Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73544.t1 | KEH42024.1 | 79 | 272 | 20 | 3 | 1 | 272 | 99 | 333 | 2.40E-114 | 421.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73544.t1 | A0A072VJ17 | 79.0 | 272 | 20 | 3 | 1 | 272 | 99 | 333 | 1.8e-114 | 421.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene73544 | 0.82695 | 2.05E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene73544 | 0.892863 | 1.07E-74 | -1.69E-46 |
| MS.gene049222 | MS.gene73544 | 0.849896 | 2.41E-60 | -1.69E-46 |
| MS.gene049257 | MS.gene73544 | 0.828278 | 9.82E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene73544 | 0.842707 | 2.19E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene73544 | 0.829892 | 3.99E-55 | -1.69E-46 |
| MS.gene049373 | MS.gene73544 | 0.803956 | 2.72E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene73544 | 0.854886 | 9.13E-62 | -1.69E-46 |
| MS.gene049627 | MS.gene73544 | 0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene73544 | 0.853911 | 1.75E-61 | -1.69E-46 |
| MS.gene049805 | MS.gene73544 | 0.806466 | 8.11E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene73544 | 0.827579 | 1.45E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene73544 | 0.829416 | 5.21E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene73544 | 0.915061 | 9.21E-85 | -1.69E-46 |
| MS.gene050323 | MS.gene73544 | 0.845018 | 5.27E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene73544 | 0.85845 | 8.17E-63 | -1.69E-46 |
| MS.gene050504 | MS.gene73544 | 0.856432 | 3.23E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene73544 | 0.804212 | 2.41E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene73544 | 0.810119 | 1.35E-50 | -1.69E-46 |
| MS.gene050547 | MS.gene73544 | -0.803144 | 4.01E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene73544 | 0.876726 | 1.11E-68 | -1.69E-46 |
| MS.gene050593 | MS.gene73544 | 0.811714 | 6.10E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene73544 | 0.84429 | 8.28E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene73544 | 0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene73544 | 0.849254 | 3.64E-60 | -1.69E-46 |
| MS.gene050747 | MS.gene73544 | 0.865573 | 5.35E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene73544 | 0.85111 | 1.10E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene73544 | 0.852981 | 3.23E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene73544 | 0.882726 | 8.18E-71 | -1.69E-46 |
| MS.gene050868 | MS.gene73544 | 0.862876 | 3.71E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene73544 | 0.861439 | 1.03E-63 | -1.69E-46 |
| MS.gene050904 | MS.gene73544 | 0.863968 | 1.70E-64 | -1.69E-46 |
| MS.gene050950 | MS.gene73544 | 0.855514 | 5.99E-62 | -1.69E-46 |
| MS.gene050986 | MS.gene73544 | 0.832737 | 7.97E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene73544 | 0.809434 | 1.90E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene73544 | 0.823074 | 1.68E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene73544 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene73544 | 0.886652 | 2.84E-72 | -1.69E-46 |
| MS.gene051858 | MS.gene73544 | 0.810698 | 1.01E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene73544 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene051941 | MS.gene73544 | 0.845141 | 4.89E-59 | -1.69E-46 |
| MS.gene051973 | MS.gene73544 | -0.80385 | 2.86E-49 | -1.69E-46 |
| MS.gene052015 | MS.gene73544 | -0.803223 | 3.86E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene73544 | 0.877492 | 6.02E-69 | -1.69E-46 |
| MS.gene052346 | MS.gene73544 | 0.843495 | 1.35E-58 | -1.69E-46 |
| MS.gene052482 | MS.gene73544 | 0.853772 | 1.92E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene73544 | 0.859883 | 3.04E-63 | -1.69E-46 |
| MS.gene052494 | MS.gene73544 | -0.835651 | 1.48E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene73544 | 0.846861 | 1.66E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene73544 | 0.882112 | 1.37E-70 | -1.69E-46 |
| MS.gene052505 | MS.gene73544 | 0.83314 | 6.33E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene73544 | 0.834344 | 3.16E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene73544 | 0.850578 | 1.55E-60 | -1.69E-46 |
| MS.gene052820 | MS.gene73544 | 0.800921 | 1.15E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene73544 | 0.830089 | 3.57E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene73544 | 0.881607 | 2.09E-70 | -1.69E-46 |
