Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90407.t1 | QDC33493.1 | 94.5 | 344 | 18 | 1 | 1 | 344 | 1 | 343 | 1.40E-162 | 582.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90407.t1 | Q9MA17 | 59.1 | 381 | 96 | 7 | 4 | 344 | 11 | 371 | 1.7e-81 | 304.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90407.t1 | A0A4Y5UMP1 | 94.5 | 344 | 18 | 1 | 1 | 344 | 1 | 343 | 9.9e-163 | 582.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene90407.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene90407 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene049611 | MS.gene90407 | 0.825741 | 3.97E-54 | -1.69E-46 |
| MS.gene050720 | MS.gene90407 | 0.815377 | 9.54E-52 | -1.69E-46 |
| MS.gene050725 | MS.gene90407 | 0.806276 | 8.90E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene90407 | -0.803333 | 3.66E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene90407 | -0.802706 | 4.94E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene90407 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene90407 | 0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene90407 | 0.805504 | 1.29E-49 | -1.69E-46 |
| MS.gene051552 | MS.gene90407 | 0.806596 | 7.62E-50 | -1.69E-46 |
| MS.gene051973 | MS.gene90407 | 0.816105 | 6.57E-52 | -1.69E-46 |
| MS.gene051996 | MS.gene90407 | 0.843222 | 1.60E-58 | -1.69E-46 |
| MS.gene052015 | MS.gene90407 | 0.809907 | 1.50E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene90407 | 0.80616 | 9.41E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene90407 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene054707 | MS.gene90407 | 0.800017 | 1.76E-48 | -1.69E-46 |
| MS.gene054742 | MS.gene90407 | 0.834221 | 3.40E-56 | -1.69E-46 |
| MS.gene056330 | MS.gene90407 | 0.814227 | 1.71E-51 | -1.69E-46 |
| MS.gene056680 | MS.gene90407 | 0.821614 | 3.68E-53 | -1.69E-46 |
| MS.gene056920 | MS.gene90407 | 0.822569 | 2.21E-53 | -1.69E-46 |
| MS.gene056922 | MS.gene90407 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene056925 | MS.gene90407 | 0.8061 | 9.69E-50 | -1.69E-46 |
| MS.gene056988 | MS.gene90407 | 0.810682 | 1.02E-50 | -1.69E-46 |
| MS.gene057717 | MS.gene90407 | 0.816617 | 5.04E-52 | -1.69E-46 |
| MS.gene058418 | MS.gene90407 | 0.822238 | 2.64E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene90407 | 0.816084 | 6.63E-52 | -1.69E-46 |
| MS.gene059223 | MS.gene90407 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene05960 | MS.gene90407 | 0.804829 | 1.79E-49 | -1.69E-46 |
| MS.gene059892 | MS.gene90407 | 0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene059922 | MS.gene90407 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene060087 | MS.gene90407 | 0.836649 | 8.27E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90407.t1 | MTR_2g062730 | 98.841 | 345 | 2 | 2 | 1 | 344 | 1 | 344 | 0.0 | 715 |
| MS.gene90407.t1 | MTR_8g024480 | 74.556 | 169 | 31 | 2 | 5 | 162 | 10 | 177 | 9.62e-90 | 276 |
| MS.gene90407.t1 | MTR_5g021710 | 56.148 | 244 | 97 | 4 | 5 | 239 | 3 | 245 | 5.14e-89 | 271 |
| MS.gene90407.t1 | MTR_4g035590 | 72.067 | 179 | 45 | 4 | 10 | 186 | 8 | 183 | 1.57e-88 | 270 |
| MS.gene90407.t1 | MTR_4g101680 | 48.701 | 308 | 116 | 8 | 10 | 292 | 7 | 297 | 1.03e-83 | 258 |
| MS.gene90407.t1 | MTR_8g076110 | 47.751 | 289 | 120 | 5 | 7 | 293 | 3 | 262 | 3.08e-83 | 255 |
| MS.gene90407.t1 | MTR_4g036030 | 47.284 | 313 | 128 | 9 | 10 | 297 | 7 | 307 | 3.25e-83 | 256 |
| MS.gene90407.t1 | MTR_5g012080 | 44.062 | 320 | 119 | 8 | 10 | 297 | 7 | 298 | 2.95e-79 | 246 |
| MS.gene90407.t1 | MTR_1g096430 | 41.808 | 354 | 158 | 8 | 7 | 334 | 4 | 335 | 1.48e-75 | 236 |
