Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059922.t1 | XP_013457859.1 | 93.8 | 611 | 33 | 1 | 6 | 611 | 35 | 645 | 0.00E+00 | 1184.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059922.t1 | Q9SSG3 | 65.6 | 613 | 195 | 6 | 6 | 611 | 33 | 636 | 1.1e-241 | 837.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059922.t1 | A0A072V1D2 | 93.8 | 611 | 33 | 1 | 6 | 611 | 35 | 645 | 0.0e+00 | 1184.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059922 | MS.gene43216 | 0.829753 | 4.32E-55 | -1.69E-46 |
| MS.gene059922 | MS.gene58786 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene059922 | MS.gene59920 | 0.800971 | 1.12E-48 | -1.69E-46 |
| MS.gene059922 | MS.gene60310 | 0.831894 | 1.29E-55 | -1.69E-46 |
| MS.gene059922 | MS.gene60913 | 0.803137 | 4.02E-49 | -1.69E-46 |
| MS.gene059922 | MS.gene61919 | -0.800991 | 1.11E-48 | -1.69E-46 |
| MS.gene059922 | MS.gene90407 | 0.806235 | 9.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059922.t1 | MTR_4g107400 | 93.475 | 613 | 35 | 1 | 4 | 611 | 33 | 645 | 0.0 | 1146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059922.t1 | AT1G74790 | 65.579 | 613 | 195 | 6 | 6 | 611 | 33 | 636 | 0.0 | 816 |
| MS.gene059922.t1 | AT5G62630 | 59.516 | 620 | 223 | 8 | 6 | 611 | 34 | 639 | 0.0 | 732 |
| MS.gene059922.t1 | AT5G39970 | 55.592 | 617 | 246 | 10 | 6 | 610 | 34 | 634 | 0.0 | 696 |
| MS.gene059922.t1 | AT5G39970 | 55.592 | 617 | 246 | 10 | 6 | 610 | 21 | 621 | 0.0 | 695 |
| MS.gene059922.t1 | AT5G39970 | 55.390 | 538 | 215 | 9 | 6 | 534 | 34 | 555 | 0.0 | 612 |
Find 173 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTTCATTCTTGCTTAAT+TGG | 0.096251 | 8.1:+19445872 | None:intergenic |
| CGGCCATTGTTGGCAAAATT+TGG | 0.105870 | 8.1:+19447371 | None:intergenic |
| GAATTGGATTTATGGATTTA+AGG | 0.142580 | 8.1:+19445920 | None:intergenic |
| GGCTTATGCCTTGAGAAAAT+TGG | 0.146095 | 8.1:-19447602 | MS.gene059922:CDS |
| CAAGCAGTGATTTCTTGTTT+TGG | 0.219887 | 8.1:+19446903 | None:intergenic |
| ATCTTTACGCGGGTGCGCTT+TGG | 0.219972 | 8.1:-19444619 | MS.gene059922:CDS |
| GTAAACAGCTCGCCTGAATA+AGG | 0.226039 | 8.1:+19447956 | None:intergenic |
| AAAGCATACTAATTGATTAT+TGG | 0.228708 | 8.1:+19447676 | None:intergenic |
| AAGATCTGGAGCTTGAAATA+TGG | 0.273892 | 8.1:-19446509 | MS.gene059922:CDS |
| TAGAGGTGTGACCCTTATTC+AGG | 0.292454 | 8.1:-19447968 | MS.gene059922:CDS |
| ATGACTTCTGCTCTGAAGTA+TGG | 0.295903 | 8.1:-19447850 | MS.gene059922:CDS |
| CGAGTCAAATGGGGAAAGTT+TGG | 0.296402 | 8.1:-19447520 | MS.gene059922:CDS |
| GTTTATATTCTTGCAAGTTC+TGG | 0.302709 | 8.1:-19444437 | MS.gene059922:CDS |
| ATAATCAATTAGTATGCTTT+GGG | 0.303392 | 8.1:-19447673 | MS.gene059922:CDS |
| CTGAATTTGTCCATCTTGTA+TGG | 0.309177 | 8.1:+19448862 | None:intergenic |
| TCTTTACGCGGGTGCGCTTT+GGG | 0.310364 | 8.1:-19444618 | MS.gene059922:CDS |
| CCACCGTGTTGAGATGTAAA+TGG | 0.312281 | 8.1:+19447010 | None:intergenic |
| AATTGGATTTATGGATTTAA+GGG | 0.316481 | 8.1:+19445921 | None:intergenic |
| AATAATCAATTAGTATGCTT+TGG | 0.319182 | 8.1:-19447674 | MS.gene059922:CDS |
| TCCACTATTTGAAGGATATT+CGG | 0.319213 | 8.1:+19444589 | None:intergenic |
| TGTCCTCCTGATCCTTCTTC+AGG | 0.320055 | 8.1:+19447485 | None:intergenic |
| TCCTTCATTCTTGCTTAATT+GGG | 0.339044 | 8.1:+19445873 | None:intergenic |
| TTACTAGTACCTATCTTTGA+TGG | 0.350428 | 8.1:+19447263 | None:intergenic |
| TTATTCAGGCGAGCTGTTTA+CGG | 0.352655 | 8.1:-19447954 | MS.gene059922:CDS |
| ATCACAAAAGGTGGAAACTA+TGG | 0.353305 | 8.1:-19446006 | MS.gene059922:CDS |
| TTTATTTCTCAACACTGAAA+TGG | 0.354032 | 8.1:+19444020 | None:intergenic |
| GAATGGATCTTATCTCAATA+TGG | 0.354342 | 8.1:-19447579 | MS.gene059922:CDS |
| CACGGTGGTCAGATACTCTT+TGG | 0.356198 | 8.1:-19446995 | MS.gene059922:CDS |
| TGATACTCAATTTGGAATGA+TGG | 0.358990 | 8.1:-19447408 | MS.gene059922:CDS |
| CTATGGCTGGCGTGTATATG+AGG | 0.364427 | 8.1:-19445989 | MS.gene059922:CDS |
| GCTTTGCAATTCTGCCATTC+CGG | 0.368813 | 8.1:-19447903 | MS.gene059922:CDS |
| ATGACTGATCCTTGCATGTT+TGG | 0.370498 | 8.1:-19445814 | MS.gene059922:CDS |
| TTAACTGTAATAAAGATAAA+TGG | 0.372614 | 8.1:-19447334 | MS.gene059922:CDS |
| GGTGAGAAGAATATTTACTA+TGG | 0.376153 | 8.1:-19447038 | MS.gene059922:CDS |
| GAAGGATCGGCATCAATTAC+CGG | 0.379108 | 8.1:-19445856 | MS.gene059922:CDS |
| GCTTATGCCTTGAGAAAATT+GGG | 0.396776 | 8.1:-19447601 | MS.gene059922:CDS |
| CATTCTTGCTTAATTGGGAA+TGG | 0.399451 | 8.1:+19445878 | None:intergenic |
| AAGAGCTGGAAGGGAGCTAC+TGG | 0.401179 | 8.1:+19444499 | None:intergenic |
| ACGTATAAATACCCATCATT+AGG | 0.411408 | 8.1:+19446971 | None:intergenic |
| CGCGTTCTTCTCGAGTCAAA+TGG | 0.413111 | 8.1:-19447531 | MS.gene059922:CDS |
| ACCGAATATCCTTCAAATAG+TGG | 0.413251 | 8.1:-19444590 | MS.gene059922:CDS |
| AGAAGGATCAGGAGGACAAT+TGG | 0.415576 | 8.1:-19447480 | MS.gene059922:CDS |
| GTGAAATTTCCACTATTTGA+AGG | 0.416846 | 8.1:+19444581 | None:intergenic |
| GAGCTTGAAATATGGGCCTT+AGG | 0.418744 | 8.1:-19446501 | MS.gene059922:CDS |
| ATTGCAGAATATACTGCTAA+TGG | 0.420026 | 8.1:-19447209 | MS.gene059922:CDS |
| AGTAGCTCCCTTCCAGCTCT+TGG | 0.420155 | 8.1:-19444497 | MS.gene059922:CDS |
| AAATGCGTACCGAGGATGGC+TGG | 0.424046 | 8.1:+19447177 | None:intergenic |
| TCATTGTTGCGTAATGCAAC+AGG | 0.424623 | 8.1:+19447644 | None:intergenic |
| TCCACCTCCTTGACCTTGTA+AGG | 0.435850 | 8.1:+19447781 | None:intergenic |
| AGATCTGGAGCTTGAAATAT+GGG | 0.438318 | 8.1:-19446508 | MS.gene059922:CDS |
| TGTAATAAAGATAAATGGTC+TGG | 0.438396 | 8.1:-19447329 | MS.gene059922:CDS |
| CACTGCTTGGAAAGGTTATG+AGG | 0.441646 | 8.1:-19446889 | MS.gene059922:CDS |
| CAAGTACTTCCATTGTTGTA+AGG | 0.443580 | 8.1:+19448893 | None:intergenic |
| GGAATGGTTGTATCCTGCTA+TGG | 0.444161 | 8.1:+19445894 | None:intergenic |
| TTTGATTGAGAAGAATTTGC+CGG | 0.444403 | 8.1:+19447884 | None:intergenic |
| AGTTAAACGAAGCGAAGAAT+CGG | 0.448068 | 8.1:+19447351 | None:intergenic |
| AGTGTGGTATTCAAGGTAAA+GGG | 0.451601 | 8.1:+19448926 | None:intergenic |
| TTCATTCAGTGTGGTTGCAT+TGG | 0.458561 | 8.1:+19447745 | None:intergenic |
| ATGGGAGATGGAGGAGGTAC+AGG | 0.459539 | 8.1:-19446944 | MS.gene059922:CDS |
| GAATGGTTGTATCCTGCTAT+GGG | 0.460676 | 8.1:+19445895 | None:intergenic |
| TAAACAGCTCGCCTGAATAA+GGG | 0.463660 | 8.1:+19447957 | None:intergenic |
| GCGTTCTTCTCGAGTCAAAT+GGG | 0.465575 | 8.1:-19447530 | MS.gene059922:CDS |
| GAGTGTGGTATTCAAGGTAA+AGG | 0.466980 | 8.1:+19448925 | None:intergenic |
| GATACTCAATTTGGAATGAT+GGG | 0.468125 | 8.1:-19447407 | MS.gene059922:CDS |
| AAATTTGAGTGTGGTATTCA+AGG | 0.469405 | 8.1:+19448919 | None:intergenic |
