AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43216


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43216.t1 MTR_4g107400 98.569 629 9 0 1 629 69 697 0.0 1283
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43216.t1 AT1G74790 67.147 624 189 5 1 616 66 681 0.0 863
MS.gene43216.t1 AT5G62630 62.019 624 206 8 1 607 68 677 0.0 785
MS.gene43216.t1 AT5G39970 58.541 603 227 8 8 603 60 646 0.0 741
MS.gene43216.t1 AT5G39970 58.541 603 227 8 8 603 73 659 0.0 740
MS.gene43216.t1 AT5G39970 58.954 497 186 6 8 500 73 555 0.0 630

Find 183 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCCGTTGTTTGCAAAATT+TGG 0.093490 8.4:-19516760 None:intergenic
ATCCTTCATTCTTGTTTATT+TGG 0.094526 8.4:-19518314 None:intergenic
GAATTGGATTTATGGATTTA+AGG 0.142580 8.4:-19518266 None:intergenic
GGCTTATGCCTTGAGAAAAT+TGG 0.146095 8.4:+19516529 MS.gene43216:CDS
AATCCTAAGGCCCATATTTC+AGG 0.198218 8.4:-19517688 None:intergenic
CAAGCAGTGATTTCTTGTTT+TGG 0.219887 8.4:-19517228 None:intergenic
ATCTTTACGCGGGTGCGCTT+TGG 0.219972 8.4:+19518981 MS.gene43216:CDS
GTAAACAGCTCGCCTGAATA+AGG 0.226039 8.4:-19516175 None:intergenic
TCCTTCATTCTTGTTTATTT+GGG 0.235668 8.4:-19518313 None:intergenic
AAAGCATACTGATTGATTAT+TGG 0.243520 8.4:-19516455 None:intergenic
AAGATCTGGAGCCTGAAATA+TGG 0.289679 8.4:+19517677 MS.gene43216:CDS
ACCCATTTGAGTAGCTTCTA+TGG 0.290723 8.4:+19519286 MS.gene43216:CDS
GCAGCTTTCATCTTTATTGT+TGG 0.292030 8.4:+19519321 MS.gene43216:CDS
TAGAGGTGTGACCCTTATTC+AGG 0.292454 8.4:+19516163 MS.gene43216:intron
ATGACTTCTGCTCTGAAGTA+TGG 0.295903 8.4:+19516281 MS.gene43216:CDS
CGAGTCAAATGGGGAAAGTT+TGG 0.296402 8.4:+19516611 MS.gene43216:CDS
AAGTTAGTAAACTTGGACTT+TGG 0.298827 8.4:+19517611 MS.gene43216:CDS
GTTTATATTCTTGCAAGTTC+TGG 0.302709 8.4:+19519163 MS.gene43216:CDS
TCTTTACGCGGGTGCGCTTT+GGG 0.310364 8.4:+19518982 MS.gene43216:CDS
CCACCGTGTTGAGATGTAAA+TGG 0.312281 8.4:-19517121 None:intergenic
ATAATCAATCAGTATGCTTT+GGG 0.312395 8.4:+19516458 MS.gene43216:CDS
AATTGGATTTATGGATTTAA+GGG 0.316481 8.4:-19518265 None:intergenic
TGTCCTCCTGATCCTTCTTC+AGG 0.320055 8.4:-19516646 None:intergenic
TTACTAGTACCTATCTTTGA+TGG 0.350428 8.4:-19516868 None:intergenic
TTATTCAGGCGAGCTGTTTA+CGG 0.352655 8.4:+19516177 MS.gene43216:CDS
ATCACAAAAGGTGGAAACTA+TGG 0.353305 8.4:+19518180 MS.gene43216:CDS
GAATGGATCTTATCTCAATA+TGG 0.354342 8.4:+19516552 MS.gene43216:CDS
CACGGTGGTCAGATACTCTT+TGG 0.356198 8.4:+19517136 MS.gene43216:CDS
AATAATCAATCAGTATGCTT+TGG 0.356937 8.4:+19516457 MS.gene43216:CDS
TGATACTCAATTTGGAATGA+TGG 0.358990 8.4:+19516723 MS.gene43216:CDS
AGTTAGTAAACTTGGACTTT+GGG 0.361263 8.4:+19517612 MS.gene43216:CDS
GCTTTGCAATTCTGCCATTC+CGG 0.363882 8.4:+19516228 MS.gene43216:CDS
CTATGGCTGGCGTGTATATG+AGG 0.364427 8.4:+19518197 MS.gene43216:CDS
ATGACTGATCCTTGCATGTT+TGG 0.370498 8.4:+19518372 MS.gene43216:CDS
TTAACTGTAATAAAGATAAA+TGG 0.372614 8.4:+19516797 MS.gene43216:CDS
CCTTGTAAGGAAGGGGAAAA+TGG 0.377761 8.4:-19516337 None:intergenic
CATTCTTGTTTATTTGGGAA+TGG 0.393620 8.4:-19518308 None:intergenic
GCTTATGCCTTGAGAAAATT+GGG 0.396776 8.4:+19516530 MS.gene43216:CDS
TTCATTCAGTTTGGTTGCAT+TGG 0.399995 8.4:-19516386 None:intergenic
AAGAGCTGGAAGGGAGCTAC+TGG 0.401179 8.4:-19519101 None:intergenic
CGCGTTCTTCTCGAGTCAAA+TGG 0.401407 8.4:+19516600 MS.gene43216:CDS
TCCACTATTTGAAGGATCTT+CGG 0.407251 8.4:-19519011 None:intergenic
AGATCTTTATCTTCACTGAA+TGG 0.411884 8.4:-19517661 None:intergenic
AGAAGGATCAGGAGGACAAT+TGG 0.415576 8.4:+19516651 MS.gene43216:CDS
GAAGGATCAGCATCAATTAC+CGG 0.415592 8.4:+19518330 MS.gene43216:CDS
TTGCCACAGTTCATTCAGTT+TGG 0.416205 8.4:-19516395 None:intergenic
ATTGCAGAATATACTGCTAA+TGG 0.420026 8.4:+19516922 MS.gene43216:CDS
AGTAGCTCCCTTCCAGCTCT+TGG 0.420155 8.4:+19519103 MS.gene43216:CDS
GTGAAATTTCCACTATTTGA+AGG 0.422937 8.4:-19519019 None:intergenic
AAATGCGTACCGAGGATGGC+TGG 0.424046 8.4:-19516954 None:intergenic
GGAATGGTTGTATCCTGCTA+TGG 0.426023 8.4:-19518292 None:intergenic
AAGTATAAATACCCATCATT+AGG 0.427362 8.4:-19517160 None:intergenic
TCCACCTCCTTGACCTTGTA+AGG 0.427515 8.4:-19516350 None:intergenic
TGTAATAAAGATAAATGGTC+TGG 0.438396 8.4:+19516802 MS.gene43216:CDS
ATCCATAGAAGCTACTCAAA+TGG 0.438891 8.4:-19519288 None:intergenic
GAGCCTGAAATATGGGCCTT+AGG 0.440881 8.4:+19517685 MS.gene43216:CDS
CACTGCTTGGAAAGGTTATG+AGG 0.441646 8.4:+19517242 MS.gene43216:CDS
TTTGATTGAGAAGAATTTGC+CGG 0.444403 8.4:-19516247 None:intergenic
AGTTAAACGAAGCGAAGAAT+CGG 0.448068 8.4:-19516780 None:intergenic
TTGGTTGCATTGGTATTAGC+TGG 0.449607 8.4:-19516376 None:intergenic
ACCGAAGATCCTTCAAATAG+TGG 0.450164 8.4:+19519010 MS.gene43216:CDS
TCACTGAATGGATTATCCTT+AGG 0.453217 8.4:-19517649 None:intergenic
ATGGGAGATGGAGGAGGTAC+AGG 0.459539 8.4:+19517187 MS.gene43216:CDS
GGTGCTGAATCACACGGTAT+AGG 0.460431 8.4:-19519079 None:intergenic
GAATGGTTGTATCCTGCTAT+GGG 0.460676 8.4:-19518291 None:intergenic
TAAACAGCTCGCCTGAATAA+GGG 0.463660 8.4:-19516174 None:intergenic
GCGTTCTTCTCGAGTCAAAT+GGG 0.465575 8.4:+19516601 MS.gene43216:CDS
TCCATAGAAGCTACTCAAAT+GGG 0.467430 8.4:-19519287 None:intergenic
TCATTGTTACGTAATGCAAC+AGG 0.467645 8.4:-19516487 None:intergenic
GATACTCAATTTGGAATGAT+GGG 0.468125 8.4:+19516724 MS.gene43216:CDS
AATTGTGATCCATCAAAGAT+AGG 0.471816 8.4:+19516859 MS.gene43216:CDS
GGCAAATTCTTCTCAATCAA+AGG 0.479253 8.4:+19516249 MS.gene43216:CDS
ATACTCTTTGGACCTAATGA+TGG 0.480182 8.4:+19517148 MS.gene43216:CDS
