Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27093.t1 | RHN77635.1 | 86 | 271 | 14 | 1 | 90 | 336 | 33 | 303 | 2.50E-124 | 455.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27093.t1 | Q94CH6 | 47.6 | 273 | 117 | 3 | 88 | 336 | 31 | 301 | 6.6e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27093.t1 | G7I7S5 | 86.0 | 271 | 14 | 1 | 90 | 336 | 24 | 294 | 1.8e-124 | 455.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene27093 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene049373 | MS.gene27093 | 0.820938 | 5.26E-53 | -1.69E-46 |
| MS.gene049488 | MS.gene27093 | 0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene27093 | 0.830285 | 3.20E-55 | -1.69E-46 |
| MS.gene050400 | MS.gene27093 | 0.809887 | 1.52E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene27093 | -0.812252 | 4.65E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene27093 | 0.810259 | 1.26E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene27093 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene27093 | 0.810589 | 1.07E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene27093 | 0.823926 | 1.06E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene27093 | 0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene27093 | 0.813438 | 2.56E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene27093 | 0.881222 | 2.87E-70 | -1.69E-46 |
| MS.gene051552 | MS.gene27093 | -0.838764 | 2.37E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene27093 | 0.832014 | 1.20E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene27093 | 0.833398 | 5.46E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene27093 | -0.832924 | 7.16E-56 | -1.69E-46 |
| MS.gene052128 | MS.gene27093 | -0.808138 | 3.59E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene27093 | 0.812109 | 5.00E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene27093 | 0.809488 | 1.85E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene27093 | 0.809493 | 1.84E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene27093 | 0.819389 | 1.19E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene27093 | 0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene052469 | MS.gene27093 | 0.806277 | 8.90E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene27093 | 0.806879 | 6.64E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene27093 | 0.848808 | 4.84E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene27093 | 0.817304 | 3.54E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene27093 | 0.854686 | 1.04E-61 | -1.69E-46 |
| MS.gene052589 | MS.gene27093 | 0.841495 | 4.59E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene27093 | 0.811426 | 7.04E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene27093 | 0.81469 | 1.35E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene27093 | 0.832797 | 7.70E-56 | -1.69E-46 |
| MS.gene053330 | MS.gene27093 | 0.845532 | 3.83E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene27093 | 0.800304 | 1.53E-48 | -1.69E-46 |
| MS.gene053873 | MS.gene27093 | 0.815052 | 1.13E-51 | -1.69E-46 |
| MS.gene054102 | MS.gene27093 | 0.836934 | 6.99E-57 | -1.69E-46 |
| MS.gene054103 | MS.gene27093 | 0.831108 | 2.01E-55 | -1.69E-46 |
| MS.gene054107 | MS.gene27093 | 0.863994 | 1.67E-64 | -1.69E-46 |
| MS.gene054110 | MS.gene27093 | 0.828414 | 9.11E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene27093 | 0.80749 | 4.93E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene27093 | -0.817274 | 3.59E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene27093 | -0.83383 | 4.26E-56 | -1.69E-46 |
| MS.gene055159 | MS.gene27093 | -0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene055289 | MS.gene27093 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene27093 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene055370 | MS.gene27093 | 0.809821 | 1.57E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene27093 | 0.820899 | 5.38E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene27093 | 0.831489 | 1.62E-55 | -1.69E-46 |
| MS.gene05556 | MS.gene27093 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene27093 | 0.812799 | 3.54E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene27093 | 0.813787 | 2.14E-51 | -1.69E-46 |
| MS.gene056337 | MS.gene27093 | 0.823876 | 1.09E-53 | -1.69E-46 |
| MS.gene056351 | MS.gene27093 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene27093 | 0.870219 | 1.72E-66 | -1.69E-46 |