| MS.gene052825 | MS.gene73544 | 0.881144 | 3.06E-70 | -1.69E-46 |
| MS.gene052870 | MS.gene73544 | 0.802166 | 6.38E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene73544 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene73544 | 0.850173 | 2.02E-60 | -1.69E-46 |
| MS.gene052982 | MS.gene73544 | 0.826047 | 3.36E-54 | -1.69E-46 |
| MS.gene053097 | MS.gene73544 | -0.813607 | 2.35E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene73544 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene73544 | 0.880075 | 7.40E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene73544 | 0.814817 | 1.27E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene73544 | 0.824018 | 1.01E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene73544 | 0.822271 | 2.59E-53 | -1.69E-46 |
| MS.gene053318 | MS.gene73544 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene73544 | -0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene73544 | 0.857746 | 1.32E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene73544 | 0.850124 | 2.08E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene73544 | 0.871245 | 7.92E-67 | -1.69E-46 |
| MS.gene053574 | MS.gene73544 | 0.854336 | 1.32E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene73544 | 0.839114 | 1.92E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene73544 | 0.825831 | 3.78E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene73544 | 0.881845 | 1.71E-70 | -1.69E-46 |
| MS.gene053997 | MS.gene73544 | 0.827517 | 1.50E-54 | -1.69E-46 |
| MS.gene054343 | MS.gene73544 | 0.82413 | 9.54E-54 | -1.69E-46 |
| MS.gene054344 | MS.gene73544 | 0.866321 | 3.10E-65 | -1.69E-46 |
| MS.gene054408 | MS.gene73544 | 0.858447 | 8.19E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene73544 | 0.840539 | 8.18E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene73544 | 0.834496 | 2.90E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene73544 | 0.80384 | 2.88E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene73544 | -0.813173 | 2.93E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene73544 | 0.892679 | 1.27E-74 | -1.69E-46 |
| MS.gene054851 | MS.gene73544 | -0.807633 | 4.60E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene73544 | -0.813906 | 2.02E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene73544 | 0.848026 | 7.97E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene73544 | 0.833374 | 5.53E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene73544 | 0.842451 | 2.57E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene73544 | 0.836962 | 6.88E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene73544 | 0.830647 | 2.61E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene73544 | 0.821077 | 4.89E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene73544 | 0.858707 | 6.85E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene73544 | 0.850237 | 1.93E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene73544 | 0.869092 | 4.01E-66 | -1.69E-46 |
| MS.gene055722 | MS.gene73544 | 0.814014 | 1.91E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene73544 | 0.82554 | 4.43E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene73544 | 0.815515 | 8.89E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene73544 | 0.859885 | 3.03E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene73544 | 0.847665 | 1.00E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene73544 | 0.8525 | 4.43E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene73544 | 0.908232 | 2.14E-81 | -1.69E-46 |
| MS.gene055941 | MS.gene73544 | 0.821218 | 4.54E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene73544 | 0.837343 | 5.50E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene73544 | 0.850272 | 1.89E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene73544 | 0.82184 | 3.26E-53 | -1.69E-46 |
| MS.gene056409 | MS.gene73544 | 0.833815 | 4.29E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene73544 | 0.884058 | 2.65E-71 | -1.69E-46 |
| MS.gene056510 | MS.gene73544 | 0.841072 | 5.93E-58 | -1.69E-46 |
| MS.gene056610 | MS.gene73544 | 0.850169 | 2.02E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene73544 | 0.817057 | 4.02E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene73544 | 0.847617 | 1.03E-59 | -1.69E-46 |
| MS.gene056877 | MS.gene73544 | 0.812283 | 4.58E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene73544 | 0.818752 | 1.66E-52 | -1.69E-46 |
