059853:CDS | 45.0% | |
| GGTTGTAAAGGCAAGGTTGA+AGG | + | chr2.2:15644051-15644070 | MS.gene059853:CDS | 45.0% | |
| TGCAGACAAAGTTGTGATGG+CGG | - | chr2.2:15643978-15643997 | None:intergenic | 45.0% | |
| TGCCTGGGAAGAGTAATCAA+TGG | - | chr2.2:15643825-15643844 | None:intergenic | 45.0% | |
| TTCAACAGCAGAAGATGCCT+GGG | - | chr2.2:15643840-15643859 | None:intergenic | 45.0% | |
| TTCATCTGATGAGGACAGTC+CGG | + | chr2.2:15644147-15644166 | MS.gene059853:CDS | 45.0% | |
| TTGCAATTGTCGACGGTGAT+GGG | + | chr2.2:15643894-15643913 | MS.gene059853:CDS | 45.0% | |
| ! | ACAACGGTGTTGAGTTCTGT+TGG | + | chr2.2:15643690-15643709 | MS.gene059853:CDS | 45.0% |
| ! | CTCCATTGATTACTCTTCCC+AGG | + | chr2.2:15643820-15643839 | MS.gene059853:CDS | 45.0% |
| ! | TTGATGGCCTACATTGACTG+TGG | + | chr2.2:15644004-15644023 | MS.gene059853:CDS | 45.0% |
| ! | TTGTGTGAGGGACTTTGAGA+TGG | - | chr2.2:15643864-15643883 | None:intergenic | 45.0% |
| ACCCTAACTAGATCCTCTGG+AGG | - | chr2.2:15644034-15644053 | None:intergenic | 50.0% | |
| CCCTAACTAGATCCTCTGGA+GGG | - | chr2.2:15644033-15644052 | None:intergenic | 50.0% | |
| CCCTCCAGAGGATCTAGTTA+GGG | + | chr2.2:15644030-15644049 | MS.gene059853:CDS | 50.0% | |
| CCCTGCAGACAAAGTTGTGA+TGG | - | chr2.2:15643981-15644000 | None:intergenic | 50.0% | |
| CTTCAACAGCAGAAGATGCC+TGG | - | chr2.2:15643841-15643860 | None:intergenic | 50.0% | |
| GCCATCACAACTTTGTCTGC+AGG | + | chr2.2:15643977-15643996 | MS.gene059853:CDS | 50.0% | |
| GTCCTCATCAGATGAAGAGG+AGG | - | chr2.2:15644143-15644162 | None:intergenic | 50.0% | |
| GTTGCAATTGTCGACGGTGA+TGG | + | chr2.2:15643893-15643912 | MS.gene059853:CDS | 50.0% | |
| TGCAAGGTCATCGAGCTACT+CGG | + | chr2.2:15644198-15644217 | MS.gene059853:CDS | 50.0% | |
| !! | AGACGATCGATGGATTGTGC+AGG | - | chr2.2:15643776-15643795 | None:intergenic | 50.0% |
| !! | GACGATCGATGGATTGTGCA+GGG | - | chr2.2:15643775-15643794 | None:intergenic | 50.0% |
| !! | GACGGTGATGGGACATTCAT+CGG | + | chr2.2:15643905-15643924 | MS.gene059853:CDS | 50.0% |
| AGGGCGACCACAGTCAATGT+AGG | - | chr2.2:15644014-15644033 | None:intergenic | 55.0% | |
| GCAAGGTCATCGAGCTACTC+GGG | + | chr2.2:15644199-15644218 | MS.gene059853:CDS | 55.0% | |
| GCCCTCCAGAGGATCTAGTT+AGG | + | chr2.2:15644029-15644048 | MS.gene059853:CDS | 55.0% | |
| GCTACTCGGGCAAGTATGTG+AGG | + | chr2.2:15644212-15644231 | MS.gene059853:CDS | 55.0% | |
| TTTGTCTGCAGGGGGCTTGA+TGG | + | chr2.2:15643988-15644007 | MS.gene059853:CDS | 55.0% | |
| ! | CACGGTCCGGAAAGTATGCA+AGG | + | chr2.2:15644182-15644201 | MS.gene059853:CDS | 55.0% |
| ! | TGAGGGGGCACAGAATCTTG+TGG | + | chr2.2:15643592-15643611 | MS.gene059853:CDS | 55.0% |
| GACCGTGTCAAACTCCTCGC+CGG | - | chr2.2:15644169-15644188 | None:intergenic | 60.0% | |
| GAGTGCACTGAAGCGGCCAA+TGG | - | chr2.2:15643753-15643772 | None:intergenic | 60.0% | |
| GCGAGGAGTTTGACACGGTC+CGG | + | chr2.2:15644169-15644188 | MS.gene059853:CDS | 60.0% | |
| GTCCGGCGAGGAGTTTGACA+CGG | + | chr2.2:15644164-15644183 | MS.gene059853:CDS | 60.0% | |
| ! | GTGCAGGGAGTGCACTGAAG+CGG | - | chr2.2:15643760-15643779 | None:intergenic | 60.0% |
| CTGATGAGGACAGTCCGGCG+AGG | + | chr2.2:15644152-15644171 | MS.gene059853:CDS | 65.0% | |
| TGACTGTGGTCGCCCTCCAG+AGG | + | chr2.2:15644018-15644037 | MS.gene059853:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 15643427 | 15644408 | 15643427 | ID=MS.gene059853 |
| chr2.2 | mRNA | 15643427 | 15644408 | 15643427 | ID=MS.gene059853.t1;Parent=MS.gene059853 |
| chr2.2 | exon | 15643427 | 15643440 | 15643427 | ID=MS.gene059853.t1.exon1;Parent=MS.gene059853.t1 |
| chr2.2 | CDS | 15643427 | 15643440 | 15643427 | ID=cds.MS.gene059853.t1;Parent=MS.gene059853.t1 |
| chr2.2 | exon | 15643565 | 15644408 | 15643565 | ID=MS.gene059853.t1.exon2;Parent=MS.gene059853.t1 |
| chr2.2 | CDS | 15643565 | 15644408 | 15643565 | ID=cds.MS.gene059853.t1;Parent=MS.gene059853.t1 |
| Gene Sequence |
| Protein sequence |