| MS.gene90407.t1 | MTR_3g109340 | 50.588 | 170 | 78 | 3 | 1 | 167 | 11 | 177 | 2.08e-58 | 192 |
| MS.gene90407.t1 | MTR_6g084430 | 53.374 | 163 | 72 | 2 | 7 | 169 | 2 | 160 | 3.55e-58 | 191 |
| MS.gene90407.t1 | MTR_6g477900 | 57.051 | 156 | 61 | 4 | 8 | 160 | 4 | 156 | 4.92e-58 | 188 |
| MS.gene90407.t1 | MTR_2g064090 | 53.846 | 156 | 67 | 3 | 8 | 160 | 4 | 157 | 1.39e-57 | 190 |
| MS.gene90407.t1 | MTR_3g435150 | 56.329 | 158 | 61 | 3 | 7 | 160 | 13 | 166 | 2.39e-57 | 188 |
| MS.gene90407.t1 | MTR_3g109340 | 50.292 | 171 | 78 | 4 | 1 | 167 | 11 | 178 | 5.21e-57 | 189 |
| MS.gene90407.t1 | MTR_2g078700 | 55.346 | 159 | 63 | 3 | 10 | 163 | 23 | 178 | 9.07e-57 | 189 |
| MS.gene90407.t1 | MTR_4g081870 | 46.970 | 198 | 94 | 4 | 2 | 193 | 1 | 193 | 9.11e-57 | 186 |
| MS.gene90407.t1 | MTR_2g080010 | 41.441 | 222 | 112 | 4 | 4 | 210 | 9 | 227 | 9.20e-57 | 188 |
| MS.gene90407.t1 | MTR_1g008740 | 53.659 | 164 | 70 | 4 | 7 | 167 | 10 | 170 | 1.49e-56 | 187 |
| MS.gene90407.t1 | MTR_1g008740 | 53.659 | 164 | 70 | 4 | 7 | 167 | 24 | 184 | 1.91e-56 | 187 |
| MS.gene90407.t1 | MTR_4g108760 | 52.761 | 163 | 69 | 3 | 7 | 165 | 14 | 172 | 8.29e-56 | 186 |
| MS.gene90407.t1 | MTR_5g041940 | 48.148 | 189 | 86 | 5 | 8 | 190 | 1 | 183 | 8.89e-56 | 182 |
| MS.gene90407.t1 | MTR_3g064580 | 53.846 | 156 | 67 | 3 | 8 | 160 | 4 | 157 | 9.45e-56 | 192 |
| MS.gene90407.t1 | MTR_7g085260 | 53.750 | 160 | 64 | 3 | 8 | 160 | 15 | 171 | 2.43e-54 | 182 |
| MS.gene90407.t1 | MTR_3g088110 | 51.220 | 164 | 70 | 3 | 5 | 163 | 2 | 160 | 2.87e-54 | 180 |
| MS.gene90407.t1 | MTR_5g076850 | 52.903 | 155 | 69 | 3 | 8 | 160 | 4 | 156 | 6.22e-54 | 187 |
| MS.gene90407.t1 | MTR_7g085220 | 47.368 | 171 | 73 | 3 | 4 | 160 | 2 | 169 | 8.11e-54 | 180 |
| MS.gene90407.t1 | MTR_6g032770 | 53.125 | 160 | 67 | 3 | 8 | 162 | 16 | 172 | 1.27e-53 | 181 |
| MS.gene90407.t1 | MTR_6g012670 | 50.595 | 168 | 75 | 3 | 2 | 165 | 12 | 175 | 2.77e-53 | 178 |
| MS.gene90407.t1 | MTR_3g070030 | 53.416 | 161 | 66 | 4 | 7 | 162 | 16 | 172 | 6.52e-53 | 178 |
| MS.gene90407.t1 | MTR_2g079990 | 50.595 | 168 | 74 | 4 | 6 | 171 | 12 | 172 | 7.79e-53 | 178 |
| MS.gene90407.t1 | MTR_3g096920 | 50.932 | 161 | 69 | 3 | 6 | 161 | 3 | 158 | 4.53e-52 | 174 |
| MS.gene90407.t1 | MTR_7g005280 | 45.263 | 190 | 91 | 4 | 1 | 189 | 6 | 183 | 5.17e-52 | 173 |
| MS.gene90407.t1 | MTR_8g059170 | 50.296 | 169 | 73 | 4 | 7 | 171 | 11 | 172 | 7.36e-52 | 175 |
| MS.gene90407.t1 | MTR_5g014300 | 50.920 | 163 | 68 | 4 | 6 | 160 | 2 | 160 | 1.75e-51 | 174 |
| MS.gene90407.t1 | MTR_8g094580 | 48.837 | 172 | 75 | 4 | 2 | 167 | 1 | 165 | 9.02e-51 | 171 |
| MS.gene90407.t1 | MTR_6g011860 | 45.029 | 171 | 80 | 3 | 12 | 171 | 17 | 184 | 1.27e-50 | 173 |
| MS.gene90407.t1 | MTR_2g064470 | 50.955 | 157 | 68 | 4 | 7 | 160 | 8 | 158 | 1.51e-50 | 171 |
| MS.gene90407.t1 | MTR_4g089135 | 43.889 | 180 | 72 | 3 | 10 | 163 | 15 | 191 | 3.01e-50 | 171 |
| MS.gene90407.t1 | MTR_7g100990 | 47.126 | 174 | 82 | 3 | 7 | 173 | 8 | 178 | 3.07e-50 | 171 |
| MS.gene90407.t1 | MTR_7g011130 | 51.176 | 170 | 62 | 4 | 13 | 165 | 22 | 187 | 3.44e-50 | 171 |
| MS.gene90407.t1 | MTR_3g116070 | 59.259 | 135 | 50 | 3 | 7 | 139 | 20 | 151 | 6.80e-50 | 170 |
| MS.gene90407.t1 | MTR_1g069805 | 48.795 | 166 | 79 | 4 | 9 | 173 | 9 | 169 | 7.98e-50 | 168 |
| MS.gene90407.t1 | MTR_2157s0010 | 47.561 | 164 | 70 | 3 | 10 | 160 | 8 | 168 | 1.04e-49 | 167 |
| MS.gene90407.t1 | MTR_2g093810 | 45.550 | 191 | 92 | 4 | 9 | 190 | 13 | 200 | 3.36e-49 | 167 |
| MS.gene90407.t1 | MTR_3g096140 | 50.658 | 152 | 71 | 3 | 12 | 161 | 9 | 158 | 3.40e-49 | 166 |
| MS.gene90407.t1 | MTR_2g079990 | 43.878 | 196 | 73 | 4 | 6 | 171 | 12 | 200 | 3.98e-49 | 169 |