| MS.gene056988 | MS.gene73544 | -0.801218 | 9.99E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene73544 | 0.823156 | 1.61E-53 | -1.69E-46 |
| MS.gene057048 | MS.gene73544 | 0.82484 | 6.49E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene73544 | 0.820261 | 7.53E-53 | -1.69E-46 |
| MS.gene057196 | MS.gene73544 | 0.809017 | 2.33E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene73544 | 0.826589 | 2.50E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene73544 | 0.812475 | 4.16E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene73544 | 0.86994 | 2.12E-66 | -1.69E-46 |
| MS.gene057831 | MS.gene73544 | 0.85703 | 2.15E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene73544 | 0.820092 | 8.23E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene73544 | 0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene73544 | 0.829215 | 5.83E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene73544 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene73544 | 0.849888 | 2.42E-60 | -1.69E-46 |
| MS.gene058334 | MS.gene73544 | -0.82594 | 3.56E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene73544 | 0.868713 | 5.32E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene73544 | 0.891751 | 2.98E-74 | -1.69E-46 |
| MS.gene058418 | MS.gene73544 | -0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene73544 | 0.856147 | 3.92E-62 | -1.69E-46 |
| MS.gene058444 | MS.gene73544 | 0.806158 | 9.42E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene73544 | 0.85306 | 3.07E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene73544 | 0.835829 | 1.34E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene73544 | 0.902094 | 1.38E-78 | -1.69E-46 |
| MS.gene059022 | MS.gene73544 | 0.863087 | 3.20E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene73544 | 0.908592 | 1.44E-81 | -1.69E-46 |
| MS.gene059103 | MS.gene73544 | -0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene05914 | MS.gene73544 | 0.834468 | 2.95E-56 | -1.69E-46 |
| MS.gene059303 | MS.gene73544 | 0.865456 | 5.83E-65 | -1.69E-46 |
| MS.gene059480 | MS.gene73544 | -0.812272 | 4.61E-51 | -1.69E-46 |
| MS.gene05960 | MS.gene73544 | -0.814282 | 1.67E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene73544 | 0.870146 | 1.82E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene73544 | 0.845019 | 5.27E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene73544 | 0.854961 | 8.68E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene73544 | 0.836923 | 7.04E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene73544 | 0.838459 | 2.84E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene73544 | 0.849147 | 3.90E-60 | -1.69E-46 |
| MS.gene059853 | MS.gene73544 | -0.807448 | 5.03E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene73544 | 0.837066 | 6.47E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene73544 | 0.806605 | 7.59E-50 | -1.69E-46 |
| MS.gene05995 | MS.gene73544 | 0.805049 | 1.61E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene73544 | 0.823717 | 1.19E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene73544 | 0.868977 | 4.37E-66 | -1.69E-46 |
| MS.gene06027 | MS.gene73544 | 0.837552 | 4.86E-57 | -1.69E-46 |
| MS.gene060485 | MS.gene73544 | 0.816991 | 4.16E-52 | -1.69E-46 |
| MS.gene060593 | MS.gene73544 | -0.815385 | 9.50E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene73544 | -0.829214 | 5.83E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene73544 | 0.854609 | 1.10E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene73544 | 0.862688 | 4.25E-64 | -1.69E-46 |
| MS.gene06077 | MS.gene73544 | 0.90143 | 2.70E-78 | -1.69E-46 |
| MS.gene060835 | MS.gene73544 | 0.803051 | 4.19E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene73544 | 0.85504 | 8.24E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene73544 | 0.873555 | 1.34E-67 | -1.69E-46 |
| MS.gene061044 | MS.gene73544 | -0.818059 | 2.39E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene73544 | 0.844759 | 6.20E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACCTTCGCACGAAAATT+TGG | 0.131482 | 1.4:+49000115 | None:intergenic |
| AGACGAAATAATTAAGTATT+TGG | 0.152096 | 1.4:-48999733 | MS.gene73544:CDS |
| CTCCGAAGCCACTTAAATTA+TGG | 0.160254 | 1.4:-48998908 | MS.gene73544:CDS |
| CTCTTTCTCATTTGTTTCTA+AGG | 0.160569 | 1.4:-49001406 | MS.gene73544:CDS |