| MS.gene056633 | MS.gene27093 | 0.82144 | 4.03E-53 | -1.69E-46 |
| MS.gene056782 | MS.gene27093 | 0.827702 | 1.35E-54 | -1.69E-46 |
| MS.gene056877 | MS.gene27093 | 0.871082 | 8.96E-67 | -1.69E-46 |
| MS.gene056920 | MS.gene27093 | -0.802274 | 6.06E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene27093 | 0.800106 | 1.68E-48 | -1.69E-46 |
| MS.gene057124 | MS.gene27093 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene27093 | 0.839369 | 1.65E-57 | -1.69E-46 |
| MS.gene057332 | MS.gene27093 | 0.84217 | 3.05E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene27093 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene27093 | 0.813664 | 2.28E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene27093 | 0.806572 | 7.71E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene27093 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene057825 | MS.gene27093 | 0.821268 | 4.42E-53 | -1.69E-46 |
| MS.gene057833 | MS.gene27093 | 0.801165 | 1.02E-48 | -1.69E-46 |
| MS.gene057856 | MS.gene27093 | 0.800783 | 1.23E-48 | -1.69E-46 |
| MS.gene057888 | MS.gene27093 | 0.838625 | 2.57E-57 | -1.69E-46 |
| MS.gene058418 | MS.gene27093 | -0.829442 | 5.14E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene27093 | 0.842697 | 2.21E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene27093 | 0.83561 | 1.52E-56 | -1.69E-46 |
| MS.gene058746 | MS.gene27093 | 0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene27093 | 0.827304 | 1.68E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene27093 | 0.804123 | 2.51E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene27093 | 0.817151 | 3.83E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene27093 | 0.801549 | 8.55E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene27093 | 0.818471 | 1.93E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene27093 | 0.818626 | 1.78E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene27093 | 0.818748 | 1.67E-52 | -1.69E-46 |
| MS.gene059512 | MS.gene27093 | 0.845747 | 3.35E-59 | -1.69E-46 |
| MS.gene059683 | MS.gene27093 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene059853 | MS.gene27093 | -0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene27093 | -0.800626 | 1.32E-48 | -1.69E-46 |
| MS.gene060403 | MS.gene27093 | 0.829966 | 3.83E-55 | -1.69E-46 |
| MS.gene060485 | MS.gene27093 | 0.852029 | 6.04E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene27093 | 0.80163 | 8.23E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene27093 | 0.804052 | 2.60E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene27093 | 0.814629 | 1.40E-51 | -1.69E-46 |
| MS.gene061214 | MS.gene27093 | 0.82048 | 6.71E-53 | -1.69E-46 |
| MS.gene061215 | MS.gene27093 | 0.819742 | 9.90E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27093.t1 | MTR_1g025680 | 87.594 | 266 | 9 | 1 | 95 | 336 | 29 | 294 | 9.07e-161 | 457 |
| MS.gene27093.t1 | MTR_3g114090 | 65.704 | 277 | 70 | 2 | 84 | 336 | 21 | 296 | 6.97e-125 | 363 |
| MS.gene27093.t1 | MTR_1g025700 | 68.061 | 263 | 59 | 2 | 98 | 336 | 48 | 309 | 9.38e-122 | 355 |
| MS.gene27093.t1 | MTR_1g025720 | 65.517 | 261 | 65 | 2 | 100 | 336 | 37 | 296 | 2.67e-116 | 341 |
| MS.gene27093.t1 | MTR_1g025780 | 56.997 | 293 | 94 | 4 | 68 | 336 | 15 | 299 | 3.92e-110 | 325 |
| MS.gene27093.t1 | MTR_3g114120 | 58.271 | 266 | 86 | 2 | 95 | 336 | 42 | 306 | 4.57e-107 | 318 |
| MS.gene27093.t1 | MTR_1g025760 | 60.000 | 275 | 84 | 3 | 90 | 339 | 70 | 343 | 4.65e-107 | 319 |
| MS.gene27093.t1 | MTR_5g022630 | 49.618 | 262 | 107 | 2 | 100 | 336 | 43 | 304 | 8.12e-81 | 251 |
| MS.gene27093.t1 | MTR_8g075230 | 48.289 | 263 | 111 | 2 | 98 | 336 | 34 | 295 | 2.22e-80 | 249 |
| MS.gene27093.t1 | MTR_8g075200 | 47.126 | 261 | 113 | 2 | 100 | 336 | 41 | 300 | 6.30e-77 | 242 |
| MS.gene27093.t1 | MTR_5g022640 | 46.212 | 264 | 116 | 3 | 98 | 336 | 41 | 303 | 2.28e-75 | 236 |
| MS.gene27093.t1 | MTR_8g075220 | 47.368 | 266 | 110 | 4 | 100 | 336 | 40 | 304 | 4.73e-75 | 236 |
| MS.gene27093.t1 | MTR_6g034400 | 79.508 | 122 | 25 | 0 | 153 | 274 | 3 | 124 | 1.14e-64 | 201 |
| MS.gene27093.t1 | MTR_1g025910 | 41.923 | 260 | 123 | 5 | 105 | 339 | 41 | 297 | 4.90e-58 | 192 |
| MS.gene27093.t1 | MTR_5g084750 | 36.742 | 264 | 142 | 2 | 97 | 336 | 27 | 289 | 4.71e-55 | 184 |
| MS.gene27093.t1 | MTR_5g084770 | 37.358 | 265 | 140 | 3 | 97 | 336 | 25 | 288 | 1.11e-52 | 177 |
| MS.gene27093.t1 | MTR_3g082830 | 38.403 | 263 | 137 | 4 | 98 | 336 | 36 | 297 | 5.71e-51 | 173 |