| MS.gene90407.t1 | MTR_7g011120 | 53.416 | 161 | 60 | 4 | 13 | 162 | 11 | 167 | 4.49e-49 | 167 |
| MS.gene90407.t1 | MTR_8g063550 | 47.647 | 170 | 81 | 4 | 12 | 175 | 8 | 175 | 5.48e-49 | 167 |
| MS.gene90407.t1 | MTR_3g096920 | 51.316 | 152 | 69 | 2 | 6 | 157 | 3 | 149 | 1.41e-48 | 166 |
| MS.gene90407.t1 | MTR_8g063550 | 47.647 | 170 | 81 | 4 | 12 | 175 | 8 | 175 | 1.60e-48 | 169 |
| MS.gene90407.t1 | MTR_4g098630 | 48.824 | 170 | 75 | 5 | 2 | 165 | 1 | 164 | 1.86e-48 | 166 |
| MS.gene90407.t1 | MTR_3g096140 | 50.658 | 152 | 71 | 3 | 12 | 161 | 9 | 158 | 2.47e-48 | 166 |
| MS.gene90407.t1 | MTR_7g097090 | 51.656 | 151 | 67 | 4 | 9 | 158 | 9 | 154 | 2.80e-48 | 164 |
| MS.gene90407.t1 | MTR_8g063550 | 47.647 | 170 | 81 | 4 | 12 | 175 | 8 | 175 | 4.08e-48 | 168 |
| MS.gene90407.t1 | MTR_5g069030 | 52.258 | 155 | 70 | 3 | 10 | 162 | 25 | 177 | 1.11e-47 | 170 |
| MS.gene90407.t1 | MTR_1g090720 | 48.315 | 178 | 78 | 4 | 9 | 174 | 41 | 216 | 1.55e-47 | 167 |
| MS.gene90407.t1 | MTR_8g467490 | 46.012 | 163 | 73 | 3 | 12 | 162 | 16 | 175 | 1.67e-47 | 165 |
| MS.gene90407.t1 | MTR_3g093040 | 47.134 | 157 | 79 | 3 | 8 | 162 | 106 | 260 | 1.11e-46 | 160 |
| MS.gene90407.t1 | MTR_5g040420 | 41.799 | 189 | 94 | 4 | 9 | 186 | 13 | 196 | 1.47e-46 | 162 |
| MS.gene90407.t1 | MTR_1g097300 | 47.682 | 151 | 75 | 3 | 12 | 160 | 21 | 169 | 6.63e-46 | 164 |
| MS.gene90407.t1 | MTR_4g134460 | 48.026 | 152 | 76 | 1 | 9 | 160 | 53 | 201 | 7.83e-46 | 162 |
| MS.gene90407.t1 | MTR_3g093050 | 49.359 | 156 | 75 | 3 | 9 | 162 | 21 | 174 | 1.60e-45 | 164 |
| MS.gene90407.t1 | MTR_3g093050 | 49.359 | 156 | 75 | 3 | 9 | 162 | 21 | 174 | 2.07e-45 | 164 |
| MS.gene90407.t1 | MTR_8g093580 | 45.882 | 170 | 84 | 4 | 12 | 175 | 8 | 175 | 1.12e-44 | 160 |
| MS.gene90407.t1 | MTR_1g090723 | 46.199 | 171 | 82 | 5 | 12 | 174 | 10 | 178 | 2.48e-44 | 161 |
| MS.gene90407.t1 | MTR_0036s0150 | 46.753 | 154 | 78 | 4 | 12 | 163 | 7 | 158 | 6.08e-44 | 159 |
| MS.gene90407.t1 | MTR_1g090723 | 45.294 | 170 | 84 | 5 | 12 | 174 | 10 | 177 | 4.03e-43 | 157 |
| MS.gene90407.t1 | MTR_2g068880 | 43.605 | 172 | 78 | 5 | 6 | 160 | 17 | 186 | 4.37e-43 | 151 |
| MS.gene90407.t1 | MTR_3g070040 | 48.750 | 160 | 65 | 4 | 14 | 165 | 12 | 162 | 4.96e-43 | 152 |
| MS.gene90407.t1 | MTR_1g090723 | 45.294 | 170 | 84 | 5 | 12 | 174 | 10 | 177 | 5.42e-43 | 157 |
| MS.gene90407.t1 | MTR_2g086880 | 50.658 | 152 | 65 | 4 | 12 | 163 | 20 | 161 | 8.34e-43 | 156 |
| MS.gene90407.t1 | MTR_2g086880 | 50.658 | 152 | 65 | 4 | 12 | 163 | 20 | 161 | 8.76e-43 | 155 |
| MS.gene90407.t1 | MTR_2g068920 | 41.989 | 181 | 86 | 5 | 10 | 173 | 20 | 198 | 1.57e-42 | 149 |
| MS.gene90407.t1 | MTR_4g075980 | 46.707 | 167 | 81 | 5 | 12 | 176 | 17 | 177 | 4.79e-42 | 148 |
| MS.gene90407.t1 | MTR_5g090970 | 40.782 | 179 | 90 | 4 | 9 | 174 | 17 | 192 | 3.02e-41 | 146 |
| MS.gene90407.t1 | MTR_8g099750 | 40.000 | 190 | 101 | 4 | 5 | 186 | 9 | 193 | 1.92e-40 | 142 |
| MS.gene90407.t1 | MTR_5g090970 | 40.223 | 179 | 90 | 4 | 9 | 174 | 17 | 191 | 1.11e-39 | 142 |
| MS.gene90407.t1 | MTR_3g096140 | 47.826 | 138 | 68 | 3 | 26 | 161 | 2 | 137 | 4.53e-39 | 141 |
| MS.gene90407.t1 | MTR_3g098810 | 42.105 | 171 | 83 | 4 | 5 | 164 | 9 | 174 | 4.70e-38 | 136 |
| MS.gene90407.t1 | MTR_2g086690 | 37.766 | 188 | 101 | 5 | 11 | 186 | 5 | 188 | 1.83e-35 | 129 |
| MS.gene90407.t1 | MTR_3g098810 | 45.985 | 137 | 66 | 3 | 6 | 139 | 10 | 141 | 3.87e-34 | 124 |
| MS.gene90407.t1 | MTR_4g052620 | 36.508 | 189 | 104 | 6 | 7 | 182 | 2 | 187 | 1.86e-33 | 124 |
| MS.gene90407.t1 | MTR_8g023840 | 48.462 | 130 | 63 | 4 | 10 | 137 | 11 | 138 | 5.19e-32 | 124 |