| CGAAAATTTGGGCCGTTTCT+TGG | 0.207802 | 1.4:+49000127 | None:intergenic |
| ATCAATGATACAATTTATTC+AGG | 0.238759 | 1.4:-48998578 | MS.gene73544:CDS |
| TAGAGAAATAGTTGCTGTTT+TGG | 0.248195 | 1.4:-49000176 | MS.gene73544:CDS |
| GTCCATACCTTTCGACAAAA+TGG | 0.270523 | 1.4:+49000320 | None:intergenic |
| TGATATAGAATATTTCGTTT+TGG | 0.299080 | 1.4:+48998352 | None:intergenic |
| AAGTATTTGGTTGGAACATA+TGG | 0.302490 | 1.4:-48999720 | MS.gene73544:intron |
| CAACCTTCGCACGAAAATTT+GGG | 0.318898 | 1.4:+49000116 | None:intergenic |
| GAAAATTTGGGCCGTTTCTT+GGG | 0.320564 | 1.4:+49000128 | None:intergenic |
| TACATTGAAACGCCAGTGTT+TGG | 0.321278 | 1.4:+48999762 | None:intergenic |
| AATATTCTATATCAGAAAAC+TGG | 0.378479 | 1.4:-48998343 | MS.gene73544:CDS |
| TCAGAAAACTGGACATTTCC+AGG | 0.380253 | 1.4:-48998332 | MS.gene73544:intron |
| ACGCGAAGTACTTGTGGAAT+TGG | 0.388738 | 1.4:-48998534 | MS.gene73544:CDS |
| TCCGAAGCCACTTAAATTAT+GGG | 0.388850 | 1.4:-48998907 | MS.gene73544:CDS |
| ACATTGAAACGCCAGTGTTT+GGG | 0.402036 | 1.4:+48999763 | None:intergenic |
| TTCAAATTCATAGATCTCAA+TGG | 0.411901 | 1.4:+49000499 | None:intergenic |
| GCCCATAATTTAAGTGGCTT+CGG | 0.413395 | 1.4:+48998906 | None:intergenic |
| GAAATAATTAAGTATTTGGT+TGG | 0.416181 | 1.4:-48999729 | MS.gene73544:CDS |
| GGAGACAATCTTACCATGTA+AGG | 0.426269 | 1.4:+49000067 | None:intergenic |
| TAGATCTCAATGGGCTTCTC+TGG | 0.426617 | 1.4:+49000509 | None:intergenic |
| ATTCCTCTTACTTTATCGCT+TGG | 0.434103 | 1.4:-48999235 | MS.gene73544:CDS |
| TCAAATTCATAGATCTCAAT+GGG | 0.434170 | 1.4:+49000500 | None:intergenic |
| GTAAAAGAAACATCAAAGAT+AGG | 0.441714 | 1.4:-49000539 | MS.gene73544:CDS |
| TCATATGCCCATAATTTAAG+TGG | 0.444995 | 1.4:+48998900 | None:intergenic |
| TTCTATCCTTGCCCAAGAAA+CGG | 0.451827 | 1.4:-49000139 | MS.gene73544:CDS |
| AACATTTCTACACCAGTGTT+CGG | 0.452912 | 1.4:+48998187 | None:intergenic |
| AATCCAAGCGATAAAGTAAG+AGG | 0.457533 | 1.4:+48999232 | None:intergenic |
| CGTGCGAAGGTTGTTGAGAT+GGG | 0.462625 | 1.4:-49000106 | MS.gene73544:CDS |
| ACTTAAATTATGGGCATATG+AGG | 0.464685 | 1.4:-48998898 | MS.gene73544:intron |
| AAGTTTAAAAGCATATTCAT+TGG | 0.474316 | 1.4:+49001372 | None:intergenic |
| TCGTGCGAAGGTTGTTGAGA+TGG | 0.480686 | 1.4:-49000107 | MS.gene73544:CDS |
| TTTAAAAGCATATTCATTGG+TGG | 0.502105 | 1.4:+49001375 | None:intergenic |
| AATCGTACGCGAAGTACTTG+TGG | 0.503393 | 1.4:-48998540 | MS.gene73544:CDS |
| TAAAACACAGTTCCCTTACA+TGG | 0.513518 | 1.4:-49000080 | MS.gene73544:intron |
| TCAATGATACAATTTATTCA+GGG | 0.513896 | 1.4:-48998577 | MS.gene73544:CDS |
| GGCTTCGGAGGTAACTTCGC+TGG | 0.519884 | 1.4:+48998921 | None:intergenic |
| TGAGCATCAAAATAAAAGAA+TGG | 0.524411 | 1.4:+49001336 | None:intergenic |
| TTTGGGCCGTTTCTTGGGCA+AGG | 0.527655 | 1.4:+49000133 | None:intergenic |
| TTGAGATCTATGAATTTGAA+AGG | 0.546792 | 1.4:-49000496 | MS.gene73544:intron |
| AAGGATAGAAAAGAATATCA+AGG | 0.558191 | 1.4:+49000152 | None:intergenic |
| CATAATTTAAGTGGCTTCGG+AGG | 0.566075 | 1.4:+48998909 | None:intergenic |
| TTTCATTGTAGTTGTGCTAG+GGG | 0.574387 | 1.4:-48998379 | MS.gene73544:intron |
| ACTTACTTGACAAGCAAATG+TGG | 0.620078 | 1.4:+48998506 | None:intergenic |
| GAGACAATCTTACCATGTAA+GGG | 0.623184 | 1.4:+49000068 | None:intergenic |
| TATGCTTGGTCGCATTACAA+AGG | 0.624227 | 1.4:-48999091 | MS.gene73544:intron |
| TATTAGGTTGACCCAAACAC+TGG | 0.638176 | 1.4:-48999774 | MS.gene73544:intron |
| GCATCAAAATAAAAGAATGG+AGG | 0.676643 | 1.4:+49001339 | None:intergenic |
| GCGAAGGTTGTTGAGATGGG+TGG | 0.681372 | 1.4:-49000103 | MS.gene73544:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACAAATTGTATATAA+CGG | + | chr1.4:48998849-48998868 | None:intergenic | 10.0% |
| !! | TACAAAAAATAAATATTGAG+CGG | + | chr1.4:48999090-48999109 | None:intergenic | 15.0% |
| !! | TACACATTAATTTCAATATT+TGG | - | chr1.4:49000524-49000543 | MS.gene73544:CDS | 15.0% |
| !! | TATAACTTATAATCTAGTAA+TGG | + | chr1.4:49000732-49000751 | None:intergenic | 15.0% |
| !! | TCAAATAGTTATTAAATAAC+TGG | - | chr1.4:48998404-48998423 | MS.gene73544:intron | 15.0% |
| !!! | ATGTGTATATTTTCATAAAT+TGG | + | chr1.4:49001254-49001273 | None:intergenic | 15.0% |
| !!! | ATTAAGAAATAACAATTTTC+TGG | - | chr1.4:48999750-48999769 | MS.gene73544:CDS | 15.0% |
| !!! | GTAATTTTACATTAACAATA+TGG | - | chr1.4:48999107-48999126 | MS.gene73544:CDS | 15.0% |
| !! | AAAAATCAACAAAACAAAGT+TGG | - | chr1.4:48999507-48999526 | MS.gene73544:intron | 20.0% |