| AATTGTGATCCATCAAAGAT+AGG | 0.471816 | 8.1:-19447272 | MS.gene059922:CDS |
| AGTTATTACACTTACACAAA+AGG | 0.477314 | 8.1:+19444145 | None:intergenic |
| GGCAAATTCTTCTCAATCAA+AGG | 0.479253 | 8.1:-19447882 | MS.gene059922:CDS |
| ATACTCTTTGGACCTAATGA+TGG | 0.480182 | 8.1:-19446983 | MS.gene059922:CDS |
| CCAAGGATTTCTTAATCCTA+AGG | 0.484371 | 8.1:+19446485 | None:intergenic |
| AGCGAAGAATCGGCCATTGT+TGG | 0.487534 | 8.1:+19447361 | None:intergenic |
| GATAAATGGTCTGGCTGCAA+TGG | 0.494029 | 8.1:-19447320 | MS.gene059922:CDS |
| AATCGTGTGCACAGCTGAAA+GGG | 0.494341 | 8.1:+19444546 | None:intergenic |
| GGATTTATGGATTTAAGGGA+TGG | 0.494967 | 8.1:+19445925 | None:intergenic |
| CACCGGGTCCCAGCCATCCT+CGG | 0.497508 | 8.1:-19447186 | MS.gene059922:intron |
| TATCAGATACATTCATCTGT+TGG | 0.497663 | 8.1:+19448831 | None:intergenic |
| AATATTCTTCTCACCTCAGT+TGG | 0.498059 | 8.1:+19447046 | None:intergenic |
| CAATAGTGAAGATAAAGATC+TGG | 0.506021 | 8.1:-19446523 | MS.gene059922:CDS |
| GAAAAGATGTATCCAAGAGC+TGG | 0.508362 | 8.1:+19444485 | None:intergenic |
| AACGCGCGATTTGAGCCATC+AGG | 0.508629 | 8.1:+19447548 | None:intergenic |
| GAATATACTGCTAATGGCAC+CGG | 0.510299 | 8.1:-19447203 | MS.gene059922:CDS |
| TCCTTACAAGGTCAAGGAGG+TGG | 0.512557 | 8.1:-19447782 | MS.gene059922:CDS |
| TGATTTCAAAAGTGAGGCAC+AGG | 0.514224 | 8.1:+19448805 | None:intergenic |
| GGTGACTCTGTAGTAGTGAA+TGG | 0.514388 | 8.1:+19445958 | None:intergenic |
| TTAAGGGATGGATTTCCTCC+AGG | 0.520601 | 8.1:+19445937 | None:intergenic |
| TTGAGAAGAATTTGCCGGAA+TGG | 0.521295 | 8.1:+19447889 | None:intergenic |
| TTGGCAACTATTCCTGAAGA+AGG | 0.522185 | 8.1:-19447497 | MS.gene059922:CDS |
| ACTATTCCTGAAGAAGGATC+AGG | 0.522978 | 8.1:-19447491 | MS.gene059922:CDS |
| AATATGGTTGCTCATCCTGA+TGG | 0.523113 | 8.1:-19447563 | MS.gene059922:CDS |
| TGCCTTGAGAAAATTGGGAA+TGG | 0.524502 | 8.1:-19447596 | MS.gene059922:CDS |
| CCTTAGGATTAAGAAATCCT+TGG | 0.528645 | 8.1:-19446485 | MS.gene059922:CDS |
| TTTCTCAAGGCATAAGCCAT+GGG | 0.529664 | 8.1:+19447607 | None:intergenic |
| ATCAATTAGTATGCTTTGGG+GGG | 0.533090 | 8.1:-19447670 | MS.gene059922:CDS |
| CAAAGCACAGGAACTGATCT+CGG | 0.534924 | 8.1:+19447920 | None:intergenic |
| ATGGTTGTATCCTGCTATGG+GGG | 0.535626 | 8.1:+19445897 | None:intergenic |
| CACCGTGTTGAGATGTAAAT+GGG | 0.536248 | 8.1:+19447011 | None:intergenic |
| GAGGTGGATCTCATCACAAA+AGG | 0.536322 | 8.1:-19446018 | MS.gene059922:CDS |
| TGGGTATTTATACGTCATGA+TGG | 0.540047 | 8.1:-19446963 | MS.gene059922:CDS |
| TACCGAGGATGGCTGGGACC+CGG | 0.540836 | 8.1:+19447184 | None:intergenic |
| CCGCGTAAAGATCAGCATAC+AGG | 0.543963 | 8.1:+19444630 | None:intergenic |
| GTGGTTGCATTGGTATTAGC+TGG | 0.548104 | 8.1:+19447755 | None:intergenic |
| CAAAACAAGAAATCACTGCT+TGG | 0.552540 | 8.1:-19446902 | MS.gene059922:CDS |
| GGTGCTGAATCACACAGTAT+AGG | 0.552808 | 8.1:+19444521 | None:intergenic |
| TTCTTCTCAATCAAAGGCAT+CGG | 0.554545 | 8.1:-19447876 | MS.gene059922:CDS |
| GATGTATCCAAGAGCTGGAA+GGG | 0.554726 | 8.1:+19444490 | None:intergenic |
| GAATCGTGTGCACAGCTGAA+AGG | 0.555049 | 8.1:+19444545 | None:intergenic |
| AAGGATCGGCATCAATTACC+GGG | 0.556988 | 8.1:-19445855 | MS.gene059922:CDS |
| CCTCCTTGACCTTGTAAGGA+GGG | 0.557442 | 8.1:+19447785 | None:intergenic |
| GCAGGATCTTTATGAAGAGG+TGG | 0.561327 | 8.1:-19446034 | MS.gene059922:intron |
| TGACTTCTGCTCTGAAGTAT+GGG | 0.561516 | 8.1:-19447849 | MS.gene059922:CDS |
| TCAAATGGGGAAAGTTTGGT+TGG | 0.561969 | 8.1:-19447516 | MS.gene059922:CDS |
| TCAAAGATAGGTACTAGTAA+TGG | 0.562846 | 8.1:-19447260 | MS.gene059922:CDS |
| TGCTGCAATTCCATACAAGA+TGG | 0.564723 | 8.1:-19448872 | MS.gene059922:CDS |
| AATGCGTACCGAGGATGGCT+GGG | 0.565129 | 8.1:+19447178 | None:intergenic |
| TCCCAATTAAGCAAGAATGA+AGG | 0.566667 | 8.1:-19445874 | MS.gene059922:CDS |
| CTCCTTGACCTTGTAAGGAG+GGG | 0.567764 | 8.1:+19447786 | None:intergenic |
| TTATACGTCATGATGGGAGA+TGG | 0.568302 | 8.1:-19446956 | MS.gene059922:CDS |
| TACTCTTTGGACCTAATGAT+GGG | 0.568455 | 8.1:-19446982 | MS.gene059922:CDS |
| CTGATCCTTGCATGTTTGGA+AGG | 0.568512 | 8.1:-19445810 | MS.gene059922:intron |
| ATGGCAGAATTGCAAAGCAC+AGG | 0.569332 | 8.1:+19447908 | None:intergenic |
| TCCTTGACCTTGTAAGGAGG+GGG | 0.573937 | 8.1:+19447787 | None:intergenic |
| GTGAGAAGAATATTTACTAT+GGG | 0.574327 | 8.1:-19447037 | MS.gene059922:CDS |
| CAAAAGGTGGAAACTATGGC+TGG | 0.578685 | 8.1:-19446002 | MS.gene059922:CDS |
| CAAGAAATCACTGCTTGGAA+AGG | 0.578885 | 8.1:-19446897 | MS.gene059922:CDS |
| TGATCAGTTAGATCAACAAA+GGG | 0.581281 | 8.1:+19447440 | None:intergenic |
| TTTGCAGGATCTTTATGAAG+AGG | 0.581556 | 8.1:-19446037 | MS.gene059922:intron |
| ACCTCCTTGACCTTGTAAGG+AGG | 0.585742 | 8.1:+19447784 | None:intergenic |
| TTGATCAGTTAGATCAACAA+AGG | 0.586446 | 8.1:+19447439 | None:intergenic |
| AATCAATTAGTATGCTTTGG+GGG | 0.587339 | 8.1:-19447671 | MS.gene059922:CDS |
| CCTGTATGCTGATCTTTACG+CGG | 0.587393 | 8.1:-19444630 | MS.gene059922:CDS |
| AAATATAATTGTCAATAGTG+AGG | 0.588767 | 8.1:+19446548 | None:intergenic |
| TCAATTAGTATGCTTTGGGG+GGG | 0.591950 | 8.1:-19447669 | MS.gene059922:CDS |
| AATGGTTGTATCCTGCTATG+GGG | 0.592212 | 8.1:+19445896 | None:intergenic |
| GGGTATTTATACGTCATGAT+GGG | 0.593049 | 8.1:-19446962 | MS.gene059922:CDS |
| TTTGAAATCAATACTTTGTG+CGG | 0.598518 | 8.1:-19448792 | MS.gene059922:intron |
| GTCATGATGGGAGATGGAGG+AGG | 0.601408 | 8.1:-19446950 | MS.gene059922:CDS |
| AAGTATTGATTTCAAAAGTG+AGG | 0.602252 | 8.1:+19448799 | None:intergenic |
| AAACATGCAAGGATCAGTCA+TGG | 0.603030 | 8.1:+19445816 | None:intergenic |
| TAATCAATTAGTATGCTTTG+GGG | 0.613379 | 8.1:-19447672 | MS.gene059922:CDS |
| GTGGATCTCATCACAAAAGG+TGG | 0.614554 | 8.1:-19446015 | MS.gene059922:CDS |
| TATGGCTGGCGTGTATATGA+GGG | 0.615153 | 8.1:-19445988 | MS.gene059922:CDS |
| AGATGTATCCAAGAGCTGGA+AGG | 0.615410 | 8.1:+19444489 | None:intergenic |
| AATATACTGCTAATGGCACC+GGG | 0.617544 | 8.1:-19447202 | MS.gene059922:CDS |
| GAATCAAAACTGCATCGCCA+AGG | 0.619294 | 8.1:+19446468 | None:intergenic |
| TCAAGGCATAAGCCATGGGG+AGG | 0.619341 | 8.1:+19447611 | None:intergenic |
| ATTAAGCAAGAATGAAGGAT+CGG | 0.620305 | 8.1:-19445869 | MS.gene059922:CDS |
| TTCACTACTACAGAGTCACC+TGG | 0.628037 | 8.1:-19445955 | MS.gene059922:CDS |
| TACGTCATGATGGGAGATGG+AGG | 0.628503 | 8.1:-19446953 | MS.gene059922:CDS |
| CAGTACCTTCCAAACATGCA+AGG | 0.628525 | 8.1:+19445805 | None:intergenic |
| AGAGCTGGAAGGGAGCTACT+GGG | 0.631308 | 8.1:+19444500 | None:intergenic |
| GTAGAAATGCGTACCGAGGA+TGG | 0.634150 | 8.1:+19447173 | None:intergenic |