| MS.gene90407.t1 | MTR_8g023860 | 45.333 | 150 | 75 | 5 | 10 | 157 | 12 | 156 | 3.48e-31 | 122 |
| MS.gene90407.t1 | MTR_8g094580 | 50.926 | 108 | 45 | 2 | 66 | 167 | 6 | 111 | 6.67e-31 | 117 |
| MS.gene90407.t1 | MTR_4g094302 | 36.364 | 165 | 85 | 5 | 10 | 165 | 11 | 164 | 8.40e-31 | 115 |
| MS.gene90407.t1 | MTR_4g094302 | 41.221 | 131 | 65 | 4 | 10 | 139 | 11 | 130 | 1.35e-28 | 108 |
| MS.gene90407.t1 | MTR_8g023900 | 42.012 | 169 | 85 | 6 | 13 | 179 | 196 | 353 | 2.07e-28 | 115 |
| MS.gene90407.t1 | MTR_8g023900 | 42.949 | 156 | 78 | 7 | 10 | 160 | 12 | 161 | 1.49e-27 | 112 |
| MS.gene90407.t1 | MTR_8g023930 | 40.223 | 179 | 95 | 7 | 10 | 181 | 24 | 197 | 2.52e-28 | 115 |
| MS.gene90407.t1 | MTR_7g105170 | 36.310 | 168 | 97 | 3 | 10 | 167 | 4 | 171 | 6.93e-28 | 109 |
| MS.gene90407.t1 | MTR_7g070140 | 53.947 | 76 | 34 | 1 | 66 | 140 | 17 | 92 | 2.06e-23 | 94.4 |
| MS.gene90407.t1 | MTR_8g023880 | 37.500 | 168 | 80 | 7 | 9 | 160 | 6 | 164 | 2.01e-22 | 95.5 |
| MS.gene90407.t1 | MTR_8g093790 | 34.161 | 161 | 84 | 6 | 1 | 161 | 1 | 139 | 1.90e-21 | 90.5 |
| MS.gene90407.t1 | MTR_3g096400 | 31.928 | 166 | 89 | 6 | 8 | 159 | 5 | 160 | 1.00e-20 | 89.4 |
| MS.gene90407.t1 | MTR_7g083360 | 29.927 | 137 | 92 | 3 | 1 | 137 | 1 | 133 | 2.13e-15 | 73.2 |
| MS.gene90407.t1 | MTR_7g070150 | 58.000 | 50 | 20 | 1 | 111 | 160 | 9 | 57 | 4.07e-15 | 70.5 |
| MS.gene90407.t1 | MTR_7g083330 | 30.769 | 130 | 86 | 3 | 8 | 137 | 16 | 141 | 5.99e-13 | 67.0 |
| MS.gene90407.t1 | MTR_4g078875 | 31.737 | 167 | 88 | 7 | 10 | 158 | 48 | 206 | 6.00e-11 | 62.8 |
| MS.gene90407.t1 | MTR_7g083370 | 26.761 | 142 | 100 | 3 | 1 | 142 | 1 | 138 | 9.53e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90407.t1 | AT1G79580 | 54.005 | 387 | 110 | 12 | 2 | 344 | 9 | 371 | 5.16e-116 | 341 |
| MS.gene90407.t1 | AT1G79580 | 54.005 | 387 | 110 | 12 | 2 | 344 | 9 | 371 | 5.16e-116 | 341 |
| MS.gene90407.t1 | AT1G79580 | 54.005 | 387 | 110 | 12 | 2 | 344 | 9 | 371 | 5.16e-116 | 341 |
| MS.gene90407.t1 | AT1G79580 | 54.005 | 387 | 110 | 12 | 2 | 344 | 9 | 371 | 5.16e-116 | 341 |
| MS.gene90407.t1 | AT1G79580 | 54.005 | 387 | 110 | 12 | 2 | 344 | 9 | 371 | 5.16e-116 | 341 |
| MS.gene90407.t1 | AT4G10350 | 48.649 | 333 | 135 | 10 | 2 | 314 | 1 | 317 | 4.90e-93 | 281 |
| MS.gene90407.t1 | AT2G18060 | 48.052 | 308 | 137 | 6 | 2 | 293 | 1 | 301 | 1.71e-92 | 280 |
| MS.gene90407.t1 | AT2G18060 | 48.052 | 308 | 137 | 6 | 2 | 293 | 1 | 301 | 1.71e-92 | 280 |
| MS.gene90407.t1 | AT4G36160 | 49.191 | 309 | 121 | 8 | 9 | 293 | 13 | 309 | 3.87e-90 | 275 |
| MS.gene90407.t1 | AT4G36160 | 49.191 | 309 | 121 | 8 | 9 | 293 | 9 | 305 | 5.52e-90 | 275 |
| MS.gene90407.t1 | AT4G36160 | 49.191 | 309 | 121 | 8 | 9 | 293 | 9 | 305 | 5.52e-90 | 275 |
| MS.gene90407.t1 | AT1G32770 | 48.089 | 314 | 109 | 8 | 5 | 291 | 11 | 297 | 6.87e-86 | 263 |
| MS.gene90407.t1 | AT1G33280 | 75.817 | 153 | 35 | 2 | 10 | 162 | 8 | 158 | 1.56e-85 | 261 |
| MS.gene90407.t1 | AT2G46770 | 66.851 | 181 | 44 | 3 | 6 | 171 | 12 | 191 | 2.48e-85 | 262 |
| MS.gene90407.t1 | AT3G61910 | 68.786 | 173 | 38 | 3 | 5 | 162 | 6 | 177 | 4.34e-82 | 253 |
| MS.gene90407.t1 | AT5G66300 | 46.026 | 302 | 125 | 9 | 9 | 296 | 11 | 288 | 2.56e-80 | 247 |
| MS.gene90407.t1 | AT1G12260 | 72.368 | 152 | 41 | 1 | 10 | 161 | 7 | 157 | 8.67e-80 | 247 |
| MS.gene90407.t1 | AT1G12260 | 72.368 | 152 | 41 | 1 | 10 | 161 | 7 | 157 | 1.58e-79 | 248 |
| MS.gene90407.t1 | AT1G62700 | 73.026 | 152 | 40 | 1 | 10 | 161 | 7 | 157 | 5.02e-79 | 247 |
| MS.gene90407.t1 | AT1G62700 | 73.026 | 152 | 40 | 1 | 10 | 161 | 7 | 157 | 5.02e-79 | 247 |
| MS.gene90407.t1 | AT1G71930 | 44.595 | 296 | 125 | 7 | 9 | 292 | 8 | 276 | 3.93e-77 | 240 |