| !! | AAATGAAAAATGAAATACAG+AGG | + | chr1.4:48998932-48998951 | None:intergenic | 20.0% |
| !! | AATATTAAATAACCATCACA+AGG | + | chr1.4:48999719-48999738 | None:intergenic | 20.0% |
| !! | AATATTCTATATCAGAAAAC+TGG | - | chr1.4:49001204-49001223 | MS.gene73544:intron | 20.0% |
| !! | ACAAAAAATAAATATTGAGC+GGG | + | chr1.4:48999089-48999108 | None:intergenic | 20.0% |
| !! | ACATCTATTGTATGTTAATT+AGG | - | chr1.4:48998374-48998393 | MS.gene73544:intron | 20.0% |
| !! | ACTAAACTAAGAAATACATA+TGG | + | chr1.4:49001085-49001104 | None:intergenic | 20.0% |
| !! | AGACGAAATAATTAAGTATT+TGG | - | chr1.4:48999814-48999833 | MS.gene73544:intron | 20.0% |
| !! | ATCAATGATACAATTTATTC+AGG | - | chr1.4:49000969-49000988 | MS.gene73544:intron | 20.0% |
| !! | CTAGATTATAAGTTATAGAT+TGG | - | chr1.4:49000735-49000754 | MS.gene73544:intron | 20.0% |
| !! | CTATTCTTTAATCTTCATAA+TGG | + | chr1.4:48999150-48999169 | None:intergenic | 20.0% |
| !! | GAAATAATTAAGTATTTGGT+TGG | - | chr1.4:48999818-48999837 | MS.gene73544:intron | 20.0% |
| !! | TATAGCTAGTAATTTCATTT+GGG | + | chr1.4:48998686-48998705 | None:intergenic | 20.0% |
| !! | TCAATGATACAATTTATTCA+GGG | - | chr1.4:49000970-49000989 | MS.gene73544:intron | 20.0% |
| !! | TGTGATGGTTATTTAATATT+TGG | - | chr1.4:48999719-48999738 | MS.gene73544:intron | 20.0% |
| !!! | AAGTTTAAAAGCATATTCAT+TGG | + | chr1.4:48998178-48998197 | None:intergenic | 20.0% |
| !!! | AAGTTTTATAAGCTCTATTT+AGG | - | chr1.4:48999978-48999997 | MS.gene73544:intron | 20.0% |
| !!! | AATAACAATTTTCTGGTATT+AGG | - | chr1.4:48999757-48999776 | MS.gene73544:CDS | 20.0% |
| !!! | AATAACATGTGTTAGATTTT+AGG | - | chr1.4:48999910-48999929 | MS.gene73544:intron | 20.0% |
| !!! | ACTTTTTGTACTTATGTTAA+TGG | - | chr1.4:48998271-48998290 | MS.gene73544:intron | 20.0% |
| !!! | AGTTTCTTGTTATGATTTTT+TGG | - | chr1.4:48999531-48999550 | MS.gene73544:intron | 20.0% |
| !!! | ATTTCTTAGTTTAGTCTTAT+TGG | - | chr1.4:49001090-49001109 | MS.gene73544:intron | 20.0% |
| !!! | GATATAGAATATTTCGTTTT+GGG | + | chr1.4:49001197-49001216 | None:intergenic | 20.0% |
| !!! | GTTTCTTGTTATGATTTTTT+GGG | - | chr1.4:48999532-48999551 | MS.gene73544:intron | 20.0% |
| !!! | TCATTGTTTTTGAAATTTCA+GGG | - | chr1.4:49000590-49000609 | MS.gene73544:intron | 20.0% |
| !!! | TGATATAGAATATTTCGTTT+TGG | + | chr1.4:49001198-49001217 | None:intergenic | 20.0% |
| !!! | TTCATTGTTTTTGAAATTTC+AGG | - | chr1.4:49000589-49000608 | MS.gene73544:intron | 20.0% |
| !!! | TTGTTTTGTTGATTTTTTTG+AGG | + | chr1.4:48999504-48999523 | None:intergenic | 20.0% |
| ! | AAAGCACAAAGTGATTAAAA+TGG | + | chr1.4:48998716-48998735 | None:intergenic | 25.0% |
| ! | AAGGATAGAAAAGAATATCA+AGG | + | chr1.4:48999398-48999417 | None:intergenic | 25.0% |
| ! | ACTTATAATCTAGTAATGGT+TGG | + | chr1.4:49000728-49000747 | None:intergenic | 25.0% |
| ! | ATTACAAAGTGGTTATATCA+AGG | - | chr1.4:49000891-49000910 | MS.gene73544:intron | 25.0% |
| ! | ATTGGAATCAATAAAATACC+TGG | + | chr1.4:49001236-49001255 | None:intergenic | 25.0% |
| ! | ATTTGACATACTTGAAAACA+TGG | - | chr1.4:49000801-49000820 | MS.gene73544:intron | 25.0% |
| ! | CAAATGAAATTACTAGCTAT+AGG | - | chr1.4:48998685-48998704 | MS.gene73544:intron | 25.0% |
| ! | CTATAGCTAGTAATTTCATT+TGG | + | chr1.4:48998687-48998706 | None:intergenic | 25.0% |
| ! | GTAAAAGAAACATCAAAGAT+AGG | - | chr1.4:48999008-48999027 | MS.gene73544:intron | 25.0% |
| ! | TCAAATTCATAGATCTCAAT+GGG | + | chr1.4:48999050-48999069 | None:intergenic | 25.0% |
| ! | TGAGCATCAAAATAAAAGAA+TGG | + | chr1.4:48998214-48998233 | None:intergenic | 25.0% |
| ! | TTCAAATTCATAGATCTCAA+TGG | + | chr1.4:48999051-48999070 | None:intergenic | 25.0% |
| ! | TTCTTTAATAATGTTCTTCG+TGG | - | chr1.4:48999189-48999208 | MS.gene73544:intron | 25.0% |
| ! | TTGAGATCTATGAATTTGAA+AGG | - | chr1.4:48999051-48999070 | MS.gene73544:intron | 25.0% |
| !! | AGTATTTTACCACATACAAA+GGG | - | chr1.4:49000094-49000113 | MS.gene73544:CDS | 25.0% |
| !! | ATACTCAATTCTGAAAAGTA+TGG | + | chr1.4:49000079-49000098 | None:intergenic | 25.0% |
| !! | ATGTTAATGGATAGATTACT+AGG | - | chr1.4:48998284-48998303 | MS.gene73544:intron | 25.0% |
| !! | GAATATGCTTTTAAACTTTC+TGG | - | chr1.4:48998180-48998199 | MS.gene73544:CDS | 25.0% |
| !! | GTATTTTTCTCACAATGTTA+TGG | + | chr1.4:49000167-49000186 | None:intergenic | 25.0% |
| !! | GTTATATCAAGGCTTTTTAT+AGG | - | chr1.4:49000902-49000921 | MS.gene73544:intron | 25.0% |