| CAAGGCATAAGCCATGGGGA+GGG | 0.635947 | 8.1:+19447612 | None:intergenic |
| GTAAGGACAAAATTTGAGTG+TGG | 0.639534 | 8.1:+19448910 | None:intergenic |
| GAGACTATTATCCCTCCCCA+TGG | 0.639990 | 8.1:-19447623 | MS.gene059922:CDS |
| TGGTTGTATCCTGCTATGGG+GGG | 0.641288 | 8.1:+19445898 | None:intergenic |
| TTGCCACAGTTCATTCAGTG+TGG | 0.643952 | 8.1:+19447736 | None:intergenic |
| CTGTATGCTGATCTTTACGC+GGG | 0.649982 | 8.1:-19444629 | MS.gene059922:CDS |
| GGATCGATAAACATATCCCC+CGG | 0.650551 | 8.1:+19445837 | None:intergenic |
| CTCCCATTTACATCTCAACA+CGG | 0.653139 | 8.1:-19447013 | MS.gene059922:CDS |
| ACTATTTGAAGGATATTCGG+TGG | 0.654468 | 8.1:+19444592 | None:intergenic |
| CGTTCTTCTCGAGTCAAATG+GGG | 0.658120 | 8.1:-19447529 | MS.gene059922:CDS |
| CCCTCCTTACAAGGTCAAGG+AGG | 0.662761 | 8.1:-19447785 | MS.gene059922:CDS |
| ATTCCTGAAGAAGGATCAGG+AGG | 0.666234 | 8.1:-19447488 | MS.gene059922:CDS |
| TACAAGTGCTAAACCAACTG+AGG | 0.669482 | 8.1:-19447059 | MS.gene059922:CDS |
| TTCTCAAGGCATAAGCCATG+GGG | 0.670920 | 8.1:+19447608 | None:intergenic |
| GTGGTATTCAAGGTAAAGGG+TGG | 0.672703 | 8.1:+19448929 | None:intergenic |
| CACAGGAACTGATCTCGGTG+TGG | 0.676158 | 8.1:+19447925 | None:intergenic |
| ATAACAGTTTGATATTGACA+CGG | 0.693697 | 8.1:+19447230 | None:intergenic |
| AGGATCGGCATCAATTACCG+GGG | 0.697871 | 8.1:-19445854 | MS.gene059922:CDS |
| GGATCGGCATCAATTACCGG+GGG | 0.706898 | 8.1:-19445853 | MS.gene059922:CDS |
| CAACCACACTGAATGAACTG+TGG | 0.737606 | 8.1:-19447739 | MS.gene059922:CDS |
| ACTACTACAGAGTCACCTGG+AGG | 0.758418 | 8.1:-19445952 | MS.gene059922:CDS |
| CCATTTACATCTCAACACGG+TGG | 0.793402 | 8.1:-19447010 | MS.gene059922:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACTACTCATAAAAATTT+GGG | + | chr8.1:19447964-19447983 | None:intergenic | 15.0% |
| !! | TTAACTGTAATAAAGATAAA+TGG | - | chr8.1:19445628-19445647 | MS.gene059922:intron | 15.0% |
| !! | TTTAACTACTCATAAAAATT+TGG | + | chr8.1:19447965-19447984 | None:intergenic | 15.0% |
| !!! | AAAGAAAAAGTATATATTCA+AGG | - | chr8.1:19444240-19444259 | MS.gene059922:intron | 15.0% |
| !!! | CAATTGATAGTTATTAATAA+GGG | + | chr8.1:19444474-19444493 | None:intergenic | 15.0% |
| !!! | GATAAACAAATCTTTTAAAA+GGG | + | chr8.1:19444395-19444414 | None:intergenic | 15.0% |
| !!! | TGAATATATACTTTTTCTTT+AGG | + | chr8.1:19444240-19444259 | None:intergenic | 15.0% |
| !! | AAACTATTGTTTCATATGTA+TGG | + | chr8.1:19445816-19445835 | None:intergenic | 20.0% |
| !! | AAAGCATACTAATTGATTAT+TGG | + | chr8.1:19445289-19445308 | None:intergenic | 20.0% |
| !! | AAATATAATTGTCAATAGTG+AGG | + | chr8.1:19446417-19446436 | None:intergenic | 20.0% |
| !! | AATAATCAATTAGTATGCTT+TGG | - | chr8.1:19445288-19445307 | MS.gene059922:intron | 20.0% |
| !! | AATAGTTTGAGAAAATAGAA+TGG | + | chr8.1:19446185-19446204 | None:intergenic | 20.0% |
| !! | AATTGGATTTATGGATTTAA+GGG | + | chr8.1:19447044-19447063 | None:intergenic | 20.0% |
| !! | ATAATCAATTAGTATGCTTT+GGG | - | chr8.1:19445289-19445308 | MS.gene059922:intron | 20.0% |
| !! | ATGAAACAATAGTTTCTAAA+AGG | - | chr8.1:19445821-19445840 | MS.gene059922:CDS | 20.0% |
| !! | CCTTATTAATAACTATCAAT+TGG | - | chr8.1:19444472-19444491 | MS.gene059922:CDS | 20.0% |
| !! | TAAAATGTTCTACCAATAAT+TGG | - | chr8.1:19446296-19446315 | MS.gene059922:intron | 20.0% |
| !! | TAGAACTATCTAATCATTAT+CGG | - | chr8.1:19445870-19445889 | MS.gene059922:CDS | 20.0% |
| !! | TGTAATAACTAGTATATAAG+TGG | - | chr8.1:19448830-19448849 | MS.gene059922:CDS | 20.0% |
| !! | TTATTAAAAGTTTATGACTG+AGG | + | chr8.1:19446856-19446875 | None:intergenic | 20.0% |
| !! | TTATTAATAAGGGATGTATT+TGG | + | chr8.1:19444464-19444483 | None:intergenic | 20.0% |
| !!! | AACTTTTAATAACTTCTACA+AGG | - | chr8.1:19446864-19446883 | MS.gene059922:intron | 20.0% |
| !!! | ATTCTTTTTGTTCTCTTAAA+CGG | + | chr8.1:19446795-19446814 | None:intergenic | 20.0% |
| !!! | ATTTGTACAGTCTTATATTA+AGG | + | chr8.1:19444418-19444437 | None:intergenic | 20.0% |
| !!! | CCAATTGATAGTTATTAATA+AGG | + | chr8.1:19444475-19444494 | None:intergenic | 20.0% |
| !!! | GATTCTAAAATACTACAAAT+TGG | - | chr8.1:19448858-19448877 | MS.gene059922:CDS | 20.0% |
| !!! | GGATAAACAAATCTTTTAAA+AGG | + | chr8.1:19444396-19444415 | None:intergenic | 20.0% |
| !!! | GTTTATTTTGATACTCAATT+TGG | - | chr8.1:19445546-19445565 | MS.gene059922:intron | 20.0% |
| !!! | TCATCTTAAAAATTTTGGTT+AGG | + | chr8.1:19447858-19447877 | None:intergenic | 20.0% |
| !!! | TGAACTCATCTTAAAAATTT+TGG | + | chr8.1:19447863-19447882 | None:intergenic | 20.0% |
| !!! | TTGGTAGAACATTTTATAAA+AGG | + | chr8.1:19446292-19446311 | None:intergenic | 20.0% |
| !!! | TTTGTACAGTCTTATATTAA+GGG | + | chr8.1:19444417-19444436 | None:intergenic | 20.0% |
| ! | AAATATAGAACTCTTTGATG+AGG | - | chr8.1:19447997-19448016 | MS.gene059922:intron | 25.0% |
| ! | AAATTAGGGTTAATGAAACA+TGG | - | chr8.1:19446648-19446667 | MS.gene059922:intron | 25.0% |
| ! | AAGTAATGGTTAATGAAACT+CGG | + | chr8.1:19446722-19446741 | None:intergenic | 25.0% |
| ! | ACAAATTGGTCATATCAATT+TGG | - | chr8.1:19448872-19448891 | MS.gene059922:CDS | 25.0% |
| ! | AGTTATTACACTTACACAAA+AGG | + | chr8.1:19448820-19448839 | None:intergenic | 25.0% |
| ! | ATAACAGTTTGATATTGACA+CGG | + | chr8.1:19445735-19445754 | None:intergenic | 25.0% |
| ! | ATAACTAGTATATAAGTGGA+TGG | - | chr8.1:19448834-19448853 | MS.gene059922:CDS | 25.0% |
| ! | ATATGCATAAAAAGTTCCAA+AGG | - | chr8.1:19444601-19444620 | MS.gene059922:CDS | 25.0% |
| ! | ATTGTTGAACTGAAAAAAAG+TGG | + | chr8.1:19444932-19444951 | None:intergenic | 25.0% |
| ! | CTAGATTCTATTCATCTATA+TGG | + | chr8.1:19446337-19446356 | None:intergenic | 25.0% |
| ! | GAATTGGATTTATGGATTTA+AGG | + | chr8.1:19447045-19447064 | None:intergenic | 25.0% |
| ! | GATAACATGTTAAATATGCT+TGG | + | chr8.1:19447429-19447448 | None:intergenic | 25.0% |
| ! | GTGAGAAGAATATTTACTAT+GGG | - | chr8.1:19445925-19445944 | MS.gene059922:CDS | 25.0% |
| ! | TAATATGAAAAACCAGATGA+AGG | + | chr8.1:19447206-19447225 | None:intergenic | 25.0% |
| ! | TAATCAATTAGTATGCTTTG+GGG | - | chr8.1:19445290-19445309 | MS.gene059922:intron | 25.0% |
| ! | TATGCATAAAAAGTTCCAAA+GGG | - | chr8.1:19444602-19444621 | MS.gene059922:CDS | 25.0% |
| ! | TGTAATAAAGATAAATGGTC+TGG | - | chr8.1:19445633-19445652 | MS.gene059922:intron | 25.0% |
| ! | TTCCTATAAAAGAAACTTAC+CGG | + | chr8.1:19444322-19444341 | None:intergenic | 25.0% |
| !! | AAATTTTGTCCTTACAACAA+TGG | - | chr8.1:19444060-19444079 | MS.gene059922:CDS | 25.0% |
| !! | CTATTTTCTCAAACTATTAC+CGG | - | chr8.1:19446187-19446206 | MS.gene059922:intron | 25.0% |