| MS.gene90407.t1 | AT1G71930 | 44.595 | 296 | 125 | 7 | 9 | 292 | 8 | 276 | 3.93e-77 | 240 |
| MS.gene90407.t1 | AT5G62380 | 65.823 | 158 | 53 | 1 | 10 | 167 | 7 | 163 | 1.70e-76 | 239 |
| MS.gene90407.t1 | AT5G62380 | 65.823 | 158 | 53 | 1 | 10 | 167 | 7 | 163 | 1.70e-76 | 239 |
| MS.gene90407.t1 | AT4G10350 | 44.643 | 280 | 119 | 10 | 55 | 314 | 7 | 270 | 6.50e-61 | 197 |
| MS.gene90407.t1 | AT2G24430 | 55.215 | 163 | 68 | 3 | 7 | 167 | 13 | 172 | 1.27e-59 | 194 |
| MS.gene90407.t1 | AT2G24430 | 55.215 | 163 | 68 | 3 | 7 | 167 | 13 | 172 | 1.27e-59 | 194 |
| MS.gene90407.t1 | AT3G17730 | 54.217 | 166 | 70 | 4 | 8 | 170 | 4 | 166 | 1.68e-58 | 189 |
| MS.gene90407.t1 | AT1G69490 | 50.000 | 170 | 75 | 3 | 2 | 165 | 1 | 166 | 9.46e-58 | 188 |
| MS.gene90407.t1 | AT5G07680 | 57.325 | 157 | 59 | 3 | 8 | 160 | 1 | 153 | 1.16e-57 | 189 |
| MS.gene90407.t1 | AT5G07680 | 56.962 | 158 | 60 | 3 | 7 | 160 | 14 | 167 | 1.23e-57 | 190 |
| MS.gene90407.t1 | AT3G18400 | 57.051 | 156 | 60 | 4 | 7 | 160 | 2 | 152 | 2.93e-57 | 188 |
| MS.gene90407.t1 | AT5G39610 | 53.333 | 165 | 69 | 3 | 1 | 161 | 11 | 171 | 1.00e-56 | 186 |
| MS.gene90407.t1 | AT1G76420 | 55.128 | 156 | 65 | 3 | 7 | 160 | 19 | 171 | 1.52e-56 | 187 |
| MS.gene90407.t1 | AT5G61430 | 55.696 | 158 | 62 | 3 | 7 | 160 | 13 | 166 | 1.52e-56 | 187 |
| MS.gene90407.t1 | AT1G65910 | 49.724 | 181 | 83 | 4 | 8 | 186 | 4 | 178 | 2.46e-56 | 194 |
| MS.gene90407.t1 | AT1G61110 | 46.154 | 182 | 81 | 2 | 4 | 171 | 10 | 188 | 4.78e-56 | 186 |
| MS.gene90407.t1 | AT5G17260 | 55.128 | 156 | 65 | 3 | 8 | 160 | 4 | 157 | 7.00e-56 | 189 |
| MS.gene90407.t1 | AT1G77450 | 48.315 | 178 | 82 | 3 | 1 | 173 | 1 | 173 | 9.81e-56 | 182 |
| MS.gene90407.t1 | AT5G18270 | 48.223 | 197 | 89 | 5 | 4 | 193 | 14 | 204 | 1.12e-55 | 185 |
| MS.gene90407.t1 | AT3G03200 | 55.769 | 156 | 64 | 3 | 8 | 160 | 4 | 157 | 2.58e-55 | 188 |
| MS.gene90407.t1 | AT5G18270 | 47.716 | 197 | 90 | 5 | 4 | 193 | 14 | 204 | 4.09e-55 | 183 |
| MS.gene90407.t1 | AT3G04060 | 53.503 | 157 | 66 | 2 | 8 | 160 | 18 | 171 | 1.66e-54 | 182 |
| MS.gene90407.t1 | AT1G54330 | 56.209 | 153 | 64 | 3 | 8 | 160 | 4 | 153 | 1.91e-54 | 181 |
| MS.gene90407.t1 | AT3G29035 | 54.037 | 161 | 66 | 3 | 2 | 158 | 16 | 172 | 3.56e-54 | 181 |
| MS.gene90407.t1 | AT3G15170 | 53.086 | 162 | 68 | 3 | 7 | 163 | 17 | 175 | 3.75e-54 | 180 |
| MS.gene90407.t1 | AT5G46590 | 54.430 | 158 | 68 | 2 | 6 | 160 | 2 | 158 | 6.95e-54 | 179 |
| MS.gene90407.t1 | AT5G63790 | 47.727 | 176 | 80 | 3 | 6 | 174 | 56 | 226 | 3.57e-53 | 178 |
| MS.gene90407.t1 | AT5G63790 | 47.727 | 176 | 80 | 3 | 6 | 174 | 46 | 216 | 4.28e-53 | 177 |
| MS.gene90407.t1 | AT3G04070 | 45.455 | 198 | 84 | 4 | 1 | 177 | 1 | 195 | 5.49e-53 | 178 |
| MS.gene90407.t1 | AT5G53950 | 53.205 | 156 | 65 | 3 | 10 | 160 | 17 | 169 | 5.50e-53 | 179 |
| MS.gene90407.t1 | AT4G27410 | 48.087 | 183 | 85 | 5 | 7 | 187 | 11 | 185 | 2.55e-52 | 175 |
| MS.gene90407.t1 | AT3G15500 | 49.686 | 159 | 74 | 3 | 7 | 163 | 11 | 165 | 3.41e-52 | 175 |
| MS.gene90407.t1 | AT5G08790 | 50.595 | 168 | 71 | 4 | 7 | 167 | 4 | 166 | 5.38e-52 | 174 |
| MS.gene90407.t1 | AT5G46590 | 57.447 | 141 | 59 | 1 | 6 | 146 | 2 | 141 | 5.73e-52 | 174 |
| MS.gene90407.t1 | AT1G52890 | 49.686 | 159 | 74 | 3 | 7 | 163 | 11 | 165 | 8.72e-52 | 174 |
| MS.gene90407.t1 | AT3G12977 | 52.229 | 157 | 68 | 3 | 7 | 160 | 15 | 167 | 1.77e-51 | 172 |
| MS.gene90407.t1 | AT3G04070 | 42.991 | 214 | 82 | 5 | 1 | 177 | 1 | 211 | 3.42e-51 | 174 |
| MS.gene90407.t1 | AT1G01720 | 46.409 | 181 | 78 | 4 | 8 | 174 | 5 | 180 | 3.44e-51 | 172 |
| MS.gene90407.t1 | AT5G04410 | 51.534 | 163 | 74 | 4 | 4 | 163 | 2 | 162 | 4.76e-51 | 178 |