| MS.gene27093.t1 | MTR_4g087985 | 36.630 | 273 | 137 | 4 | 100 | 340 | 36 | 304 | 1.15e-50 | 172 |
| MS.gene27093.t1 | MTR_3g464730 | 37.405 | 262 | 138 | 4 | 100 | 336 | 28 | 288 | 2.95e-49 | 169 |
| MS.gene27093.t1 | MTR_5g084790 | 38.314 | 261 | 136 | 3 | 100 | 336 | 32 | 291 | 3.65e-49 | 168 |
| MS.gene27093.t1 | MTR_2g015080 | 36.567 | 268 | 135 | 5 | 103 | 336 | 41 | 307 | 5.68e-49 | 168 |
| MS.gene27093.t1 | MTR_5g074270 | 34.286 | 280 | 156 | 3 | 84 | 336 | 17 | 295 | 9.53e-47 | 162 |
| MS.gene27093.t1 | MTR_8g014910 | 34.082 | 267 | 151 | 2 | 94 | 336 | 26 | 291 | 1.63e-44 | 156 |
| MS.gene27093.t1 | MTR_5g083040 | 33.582 | 268 | 145 | 4 | 100 | 336 | 32 | 297 | 4.03e-42 | 150 |
| MS.gene27093.t1 | MTR_2g100620 | 32.090 | 268 | 157 | 2 | 93 | 336 | 24 | 290 | 9.99e-41 | 146 |
| MS.gene27093.t1 | MTR_2g084585 | 33.585 | 265 | 147 | 6 | 100 | 338 | 30 | 291 | 7.08e-39 | 141 |
| MS.gene27093.t1 | MTR_4g056280 | 33.969 | 262 | 146 | 4 | 100 | 336 | 30 | 289 | 3.63e-38 | 139 |
| MS.gene27093.t1 | MTR_4g056160 | 30.303 | 264 | 158 | 2 | 98 | 336 | 25 | 287 | 1.73e-35 | 132 |
| MS.gene27093.t1 | MTR_7g116520 | 34.470 | 264 | 145 | 5 | 99 | 336 | 33 | 294 | 5.80e-34 | 129 |
| MS.gene27093.t1 | MTR_7g116570 | 33.824 | 272 | 148 | 7 | 93 | 336 | 27 | 294 | 3.77e-33 | 126 |
| MS.gene27093.t1 | MTR_1g079530 | 36.287 | 237 | 123 | 5 | 99 | 309 | 28 | 262 | 5.48e-33 | 125 |
| MS.gene27093.t1 | MTR_1g079540 | 32.955 | 264 | 149 | 5 | 99 | 336 | 30 | 291 | 1.44e-32 | 125 |
| MS.gene27093.t1 | MTR_8g087890 | 31.852 | 270 | 151 | 7 | 95 | 336 | 26 | 290 | 2.96e-32 | 124 |
| MS.gene27093.t1 | MTR_1g079590 | 39.106 | 179 | 104 | 4 | 99 | 274 | 30 | 206 | 9.47e-32 | 119 |
| MS.gene27093.t1 | MTR_0565s0010 | 32.576 | 264 | 144 | 9 | 102 | 336 | 34 | 292 | 2.32e-31 | 121 |
| MS.gene27093.t1 | MTR_7g116510 | 34.717 | 265 | 144 | 5 | 99 | 336 | 24 | 286 | 2.73e-31 | 121 |
| MS.gene27093.t1 | MTR_1g069175 | 32.830 | 265 | 150 | 5 | 99 | 336 | 32 | 295 | 3.55e-31 | 121 |
| MS.gene27093.t1 | MTR_5g078210 | 31.734 | 271 | 153 | 6 | 95 | 336 | 17 | 284 | 1.12e-30 | 119 |
| MS.gene27093.t1 | MTR_3g098270 | 31.716 | 268 | 152 | 6 | 98 | 336 | 32 | 297 | 1.12e-30 | 120 |
| MS.gene27093.t1 | MTR_5g078210 | 31.734 | 271 | 153 | 6 | 95 | 336 | 17 | 284 | 1.59e-30 | 119 |
| MS.gene27093.t1 | MTR_1g024890 | 33.333 | 264 | 148 | 5 | 99 | 336 | 31 | 292 | 1.85e-30 | 119 |
| MS.gene27093.t1 | MTR_7g116500 | 33.835 | 266 | 144 | 6 | 99 | 336 | 32 | 293 | 1.90e-30 | 119 |
| MS.gene27093.t1 | MTR_8g079050 | 32.847 | 274 | 144 | 9 | 98 | 336 | 35 | 303 | 1.94e-30 | 119 |
| MS.gene27093.t1 | MTR_8g087870 | 32.800 | 250 | 137 | 6 | 98 | 320 | 27 | 272 | 3.59e-30 | 118 |
| MS.gene27093.t1 | MTR_3g024510 | 32.482 | 274 | 150 | 9 | 92 | 336 | 30 | 297 | 7.00e-30 | 117 |
| MS.gene27093.t1 | MTR_6g021530 | 32.443 | 262 | 148 | 6 | 102 | 336 | 31 | 290 | 7.87e-29 | 114 |
| MS.gene27093.t1 | MTR_3g005650 | 33.206 | 262 | 144 | 8 | 100 | 336 | 30 | 285 | 1.47e-28 | 114 |
| MS.gene27093.t1 | MTR_4g019880 | 32.103 | 271 | 154 | 6 | 94 | 336 | 26 | 294 | 2.27e-28 | 113 |
| MS.gene27093.t1 | MTR_2g017915 | 35.652 | 230 | 136 | 8 | 100 | 321 | 33 | 258 | 4.00e-27 | 110 |
| MS.gene27093.t1 | MTR_4g035353 | 31.698 | 265 | 151 | 6 | 98 | 335 | 29 | 290 | 4.65e-27 | 109 |
| MS.gene27093.t1 | MTR_2g033930 | 33.585 | 265 | 142 | 9 | 100 | 336 | 32 | 290 | 7.30e-27 | 109 |
| MS.gene27093.t1 | MTR_7g008060 | 31.061 | 264 | 141 | 6 | 99 | 336 | 32 | 280 | 1.01e-26 | 108 |
| MS.gene27093.t1 | MTR_4g036375 | 35.484 | 155 | 99 | 1 | 94 | 248 | 24 | 177 | 1.07e-26 | 105 |
| MS.gene27093.t1 | MTR_5g009100 | 31.801 | 261 | 150 | 7 | 102 | 336 | 48 | 306 | 2.03e-26 | 108 |
| MS.gene27093.t1 | MTR_2g033920 | 29.508 | 305 | 176 | 9 | 64 | 340 | 6 | 299 | 1.47e-25 | 104 |
| MS.gene27093.t1 | MTR_2g017875 | 35.385 | 195 | 118 | 6 | 98 | 287 | 32 | 223 | 3.09e-25 | 104 |
| MS.gene27093.t1 | MTR_2g033920 | 29.568 | 301 | 173 | 9 | 64 | 336 | 6 | 295 | 8.13e-25 | 103 |
| MS.gene27093.t1 | MTR_2g017925 | 43.333 | 150 | 79 | 5 | 100 | 247 | 33 | 178 | 8.36e-25 | 103 |
| MS.gene27093.t1 | MTR_2g017955 | 36.649 | 191 | 113 | 6 | 100 | 286 | 33 | 219 | 1.61e-24 | 103 |
| MS.gene27093.t1 | MTR_4g122200 | 32.090 | 268 | 148 | 8 | 98 | 336 | 33 | 295 | 4.26e-24 | 101 |
| MS.gene27093.t1 | MTR_3g052480 | 33.209 | 268 | 144 | 7 | 100 | 336 | 33 | 296 | 5.67e-24 | 101 |
| MS.gene27093.t1 | MTR_2g017965 | 41.558 | 154 | 85 | 4 | 100 | 251 | 33 | 183 | 6.84e-24 | 101 |