| !! | TTGGATACATCTTTTCATTT+GGG | - | chr8.1:19448484-19448503 | MS.gene059922:intron | 25.0% |
| !! | TTTGAAATCAATACTTTGTG+CGG | - | chr8.1:19444170-19444189 | MS.gene059922:CDS | 25.0% |
| !!! | AACGATTTTTGTAAAGCATT+TGG | - | chr8.1:19445255-19445274 | MS.gene059922:intron | 25.0% |
| !!! | AAGTATTGATTTCAAAAGTG+AGG | + | chr8.1:19444166-19444185 | None:intergenic | 25.0% |
| !!! | TTGTTTTGGGAAAAATTGTA+TGG | + | chr8.1:19446048-19446067 | None:intergenic | 25.0% |
| AAATTTGAGTGTGGTATTCA+AGG | + | chr8.1:19444046-19444065 | None:intergenic | 30.0% | |
| AACATCTCCACAAAAAAAGT+AGG | + | chr8.1:19446531-19446550 | None:intergenic | 30.0% | |
| AACTGAAAAAAAGTGGTTAC+TGG | + | chr8.1:19444925-19444944 | None:intergenic | 30.0% | |
| AATCAATTAGTATGCTTTGG+GGG | - | chr8.1:19445291-19445310 | MS.gene059922:intron | 30.0% | |
| AATTGTGATCCATCAAAGAT+AGG | - | chr8.1:19445690-19445709 | MS.gene059922:intron | 30.0% | |
| ACGTATAAATACCCATCATT+AGG | + | chr8.1:19445994-19446013 | None:intergenic | 30.0% | |
| ATAATTGGTCAAACAAATGC+TGG | - | chr8.1:19446311-19446330 | MS.gene059922:intron | 30.0% | |
| ATCCTTCATTCTTGCTTAAT+TGG | + | chr8.1:19447093-19447112 | None:intergenic | 30.0% | |
| ATTAAGCAAGAATGAAGGAT+CGG | - | chr8.1:19447093-19447112 | MS.gene059922:intron | 30.0% | |
| ATTGCAGAATATACTGCTAA+TGG | - | chr8.1:19445753-19445772 | MS.gene059922:intron | 30.0% | |
| ATTTAACATGTTATCAGAGC+CGG | - | chr8.1:19447434-19447453 | MS.gene059922:CDS | 30.0% | |
| CAAAACCAACTTCAACAAAA+GGG | + | chr8.1:19447296-19447315 | None:intergenic | 30.0% | |
| CAATAGTGAAGATAAAGATC+TGG | - | chr8.1:19446439-19446458 | MS.gene059922:CDS | 30.0% | |
| CAATCTAAGTCACGATATAA+AGG | + | chr8.1:19444869-19444888 | None:intergenic | 30.0% | |
| GAATGGATCTTATCTCAATA+TGG | - | chr8.1:19445383-19445402 | MS.gene059922:intron | 30.0% | |
| GCATTTGTTTGACCAATTAT+TGG | + | chr8.1:19446311-19446330 | None:intergenic | 30.0% | |
| GGTGAGAAGAATATTTACTA+TGG | - | chr8.1:19445924-19445943 | MS.gene059922:CDS | 30.0% | |
| GTGAAATTTCCACTATTTGA+AGG | + | chr8.1:19448384-19448403 | None:intergenic | 30.0% | |
| GTTTATATTCTTGCAAGTTC+TGG | - | chr8.1:19448525-19448544 | MS.gene059922:intron | 30.0% | |
| TACTCATAAAAATTTGGGCT+GGG | + | chr8.1:19447959-19447978 | None:intergenic | 30.0% | |
| TATCAGATACATTCATCTGT+TGG | + | chr8.1:19444134-19444153 | None:intergenic | 30.0% | |
| TCAAAACCAACTTCAACAAA+AGG | + | chr8.1:19447297-19447316 | None:intergenic | 30.0% | |
| TCAAAGATAGGTACTAGTAA+TGG | - | chr8.1:19445702-19445721 | MS.gene059922:intron | 30.0% | |
| TCCACTATTTGAAGGATATT+CGG | + | chr8.1:19448376-19448395 | None:intergenic | 30.0% | |
| TCCTTCATTCTTGCTTAATT+GGG | + | chr8.1:19447092-19447111 | None:intergenic | 30.0% | |
| TCTATCTAAATTCTGTCACT+CGG | - | chr8.1:19447886-19447905 | MS.gene059922:CDS | 30.0% | |
| TGAACACACTTATACACAAA+AGG | - | chr8.1:19444519-19444538 | MS.gene059922:CDS | 30.0% | |
| TGATCAGTTAGATCAACAAA+GGG | + | chr8.1:19445525-19445544 | None:intergenic | 30.0% | |
| TGGGTCAAAAAAATTTGGTT+AGG | + | chr8.1:19447663-19447682 | None:intergenic | 30.0% | |
| TTAAACGGTTATACATCCAT+TGG | + | chr8.1:19446780-19446799 | None:intergenic | 30.0% | |
| TTACTAGTACCTATCTTTGA+TGG | + | chr8.1:19445702-19445721 | None:intergenic | 30.0% | |
| TTGATCAGTTAGATCAACAA+AGG | + | chr8.1:19445526-19445545 | None:intergenic | 30.0% | |
| TTTGATTGAGAAGAATTTGC+CGG | + | chr8.1:19445081-19445100 | None:intergenic | 30.0% | |
| ! | AAAACATCGGTTACTAGTAT+AGG | + | chr8.1:19444737-19444756 | None:intergenic | 30.0% |
| ! | AAGCCTTTTCTTTTCCTTTT+TGG | - | chr8.1:19447180-19447199 | MS.gene059922:intron | 30.0% |
| ! | ACAACTGCGATTTAAAACAT+CGG | + | chr8.1:19444750-19444769 | None:intergenic | 30.0% |
| ! | AGTTAAGGACGTTTGAAATT+AGG | - | chr8.1:19446633-19446652 | MS.gene059922:intron | 30.0% |
| ! | CTAACTTTGTTTGTTTGTAG+AGG | - | chr8.1:19444977-19444996 | MS.gene059922:intron | 30.0% |
| ! | CTAATCATTATCGGATTTTC+AGG | - | chr8.1:19445879-19445898 | MS.gene059922:CDS | 30.0% |
| ! | CTTGGATACATCTTTTCATT+TGG | - | chr8.1:19448483-19448502 | MS.gene059922:intron | 30.0% |
| ! | GATACTCAATTTGGAATGAT+GGG | - | chr8.1:19445555-19445574 | MS.gene059922:intron | 30.0% |
| ! | GTTAAGGACGTTTGAAATTA+GGG | - | chr8.1:19446634-19446653 | MS.gene059922:intron | 30.0% |
| ! | TCCAAAGGGTCTTATAAATA+GGG | - | chr8.1:19444616-19444635 | MS.gene059922:CDS | 30.0% |
| ! | TGATACTCAATTTGGAATGA+TGG | - | chr8.1:19445554-19445573 | MS.gene059922:intron | 30.0% |
| ! | TTCCAAAGGGTCTTATAAAT+AGG | - | chr8.1:19444615-19444634 | MS.gene059922:CDS | 30.0% |
| !! | CTAAAAGGTGTTTAATTCAG+TGG | - | chr8.1:19445836-19445855 | MS.gene059922:CDS | 30.0% |
| !! | GATTTTTGTAAAGCATTTGG+TGG | - | chr8.1:19445258-19445277 | MS.gene059922:intron | 30.0% |
| !! | GTTGATAATGAACGAAGTAA+TGG | + | chr8.1:19446736-19446755 | None:intergenic | 30.0% |
| !! | TAGTTACACAATTGATTTGC+AGG | - | chr8.1:19446910-19446929 | MS.gene059922:CDS | 30.0% |
| !! | TATGAGTTGTTTCTCATTGA+GGG | - | chr8.1:19448100-19448119 | MS.gene059922:intron | 30.0% |
| !! | TTATGAGTTGTTTCTCATTG+AGG | - | chr8.1:19448099-19448118 | MS.gene059922:intron | 30.0% |
| !!! | AAACCTTCCTACTTTTTTTG+TGG | - | chr8.1:19446521-19446540 | MS.gene059922:CDS | 30.0% |
| !!! | AAGCAGTGATTTCTTGTTTT+GGG | + | chr8.1:19446061-19446080 | None:intergenic | 30.0% |
| !!! | CTTTTATAGGAAAGTGTTTG+TGG | - | chr8.1:19444330-19444349 | MS.gene059922:intron | 30.0% |
| !!! | GGACTTATTTTAAAACGCTT+TGG | - | chr8.1:19448296-19448315 | MS.gene059922:intron | 30.0% |
| !!! | TAACCAAATTTTTTTGACCC+AGG | - | chr8.1:19447662-19447681 | MS.gene059922:CDS | 30.0% |
| !!! | TACTTTTTTTGTGGAGATGT+TGG | - | chr8.1:19446530-19446549 | MS.gene059922:CDS | 30.0% |
| AAATCAATACTTTGTGCGGT+AGG | - | chr8.1:19444174-19444193 | MS.gene059922:CDS | 35.0% | |
| AAATGAAGCTTGTAAGGTGA+AGG | + | chr8.1:19447624-19447643 | None:intergenic | 35.0% | |
| AAGTGTTTGTACTACTCACT+TGG | + | chr8.1:19446117-19446136 | None:intergenic | 35.0% | |
| AAGTTAGCTAGCTACATACA+AGG | + | chr8.1:19444964-19444983 | None:intergenic | 35.0% | |
| AATATTCTTCTCACCTCAGT+TGG | + | chr8.1:19445919-19445938 | None:intergenic | 35.0% | |
| AATTTATACAATCGACAGCC+CGG | + | chr8.1:19447541-19447560 | None:intergenic | 35.0% | |
| ACCGAATATCCTTCAAATAG+TGG | - | chr8.1:19448372-19448391 | MS.gene059922:intron | 35.0% | |
| ACGAAATGAGTAGCAAAGAT+TGG | - | chr8.1:19444639-19444658 | MS.gene059922:intron | 35.0% | |
| ACTATTTGAAGGATATTCGG+TGG | + | chr8.1:19448373-19448392 | None:intergenic | 35.0% | |