| !! | TTAACAACTGTTGCTTATTA+TGG | - | chr1.4:48998480-48998499 | MS.gene73544:intron | 25.0% |
| !! | TTTAAAAGCATATTCATTGG+TGG | + | chr1.4:48998175-48998194 | None:intergenic | 25.0% |
| !! | TTTATCGCTTGGATTTTTAA+CGG | - | chr1.4:49000323-49000342 | MS.gene73544:intron | 25.0% |
| !!! | AGTAATTTCTAGAACCTATA+GGG | + | chr1.4:49000214-49000233 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTTATCACCAGAA+AGG | - | chr1.4:49000367-49000386 | MS.gene73544:intron | 25.0% |
| AAGTATTTGGTTGGAACATA+TGG | - | chr1.4:48999827-48999846 | MS.gene73544:intron | 30.0% | |
| AAGTTAATGCAAAAACTAGC+CGG | - | chr1.4:48999605-48999624 | MS.gene73544:intron | 30.0% | |
| ACTTAAATTATGGGCATATG+AGG | - | chr1.4:49000649-49000668 | MS.gene73544:intron | 30.0% | |
| ATGGATGATGTTAATTCTGA+TGG | - | chr1.4:49001306-49001325 | MS.gene73544:CDS | 30.0% | |
| ATGGATTCATAAACAACAAC+CGG | + | chr1.4:48999627-48999646 | None:intergenic | 30.0% | |
| CATGACATGGTACTTATTAA+TGG | - | chr1.4:49001287-49001306 | MS.gene73544:intron | 30.0% | |
| CCTTGTTAACATTAGTAATG+CGG | - | chr1.4:48998971-48998990 | MS.gene73544:intron | 30.0% | |
| CTATTTAGGTGATATCTTCT+AGG | - | chr1.4:48999992-49000011 | MS.gene73544:intron | 30.0% | |
| GAATTCGTTCATTAAGCATT+AGG | + | chr1.4:49000702-49000721 | None:intergenic | 30.0% | |
| GATGTTAATTCTGATGGTTA+TGG | - | chr1.4:49001312-49001331 | MS.gene73544:CDS | 30.0% | |
| GCATCAAAATAAAAGAATGG+AGG | + | chr1.4:48998211-48998230 | None:intergenic | 30.0% | |
| TAATAATGTTCTTCGTGGAT+CGG | - | chr1.4:48999194-48999213 | MS.gene73544:intron | 30.0% | |
| TCATATGCCCATAATTTAAG+TGG | + | chr1.4:49000650-49000669 | None:intergenic | 30.0% | |
| TCTTTACAAACTTCATGACA+TGG | - | chr1.4:49001274-49001293 | MS.gene73544:intron | 30.0% | |
| TGAGTAAAGTGATTACAAAG+TGG | - | chr1.4:49000880-49000899 | MS.gene73544:intron | 30.0% | |
| TTGAAAATACTGAACATCGA+TGG | - | chr1.4:48998734-48998753 | MS.gene73544:intron | 30.0% | |
| TTTAATCTTCATAATGGCTG+TGG | + | chr1.4:48999144-48999163 | None:intergenic | 30.0% | |
| ! | AAACTAATGATAGTGATGTC+AGG | + | chr1.4:49000355-49000374 | None:intergenic | 30.0% |
| ! | ACTCGCAATAGGATTATTTT+TGG | + | chr1.4:49000253-49000272 | None:intergenic | 30.0% |
| ! | AGCAAACATTCTTTTTGTTG+TGG | - | chr1.4:48999325-48999344 | MS.gene73544:intron | 30.0% |
| ! | ATTTTCATTGTAGTTGTGCT+AGG | - | chr1.4:49001166-49001185 | MS.gene73544:intron | 30.0% |
| ! | CTCATACACATGTTGTTTAT+TGG | + | chr1.4:49000041-49000060 | None:intergenic | 30.0% |
| ! | GAGTATTTTACCACATACAA+AGG | - | chr1.4:49000093-49000112 | MS.gene73544:CDS | 30.0% |
| ! | GTATTTTACCACATACAAAG+GGG | - | chr1.4:49000095-49000114 | MS.gene73544:CDS | 30.0% |
| ! | TATTTCCCTTTGCTATGTAA+TGG | - | chr1.4:49000491-49000510 | MS.gene73544:intron | 30.0% |
| ! | TTTTCATTGTAGTTGTGCTA+GGG | - | chr1.4:49001167-49001186 | MS.gene73544:intron | 30.0% |
| !! | CAGTAATTTCTAGAACCTAT+AGG | + | chr1.4:49000215-49000234 | None:intergenic | 30.0% |
| !! | CTATAGGTTCTAGAAATTAC+TGG | - | chr1.4:49000213-49000232 | MS.gene73544:intron | 30.0% |
| !! | CTCTTTCTCATTTGTTTCTA+AGG | - | chr1.4:48998141-48998160 | MS.gene73544:CDS | 30.0% |
| !!! | GCTTAATATTTTGACTGTAC+AGG | - | chr1.4:48999347-48999366 | MS.gene73544:intron | 30.0% |
| !!! | TAGAGAAATAGTTGCTGTTT+TGG | - | chr1.4:48999371-48999390 | MS.gene73544:intron | 30.0% |
| AAATGATTCCCCTTTGTATG+TGG | + | chr1.4:49000106-49000125 | None:intergenic | 35.0% | |
| AAATTATGGGCATATGAGGT+TGG | - | chr1.4:49000653-49000672 | MS.gene73544:intron | 35.0% | |
| AACATTAGTAATGCGGTTTC+AGG | - | chr1.4:48998978-48998997 | MS.gene73544:intron | 35.0% | |
| AACATTTCTACACCAGTGTT+CGG | + | chr1.4:49001363-49001382 | None:intergenic | 35.0% | |
| AATAATGTTCTTCGTGGATC+GGG | - | chr1.4:48999195-48999214 | MS.gene73544:intron | 35.0% | |
| AATACTGAACATCGATGGTT+TGG | - | chr1.4:48998739-48998758 | MS.gene73544:intron | 35.0% | |
| AATCCAAGCGATAAAGTAAG+AGG | + | chr1.4:49000318-49000337 | None:intergenic | 35.0% | |
| AATGATACAGTTCACCTTTC+TGG | + | chr1.4:49000384-49000403 | None:intergenic | 35.0% | |
| AATGTCAAAACACTCGCAAT+AGG | + | chr1.4:49000264-49000283 | None:intergenic | 35.0% | |
| ACATTCATTATGTGTTCTGC+AGG | - | chr1.4:49000279-49000298 | MS.gene73544:intron | 35.0% | |
| ACTTACTTGACAAGCAAATG+TGG | + | chr1.4:49001044-49001063 | None:intergenic | 35.0% | |
| ATTCCTCTTACTTTATCGCT+TGG | - | chr1.4:49000312-49000331 | MS.gene73544:intron | 35.0% | |