GCATCAGAAGTTAGTAAACT+TGG 0.481138 8.4:+19517604 MS.gene43216:CDS
TCCTTACAAGGTCAAGGAGG+TGG 0.481994 8.4:+19516349 MS.gene43216:CDS
TTACACTTGCTCACAGGAAA+AGG 0.483859 8.4:+19519219 MS.gene43216:CDS
CCAAGGATTTCTTAATCCTA+AGG 0.484371 8.4:-19517701 None:intergenic
AGATCTGGAGCCTGAAATAT+GGG 0.484427 8.4:+19517678 MS.gene43216:CDS
AACGCGCGGTTTGAGCCATC+AGG 0.489900 8.4:-19516583 None:intergenic
ATTCAGTGAAGATAAAGATC+TGG 0.490361 8.4:+19517663 MS.gene43216:CDS
CAAGTGTAACTGCAGCGACT+TGG 0.493915 8.4:-19519205 None:intergenic
GATAAATGGTCTGGCTGCAA+TGG 0.494029 8.4:+19516811 MS.gene43216:CDS
AATCGTGTGCACAGCTGAAA+GGG 0.494341 8.4:-19519054 None:intergenic
AATATTCTTCTCACCTCAGT+TGG 0.497203 8.4:-19517085 None:intergenic
CACCGGGTCCCAGCCATCCT+CGG 0.497508 8.4:+19516945 MS.gene43216:CDS
CAAAGCACGGGAACTGATCT+CGG 0.501259 8.4:-19516211 None:intergenic
TCCCCTTCCTTACAAGGTCA+AGG 0.506555 8.4:+19516343 MS.gene43216:CDS
TGAGAAGGAGAAGGAGAAGG+AGG 0.507214 8.4:-19519259 None:intergenic
GAAAAGATGTATCCAAGAGC+TGG 0.508362 8.4:-19519115 None:intergenic
GAATATACTGCTAATGGCAC+CGG 0.510299 8.4:+19516928 MS.gene43216:CDS
TTAAGGGATGTATTTCCTCC+AGG 0.512084 8.4:-19518249 None:intergenic
TGGGTATTTATACTTCATGA+TGG 0.512223 8.4:+19517168 MS.gene43216:CDS
TGATTTCAAAAGTGAGGCAC+AGG 0.514224 8.4:-19515336 None:intergenic
GGTGACTCTGTAGTAGTGAA+TGG 0.514388 8.4:-19518228 None:intergenic
TTGAGAAGAATTTGCCGGAA+TGG 0.521295 8.4:-19516242 None:intergenic
TTGGCAACTATTCCTGAAGA+AGG 0.522185 8.4:+19516634 MS.gene43216:CDS
ACTATTCCTGAAGAAGGATC+AGG 0.522978 8.4:+19516640 MS.gene43216:CDS
AATATGGTTGCTCATCCTGA+TGG 0.523113 8.4:+19516568 MS.gene43216:CDS
TCCCAAATAAACAAGAATGA+AGG 0.524278 8.4:+19518312 MS.gene43216:CDS
TGCCTTGAGAAAATTGGGAA+TGG 0.524502 8.4:+19516535 MS.gene43216:CDS
TTATACTTCATGATGGGAGA+TGG 0.525044 8.4:+19517175 MS.gene43216:CDS
CCTCCTTGACCTTGTAAGGA+AGG 0.527037 8.4:-19516346 None:intergenic
CCTTAGGATTAAGAAATCCT+TGG 0.528645 8.4:+19517701 MS.gene43216:CDS
GCATGAGAAGGAGAAGGAGA+AGG 0.529029 8.4:-19519262 None:intergenic
TTTCTCAAGGCATAAGCCAT+GGG 0.529664 8.4:-19516524 None:intergenic
ATGGTTGTATCCTGCTATGG+GGG 0.535626 8.4:-19518289 None:intergenic
CACCGTGTTGAGATGTAAAT+GGG 0.536248 8.4:-19517120 None:intergenic
GAGGTGGATCTCATCACAAA+AGG 0.536322 8.4:+19518168 MS.gene43216:CDS
CTCAAATGGGTTGCATGAGA+AGG 0.539780 8.4:-19519274 None:intergenic
TACCGAGGATGGCTGGGACC+CGG 0.540836 8.4:-19516947 None:intergenic
GGGTAGCTACTCAATTCCTA+AGG 0.541434 8.4:+19517633 MS.gene43216:CDS
CCGCGTAAAGATCAGCATAC+AGG 0.543963 8.4:-19518970 None:intergenic
CTCCTTGACCTTGTAAGGAA+GGG 0.545146 8.4:-19516345 None:intergenic
GGGTATTTATACTTCATGAT+GGG 0.547309 8.4:+19517169 MS.gene43216:CDS
CAAAACAAGAAATCACTGCT+TGG 0.552540 8.4:+19517229 MS.gene43216:CDS
TTCTTCTCAATCAAAGGCAT+CGG 0.554545 8.4:+19516255 MS.gene43216:CDS
GATGTATCCAAGAGCTGGAA+GGG 0.554726 8.4:-19519110 None:intergenic
GAATCGTGTGCACAGCTGAA+AGG 0.555049 8.4:-19519055 None:intergenic
TCCTTGACCTTGTAAGGAAG+GGG 0.555746 8.4:-19516344 None:intergenic
AAGGATCAGCATCAATTACC+GGG 0.560639 8.4:+19518331 MS.gene43216:CDS
GCAGGATCTTTATGAAGAGG+TGG 0.561327 8.4:+19518152 MS.gene43216:intron
TGACTTCTGCTCTGAAGTAT+GGG 0.561516 8.4:+19516282 MS.gene43216:CDS
TCAAATGGGGAAAGTTTGGT+TGG 0.561969 8.4:+19516615 MS.gene43216:CDS
TCAAAGATAGGTACTAGTAA+TGG 0.562846 8.4:+19516871 MS.gene43216:CDS
AATGCGTACCGAGGATGGCT+GGG 0.565129 8.4:-19516953 None:intergenic
ATGGCAGAATTGCAAAGCAC+GGG 0.566834 8.4:-19516223 None:intergenic
TACTCTTTGGACCTAATGAT+GGG 0.568455 8.4:+19517149 MS.gene43216:CDS
CTGATCCTTGCATGTTTGGA+AGG 0.568512 8.4:+19518376 MS.gene43216:CDS
CTGCAGTTACACTTGCTCAC+AGG 0.577089 8.4:+19519213 MS.gene43216:CDS
CAAAAGGTGGAAACTATGGC+TGG 0.578685 8.4:+19518184 MS.gene43216:CDS
CAAGAAATCACTGCTTGGAA+AGG 0.578885 8.4:+19517234 MS.gene43216:CDS
TGATCAGTTAGATCAACAAA+GGG 0.581281 8.4:-19516691 None:intergenic
ATCAATCAGTATGCTTTGGG+GGG 0.581486 8.4:+19516461 MS.gene43216:CDS
TTTGCAGGATCTTTATGAAG+AGG 0.581556 8.4:+19518149 MS.gene43216:intron
TTGATCAGTTAGATCAACAA+AGG 0.586446 8.4:-19516692 None:intergenic
CCTGTATGCTGATCTTTACG+CGG 0.587393 8.4:+19518970 MS.gene43216:CDS
TACTTCATGATGGGAGATGG+AGG 0.588622 8.4:+19517178 MS.gene43216:CDS
AATGGTTGTATCCTGCTATG+GGG 0.592212 8.4:-19518290 None:intergenic
AATGGCAGAATTGCAAAGCA+CGG 0.592355 8.4:-19516224 None:intergenic
GTTAGTAAACTTGGACTTTG+GGG 0.593490 8.4:+19517613 MS.gene43216:CDS
AATCAATCAGTATGCTTTGG+GGG 0.596322 8.4:+19516460 MS.gene43216:CDS
TTTGAAATCAATACTTTGTG+CGG 0.598518 8.4:+19515349 MS.gene43216:CDS
AAGTATTGATTTCAAAAGTG+AGG 0.602252 8.4:-19515342 None:intergenic
AAACATGCAAGGATCAGTCA+TGG 0.603030 8.4:-19518370 None:intergenic
GTGAGAAGAATATTTACCAT+GGG 0.612605 8.4:+19517094 MS.gene43216:CDS
TTCATGATGGGAGATGGAGG+AGG 0.613543 8.4:+19517181 MS.gene43216:CDS
GTGGATCTCATCACAAAAGG+TGG 0.614554 8.4:+19518171 MS.gene43216:CDS
TGGGTTGCATGAGAAGGAGA+AGG 0.614869 8.4:-19519268 None:intergenic
TATGGCTGGCGTGTATATGA+GGG 0.615153 8.4:+19518198 MS.gene43216:CDS
AGATGTATCCAAGAGCTGGA+AGG 0.615410 8.4:-19519111 None:intergenic
AATATACTGCTAATGGCACC+GGG 0.617544 8.4:+19516929 MS.gene43216:CDS
GAATCAAAACTGCATCGCCA+AGG 0.619294 8.4:-19517718 None:intergenic
TCAAGGCATAAGCCATGGGG+AGG 0.619341 8.4:-19516520 None:intergenic
TCAATCAGTATGCTTTGGGG+GGG 0.625661 8.4:+19516462 MS.gene43216:CDS
TTCACTACTACAGAGTCACC+TGG 0.628037 8.4:+19518231 MS.gene43216:CDS