| MS.gene90407.t1 | AT3G15510 | 39.713 | 209 | 100 | 5 | 14 | 202 | 21 | 223 | 2.75e-50 | 172 |
| MS.gene90407.t1 | AT3G10500 | 51.534 | 163 | 74 | 4 | 4 | 163 | 2 | 162 | 2.94e-50 | 176 |
| MS.gene90407.t1 | AT3G10490 | 49.133 | 173 | 79 | 4 | 9 | 174 | 26 | 196 | 3.33e-50 | 167 |
| MS.gene90407.t1 | AT5G24590 | 51.923 | 156 | 72 | 2 | 9 | 162 | 12 | 166 | 4.80e-50 | 173 |
| MS.gene90407.t1 | AT2G33480 | 48.466 | 163 | 77 | 2 | 2 | 164 | 7 | 162 | 5.85e-50 | 168 |
| MS.gene90407.t1 | AT3G10480 | 51.592 | 157 | 71 | 3 | 9 | 162 | 26 | 180 | 1.71e-49 | 172 |
| MS.gene90407.t1 | AT4G27410 | 45.685 | 197 | 86 | 6 | 7 | 187 | 11 | 202 | 2.62e-49 | 167 |
| MS.gene90407.t1 | AT2G33480 | 49.091 | 165 | 75 | 3 | 2 | 164 | 7 | 164 | 2.85e-49 | 166 |
| MS.gene90407.t1 | AT3G10490 | 51.592 | 157 | 71 | 3 | 9 | 162 | 26 | 180 | 7.79e-49 | 170 |
| MS.gene90407.t1 | AT5G39820 | 43.386 | 189 | 79 | 5 | 9 | 173 | 19 | 203 | 1.71e-48 | 166 |
| MS.gene90407.t1 | AT4G17980 | 51.875 | 160 | 71 | 4 | 6 | 160 | 2 | 160 | 5.00e-48 | 163 |
| MS.gene90407.t1 | AT5G13180 | 49.057 | 159 | 73 | 3 | 5 | 161 | 9 | 161 | 1.26e-47 | 161 |
| MS.gene90407.t1 | AT4G17980 | 51.875 | 160 | 71 | 4 | 6 | 160 | 2 | 160 | 1.40e-47 | 162 |
| MS.gene90407.t1 | AT2G43000 | 48.101 | 158 | 75 | 3 | 12 | 166 | 20 | 173 | 1.49e-47 | 162 |
| MS.gene90407.t1 | AT3G10480 | 51.592 | 157 | 70 | 4 | 9 | 162 | 26 | 179 | 1.54e-47 | 166 |
| MS.gene90407.t1 | AT1G26870 | 46.951 | 164 | 72 | 3 | 12 | 163 | 18 | 178 | 2.74e-47 | 165 |
| MS.gene90407.t1 | AT1G56010 | 48.750 | 160 | 72 | 4 | 7 | 160 | 16 | 171 | 6.00e-47 | 162 |
| MS.gene90407.t1 | AT3G49530 | 47.742 | 155 | 78 | 2 | 9 | 161 | 12 | 165 | 6.83e-47 | 164 |
| MS.gene90407.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 1.08e-46 | 165 |
| MS.gene90407.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 1.08e-46 | 165 |
| MS.gene90407.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 1.08e-46 | 165 |
| MS.gene90407.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 1.08e-46 | 165 |
| MS.gene90407.t1 | AT5G09330 | 40.179 | 224 | 120 | 6 | 6 | 220 | 2 | 220 | 1.08e-46 | 165 |
| MS.gene90407.t1 | AT3G49530 | 45.614 | 171 | 86 | 3 | 9 | 173 | 12 | 181 | 1.34e-46 | 164 |
| MS.gene90407.t1 | AT2G02450 | 44.199 | 181 | 88 | 2 | 10 | 190 | 51 | 218 | 2.47e-46 | 162 |
| MS.gene90407.t1 | AT2G02450 | 44.199 | 181 | 88 | 2 | 10 | 190 | 51 | 218 | 3.58e-46 | 162 |
| MS.gene90407.t1 | AT4G28530 | 48.521 | 169 | 63 | 7 | 10 | 160 | 10 | 172 | 7.32e-45 | 157 |
| MS.gene90407.t1 | AT3G10480 | 43.386 | 189 | 71 | 3 | 9 | 162 | 26 | 213 | 9.15e-45 | 160 |
| MS.gene90407.t1 | AT1G52880 | 40.090 | 222 | 107 | 6 | 14 | 217 | 21 | 234 | 9.83e-45 | 156 |
| MS.gene90407.t1 | AT5G64060 | 43.750 | 176 | 91 | 4 | 6 | 175 | 2 | 175 | 1.52e-44 | 156 |
| MS.gene90407.t1 | AT1G33060 | 47.337 | 169 | 83 | 4 | 9 | 173 | 23 | 189 | 3.22e-44 | 161 |
| MS.gene90407.t1 | AT1G33060 | 47.337 | 169 | 83 | 4 | 9 | 173 | 23 | 189 | 3.25e-44 | 161 |
| MS.gene90407.t1 | AT4G35580 | 49.359 | 156 | 75 | 3 | 9 | 162 | 8 | 161 | 6.61e-44 | 158 |
| MS.gene90407.t1 | AT1G32510 | 46.250 | 160 | 76 | 3 | 10 | 160 | 6 | 164 | 6.83e-44 | 152 |
| MS.gene90407.t1 | AT4G35580 | 49.359 | 156 | 75 | 3 | 9 | 162 | 8 | 161 | 9.85e-44 | 158 |
| MS.gene90407.t1 | AT4G35580 | 49.359 | 156 | 75 | 3 | 9 | 162 | 8 | 161 | 1.08e-43 | 158 |
| MS.gene90407.t1 | AT5G22290 | 41.899 | 179 | 97 | 3 | 9 | 187 | 20 | 191 | 1.31e-42 | 151 |
| MS.gene90407.t1 | AT1G34190 | 43.709 | 151 | 81 | 3 | 12 | 160 | 18 | 166 | 1.41e-42 | 155 |
| MS.gene90407.t1 | AT2G27300 | 40.113 | 177 | 93 | 4 | 2 | 173 | 1 | 169 | 6.83e-42 | 149 |