| CATGTTGTCTATGCATGAAA+AGG | - | chr1.4:48998582-48998601 | MS.gene73544:CDS | 35.0% | |
| CCGCATTACTAATGTTAACA+AGG | + | chr1.4:48998974-48998993 | None:intergenic | 35.0% | |
| CTAACTCAACCCTACAAAAT+CGG | - | chr1.4:48999934-48999953 | MS.gene73544:intron | 35.0% | |
| GAGACAATCTTACCATGTAA+GGG | + | chr1.4:48999482-48999501 | None:intergenic | 35.0% | |
| GGTTCCAAAGAAAATCTCTT+TGG | - | chr1.4:48998603-48998622 | MS.gene73544:intron | 35.0% | |
| TAAAACACAGTTCCCTTACA+TGG | - | chr1.4:48999467-48999486 | MS.gene73544:intron | 35.0% | |
| TAGAGCAACTTACACTCTTT+AGG | - | chr1.4:49001410-49001429 | MS.gene73544:CDS | 35.0% | |
| TCCGAAGCCACTTAAATTAT+GGG | - | chr1.4:49000640-49000659 | MS.gene73544:intron | 35.0% | |
| TTGCTTATTACACCTTGTGA+TGG | - | chr1.4:48999704-48999723 | MS.gene73544:intron | 35.0% | |
| TTGGGCATCTTGAAATAGAT+GGG | - | chr1.4:48999550-48999569 | MS.gene73544:intron | 35.0% | |
| TTTCATTGTAGTTGTGCTAG+GGG | - | chr1.4:49001168-49001187 | MS.gene73544:intron | 35.0% | |
| TTTGGGCATCTTGAAATAGA+TGG | - | chr1.4:48999549-48999568 | MS.gene73544:intron | 35.0% | |
| ! | ACAGCCAAAGAGATTTTCTT+TGG | + | chr1.4:48998610-48998629 | None:intergenic | 35.0% |
| ! | AGAGCATTAGTAATCCCTAT+AGG | - | chr1.4:49000197-49000216 | MS.gene73544:intron | 35.0% |
| ! | ATAATGTGCTACTGTGCTTT+GGG | + | chr1.4:48998353-48998372 | None:intergenic | 35.0% |
| ! | ATCTCTTTGGCTGTCTTATT+TGG | - | chr1.4:48998616-48998635 | MS.gene73544:intron | 35.0% |
| !! | ATCTTACGAACCGATTTTGT+AGG | + | chr1.4:48999947-48999966 | None:intergenic | 35.0% |
| !! | CAAAATCGGTTCGTAAGATT+AGG | - | chr1.4:48999948-48999967 | MS.gene73544:intron | 35.0% |
| !! | GGTATGGACTATTGTTTTGT+AGG | - | chr1.4:48999241-48999260 | MS.gene73544:CDS | 35.0% |
| !! | TCTTACGAACCGATTTTGTA+GGG | + | chr1.4:48999946-48999965 | None:intergenic | 35.0% |
| !!! | GTATTTCTGCTGTTTTAGTG+TGG | - | chr1.4:48998805-48998824 | MS.gene73544:intron | 35.0% |
| !!! | TTTTTGCAGTCATTGACTTG+CGG | - | chr1.4:49000427-49000446 | MS.gene73544:intron | 35.0% |
| AATCGTTGTAAGATGCGAGA+TGG | + | chr1.4:48999646-48999665 | None:intergenic | 40.0% | |
| ACAACCTTCGCACGAAAATT+TGG | + | chr1.4:48999435-48999454 | None:intergenic | 40.0% | |
| ACATTGAAACGCCAGTGTTT+GGG | + | chr1.4:48999787-48999806 | None:intergenic | 40.0% | |
| CAACCTTCGCACGAAAATTT+GGG | + | chr1.4:48999434-48999453 | None:intergenic | 40.0% | |
| CATAATTTAAGTGGCTTCGG+AGG | + | chr1.4:49000641-49000660 | None:intergenic | 40.0% | |
| CCCTTCCATTACATAGCAAA+GGG | + | chr1.4:49000499-49000518 | None:intergenic | 40.0% | |
| CTCCGAAGCCACTTAAATTA+TGG | - | chr1.4:49000639-49000658 | MS.gene73544:intron | 40.0% | |
| GAAAATTTGGGCCGTTTCTT+GGG | + | chr1.4:48999422-48999441 | None:intergenic | 40.0% | |
| GCCCATAATTTAAGTGGCTT+CGG | + | chr1.4:49000644-49000663 | None:intergenic | 40.0% | |
| GGAGACAATCTTACCATGTA+AGG | + | chr1.4:48999483-48999502 | None:intergenic | 40.0% | |
| GTCCATACCTTTCGACAAAA+TGG | + | chr1.4:48999230-48999249 | None:intergenic | 40.0% | |
| GTGTTCGGATCTTCCAAAAA+AGG | + | chr1.4:49001348-49001367 | None:intergenic | 40.0% | |
| TACATTGAAACGCCAGTGTT+TGG | + | chr1.4:48999788-48999807 | None:intergenic | 40.0% | |
| TATGCTTGGTCGCATTACAA+AGG | - | chr1.4:49000456-49000475 | MS.gene73544:intron | 40.0% | |
| TCAGAAAACTGGACATTTCC+AGG | - | chr1.4:49001215-49001234 | MS.gene73544:intron | 40.0% | |
| TCATTAAGCATTAGGATGCG+TGG | + | chr1.4:49000694-49000713 | None:intergenic | 40.0% | |
| TCCCTTCCATTACATAGCAA+AGG | + | chr1.4:49000500-49000519 | None:intergenic | 40.0% | |
| TCGCATAACAGTGACTTAGA+CGG | - | chr1.4:48998430-48998449 | MS.gene73544:intron | 40.0% | |
| TGATACAGTCAGTTACTTGC+TGG | + | chr1.4:49000953-49000972 | None:intergenic | 40.0% | |
| TTCTATCCTTGCCCAAGAAA+CGG | - | chr1.4:48999408-48999427 | MS.gene73544:intron | 40.0% | |
| TTCTGATGGTTATGGTTCAC+AGG | - | chr1.4:49001320-49001339 | MS.gene73544:CDS | 40.0% | |
| ! | AAGCAGTTTAGCTTAGTGAC+TGG | + | chr1.4:48999580-48999599 | None:intergenic | 40.0% |
| ! | CCCTTTGCTATGTAATGGAA+GGG | - | chr1.4:49000496-49000515 | MS.gene73544:intron | 40.0% |
| ! | GATAATGTGCTACTGTGCTT+TGG | + | chr1.4:48998354-48998373 | None:intergenic | 40.0% |
| ! | GTCCATTTTGTCGAAAGGTA+TGG | - | chr1.4:48999225-48999244 | MS.gene73544:CDS | 40.0% |
| ! | TAATGTGCTACTGTGCTTTG+GGG | + | chr1.4:48998352-48998371 | None:intergenic | 40.0% |
| ! | TCCCTTTGCTATGTAATGGA+AGG | - | chr1.4:49000495-49000514 | MS.gene73544:intron | 40.0% |