CAGTACCTTCCAAACATGCA+AGG 0.628525 8.4:-19518381 None:intergenic
TAATCAATCAGTATGCTTTG+GGG 0.629409 8.4:+19516459 MS.gene43216:CDS
AGAGCTGGAAGGGAGCTACT+GGG 0.631308 8.4:-19519100 None:intergenic
GTAGAAATGCGTACCGAGGA+TGG 0.634150 8.4:-19516958 None:intergenic
CAAGGCATAAGCCATGGGGA+GGG 0.635947 8.4:-19516519 None:intergenic
GGTGAGAAGAATATTTACCA+TGG 0.637027 8.4:+19517093 MS.gene43216:CDS
GAGACTATTATCCCTCCCCA+TGG 0.639990 8.4:+19516508 MS.gene43216:CDS
TGGTTGTATCCTGCTATGGG+GGG 0.641288 8.4:-19518288 None:intergenic
ACTATTTGAAGGATCTTCGG+TGG 0.642163 8.4:-19519008 None:intergenic
AGATGTAAATGGGAGTCCCA+TGG 0.648481 8.4:-19517110 None:intergenic
AGCGACTTGGACGAACAACT+CGG 0.648898 8.4:-19519192 None:intergenic
CTGTATGCTGATCTTTACGC+GGG 0.649982 8.4:+19518971 MS.gene43216:CDS
GGATCGATAAACATATCCCC+CGG 0.650551 8.4:-19518349 None:intergenic
CTCCCATTTACATCTCAACA+CGG 0.653139 8.4:+19517118 MS.gene43216:CDS
CGTTCTTCTCGAGTCAAATG+GGG 0.658120 8.4:+19516602 MS.gene43216:CDS
ATTCCTGAAGAAGGATCAGG+AGG 0.666234 8.4:+19516643 MS.gene43216:CDS
TACAAGTGCTAAACCAACTG+AGG 0.669482 8.4:+19517072 MS.gene43216:CDS
TTCTCAAGGCATAAGCCATG+GGG 0.670920 8.4:-19516523 None:intergenic
CACGGGAACTGATCTCGGTG+TGG 0.672507 8.4:-19516206 None:intergenic
CCTTCCTTACAAGGTCAAGG+AGG 0.681764 8.4:+19516346 MS.gene43216:CDS
AGGATCAGCATCAATTACCG+GGG 0.688826 8.4:+19518332 MS.gene43216:CDS
ATAACAGTTTGATATTGACA+CGG 0.693697 8.4:-19516901 None:intergenic
CTACTGGGTGCTGAATCACA+CGG 0.700186 8.4:-19519085 None:intergenic
GGATCAGCATCAATTACCGG+GGG 0.710549 8.4:+19518333 MS.gene43216:CDS
CAACCAAACTGAATGAACTG+TGG 0.737606 8.4:+19516392 MS.gene43216:CDS
TTTGACTCGAGAAGAACGCG+CGG 0.754652 8.4:-19516597 None:intergenic
ACTACTACAGAGTCACCTGG+AGG 0.758418 8.4:+19518234 MS.gene43216:CDS
CCATTTACATCTCAACACGG+TGG 0.793402 8.4:+19517121 MS.gene43216:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAACTGTAATAAAGATAAA+TGG + chr8.4:19516797-19516816 MS.gene43216:CDS 15.0%
!! TTATTAAAAGTTTATGATTG+AGG - chr8.4:19518080-19518099 None:intergenic 15.0%
!!! AAAGAAAAAGTATATATTCA+AGG + chr8.4:19515419-19515438 MS.gene43216:intron 15.0%
!!! CAATTGATAGTTATTAATAA+GGG - chr8.4:19515635-19515654 None:intergenic 15.0%
!!! GATAAACAAATCTTTTAAAA+GGG - chr8.4:19515556-19515575 None:intergenic 15.0%
!!! TGAATATATACTTTTTCTTT+AGG - chr8.4:19515419-19515438 None:intergenic 15.0%
!! AAACTATTGTTTCATATGTA+TGG - chr8.4:19516985-19517004 None:intergenic 20.0%
!! AAATATAATTGTCAATAGTG+AGG - chr8.4:19517566-19517585 None:intergenic 20.0%
!! AATTGGATTTATGGATTTAA+GGG - chr8.4:19518268-19518287 None:intergenic 20.0%
!! ATGAAACAATAGTTTCTATA+AGG + chr8.4:19516990-19517009 MS.gene43216:intron 20.0%
!! CCTTATTAATAACTATCAAT+TGG + chr8.4:19515633-19515652 MS.gene43216:intron 20.0%
!! TAAAATGTTCTACCAATAAT+TGG + chr8.4:19517445-19517464 MS.gene43216:intron 20.0%
!! TAGAACTATCTAATCATTAT+CGG + chr8.4:19517039-19517058 MS.gene43216:intron 20.0%
!! TTATTAATAAGGGATGTATT+TGG - chr8.4:19515625-19515644 None:intergenic 20.0%
!!! AACTTTTAATAACTTCTACA+AGG + chr8.4:19518088-19518107 MS.gene43216:intron 20.0%
!!! ATTCTTTTTGTTCTCTTAAA+CGG - chr8.4:19518019-19518038 None:intergenic 20.0%
!!! ATTTGTACAGTCTTATATTA+AGG - chr8.4:19515579-19515598 None:intergenic 20.0%
!!! CCAATTGATAGTTATTAATA+AGG - chr8.4:19515636-19515655 None:intergenic 20.0%
!!! GGATAAACAAATCTTTTAAA+AGG - chr8.4:19515557-19515576 None:intergenic 20.0%
!!! GTTTATTTTGATACTCAATT+TGG + chr8.4:19516715-19516734 MS.gene43216:CDS 20.0%
!!! TCATCTTAAAAATTTTGGTT+AGG - chr8.4:19518560-19518579 None:intergenic 20.0%
!!! TGAACTCATCTTAAAAATTT+TGG - chr8.4:19518565-19518584 None:intergenic 20.0%
!!! TTGGTAGAACATTTTATAAA+AGG - chr8.4:19517441-19517460 None:intergenic 20.0%
!!! TTTGTACAGTCTTATATTAA+GGG - chr8.4:19515578-19515597 None:intergenic 20.0%
! AAATTAGGGTTAATGAAACA+TGG + chr8.4:19517872-19517891 MS.gene43216:intron 25.0%
! AAGTAATGGTTAATGAAACT+CGG - chr8.4:19517946-19517965 None:intergenic 25.0%
! AAGTATAAATACCCATCATT+AGG - chr8.4:19517163-19517182 None:intergenic 25.0%
! AATAATCAATCAGTATGCTT+TGG + chr8.4:19516457-19516476 MS.gene43216:CDS 25.0%
! ATAACAGTTTGATATTGACA+CGG - chr8.4:19516904-19516923 None:intergenic 25.0%
! ATAATCAATCAGTATGCTTT+GGG + chr8.4:19516458-19516477 MS.gene43216:CDS 25.0%
! ATATGCATAAAAAGTTCCAA+AGG + chr8.4:19515760-19515779 MS.gene43216:intron 25.0%
! ATATTTATCATGAACCTTTC+AGG + chr8.4:19517580-19517599 MS.gene43216:intron 25.0%
! ATTGTTGAACTGAAAAAAAG+TGG - chr8.4:19516101-19516120 None:intergenic 25.0%
! CTAGATTCTATTCAACTATA+TGG - chr8.4:19517486-19517505 None:intergenic 25.0%
! GAATTGGATTTATGGATTTA+AGG - chr8.4:19518269-19518288 None:intergenic 25.0%
! TAATATGAAAAACCAGATGA+AGG - chr8.4:19518430-19518449 None:intergenic 25.0%
! TATGCATAAAAAGTTCCAAA+GGG + chr8.4:19515761-19515780 MS.gene43216:intron 25.0%
! TGTAATAAAGATAAATGGTC+TGG + chr8.4:19516802-19516821 MS.gene43216:CDS 25.0%
!! AAAGCATACTGATTGATTAT+TGG - chr8.4:19516458-19516477 None:intergenic 25.0%
!! ACAGCATCATATTCTTTTAT+AGG + chr8.4:19515478-19515497 MS.gene43216:intron 25.0%
!! ATCCTTCATTCTTGTTTATT+TGG - chr8.4:19518317-19518336 None:intergenic 25.0%
!! CTATTTTCTCAAACTATTAC+CGG + chr8.4:19517336-19517355 MS.gene43216:intron 25.0%
!! TCCTTCATTCTTGTTTATTT+GGG - chr8.4:19518316-19518335 None:intergenic 25.0%
!! TTGGATACATCTTTTCATTT+GGG + chr8.4:19519122-19519141 MS.gene43216:CDS 25.0%