| AGGCCAAAAAGGAAAAGAAA+AGG | + | chr8.1:19447186-19447205 | None:intergenic | 35.0% | |
| AGTGTGGTATTCAAGGTAAA+GGG | + | chr8.1:19444039-19444058 | None:intergenic | 35.0% | |
| AGTTAAACGAAGCGAAGAAT+CGG | + | chr8.1:19445614-19445633 | None:intergenic | 35.0% | |
| ATACTCTTTGGACCTAATGA+TGG | - | chr8.1:19445979-19445998 | MS.gene059922:CDS | 35.0% | |
| ATCACAAAAGGTGGAAACTA+TGG | - | chr8.1:19446956-19446975 | MS.gene059922:CDS | 35.0% | |
| ATCCATAGAAGCTACTCAAA+TGG | + | chr8.1:19448653-19448672 | None:intergenic | 35.0% | |
| ATGTTTGCTCATATTTGCCA+TGG | - | chr8.1:19448274-19448293 | MS.gene059922:intron | 35.0% | |
| CAAAACAAGAAATCACTGCT+TGG | - | chr8.1:19446060-19446079 | MS.gene059922:intron | 35.0% | |
| CAAGTACTTCCATTGTTGTA+AGG | + | chr8.1:19444072-19444091 | None:intergenic | 35.0% | |
| CATTCTTGCTTAATTGGGAA+TGG | + | chr8.1:19447087-19447106 | None:intergenic | 35.0% | |
| CCAAGGATTTCTTAATCCTA+AGG | + | chr8.1:19446480-19446499 | None:intergenic | 35.0% | |
| CCATACAAATGAAGCTTGTA+AGG | + | chr8.1:19447630-19447649 | None:intergenic | 35.0% | |
| CCTTACAAGCTTCATTTGTA+TGG | - | chr8.1:19447627-19447646 | MS.gene059922:CDS | 35.0% | |
| CCTTAGGATTAAGAAATCCT+TGG | - | chr8.1:19446477-19446496 | MS.gene059922:CDS | 35.0% | |
| CGAAATGAGTAGCAAAGATT+GGG | - | chr8.1:19444640-19444659 | MS.gene059922:intron | 35.0% | |
| CTACTCATAAAAATTTGGGC+TGG | + | chr8.1:19447960-19447979 | None:intergenic | 35.0% | |
| CTATCTAAATTCTGTCACTC+GGG | - | chr8.1:19447887-19447906 | MS.gene059922:CDS | 35.0% | |
| CTGAATTTGTCCATCTTGTA+TGG | + | chr8.1:19444103-19444122 | None:intergenic | 35.0% | |
| GAAAACACACCAACTGTATT+TGG | + | chr8.1:19448198-19448217 | None:intergenic | 35.0% | |
| GCAGCTTTCATCTTTATTGT+TGG | - | chr8.1:19448683-19448702 | MS.gene059922:intron | 35.0% | |
| GCTTATGCCTTGAGAAAATT+GGG | - | chr8.1:19445361-19445380 | MS.gene059922:intron | 35.0% | |
| GGATTTATGGATTTAAGGGA+TGG | + | chr8.1:19447040-19447059 | None:intergenic | 35.0% | |
| GGCAAATTCTTCTCAATCAA+AGG | - | chr8.1:19445080-19445099 | MS.gene059922:intron | 35.0% | |
| GGGTATTTATACGTCATGAT+GGG | - | chr8.1:19446000-19446019 | MS.gene059922:CDS | 35.0% | |
| GGTTAATGAAACATGGAGTT+TGG | - | chr8.1:19446655-19446674 | MS.gene059922:intron | 35.0% | |
| GTAAGGACAAAATTTGAGTG+TGG | + | chr8.1:19444055-19444074 | None:intergenic | 35.0% | |
| GTCACAGAAAGAATAAGATG+TGG | - | chr8.1:19447241-19447260 | MS.gene059922:CDS | 35.0% | |
| GTGATACTCTACAATGTTGA+GGG | + | chr8.1:19448173-19448192 | None:intergenic | 35.0% | |
| GTTAATGAGTACGGCAATAT+TGG | - | chr8.1:19446677-19446696 | MS.gene059922:intron | 35.0% | |
| TACTCTTTGGACCTAATGAT+GGG | - | chr8.1:19445980-19445999 | MS.gene059922:CDS | 35.0% | |
| TATTTATACAATCGACAGCC+CGG | + | chr8.1:19447362-19447381 | None:intergenic | 35.0% | |
| TCCCAATTAAGCAAGAATGA+AGG | - | chr8.1:19447088-19447107 | MS.gene059922:intron | 35.0% | |
| TCCCTATTTATAAGACCCTT+TGG | + | chr8.1:19444620-19444639 | None:intergenic | 35.0% | |
| TCTCCACAAAAAAAGTAGGA+AGG | + | chr8.1:19446527-19446546 | None:intergenic | 35.0% | |
| TGAGACAGCATCATATTTCA+AGG | - | chr8.1:19444295-19444314 | MS.gene059922:intron | 35.0% | |
| TGGAGTTTGGTTAATGAGTA+CGG | - | chr8.1:19446668-19446687 | MS.gene059922:intron | 35.0% | |
| TGGGTATTTATACGTCATGA+TGG | - | chr8.1:19445999-19446018 | MS.gene059922:CDS | 35.0% | |
| TGTCTCTGTAACCATAAATG+AGG | + | chr8.1:19444839-19444858 | None:intergenic | 35.0% | |
| TGTGATTCTTCGGAATGTTT+AGG | + | chr8.1:19444796-19444815 | None:intergenic | 35.0% | |
| TGTTTGCTCATATTTGCCAT+GGG | - | chr8.1:19448275-19448294 | MS.gene059922:intron | 35.0% | |
| TTTAACATGTTATCAGAGCC+GGG | - | chr8.1:19447435-19447454 | MS.gene059922:CDS | 35.0% | |
| TTTCAGTTGTGGTCATGATT+TGG | - | chr8.1:19448214-19448233 | MS.gene059922:intron | 35.0% | |
| TTTGCAGGATCTTTATGAAG+AGG | - | chr8.1:19446925-19446944 | MS.gene059922:CDS | 35.0% | |
| ! | AAGATCTGGAGCTTGAAATA+TGG | - | chr8.1:19446453-19446472 | MS.gene059922:CDS | 35.0% |
| ! | AGATCTGGAGCTTGAAATAT+GGG | - | chr8.1:19446454-19446473 | MS.gene059922:CDS | 35.0% |
| ! | ATCAATTAGTATGCTTTGGG+GGG | - | chr8.1:19445292-19445311 | MS.gene059922:intron | 35.0% |
| ! | ATCCATTCCCAATTTTCTCA+AGG | + | chr8.1:19445371-19445390 | None:intergenic | 35.0% |
| ! | CATCCAAATTTTGCCAACAA+TGG | - | chr8.1:19445588-19445607 | MS.gene059922:intron | 35.0% |
| ! | GAGTAGTTAAAGAGCATGTA+GGG | - | chr8.1:19447974-19447993 | MS.gene059922:intron | 35.0% |
| ! | GCAAGAGTTAAGTATTGTTC+TGG | + | chr8.1:19448048-19448067 | None:intergenic | 35.0% |
| ! | GTCCGGTAAGTTTCTTTTAT+AGG | - | chr8.1:19444317-19444336 | MS.gene059922:intron | 35.0% |
| ! | TGAGTAGTTAAAGAGCATGT+AGG | - | chr8.1:19447973-19447992 | MS.gene059922:intron | 35.0% |
| ! | TTCTTCTCAATCAAAGGCAT+CGG | - | chr8.1:19445086-19445105 | MS.gene059922:intron | 35.0% |
| !! | CAAGCAGTGATTTCTTGTTT+TGG | + | chr8.1:19446062-19446081 | None:intergenic | 35.0% |
| !! | GTGAAGGTGTTAAATATGCT+TGG | + | chr8.1:19447608-19447627 | None:intergenic | 35.0% |
| !!! | GCGTTTTAAAATAAGTCCCA+TGG | + | chr8.1:19448294-19448313 | None:intergenic | 35.0% |
| AAAAGTTAGCTCAAAGGAGG+AGG | + | chr8.1:19447396-19447415 | None:intergenic | 40.0% | |
| AAACATGCAAGGATCAGTCA+TGG | + | chr8.1:19447149-19447168 | None:intergenic | 40.0% | |
| AAACCAGATGAAGGCCAAAA+AGG | + | chr8.1:19447197-19447216 | None:intergenic | 40.0% | |
| AAAGTTAGCTCAAAGGAGGA+GGG | + | chr8.1:19447395-19447414 | None:intergenic | 40.0% | |
| AAATGCAGCTTGTAAGGTGA+AGG | + | chr8.1:19447819-19447838 | None:intergenic | 40.0% | |
| AATATACTGCTAATGGCACC+GGG | - | chr8.1:19445760-19445779 | MS.gene059922:intron | 40.0% | |
| AATATGGTTGCTCATCCTGA+TGG | - | chr8.1:19445399-19445418 | MS.gene059922:intron | 40.0% | |
| AATGGTTGTATCCTGCTATG+GGG | + | chr8.1:19447069-19447088 | None:intergenic | 40.0% | |
| ACTATTCCTGAAGAAGGATC+AGG | - | chr8.1:19445471-19445490 | MS.gene059922:intron | 40.0% | |
| AGCCATTTGAGTAGCTTCTA+TGG | - | chr8.1:19448648-19448667 | MS.gene059922:intron | 40.0% | |
| AGTACTACGCAAAAGGTCTA+GGG | + | chr8.1:19444666-19444685 | None:intergenic | 40.0% | |
| ATCAACCGAGTTCTCTGTTA+AGG | - | chr8.1:19446750-19446769 | MS.gene059922:intron | 40.0% | |
| ATGACTGATCCTTGCATGTT+TGG | - | chr8.1:19447148-19447167 | MS.gene059922:intron | 40.0% | |
| ATGCTTTACATGTCCACTAC+AGG | - | chr8.1:19447912-19447931 | MS.gene059922:CDS | 40.0% | |
| ATTTATACAATCGACAGCCC+GGG | + | chr8.1:19447361-19447380 | None:intergenic | 40.0% | |
| CAAGAAATCACTGCTTGGAA+AGG | - | chr8.1:19446065-19446084 | MS.gene059922:intron | 40.0% | |