| MS.gene90407.t1 | AT1G34180 | 41.722 | 151 | 84 | 3 | 12 | 160 | 18 | 166 | 2.85e-41 | 150 |
| MS.gene90407.t1 | AT2G17040 | 43.636 | 165 | 85 | 4 | 12 | 174 | 8 | 166 | 4.54e-41 | 145 |
| MS.gene90407.t1 | AT1G34180 | 41.722 | 151 | 84 | 3 | 12 | 160 | 18 | 166 | 6.78e-41 | 150 |
| MS.gene90407.t1 | AT3G44290 | 44.079 | 152 | 75 | 4 | 12 | 163 | 16 | 157 | 2.37e-39 | 139 |
| MS.gene90407.t1 | AT1G34180 | 39.877 | 163 | 82 | 5 | 12 | 160 | 18 | 178 | 4.40e-39 | 144 |
| MS.gene90407.t1 | AT1G34180 | 39.877 | 163 | 82 | 5 | 12 | 160 | 18 | 178 | 7.38e-39 | 145 |
| MS.gene90407.t1 | AT5G04395 | 45.860 | 157 | 73 | 2 | 1 | 145 | 19 | 175 | 8.89e-39 | 136 |
| MS.gene90407.t1 | AT3G44290 | 44.079 | 152 | 75 | 4 | 12 | 163 | 16 | 157 | 1.50e-38 | 140 |
| MS.gene90407.t1 | AT2G18060 | 38.356 | 219 | 112 | 6 | 91 | 293 | 2 | 213 | 2.66e-38 | 138 |
| MS.gene90407.t1 | AT3G12910 | 40.331 | 181 | 84 | 5 | 12 | 173 | 23 | 198 | 5.22e-38 | 138 |
| MS.gene90407.t1 | AT5G61430 | 59.596 | 99 | 35 | 2 | 66 | 160 | 6 | 103 | 5.46e-36 | 132 |
| MS.gene90407.t1 | AT1G32870 | 41.772 | 158 | 84 | 4 | 10 | 163 | 10 | 163 | 2.13e-34 | 132 |
| MS.gene90407.t1 | AT1G32870 | 41.772 | 158 | 84 | 4 | 10 | 163 | 10 | 163 | 2.31e-34 | 132 |
| MS.gene90407.t1 | AT1G32870 | 41.772 | 158 | 84 | 4 | 10 | 163 | 46 | 199 | 3.14e-34 | 132 |
| MS.gene90407.t1 | AT3G12977 | 54.128 | 109 | 43 | 3 | 55 | 160 | 10 | 114 | 1.62e-33 | 124 |
| MS.gene90407.t1 | AT1G56010 | 55.102 | 98 | 38 | 2 | 68 | 160 | 8 | 104 | 7.90e-32 | 120 |
| MS.gene90407.t1 | AT5G22380 | 36.364 | 176 | 97 | 6 | 7 | 172 | 4 | 174 | 7.38e-29 | 112 |
| MS.gene90407.t1 | AT3G44350 | 33.333 | 189 | 111 | 6 | 7 | 187 | 4 | 185 | 9.32e-29 | 112 |
| MS.gene90407.t1 | AT2G33480 | 50.000 | 106 | 50 | 2 | 61 | 164 | 3 | 107 | 1.04e-28 | 110 |
| MS.gene90407.t1 | AT5G64530 | 35.882 | 170 | 77 | 6 | 8 | 160 | 1 | 155 | 8.57e-27 | 105 |
| MS.gene90407.t1 | AT3G44350 | 40.146 | 137 | 72 | 4 | 7 | 138 | 4 | 135 | 1.26e-26 | 103 |
| MS.gene90407.t1 | AT5G64530 | 41.481 | 135 | 63 | 5 | 8 | 141 | 1 | 120 | 2.49e-26 | 102 |
| MS.gene90407.t1 | AT1G02230 | 44.275 | 131 | 65 | 5 | 11 | 137 | 4 | 130 | 3.96e-25 | 104 |
| MS.gene90407.t1 | AT4G28530 | 42.017 | 119 | 48 | 4 | 10 | 111 | 10 | 124 | 1.22e-24 | 102 |
| MS.gene90407.t1 | AT3G04420 | 41.860 | 129 | 71 | 4 | 11 | 137 | 4 | 130 | 1.51e-23 | 99.0 |
| MS.gene90407.t1 | AT4G01520 | 37.423 | 163 | 93 | 6 | 11 | 168 | 5 | 163 | 2.27e-23 | 98.6 |
| MS.gene90407.t1 | AT3G04420 | 41.860 | 129 | 71 | 4 | 11 | 137 | 4 | 130 | 3.09e-23 | 99.0 |
| MS.gene90407.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 1.38e-22 | 97.8 |
| MS.gene90407.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 1.54e-22 | 98.2 |
| MS.gene90407.t1 | AT4G01550 | 37.086 | 151 | 88 | 4 | 13 | 160 | 7 | 153 | 1.74e-22 | 98.2 |
| MS.gene90407.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 1.88e-22 | 97.8 |
| MS.gene90407.t1 | AT4G01540 | 37.654 | 162 | 90 | 7 | 13 | 168 | 7 | 163 | 1.98e-22 | 98.2 |
| MS.gene90407.t1 | AT1G02250 | 42.424 | 132 | 66 | 5 | 11 | 137 | 4 | 130 | 1.32e-21 | 94.7 |
| MS.gene90407.t1 | AT2G43000 | 44.681 | 94 | 48 | 2 | 75 | 165 | 2 | 94 | 7.62e-21 | 89.4 |
| MS.gene90407.t1 | AT1G02220 | 41.667 | 132 | 70 | 5 | 8 | 137 | 1 | 127 | 8.82e-21 | 92.8 |
| MS.gene90407.t1 | AT3G10490 | 51.250 | 80 | 35 | 2 | 86 | 162 | 2 | 80 | 1.69e-20 | 91.3 |
| MS.gene90407.t1 | AT3G10490 | 51.250 | 80 | 35 | 2 | 86 | 162 | 2 | 80 | 1.69e-20 | 91.3 |
| MS.gene90407.t1 | AT5G50820 | 35.461 | 141 | 65 | 6 | 8 | 139 | 15 | 138 | 1.94e-18 | 82.8 |
| MS.gene90407.t1 | AT1G01010 | 35.065 | 154 | 85 | 7 | 13 | 157 | 6 | 153 | 7.06e-18 | 84.7 |