!! TTTGAAATCAATACTTTGTG+CGG + chr8.4:19515349-19515368 MS.gene43216:CDS 25.0%
!!! AACGATTTTTGTAAAGCATT+TGG + chr8.4:19516424-19516443 MS.gene43216:CDS 25.0%
!!! AAGTATTGATTTCAAAAGTG+AGG - chr8.4:19515345-19515364 None:intergenic 25.0%
!!! TTGTTTTGGGAAAAATTGTA+TGG - chr8.4:19517217-19517236 None:intergenic 25.0%
AACATCTCCACAAAAAAAGT+AGG - chr8.4:19517755-19517774 None:intergenic 30.0%
AACTGAAAAAAAGTGGTTAC+TGG - chr8.4:19516094-19516113 None:intergenic 30.0%
AAGTTAGTAAACTTGGACTT+TGG + chr8.4:19517611-19517630 MS.gene43216:CDS 30.0%
AATTGTGATCCATCAAAGAT+AGG + chr8.4:19516859-19516878 MS.gene43216:CDS 30.0%
AGATCTTTATCTTCACTGAA+TGG - chr8.4:19517664-19517683 None:intergenic 30.0%
AGTTAGTAAACTTGGACTTT+GGG + chr8.4:19517612-19517631 MS.gene43216:CDS 30.0%
ATAATTGGTCAAACAAATGC+TGG + chr8.4:19517460-19517479 MS.gene43216:intron 30.0%
ATTCAGTGAAGATAAAGATC+TGG + chr8.4:19517663-19517682 MS.gene43216:CDS 30.0%
ATTGCAGAATATACTGCTAA+TGG + chr8.4:19516922-19516941 MS.gene43216:CDS 30.0%
CAATCTAAGTCACGATATAA+AGG - chr8.4:19516020-19516039 None:intergenic 30.0%
GAATGGATCTTATCTCAATA+TGG + chr8.4:19516552-19516571 MS.gene43216:CDS 30.0%
GCATTTGTTTGACCAATTAT+TGG - chr8.4:19517460-19517479 None:intergenic 30.0%
GGGTATTTATACTTCATGAT+GGG + chr8.4:19517169-19517188 MS.gene43216:CDS 30.0%
GTGAAATTTCCACTATTTGA+AGG - chr8.4:19519022-19519041 None:intergenic 30.0%
GTGAGAAGAATATTTACCAT+GGG + chr8.4:19517094-19517113 MS.gene43216:CDS 30.0%
GTTTATATTCTTGCAAGTTC+TGG + chr8.4:19519163-19519182 MS.gene43216:CDS 30.0%
TAATCAATCAGTATGCTTTG+GGG + chr8.4:19516459-19516478 MS.gene43216:CDS 30.0%
TCAAAGATAGGTACTAGTAA+TGG + chr8.4:19516871-19516890 MS.gene43216:CDS 30.0%
TCCCAAATAAACAAGAATGA+AGG + chr8.4:19518312-19518331 MS.gene43216:CDS 30.0%
TCTATCTAAATTCTGTCACT+CGG + chr8.4:19518588-19518607 MS.gene43216:intron 30.0%
TGAACACACTTATACACAAA+AGG + chr8.4:19515678-19515697 MS.gene43216:intron 30.0%
TGATCAGTTAGATCAACAAA+GGG - chr8.4:19516694-19516713 None:intergenic 30.0%
TGGGTATTTATACTTCATGA+TGG + chr8.4:19517168-19517187 MS.gene43216:CDS 30.0%
TTACTAGTACCTATCTTTGA+TGG - chr8.4:19516871-19516890 None:intergenic 30.0%
TTGATCAGTTAGATCAACAA+AGG - chr8.4:19516695-19516714 None:intergenic 30.0%
TTTGATTGAGAAGAATTTGC+CGG - chr8.4:19516250-19516269 None:intergenic 30.0%
! AAAACATCGGTTACTAGTAT+AGG - chr8.4:19515896-19515915 None:intergenic 30.0%
! AAGCCTTTTCTTTTCCTTTT+TGG + chr8.4:19518404-19518423 MS.gene43216:intron 30.0%
! ACAACTGCGATTTAAAACAT+CGG - chr8.4:19515909-19515928 None:intergenic 30.0%
! AGTTAAGGACGTTTGAAATT+AGG + chr8.4:19517857-19517876 MS.gene43216:intron 30.0%
! CATCCAAATTTTGCAAACAA+CGG + chr8.4:19516757-19516776 MS.gene43216:CDS 30.0%
! CATTCTTGTTTATTTGGGAA+TGG - chr8.4:19518311-19518330 None:intergenic 30.0%
! CTAACTTTGTTTGTTTGTAG+AGG + chr8.4:19516146-19516165 MS.gene43216:intron 30.0%
! CTAATCATTATCGGATTTTC+AGG + chr8.4:19517048-19517067 MS.gene43216:intron 30.0%
! CTATAAGGTGTTTAATTCAG+TGG + chr8.4:19517005-19517024 MS.gene43216:intron 30.0%
! CTTGGATACATCTTTTCATT+TGG + chr8.4:19519121-19519140 MS.gene43216:CDS 30.0%
! GATACTCAATTTGGAATGAT+GGG + chr8.4:19516724-19516743 MS.gene43216:CDS 30.0%
! GTTAAGGACGTTTGAAATTA+GGG + chr8.4:19517858-19517877 MS.gene43216:intron 30.0%
! TCCAAAGGGTCTTATAAATA+GGG + chr8.4:19515775-19515794 MS.gene43216:intron 30.0%
! TGATACTCAATTTGGAATGA+TGG + chr8.4:19516723-19516742 MS.gene43216:CDS 30.0%
! TTCCAAAGGGTCTTATAAAT+AGG + chr8.4:19515774-19515793 MS.gene43216:intron 30.0%
!! ATGAGTTGTTTCTCATTGAT+TGG + chr8.4:19518735-19518754 MS.gene43216:intron 30.0%
!! GATTTTTGTAAAGCATTTGG+TGG + chr8.4:19516427-19516446 MS.gene43216:CDS 30.0%
!! GTTGATAATGAACGAAGTAA+TGG - chr8.4:19517960-19517979 None:intergenic 30.0%
!! TAGTTACACAATTGATTTGC+AGG + chr8.4:19518134-19518153 MS.gene43216:intron 30.0%
!!! AAACCTTCCTACTTTTTTTG+TGG + chr8.4:19517745-19517764 MS.gene43216:CDS 30.0%
!!! AAGCAGTGATTTCTTGTTTT+GGG - chr8.4:19517230-19517249 None:intergenic 30.0%
!!! CTTTTATAGGAAAGTGTTTG+TGG + chr8.4:19515491-19515510 MS.gene43216:intron 30.0%
!!! GGACTTATTTTAAAACGCTT+TGG + chr8.4:19518934-19518953 MS.gene43216:intron 30.0%
!!! TACTTTTTTTGTGGAGATGT+TGG + chr8.4:19517754-19517773 MS.gene43216:CDS 30.0%
AAATCAATACTTTGTGCGGT+AGG + chr8.4:19515353-19515372 MS.gene43216:intron 35.0%
AACACACCAACTGTAGTATT+TGG - chr8.4:19518833-19518852 None:intergenic 35.0%
AACTTCCTTAACAGAGAACT+CGG - chr8.4:19517982-19518001 None:intergenic 35.0%
AAGTGTTTGTACTACTCACT+TGG - chr8.4:19517286-19517305 None:intergenic 35.0%
AAGTTAGCTAGCTACATACA+AGG - chr8.4:19516133-19516152 None:intergenic 35.0%
AATATTCTTCTCACCTCAGT+TGG - chr8.4:19517088-19517107 None:intergenic 35.0%
AATCAATCAGTATGCTTTGG+GGG + chr8.4:19516460-19516479 MS.gene43216:CDS 35.0%
AGGCCAAAAAGGAAAAGAAA+AGG - chr8.4:19518410-19518429 None:intergenic 35.0%
AGTTAAACGAAGCGAAGAAT+CGG - chr8.4:19516783-19516802 None:intergenic 35.0%
ATACTCTTTGGACCTAATGA+TGG + chr8.4:19517148-19517167 MS.gene43216:CDS 35.0%
ATCACAAAAGGTGGAAACTA+TGG + chr8.4:19518180-19518199 MS.gene43216:CDS 35.0%
ATCCATAGAAGCTACTCAAA+TGG - chr8.4:19519291-19519310 None:intergenic 35.0%
ATGTTTGCTCATATTTGCCA+TGG + chr8.4:19518912-19518931 MS.gene43216:intron 35.0%
CAAAACAAGAAATCACTGCT+TGG + chr8.4:19517229-19517248 MS.gene43216:CDS 35.0%
CCAAGGATTTCTTAATCCTA+AGG - chr8.4:19517704-19517723 None:intergenic 35.0%
CCTTAGGATTAAGAAATCCT+TGG + chr8.4:19517701-19517720 MS.gene43216:CDS 35.0%