| MS.gene27093.t1 | MTR_3g052490 | 32.197 | 264 | 151 | 4 | 100 | 336 | 32 | 294 | 2.66e-23 | 99.4 |
| MS.gene27093.t1 | MTR_5g093090 | 32.453 | 265 | 149 | 5 | 100 | 336 | 28 | 290 | 4.68e-23 | 97.8 |
| MS.gene27093.t1 | MTR_0009s0250 | 31.868 | 273 | 157 | 11 | 86 | 336 | 19 | 284 | 4.96e-23 | 98.6 |
| MS.gene27093.t1 | MTR_3g435540 | 28.897 | 263 | 161 | 5 | 102 | 339 | 25 | 286 | 6.01e-23 | 98.6 |
| MS.gene27093.t1 | MTR_3g023220 | 31.020 | 245 | 140 | 8 | 98 | 318 | 31 | 270 | 6.16e-23 | 98.2 |
| MS.gene27093.t1 | MTR_5g093090 | 32.453 | 265 | 149 | 5 | 100 | 336 | 28 | 290 | 8.21e-23 | 98.2 |
| MS.gene27093.t1 | MTR_5g093090 | 39.130 | 161 | 90 | 3 | 100 | 253 | 28 | 187 | 2.36e-22 | 94.0 |
| MS.gene27093.t1 | MTR_3g005660 | 29.851 | 268 | 149 | 9 | 102 | 336 | 38 | 299 | 2.42e-22 | 97.1 |
| MS.gene27093.t1 | MTR_8g031430 | 30.418 | 263 | 146 | 8 | 100 | 336 | 37 | 288 | 4.51e-22 | 95.9 |
| MS.gene27093.t1 | MTR_8g031420 | 29.658 | 263 | 148 | 8 | 100 | 336 | 35 | 286 | 1.17e-21 | 94.7 |
| MS.gene27093.t1 | MTR_2g044100 | 32.990 | 194 | 124 | 4 | 91 | 283 | 34 | 222 | 3.49e-21 | 94.0 |
| MS.gene27093.t1 | MTR_4g108690 | 28.137 | 263 | 163 | 6 | 102 | 339 | 29 | 290 | 4.32e-21 | 93.2 |
| MS.gene27093.t1 | MTR_3g052580 | 31.955 | 266 | 148 | 7 | 100 | 336 | 27 | 288 | 6.23e-21 | 93.2 |
| MS.gene27093.t1 | MTR_3g052580 | 31.955 | 266 | 148 | 7 | 100 | 336 | 28 | 289 | 8.40e-21 | 92.8 |
| MS.gene27093.t1 | MTR_8g022810 | 32.632 | 190 | 122 | 5 | 99 | 287 | 40 | 224 | 2.31e-20 | 90.5 |
| MS.gene27093.t1 | MTR_8g022810 | 32.632 | 190 | 122 | 5 | 99 | 287 | 40 | 224 | 3.37e-20 | 90.9 |
| MS.gene27093.t1 | MTR_2g018015 | 35.176 | 199 | 112 | 8 | 98 | 287 | 34 | 224 | 1.78e-19 | 87.8 |
| MS.gene27093.t1 | MTR_3g069780 | 28.938 | 273 | 151 | 10 | 99 | 336 | 29 | 293 | 2.53e-19 | 88.2 |
| MS.gene27093.t1 | MTR_8g031400 | 29.278 | 263 | 149 | 8 | 100 | 336 | 37 | 288 | 3.03e-19 | 87.8 |
| MS.gene27093.t1 | MTR_3g463930 | 28.114 | 281 | 152 | 10 | 99 | 336 | 43 | 316 | 9.19e-19 | 87.0 |
| MS.gene27093.t1 | MTR_3g438030 | 28.309 | 272 | 154 | 8 | 99 | 336 | 29 | 293 | 1.13e-18 | 86.3 |
| MS.gene27093.t1 | MTR_3g463960 | 27.835 | 291 | 152 | 11 | 92 | 336 | 31 | 309 | 2.06e-18 | 85.9 |
| MS.gene27093.t1 | MTR_3g463950 | 27.835 | 291 | 152 | 11 | 92 | 336 | 31 | 309 | 2.06e-18 | 85.9 |
| MS.gene27093.t1 | MTR_3g463970 | 27.835 | 291 | 152 | 11 | 92 | 336 | 31 | 309 | 2.06e-18 | 85.9 |
| MS.gene27093.t1 | MTR_3g463940 | 27.835 | 291 | 152 | 11 | 92 | 336 | 31 | 309 | 2.06e-18 | 85.9 |
| MS.gene27093.t1 | MTR_3g021460 | 35.751 | 193 | 113 | 9 | 100 | 287 | 31 | 217 | 8.46e-18 | 83.6 |
| MS.gene27093.t1 | MTR_8g031390 | 28.137 | 263 | 151 | 9 | 100 | 336 | 37 | 287 | 1.13e-17 | 82.8 |
| MS.gene27093.t1 | MTR_8g031390 | 28.137 | 263 | 151 | 9 | 100 | 336 | 37 | 287 | 1.23e-17 | 83.6 |
| MS.gene27093.t1 | MTR_8g022790 | 27.757 | 263 | 159 | 6 | 100 | 336 | 37 | 294 | 1.68e-17 | 82.8 |
| MS.gene27093.t1 | MTR_6g049220 | 46.154 | 91 | 48 | 1 | 98 | 188 | 28 | 117 | 2.21e-17 | 79.0 |
| MS.gene27093.t1 | MTR_8g074580 | 36.242 | 149 | 88 | 4 | 100 | 242 | 44 | 191 | 5.17e-17 | 82.0 |
| MS.gene27093.t1 | MTR_2g461580 | 36.667 | 150 | 90 | 4 | 100 | 247 | 31 | 177 | 9.36e-17 | 80.5 |
| MS.gene27093.t1 | MTR_2g015580 | 28.364 | 275 | 157 | 9 | 99 | 336 | 46 | 317 | 1.03e-15 | 77.8 |
| MS.gene27093.t1 | MTR_2g087292 | 30.041 | 243 | 128 | 9 | 97 | 336 | 30 | 233 | 1.06e-15 | 76.6 |
| MS.gene27093.t1 | MTR_1g030268 | 28.417 | 278 | 150 | 11 | 100 | 339 | 40 | 306 | 3.30e-15 | 75.9 |
| MS.gene27093.t1 | MTR_1g030275 | 28.000 | 275 | 149 | 10 | 100 | 336 | 39 | 302 | 4.07e-15 | 76.3 |
| MS.gene27093.t1 | MTR_8g074570 | 33.108 | 148 | 92 | 3 | 101 | 242 | 39 | 185 | 5.36e-15 | 75.5 |
| MS.gene27093.t1 | MTR_1g030268 | 28.159 | 277 | 150 | 11 | 98 | 336 | 38 | 303 | 8.83e-15 | 75.1 |
| MS.gene27093.t1 | MTR_2g099155 | 42.857 | 77 | 44 | 0 | 13 | 89 | 37 | 113 | 1.82e-14 | 72.4 |
| MS.gene27093.t1 | MTR_2g099155 | 42.857 | 77 | 44 | 0 | 13 | 89 | 37 | 113 | 2.31e-14 | 72.4 |
| MS.gene27093.t1 | MTR_8g074560 | 33.735 | 166 | 101 | 4 | 84 | 242 | 15 | 178 | 1.49e-13 | 71.2 |
| MS.gene27093.t1 | MTR_2g015630 | 27.839 | 273 | 150 | 10 | 105 | 336 | 36 | 302 | 2.19e-13 | 70.9 |
| MS.gene27093.t1 | MTR_2g043990 | 31.048 | 248 | 131 | 12 | 99 | 323 | 95 | 325 | 2.43e-13 | 70.5 |
| MS.gene27093.t1 | MTR_2g043980 | 27.273 | 275 | 154 | 10 | 99 | 336 | 33 | 298 | 7.48e-13 | 69.3 |