| CACCGTGTTGAGATGTAAAT+GGG | + | chr8.1:19445954-19445973 | None:intergenic | 40.0% | |
| CAGCATCATATTTCAAGGTC+CGG | - | chr8.1:19444300-19444319 | MS.gene059922:intron | 40.0% | |
| CATCCCAAAAGTTAGCTCAA+AGG | + | chr8.1:19447402-19447421 | None:intergenic | 40.0% | |
| CCATACAAATGCAGCTTGTA+AGG | + | chr8.1:19447825-19447844 | None:intergenic | 40.0% | |
| CCTTACAAGCTGCATTTGTA+TGG | - | chr8.1:19447822-19447841 | MS.gene059922:CDS | 40.0% | |
| CGCATAAGACTGTGATTCTT+CGG | + | chr8.1:19444806-19444825 | None:intergenic | 40.0% | |
| CGTGATACTCTACAATGTTG+AGG | + | chr8.1:19448174-19448193 | None:intergenic | 40.0% | |
| CTCCCATTTACATCTCAACA+CGG | - | chr8.1:19445949-19445968 | MS.gene059922:CDS | 40.0% | |
| GAAAAAAAGTGGTTACTGGC+AGG | + | chr8.1:19444921-19444940 | None:intergenic | 40.0% | |
| GAAAAGATGTATCCAAGAGC+TGG | + | chr8.1:19448480-19448499 | None:intergenic | 40.0% | |
| GAATATACTGCTAATGGCAC+CGG | - | chr8.1:19445759-19445778 | MS.gene059922:intron | 40.0% | |
| GAATGGTTGTATCCTGCTAT+GGG | + | chr8.1:19447070-19447089 | None:intergenic | 40.0% | |
| GACTTCCTTAACAGAGAACT+CGG | + | chr8.1:19446758-19446777 | None:intergenic | 40.0% | |
| GAGTGTGGTATTCAAGGTAA+AGG | + | chr8.1:19444040-19444059 | None:intergenic | 40.0% | |
| GGCTTATGCCTTGAGAAAAT+TGG | - | chr8.1:19445360-19445379 | MS.gene059922:intron | 40.0% | |
| GTATCACGACCAAATACAGT+TGG | - | chr8.1:19448186-19448205 | MS.gene059922:intron | 40.0% | |
| TAAACAGCTCGCCTGAATAA+GGG | + | chr8.1:19445008-19445027 | None:intergenic | 40.0% | |
| TAAACCTGCAACGCTAGTTA+AGG | - | chr8.1:19446618-19446637 | MS.gene059922:intron | 40.0% | |
| TAACACTAACACGTCAACAC+CGG | + | chr8.1:19446209-19446228 | None:intergenic | 40.0% | |
| TACAAGTGCTAAACCAACTG+AGG | - | chr8.1:19445903-19445922 | MS.gene059922:CDS | 40.0% | |
| TATGGGGGGAATTGGATTTA+TGG | + | chr8.1:19447053-19447072 | None:intergenic | 40.0% | |
| TCAAATGGGGAAAGTTTGGT+TGG | - | chr8.1:19445446-19445465 | MS.gene059922:intron | 40.0% | |
| TCATTGTTGCGTAATGCAAC+AGG | + | chr8.1:19445321-19445340 | None:intergenic | 40.0% | |
| TCTCTGTTAAGGAAGTCCAA+TGG | - | chr8.1:19446761-19446780 | MS.gene059922:intron | 40.0% | |
| TGATTTCAAAAGTGAGGCAC+AGG | + | chr8.1:19444160-19444179 | None:intergenic | 40.0% | |
| TGCCTTGAGAAAATTGGGAA+TGG | - | chr8.1:19445366-19445385 | MS.gene059922:intron | 40.0% | |
| TGCTGCAATTCCATACAAGA+TGG | - | chr8.1:19444090-19444109 | MS.gene059922:intron | 40.0% | |
| TGCTTTACATGTCCACTACA+GGG | - | chr8.1:19447913-19447932 | MS.gene059922:CDS | 40.0% | |
| TTACACTTGCTCACAGGAAA+AGG | - | chr8.1:19448581-19448600 | MS.gene059922:intron | 40.0% | |
| TTATTCAGGCGAGCTGTTTA+CGG | - | chr8.1:19445008-19445027 | MS.gene059922:intron | 40.0% | |
| TTCATTCAGTGTGGTTGCAT+TGG | + | chr8.1:19445220-19445239 | None:intergenic | 40.0% | |
| TTGAGAAGAATTTGCCGGAA+TGG | + | chr8.1:19445076-19445095 | None:intergenic | 40.0% | |
| TTGGCAACTATTCCTGAAGA+AGG | - | chr8.1:19445465-19445484 | MS.gene059922:intron | 40.0% | |
| TTTCTCAAGGCATAAGCCAT+GGG | + | chr8.1:19445358-19445377 | None:intergenic | 40.0% | |
| ! | AGACACCCTTTTGTTGAAGT+TGG | - | chr8.1:19447288-19447307 | MS.gene059922:CDS | 40.0% |
| ! | CCTCCTTTGAGCTAACTTTT+GGG | - | chr8.1:19447396-19447415 | MS.gene059922:CDS | 40.0% |
| ! | TCCTCCTTTGAGCTAACTTT+TGG | - | chr8.1:19447395-19447414 | MS.gene059922:CDS | 40.0% |
| ! | TTATACGTCATGATGGGAGA+TGG | - | chr8.1:19446006-19446025 | MS.gene059922:CDS | 40.0% |
| ! | TTTTCTCAAGGCATAAGCCA+TGG | + | chr8.1:19445359-19445378 | None:intergenic | 40.0% |
| ! | TTTTTGTGGAGATGTTGGAC+AGG | - | chr8.1:19446535-19446554 | MS.gene059922:CDS | 40.0% |
| !! | AGTTGGTGTGTTTTCAGTTG+TGG | - | chr8.1:19448203-19448222 | MS.gene059922:intron | 40.0% |
| !! | ATGAAGCATCGACAAAGACA+GGG | + | chr8.1:19446248-19446267 | None:intergenic | 40.0% |
| !! | ATGACTTCTGCTCTGAAGTA+TGG | - | chr8.1:19445112-19445131 | MS.gene059922:intron | 40.0% |
| !! | GTTAGTGTTAGCTTTGTGCT+TGG | - | chr8.1:19446219-19446238 | MS.gene059922:intron | 40.0% |
| !! | TATGAAGCATCGACAAAGAC+AGG | + | chr8.1:19446249-19446268 | None:intergenic | 40.0% |
| !! | TCAATTAGTATGCTTTGGGG+GGG | - | chr8.1:19445293-19445312 | MS.gene059922:intron | 40.0% |
| !! | TGACTTCTGCTCTGAAGTAT+GGG | - | chr8.1:19445113-19445132 | MS.gene059922:intron | 40.0% |
| !! | TTTCCTTTTTGGCCTTCATC+TGG | - | chr8.1:19447191-19447210 | MS.gene059922:CDS | 40.0% |
| !!! | AAAACGCTTTGGTGCTTTTC+AGG | - | chr8.1:19448307-19448326 | MS.gene059922:intron | 40.0% |
| AAAAGCTAGCTCAAAGGAGG+AGG | + | chr8.1:19447770-19447789 | None:intergenic | 45.0% | |
| AAAGCTAGCTCAAAGGAGGA+GGG | + | chr8.1:19447769-19447788 | None:intergenic | 45.0% | |
| AAAGGTAGCTCAAAGGAGGA+AGG | + | chr8.1:19447574-19447593 | None:intergenic | 45.0% | |
| AAGGATCGGCATCAATTACC+GGG | - | chr8.1:19447107-19447126 | MS.gene059922:intron | 45.0% | |
| AATCGTGTGCACAGCTGAAA+GGG | + | chr8.1:19448419-19448438 | None:intergenic | 45.0% | |
| AGAAGGATCAGGAGGACAAT+TGG | - | chr8.1:19445482-19445501 | MS.gene059922:intron | 45.0% | |
| AGATGTATCCAAGAGCTGGA+AGG | + | chr8.1:19448476-19448495 | None:intergenic | 45.0% | |
| ATGGCAGAATTGCAAAGCAC+AGG | + | chr8.1:19445057-19445076 | None:intergenic | 45.0% | |
| ATGGTTGTATCCTGCTATGG+GGG | + | chr8.1:19447068-19447087 | None:intergenic | 45.0% | |
| ATGTTATCAGAGCCGGGTTA+AGG | - | chr8.1:19447441-19447460 | MS.gene059922:CDS | 45.0% | |
| ATTCCTGAAGAAGGATCAGG+AGG | - | chr8.1:19445474-19445493 | MS.gene059922:intron | 45.0% | |
| CAAAAGGTGGAAACTATGGC+TGG | - | chr8.1:19446960-19446979 | MS.gene059922:CDS | 45.0% | |
| CAAAGCACAGGAACTGATCT+CGG | + | chr8.1:19445045-19445064 | None:intergenic | 45.0% | |
| CAACCACACTGAATGAACTG+TGG | - | chr8.1:19445223-19445242 | MS.gene059922:intron | 45.0% | |
| CACTGCTTGGAAAGGTTATG+AGG | - | chr8.1:19446073-19446092 | MS.gene059922:intron | 45.0% | |
| CAGTACCTTCCAAACATGCA+AGG | + | chr8.1:19447160-19447179 | None:intergenic | 45.0% | |
| CATCAAATCGCTTGATGCTG+TGG | - | chr8.1:19448251-19448270 | MS.gene059922:intron | 45.0% | |
| CATCCCAAAAGCTAGCTCAA+AGG | + | chr8.1:19447776-19447795 | None:intergenic | 45.0% | |
| CATCCCAAAAGGTAGCTCAA+AGG | + | chr8.1:19447581-19447600 | None:intergenic | 45.0% | |
| CCACATTGCAATCCTTAACC+CGG | + | chr8.1:19447456-19447475 | None:intergenic | 45.0% | |
| CCACCGTGTTGAGATGTAAA+TGG | + | chr8.1:19445955-19445974 | None:intergenic | 45.0% | |
| CCATTTACATCTCAACACGG+TGG | - | chr8.1:19445952-19445971 | MS.gene059922:CDS | 45.0% | |