CTATCTAAATTCTGTCACTC+GGG + chr8.4:19518589-19518608 MS.gene43216:intron 35.0%
GCAGCTTTCATCTTTATTGT+TGG + chr8.4:19519321-19519340 MS.gene43216:CDS 35.0%
GCATCAGAAGTTAGTAAACT+TGG + chr8.4:19517604-19517623 MS.gene43216:CDS 35.0%
GCTTATGCCTTGAGAAAATT+GGG + chr8.4:19516530-19516549 MS.gene43216:CDS 35.0%
GGCAAATTCTTCTCAATCAA+AGG + chr8.4:19516249-19516268 MS.gene43216:CDS 35.0%
GGTGAGAAGAATATTTACCA+TGG + chr8.4:19517093-19517112 MS.gene43216:CDS 35.0%
GGTTAATGAAACATGGAGTT+TGG + chr8.4:19517879-19517898 MS.gene43216:intron 35.0%
GTCACAGAAAGAATAAGATG+TGG + chr8.4:19518465-19518484 MS.gene43216:intron 35.0%
GTGATTCTCTACAATGTTGA+GGG - chr8.4:19518808-19518827 None:intergenic 35.0%
GTTAATGAGTACGGCAATAT+TGG + chr8.4:19517901-19517920 MS.gene43216:intron 35.0%
GTTAGTAAACTTGGACTTTG+GGG + chr8.4:19517613-19517632 MS.gene43216:CDS 35.0%
TAACACTAACATGTCAACAC+CGG - chr8.4:19517358-19517377 None:intergenic 35.0%
TACTCTTTGGACCTAATGAT+GGG + chr8.4:19517149-19517168 MS.gene43216:CDS 35.0%
TCATTGTTACGTAATGCAAC+AGG - chr8.4:19516490-19516509 None:intergenic 35.0%
TCCACTATTTGAAGGATCTT+CGG - chr8.4:19519014-19519033 None:intergenic 35.0%
TCCATAGAAGCTACTCAAAT+GGG - chr8.4:19519290-19519309 None:intergenic 35.0%
TCCCTATTTATAAGACCCTT+TGG - chr8.4:19515779-19515798 None:intergenic 35.0%
TCTCCACAAAAAAAGTAGGA+AGG - chr8.4:19517751-19517770 None:intergenic 35.0%
TCTCTGTTAAGGAAGTTCAA+TGG + chr8.4:19517985-19518004 MS.gene43216:intron 35.0%
TGGAGTTTGGTTAATGAGTA+CGG + chr8.4:19517892-19517911 MS.gene43216:intron 35.0%
TGTGATTCTTCGGAATGTTT+AGG - chr8.4:19515947-19515966 None:intergenic 35.0%
TGTTTGCTCATATTTGCCAT+GGG + chr8.4:19518913-19518932 MS.gene43216:intron 35.0%
TTCATTCAGTTTGGTTGCAT+TGG - chr8.4:19516389-19516408 None:intergenic 35.0%
TTTCAGTTGTGGTCATGATT+TGG + chr8.4:19518852-19518871 MS.gene43216:intron 35.0%
TTTGCAGGATCTTTATGAAG+AGG + chr8.4:19518149-19518168 MS.gene43216:intron 35.0%
! ATCCATTCCCAATTTTCTCA+AGG - chr8.4:19516540-19516559 None:intergenic 35.0%
! TTATACTTCATGATGGGAGA+TGG + chr8.4:19517175-19517194 MS.gene43216:CDS 35.0%
! TTCTTCTCAATCAAAGGCAT+CGG + chr8.4:19516255-19516274 MS.gene43216:CDS 35.0%
!! CAAGCAGTGATTTCTTGTTT+TGG - chr8.4:19517231-19517250 None:intergenic 35.0%
!! TCACTGAATGGATTATCCTT+AGG - chr8.4:19517652-19517671 None:intergenic 35.0%
!!! GCGTTTTAAAATAAGTCCCA+TGG - chr8.4:19518932-19518951 None:intergenic 35.0%
AAACATGCAAGGATCAGTCA+TGG - chr8.4:19518373-19518392 None:intergenic 40.0%
AAACCAGATGAAGGCCAAAA+AGG - chr8.4:19518421-19518440 None:intergenic 40.0%
AAATGCAGCTTGTAAGGTGA+AGG - chr8.4:19518521-19518540 None:intergenic 40.0%
AAGGATCAGCATCAATTACC+GGG + chr8.4:19518331-19518350 MS.gene43216:CDS 40.0%
AATATACTGCTAATGGCACC+GGG + chr8.4:19516929-19516948 MS.gene43216:CDS 40.0%
AATATGGTTGCTCATCCTGA+TGG + chr8.4:19516568-19516587 MS.gene43216:CDS 40.0%
AATCCTAAGGCCCATATTTC+AGG - chr8.4:19517691-19517710 None:intergenic 40.0%
AATGCAGCTTGTAAGGTGAA+GGG - chr8.4:19518520-19518539 None:intergenic 40.0%
AATGGCAGAATTGCAAAGCA+CGG - chr8.4:19516227-19516246 None:intergenic 40.0%
AATGGTTGTATCCTGCTATG+GGG - chr8.4:19518293-19518312 None:intergenic 40.0%
ACCCATTTGAGTAGCTTCTA+TGG + chr8.4:19519286-19519305 MS.gene43216:CDS 40.0%
ACCGAAGATCCTTCAAATAG+TGG + chr8.4:19519010-19519029 MS.gene43216:CDS 40.0%
ACGAAGTGAGTAGCAAAGAT+TGG + chr8.4:19515798-19515817 MS.gene43216:intron 40.0%
ACTATTCCTGAAGAAGGATC+AGG + chr8.4:19516640-19516659 MS.gene43216:CDS 40.0%
ACTATTTGAAGGATCTTCGG+TGG - chr8.4:19519011-19519030 None:intergenic 40.0%
AGTACTACGCAAAAGGTCTA+GGG - chr8.4:19515825-19515844 None:intergenic 40.0%
ATCAACCGAGTTCTCTGTTA+AGG + chr8.4:19517974-19517993 MS.gene43216:intron 40.0%
ATGACTGATCCTTGCATGTT+TGG + chr8.4:19518372-19518391 MS.gene43216:CDS 40.0%
ATGCTTTACATGTCCACTAC+AGG + chr8.4:19518614-19518633 MS.gene43216:intron 40.0%
CAACCAAACTGAATGAACTG+TGG + chr8.4:19516392-19516411 MS.gene43216:CDS 40.0%
CAAGAAATCACTGCTTGGAA+AGG + chr8.4:19517234-19517253 MS.gene43216:CDS 40.0%
CACCGTGTTGAGATGTAAAT+GGG - chr8.4:19517123-19517142 None:intergenic 40.0%
CCATACAAATGCAGCTTGTA+AGG - chr8.4:19518527-19518546 None:intergenic 40.0%
CCTTACAAGCTGCATTTGTA+TGG + chr8.4:19518524-19518543 MS.gene43216:intron 40.0%
CGAAGTGAGTAGCAAAGATT+GGG + chr8.4:19515799-19515818 MS.gene43216:intron 40.0%
CGCATAAGACTGTGATTCTT+CGG - chr8.4:19515957-19515976 None:intergenic 40.0%
CGTGATTCTCTACAATGTTG+AGG - chr8.4:19518809-19518828 None:intergenic 40.0%
CTCCCATTTACATCTCAACA+CGG + chr8.4:19517118-19517137 MS.gene43216:CDS 40.0%
GAAAAAAAGTGGTTACTGGC+AGG - chr8.4:19516090-19516109 None:intergenic 40.0%
GAAAAGATGTATCCAAGAGC+TGG - chr8.4:19519118-19519137 None:intergenic 40.0%
GAAGGATCAGCATCAATTAC+CGG + chr8.4:19518330-19518349 MS.gene43216:CDS 40.0%
GAATATACTGCTAATGGCAC+CGG + chr8.4:19516928-19516947 MS.gene43216:CDS 40.0%
GAATGGTTGTATCCTGCTAT+GGG - chr8.4:19518294-19518313 None:intergenic 40.0%
GATTGATGCAGCCTCATTTA+CGG + chr8.4:19515976-19515995 MS.gene43216:intron 40.0%
GGCTTATGCCTTGAGAAAAT+TGG + chr8.4:19516529-19516548 MS.gene43216:CDS 40.0%
GGTTAATGAAACTCGGTAAG+TGG - chr8.4:19517939-19517958 None:intergenic 40.0%
TAAACAGCTCGCCTGAATAA+GGG - chr8.4:19516177-19516196 None:intergenic 40.0%
TAAACCTGCAACGCTAGTTA+AGG + chr8.4:19517842-19517861 MS.gene43216:intron 40.0%
TAACTTCTGATGCACCTGAA+AGG - chr8.4:19517597-19517616 None:intergenic 40.0%