| MS.gene27093.t1 | MTR_7g104220 | 29.648 | 199 | 121 | 8 | 89 | 286 | 31 | 211 | 4.07e-12 | 67.0 |
| MS.gene27093.t1 | MTR_5g062890 | 50.877 | 57 | 28 | 0 | 98 | 154 | 26 | 82 | 5.47e-12 | 62.0 |
| MS.gene27093.t1 | MTR_1g060490 | 25.000 | 260 | 144 | 10 | 99 | 329 | 36 | 273 | 1.93e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27093.t1 | AT1G75890 | 49.425 | 261 | 108 | 1 | 100 | 336 | 47 | 307 | 1.42e-83 | 258 |
| MS.gene27093.t1 | AT1G75890 | 49.425 | 261 | 108 | 1 | 100 | 336 | 76 | 336 | 2.24e-83 | 258 |
| MS.gene27093.t1 | AT1G75890 | 47.080 | 274 | 108 | 2 | 100 | 336 | 47 | 320 | 5.79e-80 | 249 |
| MS.gene27093.t1 | AT1G75900 | 47.619 | 273 | 117 | 3 | 88 | 336 | 31 | 301 | 1.39e-79 | 247 |
| MS.gene27093.t1 | AT1G75880 | 46.125 | 271 | 121 | 2 | 90 | 336 | 42 | 311 | 6.76e-77 | 241 |
| MS.gene27093.t1 | AT1G75880 | 45.956 | 272 | 121 | 3 | 90 | 336 | 42 | 312 | 4.51e-75 | 236 |
| MS.gene27093.t1 | AT3G14820 | 47.529 | 263 | 109 | 4 | 98 | 336 | 30 | 287 | 3.95e-73 | 230 |
| MS.gene27093.t1 | AT5G42170 | 45.489 | 266 | 117 | 3 | 95 | 336 | 45 | 306 | 1.77e-72 | 229 |
| MS.gene27093.t1 | AT1G20120 | 43.678 | 261 | 122 | 2 | 100 | 336 | 78 | 337 | 6.15e-68 | 219 |
| MS.gene27093.t1 | AT3G43550 | 43.866 | 269 | 121 | 5 | 95 | 338 | 25 | 288 | 4.30e-66 | 210 |
| MS.gene27093.t1 | AT1G59406 | 44.697 | 264 | 116 | 5 | 98 | 336 | 28 | 286 | 4.19e-64 | 207 |
| MS.gene27093.t1 | AT1G59030 | 44.697 | 264 | 116 | 5 | 98 | 336 | 28 | 286 | 4.19e-64 | 207 |
| MS.gene27093.t1 | AT1G58725 | 44.697 | 264 | 116 | 5 | 98 | 336 | 28 | 286 | 4.19e-64 | 207 |
| MS.gene27093.t1 | AT1G20132 | 44.061 | 261 | 121 | 2 | 100 | 336 | 61 | 320 | 5.19e-64 | 208 |
| MS.gene27093.t1 | AT3G43570 | 46.444 | 239 | 119 | 4 | 98 | 336 | 28 | 257 | 2.34e-63 | 204 |
| MS.gene27093.t1 | AT1G58520 | 44.318 | 264 | 117 | 5 | 98 | 336 | 28 | 286 | 6.02e-62 | 201 |
| MS.gene27093.t1 | AT1G58525 | 44.318 | 264 | 117 | 5 | 98 | 336 | 28 | 286 | 6.02e-62 | 201 |
| MS.gene27093.t1 | AT1G73610 | 40.385 | 260 | 133 | 3 | 98 | 336 | 33 | 291 | 6.78e-62 | 201 |
| MS.gene27093.t1 | AT5G63170 | 40.613 | 261 | 132 | 3 | 98 | 336 | 26 | 285 | 1.34e-58 | 192 |
| MS.gene27093.t1 | AT2G31540 | 39.544 | 263 | 133 | 2 | 100 | 336 | 35 | 297 | 2.70e-55 | 184 |
| MS.gene27093.t1 | AT1G23500 | 41.353 | 266 | 127 | 4 | 96 | 336 | 31 | 292 | 3.66e-55 | 184 |
| MS.gene27093.t1 | AT1G20135 | 39.313 | 262 | 135 | 3 | 98 | 336 | 27 | 287 | 3.86e-55 | 183 |
| MS.gene27093.t1 | AT1G20130 | 40.000 | 270 | 130 | 3 | 98 | 336 | 182 | 450 | 8.76e-55 | 187 |
| MS.gene27093.t1 | AT1G20130 | 40.000 | 270 | 130 | 3 | 98 | 336 | 202 | 470 | 1.60e-54 | 187 |
| MS.gene27093.t1 | AT2G04570 | 39.544 | 263 | 134 | 3 | 98 | 336 | 26 | 287 | 3.63e-54 | 181 |
| MS.gene27093.t1 | AT1G58430 | 39.394 | 264 | 132 | 3 | 100 | 336 | 35 | 297 | 1.11e-52 | 178 |
| MS.gene27093.t1 | AT2G40250 | 36.667 | 270 | 137 | 5 | 98 | 336 | 34 | 300 | 7.72e-52 | 176 |
| MS.gene27093.t1 | AT1G75920 | 41.132 | 265 | 125 | 5 | 100 | 336 | 29 | 290 | 8.24e-50 | 170 |
| MS.gene27093.t1 | AT1G06990 | 35.741 | 263 | 142 | 2 | 100 | 336 | 37 | 298 | 1.42e-49 | 170 |
| MS.gene27093.t1 | AT2G30220 | 37.500 | 264 | 137 | 3 | 100 | 336 | 33 | 295 | 1.86e-49 | 169 |
| MS.gene27093.t1 | AT5G45960 | 36.940 | 268 | 139 | 4 | 98 | 336 | 45 | 311 | 1.96e-49 | 170 |
| MS.gene27093.t1 | AT2G30310 | 36.882 | 263 | 140 | 3 | 100 | 336 | 34 | 296 | 4.90e-48 | 166 |
| MS.gene27093.t1 | AT2G24560 | 35.227 | 264 | 143 | 3 | 100 | 336 | 34 | 296 | 1.35e-47 | 163 |
| MS.gene27093.t1 | AT2G42990 | 36.502 | 263 | 142 | 3 | 98 | 336 | 26 | 287 | 3.17e-47 | 163 |
| MS.gene27093.t1 | AT2G24560 | 35.227 | 264 | 143 | 3 | 100 | 336 | 34 | 296 | 5.79e-47 | 163 |
| MS.gene27093.t1 | AT4G26790 | 34.483 | 261 | 146 | 2 | 100 | 336 | 29 | 288 | 2.58e-46 | 161 |
| MS.gene27093.t1 | AT4G26790 | 34.483 | 261 | 146 | 2 | 100 | 336 | 29 | 288 | 2.58e-46 | 161 |
| MS.gene27093.t1 | AT1G75910 | 38.636 | 264 | 134 | 4 | 100 | 336 | 28 | 290 | 2.90e-46 | 160 |
| MS.gene27093.t1 | AT5G03810 | 34.831 | 267 | 148 | 3 | 95 | 336 | 25 | 290 | 9.09e-46 | 159 |
| MS.gene27093.t1 | AT1G75920 | 38.929 | 280 | 125 | 6 | 100 | 336 | 24 | 300 | 1.03e-45 | 159 |
| MS.gene27093.t1 | AT1G75920 | 37.109 | 256 | 131 | 4 | 109 | 336 | 9 | 262 | 2.17e-41 | 147 |
| MS.gene27093.t1 | AT3G16370 | 32.319 | 263 | 153 | 2 | 98 | 336 | 28 | 289 | 2.52e-40 | 145 |