| CCCAAAAGTTAGCTCAAAGG+AGG | + | chr8.1:19447399-19447418 | None:intergenic | 45.0% | |
| CCTGTATGCTGATCTTTACG+CGG | - | chr8.1:19448332-19448351 | MS.gene059922:intron | 45.0% | |
| CGAGTCAAATGGGGAAAGTT+TGG | - | chr8.1:19445442-19445461 | MS.gene059922:intron | 45.0% | |
| CGGCCATTGTTGGCAAAATT+TGG | + | chr8.1:19445594-19445613 | None:intergenic | 45.0% | |
| CGGGTTAAGGATTGCAATGT+GGG | - | chr8.1:19447454-19447473 | MS.gene059922:CDS | 45.0% | |
| CGTTCTTCTCGAGTCAAATG+GGG | - | chr8.1:19445433-19445452 | MS.gene059922:intron | 45.0% | |
| CTGATCCTTGCATGTTTGGA+AGG | - | chr8.1:19447152-19447171 | MS.gene059922:intron | 45.0% | |
| CTGTATGCTGATCTTTACGC+GGG | - | chr8.1:19448333-19448352 | MS.gene059922:intron | 45.0% | |
| GAAGGATCGGCATCAATTAC+CGG | - | chr8.1:19447106-19447125 | MS.gene059922:intron | 45.0% | |
| GAATCAAAACTGCATCGCCA+AGG | + | chr8.1:19446497-19446516 | None:intergenic | 45.0% | |
| GAATGCATGCGTCTTTCTTG+AGG | - | chr8.1:19446811-19446830 | MS.gene059922:intron | 45.0% | |
| GAGCTTGAAATATGGGCCTT+AGG | - | chr8.1:19446461-19446480 | MS.gene059922:CDS | 45.0% | |
| GAGGTGGATCTCATCACAAA+AGG | - | chr8.1:19446944-19446963 | MS.gene059922:CDS | 45.0% | |
| GAGTACTACGCAAAAGGTCT+AGG | + | chr8.1:19444667-19444686 | None:intergenic | 45.0% | |
| GATAAATGGTCTGGCTGCAA+TGG | - | chr8.1:19445642-19445661 | MS.gene059922:intron | 45.0% | |
| GATCGATGCAGCCTCATTTA+TGG | - | chr8.1:19444825-19444844 | MS.gene059922:intron | 45.0% | |
| GATGTATCCAAGAGCTGGAA+GGG | + | chr8.1:19448475-19448494 | None:intergenic | 45.0% | |
| GCAGGATCTTTATGAAGAGG+TGG | - | chr8.1:19446928-19446947 | MS.gene059922:CDS | 45.0% | |
| GCGTTCTTCTCGAGTCAAAT+GGG | - | chr8.1:19445432-19445451 | MS.gene059922:intron | 45.0% | |
| GCTAGCTACATACAAGGCAT+AGG | + | chr8.1:19444958-19444977 | None:intergenic | 45.0% | |
| GCTTTGCAATTCTGCCATTC+CGG | - | chr8.1:19445059-19445078 | MS.gene059922:intron | 45.0% | |
| GGAATGGTTGTATCCTGCTA+TGG | + | chr8.1:19447071-19447090 | None:intergenic | 45.0% | |
| GGATCGATAAACATATCCCC+CGG | + | chr8.1:19447128-19447147 | None:intergenic | 45.0% | |
| GGGCCTGGGTCAAAAAAATT+TGG | + | chr8.1:19447668-19447687 | None:intergenic | 45.0% | |
| GGTGACTCTGTAGTAGTGAA+TGG | + | chr8.1:19447007-19447026 | None:intergenic | 45.0% | |
| GTAAACAGCTCGCCTGAATA+AGG | + | chr8.1:19445009-19445028 | None:intergenic | 45.0% | |
| GTGGATCTCATCACAAAAGG+TGG | - | chr8.1:19446947-19446966 | MS.gene059922:CDS | 45.0% | |
| GTGGTATTCAAGGTAAAGGG+TGG | + | chr8.1:19444036-19444055 | None:intergenic | 45.0% | |
| TATGGCTGGCGTGTATATGA+GGG | - | chr8.1:19446974-19446993 | MS.gene059922:CDS | 45.0% | |
| TGCTTGGATCTCATCCCAAA+AGG | + | chr8.1:19447413-19447432 | None:intergenic | 45.0% | |
| TTACATGTCCACTACAGGGA+CGG | - | chr8.1:19447917-19447936 | MS.gene059922:CDS | 45.0% | |
| TTCACTACTACAGAGTCACC+TGG | - | chr8.1:19447007-19447026 | MS.gene059922:CDS | 45.0% | |
| TTCTCAAGGCATAAGCCATG+GGG | + | chr8.1:19445357-19445376 | None:intergenic | 45.0% | |
| TTGCCACAGTTCATTCAGTG+TGG | + | chr8.1:19445229-19445248 | None:intergenic | 45.0% | |
| ! | AGTGGTTACTGGCAGGTTTT+TGG | + | chr8.1:19444914-19444933 | None:intergenic | 45.0% |
| ! | CCTCCTTTGAGCTACCTTTT+GGG | - | chr8.1:19447575-19447594 | MS.gene059922:CDS | 45.0% |
| ! | CTCAAATGGCTTGCATGAGA+AGG | + | chr8.1:19448639-19448658 | None:intergenic | 45.0% |
| ! | GGTGCTGAATCACACAGTAT+AGG | + | chr8.1:19448444-19448463 | None:intergenic | 45.0% |
| ! | GTGGTTGCATTGGTATTAGC+TGG | + | chr8.1:19445210-19445229 | None:intergenic | 45.0% |
| ! | TAGAGGTGTGACCCTTATTC+AGG | - | chr8.1:19444994-19445013 | MS.gene059922:intron | 45.0% |
| ! | TCCTCCTTTGAGCTACCTTT+TGG | - | chr8.1:19447574-19447593 | MS.gene059922:CDS | 45.0% |
| ! | TTAAGGGATGGATTTCCTCC+AGG | + | chr8.1:19447028-19447047 | None:intergenic | 45.0% |
| !! | CTGAAGGAGTACTACGCAAA+AGG | + | chr8.1:19444673-19444692 | None:intergenic | 45.0% |
| !!! | CCTCCTTTGAGCTAGCTTTT+GGG | - | chr8.1:19447770-19447789 | MS.gene059922:CDS | 45.0% |
| !!! | TCCTCCTTTGAGCTAGCTTT+TGG | - | chr8.1:19447769-19447788 | MS.gene059922:CDS | 45.0% |
| !!! | TAAAATAAATAAATGTTTTA+GGG | + | chr8.1:19444210-19444229 | None:intergenic | 5.0% |
| !!! | TTAAAATAAATAAATGTTTT+AGG | + | chr8.1:19444211-19444230 | None:intergenic | 5.0% |
| AACCCACGTTGAGACACTGA+AGG | + | chr8.1:19444689-19444708 | None:intergenic | 50.0% | |
| AATCCAATTCCCCCCATAGC+AGG | - | chr8.1:19447055-19447074 | MS.gene059922:CDS | 50.0% | |
| ACCTCCTTGACCTTGTAAGG+AGG | + | chr8.1:19445181-19445200 | None:intergenic | 50.0% | |
| ACGTCCTTAACTAGCGTTGC+AGG | + | chr8.1:19446625-19446644 | None:intergenic | 50.0% | |
| ACTACTACAGAGTCACCTGG+AGG | - | chr8.1:19447010-19447029 | MS.gene059922:CDS | 50.0% | |
| ACTCCTTCAGTGTCTCAACG+TGG | - | chr8.1:19444683-19444702 | MS.gene059922:intron | 50.0% | |
| AGCGAAGAATCGGCCATTGT+TGG | + | chr8.1:19445604-19445623 | None:intergenic | 50.0% | |
| AGGATCGGCATCAATTACCG+GGG | - | chr8.1:19447108-19447127 | MS.gene059922:intron | 50.0% | |
| CAAGTGTAACTGCAGCGACT+TGG | + | chr8.1:19448570-19448589 | None:intergenic | 50.0% | |
| CACGGTGGTCAGATACTCTT+TGG | - | chr8.1:19445967-19445986 | MS.gene059922:CDS | 50.0% | |
| CCCAAAAGCTAGCTCAAAGG+AGG | + | chr8.1:19447773-19447792 | None:intergenic | 50.0% | |
| CCCAAAAGGTAGCTCAAAGG+AGG | + | chr8.1:19447578-19447597 | None:intergenic | 50.0% | |
| CCGCGTAAAGATCAGCATAC+AGG | + | chr8.1:19448335-19448354 | None:intergenic | 50.0% | |
| CCGGGTTAAGGATTGCAATG+TGG | - | chr8.1:19447453-19447472 | MS.gene059922:CDS | 50.0% | |
| CCTCCTTGACCTTGTAAGGA+GGG | + | chr8.1:19445180-19445199 | None:intergenic | 50.0% | |
| CCTTGTAAGGAGGGGGAAAA+TGG | + | chr8.1:19445171-19445190 | None:intergenic | 50.0% | |
| CGCGTTCTTCTCGAGTCAAA+TGG | - | chr8.1:19445431-19445450 | MS.gene059922:intron | 50.0% | |
| CTATGGCTGGCGTGTATATG+AGG | - | chr8.1:19446973-19446992 | MS.gene059922:CDS | 50.0% | |
| CTCCTTCAGTGTCTCAACGT+GGG | - | chr8.1:19444684-19444703 | MS.gene059922:intron | 50.0% | |
| CTCCTTGACCTTGTAAGGAG+GGG | + | chr8.1:19445179-19445198 | None:intergenic | 50.0% | |
| CTGCAGTTACACTTGCTCAC+AGG | - | chr8.1:19448575-19448594 | MS.gene059922:intron | 50.0% | |
| GAATCGTGTGCACAGCTGAA+AGG | + | chr8.1:19448420-19448439 | None:intergenic | 50.0% | |
| GAGACTATTATCCCTCCCCA+TGG | - | chr8.1:19445339-19445358 | MS.gene059922:intron | 50.0% | |
| GCAATGTGGGAATTTGACCC+AGG | - | chr8.1:19447467-19447486 | MS.gene059922:CDS | 50.0% | |
| GCATGAGAAGGAGAAGGAGA+AGG | + | chr8.1:19448627-19448646 | None:intergenic | 50.0% | |