TACAAGTGCTAAACCAACTG+AGG + chr8.4:19517072-19517091 MS.gene43216:CDS 40.0%
TATGGGGGGAATTGGATTTA+TGG - chr8.4:19518277-19518296 None:intergenic 40.0%
TCAAATGGGGAAAGTTTGGT+TGG + chr8.4:19516615-19516634 MS.gene43216:CDS 40.0%
TCACGACCAAATACTACAGT+TGG + chr8.4:19518824-19518843 MS.gene43216:intron 40.0%
TGATTTCAAAAGTGAGGCAC+AGG - chr8.4:19515339-19515358 None:intergenic 40.0%
TGCCTTGAGAAAATTGGGAA+TGG + chr8.4:19516535-19516554 MS.gene43216:CDS 40.0%
TGCTTTACATGTCCACTACA+GGG + chr8.4:19518615-19518634 MS.gene43216:intron 40.0%
TGTCTCTGTAACCGTAAATG+AGG - chr8.4:19515990-19516009 None:intergenic 40.0%
TTAAGGGATGTATTTCCTCC+AGG - chr8.4:19518252-19518271 None:intergenic 40.0%
TTACACTTGCTCACAGGAAA+AGG + chr8.4:19519219-19519238 MS.gene43216:CDS 40.0%
TTATTCAGGCGAGCTGTTTA+CGG + chr8.4:19516177-19516196 MS.gene43216:CDS 40.0%
TTGAGAAGAATTTGCCGGAA+TGG - chr8.4:19516245-19516264 None:intergenic 40.0%
TTGCCACAGTTCATTCAGTT+TGG - chr8.4:19516398-19516417 None:intergenic 40.0%
TTGGCAACTATTCCTGAAGA+AGG + chr8.4:19516634-19516653 MS.gene43216:CDS 40.0%
TTTCTCAAGGCATAAGCCAT+GGG - chr8.4:19516527-19516546 None:intergenic 40.0%
! AAAACGCTTTGGTGCATTTC+AGG + chr8.4:19518945-19518964 MS.gene43216:intron 40.0%
! AAGATCTGGAGCCTGAAATA+TGG + chr8.4:19517677-19517696 MS.gene43216:CDS 40.0%
! AGATCTGGAGCCTGAAATAT+GGG + chr8.4:19517678-19517697 MS.gene43216:CDS 40.0%
! ATCAATCAGTATGCTTTGGG+GGG + chr8.4:19516461-19516480 MS.gene43216:CDS 40.0%
! GCAAGAGTTAAGTATTGTGC+TGG - chr8.4:19518682-19518701 None:intergenic 40.0%
! TTGGTTGCATTGGTATTAGC+TGG - chr8.4:19516379-19516398 None:intergenic 40.0%
! TTTTCTCAAGGCATAAGCCA+TGG - chr8.4:19516528-19516547 None:intergenic 40.0%
! TTTTTGTGGAGATGTTGGAC+AGG + chr8.4:19517759-19517778 MS.gene43216:CDS 40.0%
!! AGTTGGTGTGTTTTCAGTTG+TGG + chr8.4:19518841-19518860 MS.gene43216:intron 40.0%
!! ATGAAGCATCGACAAAGACA+GGG - chr8.4:19517397-19517416 None:intergenic 40.0%
!! ATGACTTCTGCTCTGAAGTA+TGG + chr8.4:19516281-19516300 MS.gene43216:CDS 40.0%
!! GTTAGTGTTAGCTTTGTGCT+TGG + chr8.4:19517368-19517387 MS.gene43216:intron 40.0%
!! TATGAAGCATCGACAAAGAC+AGG - chr8.4:19517398-19517417 None:intergenic 40.0%
!! TGACTTCTGCTCTGAAGTAT+GGG + chr8.4:19516282-19516301 MS.gene43216:CDS 40.0%
!! TTTCCTTTTTGGCCTTCATC+TGG + chr8.4:19518415-19518434 MS.gene43216:intron 40.0%
AATCGTGTGCACAGCTGAAA+GGG - chr8.4:19519057-19519076 None:intergenic 45.0%
AGAAGGATCAGGAGGACAAT+TGG + chr8.4:19516651-19516670 MS.gene43216:CDS 45.0%
AGATGTAAATGGGAGTCCCA+TGG - chr8.4:19517113-19517132 None:intergenic 45.0%
AGATGTATCCAAGAGCTGGA+AGG - chr8.4:19519114-19519133 None:intergenic 45.0%
AGGATCAGCATCAATTACCG+GGG + chr8.4:19518332-19518351 MS.gene43216:CDS 45.0%
ATGGCAGAATTGCAAAGCAC+GGG - chr8.4:19516226-19516245 None:intergenic 45.0%
ATGGTTGTATCCTGCTATGG+GGG - chr8.4:19518292-19518311 None:intergenic 45.0%
ATTCCTGAAGAAGGATCAGG+AGG + chr8.4:19516643-19516662 MS.gene43216:CDS 45.0%
CAAAAGGTGGAAACTATGGC+TGG + chr8.4:19518184-19518203 MS.gene43216:CDS 45.0%
CACTGCTTGGAAAGGTTATG+AGG + chr8.4:19517242-19517261 MS.gene43216:CDS 45.0%
CAGTACCTTCCAAACATGCA+AGG - chr8.4:19518384-19518403 None:intergenic 45.0%
CATCAAATCGCTTGATGCTG+TGG + chr8.4:19518889-19518908 MS.gene43216:intron 45.0%
CCACCGTGTTGAGATGTAAA+TGG - chr8.4:19517124-19517143 None:intergenic 45.0%
CCATTTACATCTCAACACGG+TGG + chr8.4:19517121-19517140 MS.gene43216:CDS 45.0%
CCTGTATGCTGATCTTTACG+CGG + chr8.4:19518970-19518989 MS.gene43216:CDS 45.0%
CCTTGTAAGGAAGGGGAAAA+TGG - chr8.4:19516340-19516359 None:intergenic 45.0%
CGAGTCAAATGGGGAAAGTT+TGG + chr8.4:19516611-19516630 MS.gene43216:CDS 45.0%
CGGCCGTTGTTTGCAAAATT+TGG - chr8.4:19516763-19516782 None:intergenic 45.0%
CGTTCTTCTCGAGTCAAATG+GGG + chr8.4:19516602-19516621 MS.gene43216:CDS 45.0%
CTCCTTGACCTTGTAAGGAA+GGG - chr8.4:19516348-19516367 None:intergenic 45.0%
CTGATCCTTGCATGTTTGGA+AGG + chr8.4:19518376-19518395 MS.gene43216:CDS 45.0%
CTGTATGCTGATCTTTACGC+GGG + chr8.4:19518971-19518990 MS.gene43216:CDS 45.0%
GAATCAAAACTGCATCGCCA+AGG - chr8.4:19517721-19517740 None:intergenic 45.0%
GAATGCATGCGTCTTTCTTG+AGG + chr8.4:19518035-19518054 MS.gene43216:intron 45.0%
GAGGTGGATCTCATCACAAA+AGG + chr8.4:19518168-19518187 MS.gene43216:CDS 45.0%
GAGTACTACGCAAAAGGTCT+AGG - chr8.4:19515826-19515845 None:intergenic 45.0%
GATAAATGGTCTGGCTGCAA+TGG + chr8.4:19516811-19516830 MS.gene43216:CDS 45.0%
GATGTATCCAAGAGCTGGAA+GGG - chr8.4:19519113-19519132 None:intergenic 45.0%
GCAGGATCTTTATGAAGAGG+TGG + chr8.4:19518152-19518171 MS.gene43216:intron 45.0%
GCGTTCTTCTCGAGTCAAAT+GGG + chr8.4:19516601-19516620 MS.gene43216:CDS 45.0%
GCTAGCTACATACAAGGCAT+AGG - chr8.4:19516127-19516146 None:intergenic 45.0%
GCTTTGCAATTCTGCCATTC+CGG + chr8.4:19516228-19516247 MS.gene43216:CDS 45.0%
GGAATGGTTGTATCCTGCTA+TGG - chr8.4:19518295-19518314 None:intergenic 45.0%
GGATCGATAAACATATCCCC+CGG - chr8.4:19518352-19518371 None:intergenic 45.0%
GGGTAGCTACTCAATTCCTA+AGG + chr8.4:19517633-19517652 MS.gene43216:CDS 45.0%
GGTGACTCTGTAGTAGTGAA+TGG - chr8.4:19518231-19518250 None:intergenic 45.0%
GTAAACAGCTCGCCTGAATA+AGG - chr8.4:19516178-19516197 None:intergenic 45.0%
GTGGATCTCATCACAAAAGG+TGG + chr8.4:19518171-19518190 MS.gene43216:CDS 45.0%
TATGGCTGGCGTGTATATGA+GGG + chr8.4:19518198-19518217 MS.gene43216:CDS 45.0%
TCCTTGACCTTGTAAGGAAG+GGG - chr8.4:19516347-19516366 None:intergenic 45.0%
TTACATGTCCACTACAGGGA+CGG + chr8.4:19518619-19518638 MS.gene43216:intron 45.0%