| MS.gene27093.t1 | AT5G03820 | 32.692 | 260 | 148 | 2 | 98 | 331 | 31 | 289 | 5.14e-38 | 139 |
| MS.gene27093.t1 | AT5G03820 | 32.692 | 260 | 148 | 2 | 98 | 331 | 59 | 317 | 1.13e-37 | 139 |
| MS.gene27093.t1 | AT1G75930 | 36.981 | 265 | 140 | 8 | 98 | 336 | 27 | 290 | 1.83e-36 | 135 |
| MS.gene27093.t1 | AT5G22810 | 31.343 | 268 | 152 | 5 | 98 | 336 | 32 | 296 | 6.59e-36 | 134 |
| MS.gene27093.t1 | AT5G45950 | 32.184 | 261 | 152 | 4 | 98 | 336 | 38 | 295 | 6.89e-36 | 133 |
| MS.gene27093.t1 | AT5G33370 | 33.333 | 264 | 148 | 5 | 99 | 336 | 29 | 290 | 9.55e-33 | 124 |
| MS.gene27093.t1 | AT5G18430 | 41.237 | 194 | 106 | 4 | 99 | 287 | 27 | 217 | 3.66e-32 | 124 |
| MS.gene27093.t1 | AT5G33370 | 33.333 | 264 | 148 | 5 | 99 | 336 | 29 | 290 | 4.52e-32 | 123 |
| MS.gene27093.t1 | AT1G29670 | 36.260 | 262 | 135 | 10 | 102 | 336 | 34 | 290 | 7.70e-32 | 123 |
| MS.gene27093.t1 | AT1G75920 | 34.340 | 265 | 112 | 6 | 100 | 336 | 29 | 259 | 1.33e-31 | 121 |
| MS.gene27093.t1 | AT1G29670 | 36.260 | 262 | 135 | 10 | 102 | 336 | 102 | 358 | 1.46e-31 | 123 |
| MS.gene27093.t1 | AT3G53100 | 29.885 | 261 | 158 | 2 | 100 | 336 | 29 | 288 | 2.02e-31 | 121 |
| MS.gene27093.t1 | AT3G50400 | 32.727 | 275 | 152 | 7 | 94 | 336 | 28 | 301 | 7.42e-30 | 117 |
| MS.gene27093.t1 | AT3G04290 | 32.197 | 264 | 151 | 5 | 99 | 336 | 28 | 289 | 1.14e-29 | 117 |
| MS.gene27093.t1 | AT4G28780 | 31.439 | 264 | 153 | 5 | 99 | 336 | 30 | 291 | 1.78e-29 | 116 |
| MS.gene27093.t1 | AT1G29660 | 32.319 | 263 | 145 | 9 | 102 | 336 | 34 | 291 | 1.93e-29 | 116 |
| MS.gene27093.t1 | AT2G23540 | 31.111 | 270 | 154 | 7 | 98 | 336 | 46 | 314 | 7.58e-29 | 115 |
| MS.gene27093.t1 | AT5G45670 | 31.818 | 264 | 146 | 8 | 102 | 336 | 31 | 289 | 8.66e-29 | 114 |
| MS.gene27093.t1 | AT4G18970 | 31.939 | 263 | 147 | 7 | 102 | 336 | 30 | 288 | 1.00e-28 | 114 |
| MS.gene27093.t1 | AT4G18970 | 31.939 | 263 | 147 | 7 | 102 | 336 | 30 | 288 | 1.79e-28 | 114 |
| MS.gene27093.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 100 | 328 | 43 | 289 | 3.62e-28 | 113 |
| MS.gene27093.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 100 | 328 | 43 | 289 | 3.62e-28 | 113 |
| MS.gene27093.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 100 | 328 | 43 | 289 | 3.62e-28 | 113 |
| MS.gene27093.t1 | AT2G03980 | 32.941 | 255 | 137 | 9 | 100 | 328 | 43 | 289 | 3.62e-28 | 113 |
| MS.gene27093.t1 | AT5G08460 | 31.835 | 267 | 150 | 6 | 100 | 336 | 49 | 313 | 7.59e-28 | 112 |
| MS.gene27093.t1 | AT2G19010 | 33.735 | 249 | 127 | 9 | 102 | 323 | 32 | 269 | 2.90e-27 | 110 |
| MS.gene27093.t1 | AT2G19010 | 33.735 | 249 | 127 | 9 | 102 | 323 | 62 | 299 | 4.32e-27 | 110 |
| MS.gene27093.t1 | AT2G04020 | 41.935 | 186 | 81 | 9 | 100 | 275 | 43 | 211 | 4.98e-27 | 107 |
| MS.gene27093.t1 | AT2G19050 | 31.048 | 248 | 135 | 10 | 102 | 323 | 33 | 270 | 1.40e-26 | 107 |
| MS.gene27093.t1 | AT5G37690 | 29.278 | 263 | 151 | 6 | 103 | 336 | 30 | 286 | 1.54e-26 | 108 |
| MS.gene27093.t1 | AT4G10950 | 28.839 | 267 | 160 | 7 | 97 | 336 | 68 | 331 | 1.58e-26 | 108 |
| MS.gene27093.t1 | AT2G19050 | 30.952 | 252 | 130 | 10 | 102 | 323 | 33 | 270 | 2.92e-26 | 107 |
| MS.gene27093.t1 | AT5G41890 | 32.222 | 270 | 145 | 9 | 102 | 336 | 33 | 299 | 3.32e-26 | 107 |
| MS.gene27093.t1 | AT2G04020 | 41.935 | 186 | 81 | 9 | 100 | 275 | 43 | 211 | 3.42e-26 | 106 |
| MS.gene27093.t1 | AT2G19060 | 33.333 | 255 | 129 | 12 | 102 | 325 | 32 | 276 | 2.26e-25 | 105 |
| MS.gene27093.t1 | AT5G15720 | 32.463 | 268 | 145 | 10 | 100 | 336 | 30 | 292 | 6.15e-25 | 103 |
| MS.gene27093.t1 | AT5G15720 | 32.463 | 268 | 145 | 10 | 100 | 336 | 30 | 292 | 1.30e-24 | 103 |
| MS.gene27093.t1 | AT5G55050 | 33.824 | 272 | 142 | 8 | 98 | 336 | 37 | 303 | 2.51e-24 | 102 |
| MS.gene27093.t1 | AT1G71691 | 30.741 | 270 | 151 | 9 | 95 | 336 | 50 | 311 | 2.68e-24 | 101 |
| MS.gene27093.t1 | AT1G71691 | 30.337 | 267 | 156 | 8 | 95 | 336 | 50 | 311 | 4.60e-24 | 102 |
| MS.gene27093.t1 | AT4G10950 | 28.839 | 267 | 156 | 8 | 97 | 336 | 68 | 327 | 5.36e-24 | 102 |
| MS.gene27093.t1 | AT4G16230 | 37.113 | 194 | 114 | 6 | 98 | 287 | 28 | 217 | 1.74e-23 | 97.8 |
| MS.gene27093.t1 | AT1G74460 | 28.077 | 260 | 161 | 6 | 102 | 336 | 25 | 283 | 6.77e-23 | 98.6 |
| MS.gene27093.t1 | AT1G53920 | 34.197 | 193 | 120 | 6 | 83 | 274 | 31 | 217 | 9.96e-23 | 98.2 |
| MS.gene27093.t1 | AT5G37690 | 28.137 | 263 | 146 | 7 | 103 | 336 | 30 | 278 | 4.31e-22 | 95.9 |
| MS.gene27093.t1 | AT1G71250 | 30.075 | 266 | 156 | 6 | 98 | 336 | 39 | 301 | 1.18e-21 | 95.1 |