| !! | TATTAGGTTGACCCAAACAC+TGG | - | chr1.4:48999773-48999792 | MS.gene73544:intron | 40.0% |
| !! | TTTTTGGAAGATCCGAACAC+TGG | - | chr1.4:49001348-49001367 | MS.gene73544:CDS | 40.0% |
| !!! | TGGTTCACAGGTACCTTTTT+TGG | - | chr1.4:49001332-49001351 | MS.gene73544:CDS | 40.0% |
| ATTATGTGTTCTGCAGGCGA+TGG | - | chr1.4:49000285-49000304 | MS.gene73544:intron | 45.0% | |
| CATAACAGTGACTTAGACGG+TGG | - | chr1.4:48998433-48998452 | MS.gene73544:intron | 45.0% | |
| CGAAAATTTGGGCCGTTTCT+TGG | + | chr1.4:48999423-48999442 | None:intergenic | 45.0% | |
| TTTGGGGAAGTAACAGGGAT+TGG | + | chr1.4:48998336-48998355 | None:intergenic | 45.0% | |
| ! | AATCGTACGCGAAGTACTTG+TGG | - | chr1.4:49001007-49001026 | MS.gene73544:intron | 45.0% |
| ! | ACGCGAAGTACTTGTGGAAT+TGG | - | chr1.4:49001013-49001032 | MS.gene73544:intron | 45.0% |
| ! | CAGCTGTCCATTTTGTCGAA+AGG | - | chr1.4:48999220-48999239 | MS.gene73544:intron | 45.0% |
| ! | TAGATCTCAATGGGCTTCTC+TGG | + | chr1.4:48999041-48999060 | None:intergenic | 45.0% |
| ! | TTCGCGTACGATTTTGCAGA+AGG | + | chr1.4:49001000-49001019 | None:intergenic | 45.0% |
| !! | ACTTGCGGTTTTGCTATGCT+TGG | - | chr1.4:49000442-49000461 | MS.gene73544:intron | 45.0% |
| !! | TGTGCTTTGGGGAAGTAACA+GGG | + | chr1.4:48998341-48998360 | None:intergenic | 45.0% |
| CGTGCGAAGGTTGTTGAGAT+GGG | - | chr1.4:48999441-48999460 | MS.gene73544:intron | 50.0% | |
| TCGTGCGAAGGTTGTTGAGA+TGG | - | chr1.4:48999440-48999459 | MS.gene73544:intron | 50.0% | |
| ! | GATGCGTGGTTTGCATGTTG+TGG | + | chr1.4:49000680-49000699 | None:intergenic | 50.0% |
| !! | CTGTGCTTTGGGGAAGTAAC+AGG | + | chr1.4:48998342-48998361 | None:intergenic | 50.0% |
| GCGAAGGTTGTTGAGATGGG+TGG | - | chr1.4:48999444-48999463 | MS.gene73544:intron | 55.0% | |
| TTTGGGCCGTTTCTTGGGCA+AGG | + | chr1.4:48999417-48999436 | None:intergenic | 55.0% | |
| ! | CGGCCCAAATTTTCGTGCGA+AGG | - | chr1.4:48999428-48999447 | MS.gene73544:intron | 55.0% |
| GGCTTCGGAGGTAACTTCGC+TGG | + | chr1.4:49000629-49000648 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 48998138 | 49001431 | 48998138 | ID=MS.gene73544 |
| chr1.4 | mRNA | 48998138 | 49001431 | 48998138 | ID=MS.gene73544.t1;Parent=MS.gene73544 |
| chr1.4 | exon | 49001292 | 49001431 | 49001292 | ID=MS.gene73544.t1.exon1;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 49001292 | 49001431 | 49001292 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 49000497 | 49000569 | 49000497 | ID=MS.gene73544.t1.exon2;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 49000497 | 49000569 | 49000497 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 49000328 | 49000346 | 49000328 | ID=MS.gene73544.t1.exon3;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 49000328 | 49000346 | 49000328 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 49000081 | 49000200 | 49000081 | ID=MS.gene73544.t1.exon4;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 49000081 | 49000200 | 49000081 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48999721 | 48999790 | 48999721 | ID=MS.gene73544.t1.exon5;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48999721 | 48999790 | 48999721 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48999225 | 48999268 | 48999225 | ID=MS.gene73544.t1.exon6;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48999225 | 48999268 | 48999225 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48999092 | 48999133 | 48999092 | ID=MS.gene73544.t1.exon7;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48999092 | 48999133 | 48999092 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48998899 | 48998958 | 48998899 | ID=MS.gene73544.t1.exon8;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48998899 | 48998958 | 48998899 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48998512 | 48998615 | 48998512 | ID=MS.gene73544.t1.exon9;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48998512 | 48998615 | 48998512 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48998333 | 48998390 | 48998333 | ID=MS.gene73544.t1.exon10;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48998333 | 48998390 | 48998333 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| chr1.4 | exon | 48998138 | 48998227 | 48998138 | ID=MS.gene73544.t1.exon11;Parent=MS.gene73544.t1 |
| chr1.4 | CDS | 48998138 | 48998227 | 48998138 | ID=cds.MS.gene73544.t1;Parent=MS.gene73544.t1 |
| Gene Sequence |
| Protein sequence |