TTCACTACTACAGAGTCACC+TGG + chr8.4:19518231-19518250 MS.gene43216:CDS 45.0%
TTCTCAAGGCATAAGCCATG+GGG - chr8.4:19516526-19516545 None:intergenic 45.0%
! CCATTTTCCCCTTCCTTACA+AGG + chr8.4:19516337-19516356 MS.gene43216:CDS 45.0%
! TACTTCATGATGGGAGATGG+AGG + chr8.4:19517178-19517197 MS.gene43216:CDS 45.0%
! TAGAGGTGTGACCCTTATTC+AGG + chr8.4:19516163-19516182 MS.gene43216:intron 45.0%
!! CTCAAATGGGTTGCATGAGA+AGG - chr8.4:19519277-19519296 None:intergenic 45.0%
!! CTGAAGGAGTACTACGCAAA+AGG - chr8.4:19515832-19515851 None:intergenic 45.0%
!! TCAATCAGTATGCTTTGGGG+GGG + chr8.4:19516462-19516481 MS.gene43216:CDS 45.0%
!!! TAAAATAAATATATGTTTTA+GGG - chr8.4:19515389-19515408 None:intergenic 5.0%
!!! TTAAAATAAATATATGTTTT+AGG - chr8.4:19515390-19515409 None:intergenic 5.0%
AACCCACGTTGAGACACTGA+AGG - chr8.4:19515848-19515867 None:intergenic 50.0%
AATCCAATTCCCCCCATAGC+AGG + chr8.4:19518279-19518298 MS.gene43216:CDS 50.0%
ACGTCCTTAACTAGCGTTGC+AGG - chr8.4:19517849-19517868 None:intergenic 50.0%
ACTACTACAGAGTCACCTGG+AGG + chr8.4:19518234-19518253 MS.gene43216:CDS 50.0%
ACTCCTTCAGTGTCTCAACG+TGG + chr8.4:19515842-19515861 MS.gene43216:intron 50.0%
CAAAGCACGGGAACTGATCT+CGG - chr8.4:19516214-19516233 None:intergenic 50.0%
CAAGTGTAACTGCAGCGACT+TGG - chr8.4:19519208-19519227 None:intergenic 50.0%
CACGGTGGTCAGATACTCTT+TGG + chr8.4:19517136-19517155 MS.gene43216:CDS 50.0%
CCGCGTAAAGATCAGCATAC+AGG - chr8.4:19518973-19518992 None:intergenic 50.0%
CCTCCTTGACCTTGTAAGGA+AGG - chr8.4:19516349-19516368 None:intergenic 50.0%
CCTTCCTTACAAGGTCAAGG+AGG + chr8.4:19516346-19516365 MS.gene43216:CDS 50.0%
CGCGTTCTTCTCGAGTCAAA+TGG + chr8.4:19516600-19516619 MS.gene43216:CDS 50.0%
CTATGGCTGGCGTGTATATG+AGG + chr8.4:19518197-19518216 MS.gene43216:CDS 50.0%
CTCCTTCAGTGTCTCAACGT+GGG + chr8.4:19515843-19515862 MS.gene43216:intron 50.0%
CTGCAGTTACACTTGCTCAC+AGG + chr8.4:19519213-19519232 MS.gene43216:CDS 50.0%
GAATCGTGTGCACAGCTGAA+AGG - chr8.4:19519058-19519077 None:intergenic 50.0%
GAGACTATTATCCCTCCCCA+TGG + chr8.4:19516508-19516527 MS.gene43216:CDS 50.0%
GAGCCTGAAATATGGGCCTT+AGG + chr8.4:19517685-19517704 MS.gene43216:CDS 50.0%
GCATGAGAAGGAGAAGGAGA+AGG - chr8.4:19519265-19519284 None:intergenic 50.0%
GGATCAGCATCAATTACCGG+GGG + chr8.4:19518333-19518352 MS.gene43216:CDS 50.0%
GTAGAAATGCGTACCGAGGA+TGG - chr8.4:19516961-19516980 None:intergenic 50.0%
TATCCTGCTATGGGGGGAAT+TGG - chr8.4:19518285-19518304 None:intergenic 50.0%
TCAGTGTCTCAACGTGGGTT+GGG + chr8.4:19515848-19515867 MS.gene43216:intron 50.0%
TCCACCTCCTTGACCTTGTA+AGG - chr8.4:19516353-19516372 None:intergenic 50.0%
TCCCCTTCCTTACAAGGTCA+AGG + chr8.4:19516343-19516362 MS.gene43216:CDS 50.0%
TCCTTACAAGGTCAAGGAGG+TGG + chr8.4:19516349-19516368 MS.gene43216:CDS 50.0%
TGAGAAGGAGAAGGAGAAGG+AGG - chr8.4:19519262-19519281 None:intergenic 50.0%
TGGGTTGCATGAGAAGGAGA+AGG - chr8.4:19519271-19519290 None:intergenic 50.0%
TGGTGTAGAAATGCGTACCG+AGG - chr8.4:19516965-19516984 None:intergenic 50.0%
TGGTTGTATCCTGCTATGGG+GGG - chr8.4:19518291-19518310 None:intergenic 50.0%
TGTCCTCCTGATCCTTCTTC+AGG - chr8.4:19516649-19516668 None:intergenic 50.0%
TTCAGTGTCTCAACGTGGGT+TGG + chr8.4:19515847-19515866 MS.gene43216:intron 50.0%
! AGCGACTTGGACGAACAACT+CGG - chr8.4:19519195-19519214 None:intergenic 50.0%
! GGTGCTGAATCACACGGTAT+AGG - chr8.4:19519082-19519101 None:intergenic 50.0%
! TTCATGATGGGAGATGGAGG+AGG + chr8.4:19517181-19517200 MS.gene43216:CDS 50.0%
! TTTGACTCGAGAAGAACGCG+CGG - chr8.4:19516600-19516619 None:intergenic 50.0%
!! CTACTGGGTGCTGAATCACA+CGG - chr8.4:19519088-19519107 None:intergenic 50.0%
AAATGCGTACCGAGGATGGC+TGG - chr8.4:19516957-19516976 None:intergenic 55.0%
AAGAGCTGGAAGGGAGCTAC+TGG - chr8.4:19519104-19519123 None:intergenic 55.0%
AATGCGTACCGAGGATGGCT+GGG - chr8.4:19516956-19516975 None:intergenic 55.0%
AGAGCTGGAAGGGAGCTACT+GGG - chr8.4:19519103-19519122 None:intergenic 55.0%
AGTAGCTCCCTTCCAGCTCT+TGG + chr8.4:19519103-19519122 MS.gene43216:CDS 55.0%
ATCTTTACGCGGGTGCGCTT+TGG + chr8.4:19518981-19519000 MS.gene43216:CDS 55.0%
CAAGGCATAAGCCATGGGGA+GGG - chr8.4:19516522-19516541 None:intergenic 55.0%
TCAAGGCATAAGCCATGGGG+AGG - chr8.4:19516523-19516542 None:intergenic 55.0%
TCTTCACACCGTCCCTGTAG+TGG - chr8.4:19518630-19518649 None:intergenic 55.0%
TCTTTACGCGGGTGCGCTTT+GGG + chr8.4:19518982-19519001 MS.gene43216:CDS 55.0%
! ATGGGAGATGGAGGAGGTAC+AGG + chr8.4:19517187-19517206 MS.gene43216:CDS 55.0%
AACGCGCGGTTTGAGCCATC+AGG - chr8.4:19516586-19516605 None:intergenic 60.0%
CACGGGAACTGATCTCGGTG+TGG - chr8.4:19516209-19516228 None:intergenic 60.0%
TACCGAGGATGGCTGGGACC+CGG - chr8.4:19516950-19516969 None:intergenic 65.0%
CACCGGGTCCCAGCCATCCT+CGG + chr8.4:19516945-19516964 MS.gene43216:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 19515317 19519363 19515317 ID=MS.gene43216
chr8.4 mRNA 19515317 19519363 19515317 ID=MS.gene43216.t1;Parent=MS.gene43216
chr8.4 exon 19515317 19515370 19515317 ID=MS.gene43216.t1.exon1;Parent=MS.gene43216.t1
chr8.4 CDS 19515317 19515370 19515317 ID=cds.MS.gene43216.t1;Parent=MS.gene43216.t1
chr8.4 exon 19516166 19516966 19516166 ID=MS.gene43216.t1.exon2;Parent=MS.gene43216.t1
chr8.4 CDS 19516166 19516966 19516166 ID=cds.MS.gene43216.t1;Parent=MS.gene43216.t1
chr8.4 exon 19517070 19517286 19517070 ID=MS.gene43216.t1.exon3;Parent=MS.gene43216.t1