| GTAGAAATGCGTACCGAGGA+TGG | + | chr8.1:19445792-19445811 | None:intergenic | 50.0% | |
| TATCCTGCTATGGGGGGAAT+TGG | + | chr8.1:19447061-19447080 | None:intergenic | 50.0% | |
| TCAGTGTCTCAACGTGGGTT+AGG | - | chr8.1:19444689-19444708 | MS.gene059922:intron | 50.0% | |
| TCCACCTCCTTGACCTTGTA+AGG | + | chr8.1:19445184-19445203 | None:intergenic | 50.0% | |
| TCCTTACAAGGTCAAGGAGG+TGG | - | chr8.1:19445180-19445199 | MS.gene059922:intron | 50.0% | |
| TCCTTGACCTTGTAAGGAGG+GGG | + | chr8.1:19445178-19445197 | None:intergenic | 50.0% | |
| TGAGAAGGAGAAGGAGAAGG+AGG | + | chr8.1:19448624-19448643 | None:intergenic | 50.0% | |
| TGGTGTAGAAATGCGTACCG+AGG | + | chr8.1:19445796-19445815 | None:intergenic | 50.0% | |
| TGGTTGTATCCTGCTATGGG+GGG | + | chr8.1:19447067-19447086 | None:intergenic | 50.0% | |
| TGTCCTCCTGATCCTTCTTC+AGG | + | chr8.1:19445480-19445499 | None:intergenic | 50.0% | |
| TTGTTAGTCCCACATCGCTC+AGG | - | chr8.1:19447333-19447352 | MS.gene059922:CDS | 50.0% | |
| ! | AGCGACTTGGACGTACAACT+CGG | + | chr8.1:19448557-19448576 | None:intergenic | 50.0% |
| ! | CCATTTTCCCCCTCCTTACA+AGG | - | chr8.1:19445168-19445187 | MS.gene059922:intron | 50.0% |
| ! | TACGTCATGATGGGAGATGG+AGG | - | chr8.1:19446009-19446028 | MS.gene059922:CDS | 50.0% |
| ! | TGGCTTGCATGAGAAGGAGA+AGG | + | chr8.1:19448633-19448652 | None:intergenic | 50.0% |
| AAATGCGTACCGAGGATGGC+TGG | + | chr8.1:19445788-19445807 | None:intergenic | 55.0% | |
| AACGCGCGATTTGAGCCATC+AGG | + | chr8.1:19445417-19445436 | None:intergenic | 55.0% | |
| AAGAGCTGGAAGGGAGCTAC+TGG | + | chr8.1:19448466-19448485 | None:intergenic | 55.0% | |
| AATGCGTACCGAGGATGGCT+GGG | + | chr8.1:19445787-19445806 | None:intergenic | 55.0% | |
| AGAGCTGGAAGGGAGCTACT+GGG | + | chr8.1:19448465-19448484 | None:intergenic | 55.0% | |
| AGTAGCTCCCTTCCAGCTCT+TGG | - | chr8.1:19448465-19448484 | MS.gene059922:intron | 55.0% | |
| ATCTTTACGCGGGTGCGCTT+TGG | - | chr8.1:19448343-19448362 | MS.gene059922:intron | 55.0% | |
| CAAGGCATAAGCCATGGGGA+GGG | + | chr8.1:19445353-19445372 | None:intergenic | 55.0% | |
| CACAGGAACTGATCTCGGTG+TGG | + | chr8.1:19445040-19445059 | None:intergenic | 55.0% | |
| CCCTCCTTACAAGGTCAAGG+AGG | - | chr8.1:19445177-19445196 | MS.gene059922:intron | 55.0% | |
| GGATCGGCATCAATTACCGG+GGG | - | chr8.1:19447109-19447128 | MS.gene059922:intron | 55.0% | |
| TCAAGGCATAAGCCATGGGG+AGG | + | chr8.1:19445354-19445373 | None:intergenic | 55.0% | |
| TCCCACATCGCTCATGTTCC+CGG | - | chr8.1:19447519-19447538 | MS.gene059922:CDS | 55.0% | |
| TCCCCCTCCTTACAAGGTCA+AGG | - | chr8.1:19445174-19445193 | MS.gene059922:intron | 55.0% | |
| TCTTCACACCGTCCCTGTAG+TGG | + | chr8.1:19447928-19447947 | None:intergenic | 55.0% | |
| TCTTTACGCGGGTGCGCTTT+GGG | - | chr8.1:19448344-19448363 | MS.gene059922:intron | 55.0% | |
| ! | ATGGGAGATGGAGGAGGTAC+AGG | - | chr8.1:19446018-19446037 | MS.gene059922:CDS | 55.0% |
| ! | GTCATGATGGGAGATGGAGG+AGG | - | chr8.1:19446012-19446031 | MS.gene059922:CDS | 55.0% |
| ATTTGACCCAGGCCCACGCT+AGG | - | chr8.1:19447478-19447497 | MS.gene059922:CDS | 60.0% | |
| CCCACATCGCTCATGTTCCC+GGG | - | chr8.1:19447520-19447539 | MS.gene059922:CDS | 60.0% | |
| CCCGGGAACATGAGCGATGT+GGG | + | chr8.1:19447523-19447542 | None:intergenic | 60.0% | |
| TCCCACATCGCTCAGGTTCC+CGG | - | chr8.1:19447340-19447359 | MS.gene059922:CDS | 60.0% | |
| ! | TTTTGACCCAGGCCCACGCT+AGG | - | chr8.1:19447673-19447692 | MS.gene059922:CDS | 60.0% |
| CCCACATCGCTCAGGTTCCC+GGG | - | chr8.1:19447341-19447360 | MS.gene059922:CDS | 65.0% | |
| CCCGGGAACCTGAGCGATGT+GGG | + | chr8.1:19447344-19447363 | None:intergenic | 65.0% | |
| GCCCGGGAACATGAGCGATG+TGG | + | chr8.1:19447524-19447543 | None:intergenic | 65.0% | |
| TACCGAGGATGGCTGGGACC+CGG | + | chr8.1:19445781-19445800 | None:intergenic | 65.0% | |
| ACCCACCCTCACGCCTAGCG+TGG | + | chr8.1:19447494-19447513 | None:intergenic | 70.0% | |
| CACCGGGTCCCAGCCATCCT+CGG | - | chr8.1:19445776-19445795 | MS.gene059922:intron | 70.0% | |
| CAGGCCCACGCTAGGCGTGA+GGG | - | chr8.1:19447486-19447505 | MS.gene059922:CDS | 70.0% | |
| CCCACCCTCACGCCTAGCGT+GGG | + | chr8.1:19447493-19447512 | None:intergenic | 70.0% | |
| CCCACGCTAGGCGTGAGGGT+GGG | - | chr8.1:19447490-19447509 | MS.gene059922:CDS | 70.0% | |
| CTCACGCCTAGCGTGGGCCT+GGG | + | chr8.1:19447487-19447506 | None:intergenic | 70.0% | |
| GCCCGGGAACCTGAGCGATG+TGG | + | chr8.1:19447345-19447364 | None:intergenic | 70.0% | |
| CCAGGCCCACGCTAGGCGTG+AGG | - | chr8.1:19447485-19447504 | MS.gene059922:CDS | 75.0% | |
| CCTCACGCCTAGCGTGGGCC+TGG | + | chr8.1:19447488-19447507 | None:intergenic | 75.0% | |
| GCCCACGCTAGGCGTGAGGG+TGG | - | chr8.1:19447489-19447508 | MS.gene059922:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 19444021 | 19448963 | 19444021 | ID=MS.gene059922 |
| chr8.1 | mRNA | 19444021 | 19448963 | 19444021 | ID=MS.gene059922.t1;Parent=MS.gene059922 |
| chr8.1 | exon | 19448793 | 19448963 | 19448793 | ID=MS.gene059922.t1.exon1;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19448793 | 19448963 | 19448793 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19447187 | 19447987 | 19447187 | ID=MS.gene059922.t1.exon2;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19447187 | 19447987 | 19447187 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19446867 | 19447083 | 19446867 | ID=MS.gene059922.t1.exon3;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19446867 | 19447083 | 19446867 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19446428 | 19446591 | 19446428 | ID=MS.gene059922.t1.exon4;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19446428 | 19446591 | 19446428 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19445811 | 19446052 | 19445811 | ID=MS.gene059922.t1.exon5;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19445811 | 19446052 | 19445811 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19444424 | 19444655 | 19444424 | ID=MS.gene059922.t1.exon6;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19444424 | 19444655 | 19444424 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19444160 | 19444221 | 19444160 | ID=MS.gene059922.t1.exon7;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19444160 | 19444221 | 19444160 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| chr8.1 | exon | 19444021 | 19444084 | 19444021 | ID=MS.gene059922.t1.exon8;Parent=MS.gene059922.t1 |
| chr8.1 | CDS | 19444021 | 19444084 | 19444021 | ID=cds.MS.gene059922.t1;Parent=MS.gene059922.t1 |
| Gene Sequence |
| Protein sequence |