| MS.gene27093.t1 | AT1G53940 | 29.630 | 270 | 158 | 9 | 99 | 341 | 38 | 302 | 1.38e-21 | 94.0 |
| MS.gene27093.t1 | AT1G33811 | 27.778 | 270 | 158 | 9 | 100 | 336 | 34 | 299 | 2.04e-21 | 94.4 |
| MS.gene27093.t1 | AT1G53940 | 29.167 | 264 | 155 | 9 | 100 | 336 | 39 | 297 | 7.96e-19 | 87.0 |
| MS.gene27093.t1 | AT4G30140 | 32.794 | 247 | 129 | 12 | 102 | 322 | 35 | 270 | 1.53e-17 | 82.8 |
| MS.gene27093.t1 | AT3G05180 | 25.795 | 283 | 171 | 8 | 86 | 336 | 24 | 299 | 5.14e-17 | 81.6 |
| MS.gene27093.t1 | AT5G40990 | 29.851 | 268 | 148 | 11 | 100 | 336 | 37 | 295 | 9.72e-17 | 80.9 |
| MS.gene27093.t1 | AT5G03610 | 28.063 | 253 | 145 | 7 | 101 | 331 | 44 | 281 | 2.85e-16 | 79.3 |
| MS.gene27093.t1 | AT1G71120 | 38.961 | 154 | 83 | 5 | 98 | 248 | 29 | 174 | 2.22e-15 | 76.6 |
| MS.gene27093.t1 | AT1G28590 | 29.617 | 287 | 144 | 12 | 98 | 339 | 34 | 307 | 3.70e-15 | 76.3 |
| MS.gene27093.t1 | AT1G28610 | 29.371 | 286 | 139 | 12 | 98 | 336 | 29 | 298 | 4.21e-15 | 76.3 |
| MS.gene27093.t1 | AT2G31550 | 28.846 | 156 | 85 | 2 | 207 | 336 | 1 | 156 | 4.24e-15 | 73.9 |
| MS.gene27093.t1 | AT1G53990 | 37.838 | 148 | 71 | 7 | 100 | 241 | 35 | 167 | 1.76e-13 | 71.2 |
| MS.gene27093.t1 | AT3G14225 | 37.013 | 154 | 83 | 7 | 100 | 247 | 37 | 182 | 2.22e-13 | 70.9 |
| MS.gene27093.t1 | AT3G14225 | 36.943 | 157 | 83 | 7 | 100 | 247 | 37 | 186 | 2.64e-13 | 70.5 |
| MS.gene27093.t1 | AT4G16220 | 45.833 | 96 | 47 | 3 | 98 | 193 | 28 | 118 | 3.81e-13 | 68.9 |
| MS.gene27093.t1 | AT1G28570 | 28.472 | 288 | 140 | 12 | 98 | 336 | 32 | 302 | 4.33e-13 | 70.1 |
| MS.gene27093.t1 | AT1G28600 | 27.526 | 287 | 143 | 12 | 98 | 336 | 29 | 298 | 1.61e-12 | 68.6 |
| MS.gene27093.t1 | AT3G09930 | 26.087 | 253 | 151 | 7 | 101 | 331 | 40 | 278 | 2.09e-12 | 67.8 |
| MS.gene27093.t1 | AT3G09930 | 26.087 | 253 | 151 | 7 | 101 | 331 | 40 | 278 | 2.09e-12 | 67.8 |
| MS.gene27093.t1 | AT1G28610 | 32.195 | 205 | 101 | 9 | 98 | 275 | 29 | 222 | 2.39e-12 | 66.6 |
| MS.gene27093.t1 | AT5G14450 | 23.448 | 290 | 175 | 8 | 86 | 336 | 27 | 308 | 1.98e-11 | 65.1 |
Find 71 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGCTTCTAATTTCTTAA+AGG | 0.156477 | 1.1:-405917 | MS.gene27093:intron |
| TCCTGATTATGCTGATCTTA+TGG | 0.251081 | 1.1:-405944 | MS.gene27093:CDS |
| CATTGATGATGACATCTATT+TGG | 0.256445 | 1.1:-412118 | MS.gene27093:CDS |
| TCCTGCTGTTTGGATAATTC+TGG | 0.287953 | 1.1:+405353 | None:intergenic |
| AAATCACTGGGCTGGAGATT+TGG | 0.299729 | 1.1:+406344 | None:intergenic |
| GTTTGGATAATTCTGGTTAA+AGG | 0.300373 | 1.1:+405360 | None:intergenic |
| GTTCCAGCGGTGTTGGTGTT+TGG | 0.327564 | 1.1:-408129 | MS.gene27093:intron |
| ATCCTGGAATATCCTTGAAT+TGG | 0.345186 | 1.1:-413080 | MS.gene27093:CDS |
| GATCAGCAGCACCTTGTTCC+TGG | 0.353942 | 1.1:+412157 | None:intergenic |
| AGAATTTCTACCAGCATACT+TGG | 0.356901 | 1.1:-406369 | MS.gene27093:CDS |
| TTCTTTGTCTGTCCAATTCA+AGG | 0.357527 | 1.1:+413068 | None:intergenic |
| ATTGTAAACTCTAATAAATA+TGG | 0.372700 | 1.1:-405292 | MS.gene27093:CDS |
| CGCAAGCTCGGAAGGTGACT+TGG | 0.378300 | 1.1:+413113 | None:intergenic |
| CTACCTTTGCATAGAGTGTT+GGG | 0.378522 | 1.1:+412383 | None:intergenic |
| CCTTTGAAATCTTTCCCATA+AGG | 0.400518 | 1.1:+408039 | None:intergenic |
| GCTACCTTTGCATAGAGTGT+TGG | 0.405827 | 1.1:+412382 | None:intergenic |
| CTGTGGTCAGTTGAAGAATT+AGG | 0.406265 | 1.1:-406398 | MS.gene27093:intron |
| CAGTCAGCAATATCATTATC+TGG | 0.410346 | 1.1:-406132 | MS.gene27093:CDS |
| ACCATAAGATCAGCATAATC+AGG | 0.417873 | 1.1:+405943 | None:intergenic |
| GGAGATTCTATCGTGGATAC+AGG | 0.422024 | 1.1:-408108 | MS.gene27093:CDS |
| GGAAAATTAAGAGGACTTGT+TGG | 0.429168 | 1.1:-406081 | MS.gene27093:CDS |
| GTCCAATTCAAGGATATTCC+AGG | 0.431003 | 1.1:+413078 | None:intergenic |
| CATAATCAGGAAAATCATAC+TGG | 0.431311 | 1.1:+405956 | None:intergenic |
| ATGTAAACAATCCTGCTGTT+TGG | 0.434657 | 1.1:+405343 | None:intergenic |
| CCATTTCAGAGAACAGCTGC+TGG | 0.443466 | 1.1:-405463 | MS.gene27093:intron |
| TACAACAGCAAATTGTCAAA+GGG | 0.443709 | 1.1:-405391 | MS.gene27093:CDS |
| GCAAAGGTAGCAGCGAAGAT+AGG | 0.447979 | 1.1:-412370 | MS.gene27093:CDS |
| TTCAAAGGAGGGATTCCAAC+AGG | 0.451153 | 1.1:-408024 | MS.gene27093:CDS |
| CAGCCCAGTGATTTACCTAC+TGG | 0.453091 | 1.1:-406335 | MS.gene27093:CDS |
| ATTCTTTGAACAAATCTAGT+TGG | 0.462739 | 1.1:+406109 | None:intergenic |
| ACCAGAATTATCCAAACAGC+AGG | 0.467487 | 1.1:-405354 | MS.gene27093:CDS |
| AAAGTTCCCTCAGACTTCAT+AGG | 0.491281 | 1.1:-407985 | MS.gene27093:intron |