chr8.4 CDS 19517070 19517286 19517070 ID=cds.MS.gene43216.t1;Parent=MS.gene43216.t1
chr8.4 exon 19517602 19517780 19517602 ID=MS.gene43216.t1.exon4;Parent=MS.gene43216.t1
chr8.4 CDS 19517602 19517780 19517602 ID=cds.MS.gene43216.t1;Parent=MS.gene43216.t1
chr8.4 exon 19518156 19518397 19518156 ID=MS.gene43216.t1.exon5;Parent=MS.gene43216.t1
chr8.4 CDS 19518156 19518397 19518156 ID=cds.MS.gene43216.t1;Parent=MS.gene43216.t1
chr8.4 exon 19518967 19519363 19518967 ID=MS.gene43216.t1.exon6;Parent=MS.gene43216.t1
chr8.4 CDS 19518967 19519363 19518967 ID=cds.MS.gene43216.t1;Parent=MS.gene43216.t1
Gene Sequence

>MS.gene43216

ATGAATGTATCTGATACTGCCTGTGCCTCACTTTTGAAATCAATACTTTGTGCGGTAGGTCTTTTTTATCCCTAAAACATATATTTATTTTAATGAGAACCTAAAGAAAAAGTATATATTCAAGGTTTTTTATATCAAAAAATAGTCATGTATTGCTTGAGACAGCATCATATTCTTTTATAGGAAAGTGTTTGTGGTTAATTTAGTTTGTGCTTTGTCTATTCTTATTTATAAGACCCTTTTAAAAGATTTGTTTATCCCTTAATATAAGACTGTACAAATTTCTAGATACTATTACTCTTTCTCCAAATACATCCCTTATTAATAACTATCAATTGGTCTTGAAATATGAAAAGTCAACTGAACACACTTATACACAAAAGGTAATTTAGTAATAGTCATAAACAAATTATACACATCAATTAGACTATCAACTTTTCTTAATATGCATAAAAAGTTCCAAAGGGTCTTATAAATAGGGACGAAGTGAGTAGCAAAGATTGGGCCCTAGACCTTTTGCGTAGTACTCCTTCAGTGTCTCAACGTGGGTTGGGACGAGATCTTGATATATTGAAACCTATACTAGTAACCGATGTTTTAAATCGCAGTTGTGATCACAGTCTTGATCCTAAACATTCCGAAGAATCACAGTCTTATGCGATTGATGCAGCCTCATTTACGGTTACAGAGACATCAAAAACCTTTATATCGTGACTTAGATTGTTGTTGCAGAGCTTTTTTTTCTTTTTTCTTTTTTTTTCTTTCAAAAACCTGCCAGTAACCACTTTTTTTCAGTTCAACAATTTACCTATGCCTTGTATGTAGCTAGCTAACTTTGTTTGTTTGTAGAGGTGTGACCCTTATTCAGGCGAGCTGTTTACGGTTCAATCCACACCGAGATCAGTTCCCGTGCTTTGCAATTCTGCCATTCCGGCAAATTCTTCTCAATCAAAGGCATCGGTGCATGACTTCTGCTCTGAAGTATGGGATACATGTCAAACTGTGTCAATAGTAAACTCACCATTTTCCCCTTCCTTACAAGGTCAAGGAGGTGGATTACCAGCTAATACCAATGCAACCAAACTGAATGAACTGTGGCAATCGAAAAACGATTTTTGTAAAGCATTTGGTGGAGCTTCCAATAATCAATCAGTATGCTTTGGGGGGGAACCTGTTGCATTACGTAACAATGAGACTATTATCCCTCCCCATGGCTTATGCCTTGAGAAAATTGGGAATGGATCTTATCTCAATATGGTTGCTCATCCTGATGGCTCAAACCGCGCGTTCTTCTCGAGTCAAATGGGGAAAGTTTGGTTGGCAACTATTCCTGAAGAAGGATCAGGAGGACAATTGGAGCTTGATGAATCAAGTCCCTTTGTTGATCTAACTGATCAAGTTTATTTTGATACTCAATTTGGAATGATGGGAATGTCGTTTCATCCAAATTTTGCAAACAACGGCCGATTCTTCGCTTCGTTTAACTGTAATAAAGATAAATGGTCTGGCTGCAATGGAATATGTTCTTGTAATTCAAATGTTAATTGTGATCCATCAAAGATAGGTACTAGTAATGGCGCTCAACCGTGTCAATATCAAACTGTTATTGCAGAATATACTGCTAATGGCACCGGGTCCCAGCCATCCTCGGTACGCATTTCTACACCATACATATGAAACAATAGTTTCTATAAGGTGTTTAATTCAGTGGATATAATAGAATAGAACTATCTAATCATTATCGGATTTTCAGGCTACAAGTGCTAAACCAACTGAGGTGAGAAGAATATTTACCATGGGACTCCCATTTACATCTCAACACGGTGGTCAGATACTCTTTGGACCTAATGATGGGTATTTATACTTCATGATGGGAGATGGAGGAGGTACAGGTGATCCATACAATTTTTCCCAAAACAAGAAATCACTGCTTGGAAAGGTTATGAGGCTTGATGTAGACAACATTCCAAGTGAGTAGTACAAACACTTCATATATATAGCACAAACAATTCAATCATTCTATTTTCTCAAACTATTACCGGTGTTGACATGTTAGTGTTAGCTTTGTGCTTGGTGTCCCTGTCTTTGTCGATGCTTCATAGCTCTATAGCTTGTGCGCTTCCTTTTATAAAATGTTCTACCAATAATTGGTCAAACAAATGCTGGCCATATAGTTGAATAGAATCTAGTTGTTCTGTTTCTACTAGCATTTAAAGTTCATTGAGTACTGATAATATTTTTTAATTCCTCACTATTGACAATTATATTTATCATGAACCTTTCAGGTGCATCAGAAGTTAGTAAACTTGGACTTTGGGGTAGCTACTCAATTCCTAAGGATAATCCATTCAGTGAAGATAAAGATCTGGAGCCTGAAATATGGGCCTTAGGATTAAGAAATCCTTGGCGATGCAGTTTTGATTCAGAAAAACCTTCCTACTTTTTTTGTGGAGATGTTGGACAGGTTTGTGAATGCTTATCTCAAAATAAATTTCAGAAATGATATTTGTACACTTGAAAAATTCTAAACCTGCAACGCTAGTTAAGGACGTTTGAAATTAGGGTTAATGAAACATGGAGTTTGGTTAATGAGTACGGCAATATTGGATTACTCATTAACCACTTACCGAGTTTCATTAACCATTACTTCGTTCATTATCAACCGAGTTCTCTGTTAAGGAAGTTCAATGGATGTATAACCGTTTAAGAGAACAAAAAGAATGCATGCGTCTTTCTTGAGGCTAAAATAGTTGTCAATTTCCTCAATCATAAACTTTTAATAACTTCTACAAGGAAAAAAGTGAAATGCAATATTCTTAGTTACACAATTGATTTGCAGGATCTTTATGAAGAGGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTATATGAGGGACTCTATCCATTCACTACTACAGAGTCACCTGGAGGAAATACATCCCTTAAATCCATAAATCCAATTCCCCCCATAGCAGGATACAACCATTCCCAAATAAACAAGAATGAAGGATCAGCATCAATTACCGGGGGATATGTTTATCGATCCATGACTGATCCTTGCATGTTTGGAAGGTACTGAAGCCTTTTCTTTTCCTTTTTGGCCTTCATCTGGTTTTTCATATTATGTAAGTTGTTGAGAGTCACAGAAAGAATAAGATGTGGTCTGAAAAAATGTTTATAAGTAGCAGACGCCCTTCACCTTACAAGCTGCATTTGTATGGATGAGTTATACCTAACCAAAATTTTTAAGATGAGTTCAGAGTCTATCTAAATTCTGTCACTCGGGTCATGCTTTACATGTCCACTACAGGGACGGTGTGAAGAAGTGAATGCAACAACAAATTGTAATTTATCCAGCACAATACTTAACTCTTGCACAAGAACAAATAGTACACATGTGTGCAACATTATGAGTTGTTTCTCATTGATTGGTGTCAAGATATTAAATTGCAGTCACAACAACGATTGTAATGTCACAACCCTCAACATTGTAGAGAATCACGACCAAATACTACAGTTGGTGTGTTTTCAGTTGTGGTCATGATTTGGTCACATATCATAGACATCAAATCGCTTGATGCTGTGGATGTTTGCTCATATTTGCCATGGGACTTATTTTAAAACGCTTTGGTGCATTTCAGGTACCTGTATGCTGATCTTTACGCGGGTGCGCTTTGGGCTGCCACCGAAGATCCTTCAAATAGTGGAAATTTCACGACTAGCAAAATCCCTTTCAGCTGTGCACACGATTCTCCTATACCGTGTGATTCAGCACCCAGTAGCTCCCTTCCAGCTCTTGGATACATCTTTTCATTTGGGCAAGACAACAACAAAGATGTTTATATTCTTGCAAGTTCTGGTGTTTACCGAGTTGTTCGTCCAAGTCGCTGCAGTTACACTTGCTCACAGGAAAAGGCATCAACAACTACTACTCCTCCTTCTCCTTCTCCTTCTCATGCAACCCATTTGAGTAGCTTCTATGGATATATGTTTCTGCAGCTTTCATCTTTATTGTTGGTTTTGATGTGTTTTATGTAG

Protein sequence

>MS.gene43216.t1

MNVSDTACASLLKSILCARCDPYSGELFTVQSTPRSVPVLCNSAIPANSSQSKASVHDFCSEVWDTCQTVSIVNSPFSPSLQGQGGGLPANTNATKLNELWQSKNDFCKAFGGASNNQSVCFGGEPVALRNNETIIPPHGLCLEKIGNGSYLNMVAHPDGSNRAFFSSQMGKVWLATIPEEGSGGQLELDESSPFVDLTDQVYFDTQFGMMGMSFHPNFANNGRFFASFNCNKDKWSGCNGICSCNSNVNCDPSKIGTSNGAQPCQYQTVIAEYTANGTGSQPSSATSAKPTEVRRIFTMGLPFTSQHGGQILFGPNDGYLYFMMGDGGGTGDPYNFSQNKKSLLGKVMRLDVDNIPSASEVSKLGLWGSYSIPKDNPFSEDKDLEPEIWALGLRNPWRCSFDSEKPSYFFCGDVGQDLYEEVDLITKGGNYGWRVYEGLYPFTTTESPGGNTSLKSINPIPPIAGYNHSQINKNEGSASITGGYVYRSMTDPCMFGRYLYADLYAGALWAATEDPSNSGNFTTSKIPFSCAHDSPIPCDSAPSSSLPALGYIFSFGQDNNKDVYILASSGVYRVVRPSRCSYTCSQEKASTTTTPPSPSPSHATHLSSFYGYMFLQLSSLLLVLMCFM