| TGTTTCAGTTCCAGCGGTGT+TGG | 0.492435 | 1.1:-408136 | MS.gene27093:intron |
| TTGAAATCTTTCCCATAAGG+TGG | 0.509489 | 1.1:+408042 | None:intergenic |
| CCATTGCTAAATCTTCCTGT+TGG | 0.510054 | 1.1:+408009 | None:intergenic |
| CTTGCGTTGAAGCTTAATCC+TGG | 0.518653 | 1.1:-413096 | MS.gene27093:CDS |
| GTCATCATCAATGTCCAACT+TGG | 0.520409 | 1.1:+412128 | None:intergenic |
| TCCTTTGACATCTCAAACTG+CGG | 0.523946 | 1.1:-406279 | MS.gene27093:intron |
| AGACAGAACAAACTTCATCT+TGG | 0.527036 | 1.1:-406055 | MS.gene27093:CDS |
| ATACAACAGCAAATTGTCAA+AGG | 0.532727 | 1.1:-405392 | MS.gene27093:CDS |
| AGCTTCAACGCAAGCTCGGA+AGG | 0.537948 | 1.1:+413105 | None:intergenic |
| GCTCGGAAGGTGACTTGGGA+GGG | 0.542391 | 1.1:+413118 | None:intergenic |
| GAATACATAGGAAAATTAAG+AGG | 0.545890 | 1.1:-406090 | MS.gene27093:CDS |
| GCGAGACAAGAAATATGTGT+TGG | 0.549615 | 1.1:+405990 | None:intergenic |
| GATGATGACATCTATTTGGA+AGG | 0.554196 | 1.1:-412114 | MS.gene27093:intron |
| CAGTAGGTAAATCACTGGGC+TGG | 0.554672 | 1.1:+406336 | None:intergenic |
| CACACCAGTAGGTAAATCAC+TGG | 0.556309 | 1.1:+406331 | None:intergenic |
| GCAAGCTCGGAAGGTGACTT+GGG | 0.558966 | 1.1:+413114 | None:intergenic |
| TATGGGAAAGATTTCAAAGG+AGG | 0.566990 | 1.1:-408036 | MS.gene27093:CDS |
| AGATTTGGATCCAAGTATGC+TGG | 0.578680 | 1.1:+406359 | None:intergenic |
| ATGGGAAAGATTTCAAAGGA+GGG | 0.579064 | 1.1:-408035 | MS.gene27093:CDS |
| AGCTCGGAAGGTGACTTGGG+AGG | 0.586238 | 1.1:+413117 | None:intergenic |
| TGTAGTACCTATGAAGTCTG+AGG | 0.593842 | 1.1:+407978 | None:intergenic |
| ATTAAGCTTCAACGCAAGCT+CGG | 0.597089 | 1.1:+413101 | None:intergenic |
| ATGTAGCACTACGAGTCAAG+TGG | 0.602557 | 1.1:-412330 | MS.gene27093:CDS |
| CAAGTGTTGGTATGGAGCAG+AGG | 0.603332 | 1.1:-413143 | None:intergenic |
| CCTTATGGGAAAGATTTCAA+AGG | 0.615497 | 1.1:-408039 | MS.gene27093:CDS |
| TTACAATGATGTCAAGCAGA+GGG | 0.617872 | 1.1:+405308 | None:intergenic |
| GATGCAAAACACACACCAGT+AGG | 0.626175 | 1.1:+406320 | None:intergenic |
| TGCTGATCTTGCAACCAAGT+TGG | 0.631418 | 1.1:-412142 | MS.gene27093:CDS |
| GATTTGTTCAAAGAATACAT+AGG | 0.632933 | 1.1:-406102 | MS.gene27093:CDS |
| CCAACAGGAAGATTTAGCAA+TGG | 0.634651 | 1.1:-408009 | MS.gene27093:CDS |
| TGGCCCAACACTCTATGCAA+AGG | 0.637467 | 1.1:-412386 | MS.gene27093:CDS |
| ACAACAGCAAATTGTCAAAG+GGG | 0.637819 | 1.1:-405390 | MS.gene27093:CDS |
| GTAGTACCTATGAAGTCTGA+GGG | 0.653162 | 1.1:+407979 | None:intergenic |
| TTTCAGAGAACAGCTGCTGG+AGG | 0.657240 | 1.1:-405460 | MS.gene27093:intron |
| TTTACAATGATGTCAAGCAG+AGG | 0.658645 | 1.1:+405307 | None:intergenic |
| ACCGCAGTTTGAGATGTCAA+AGG | 0.661904 | 1.1:+406278 | None:intergenic |
| CATTACTGCCCAATACCACA+AGG | 0.663942 | 1.1:+406019 | None:intergenic |
| GGTGTTTGGAGATTCTATCG+TGG | 0.689331 | 1.1:-408115 | MS.gene27093:CDS |
| ACACCAGTAGGTAAATCACT+GGG | 0.703062 | 1.1:+406332 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 405264 | 413154 | 405264 | ID=MS.gene27093 |
| chr1.1 | mRNA | 405264 | 413154 | 405264 | ID=MS.gene27093.t1;Parent=MS.gene27093 |
| chr1.1 | exon | 413039 | 413154 | 413039 | ID=MS.gene27093.t1.exon1;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 413039 | 413154 | 413039 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| chr1.1 | exon | 412324 | 412423 | 412324 | ID=MS.gene27093.t1.exon2;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 412324 | 412423 | 412324 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| chr1.1 | exon | 412115 | 412196 | 412115 | ID=MS.gene27093.t1.exon3;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 412115 | 412196 | 412115 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| chr1.1 | exon | 407986 | 408144 | 407986 | ID=MS.gene27093.t1.exon4;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 407986 | 408144 | 407986 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| chr1.1 | exon | 406280 | 406410 | 406280 | ID=MS.gene27093.t1.exon5;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 406280 | 406410 | 406280 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| chr1.1 | exon | 405918 | 406151 | 405918 | ID=MS.gene27093.t1.exon6;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 405918 | 406151 | 405918 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| chr1.1 | exon | 405264 | 405476 | 405264 | ID=MS.gene27093.t1.exon7;Parent=MS.gene27093.t1 |
| chr1.1 | CDS | 405264 | 405476 | 405264 | ID=cds.MS.gene27093.t1;Parent=MS.gene27093.t1 |
| Gene Sequence |
| Protein sequence |