| MS.gene90407.t1 | AT5G14000 | 30.000 | 190 | 119 | 6 | 6 | 190 | 11 | 191 | 4.15e-17 | 79.3 |
| MS.gene90407.t1 | AT5G22290 | 37.864 | 103 | 59 | 2 | 92 | 194 | 2 | 99 | 3.74e-16 | 77.4 |
| MS.gene90407.t1 | AT3G56530 | 26.623 | 154 | 108 | 3 | 7 | 158 | 49 | 199 | 8.26e-15 | 74.7 |
| MS.gene90407.t1 | AT5G14000 | 29.932 | 147 | 95 | 3 | 6 | 150 | 11 | 151 | 3.59e-14 | 69.7 |
| MS.gene90407.t1 | AT3G04430 | 35.075 | 134 | 71 | 5 | 16 | 137 | 6 | 135 | 5.88e-12 | 64.3 |
Find 80 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCTCATTCCAATCCTTT+TGG | 0.284680 | 2.3:+31709103 | None:intergenic |
| TAACAGTTCCTCCAGGGTTT+AGG | 0.294791 | 2.3:-31710073 | MS.gene90407:CDS |
| GAGCAACTACAGCTGGGTTT+TGG | 0.302263 | 2.3:-31709166 | MS.gene90407:CDS |
| GGTGCAGCCTGGTGATTATT+AGG | 0.325193 | 2.3:+31708364 | None:intergenic |
| TTTGGAATTGGTGTGATATA+TGG | 0.337061 | 2.3:+31709121 | None:intergenic |
| CTTCTTCTTCAATTTCTTGT+TGG | 0.338565 | 2.3:+31708785 | None:intergenic |
| TGCATGTGATGATGATGTTT+TGG | 0.354863 | 2.3:+31708706 | None:intergenic |
| AACACCACCACCACCTTTGA+TGG | 0.356402 | 2.3:-31708655 | MS.gene90407:CDS |
| ATGGAATGGATCTTAATCTA+AGG | 0.360900 | 2.3:-31708405 | MS.gene90407:CDS |
| GGTACTGCTATAGCTGATTC+TGG | 0.362952 | 2.3:+31708604 | None:intergenic |
| CTATTTGTTCTTGTTCCTGT+TGG | 0.367370 | 2.3:+31709188 | None:intergenic |
| TGGTGGTGATTGGTCATTCT+TGG | 0.375350 | 2.3:-31708449 | MS.gene90407:CDS |
| TATTTGTTCTTGTTCCTGTT+GGG | 0.389319 | 2.3:+31709189 | None:intergenic |
| TGATGATAATGCAGAAGTTC+AGG | 0.405616 | 2.3:-31709003 | MS.gene90407:intron |
| TTTGGTTCTAGAAAATGGTT+TGG | 0.426326 | 2.3:+31708724 | None:intergenic |
| ATCTCAACAGACTTGAGCCT+TGG | 0.426871 | 2.3:-31709959 | MS.gene90407:CDS |
| GATAAGTGTAGGATTGGATC+AGG | 0.432547 | 2.3:-31709257 | MS.gene90407:CDS |
| GGATGTCCATTGATGAGTTA+TGG | 0.436712 | 2.3:+31708569 | None:intergenic |
| CTCATGGTCACAAAACTGAT+TGG | 0.440810 | 2.3:-31709052 | MS.gene90407:CDS |
| TCACAACCAAGGTAATGAAA+TGG | 0.449921 | 2.3:+31708304 | None:intergenic |
| CACACCAATTCCAAAAGGAT+TGG | 0.463232 | 2.3:-31709113 | MS.gene90407:CDS |
| GAAGTTCCAACAGCAGTAGA+AGG | 0.470021 | 2.3:+31708343 | None:intergenic |
| ACAAATAGAGCAACTACAGC+TGG | 0.470753 | 2.3:-31709173 | MS.gene90407:CDS |
| AAATTTCCATTTCATTACCT+TGG | 0.472448 | 2.3:-31708310 | MS.gene90407:CDS |
| GTTGCAGATAAGTGTAGGAT+TGG | 0.472884 | 2.3:-31709263 | MS.gene90407:intron |
| TCTCAACAGACTTGAGCCTT+GGG | 0.476536 | 2.3:-31709958 | MS.gene90407:CDS |
| TTCCTTCCATAACTCATCAA+TGG | 0.495467 | 2.3:-31708575 | MS.gene90407:CDS |
| AAGATGGATGGGTAGTATGC+AGG | 0.497034 | 2.3:-31708840 | MS.gene90407:CDS |
| TACAGAATGATGCAAGGTAG+TGG | 0.509628 | 2.3:-31710101 | None:intergenic |
| GCTGCACCTTCTACTGCTGT+TGG | 0.514057 | 2.3:-31708349 | MS.gene90407:CDS |
| TCTGATAACATCAAGATCAA+TGG | 0.515700 | 2.3:+31709989 | None:intergenic |
| GATGAGTTATGGAAGGAAGT+TGG | 0.517420 | 2.3:+31708580 | None:intergenic |
| TAAAGAAGCTCCTCATCAGT+TGG | 0.517483 | 2.3:+31710044 | None:intergenic |
| CATCATCACATGCAACAACT+AGG | 0.517757 | 2.3:-31708697 | MS.gene90407:CDS |
| GGTTGATCAGTGGTGGTGAT+TGG | 0.522276 | 2.3:-31708459 | MS.gene90407:CDS |
| GGAGAATTAACAGTTCCTCC+AGG | 0.530256 | 2.3:-31710080 | MS.gene90407:CDS |
| TATATCACACCAATTCCAAA+AGG | 0.530691 | 2.3:-31709118 | MS.gene90407:CDS |
| ACAACAACAAATACTAGCTC+AGG | 0.532614 | 2.3:-31708517 | MS.gene90407:CDS |
| AATGCTCTCAAAATTTGTTG+AGG | 0.538669 | 2.3:-31708543 | MS.gene90407:CDS |
| AAAGAAGCTCCTCATCAGTT+GGG | 0.540956 | 2.3:+31710045 | None:intergenic |
| AAAACCTTAGTCTTCTACAC+TGG | 0.541616 | 2.3:-31709083 | MS.gene90407:CDS |
| TACACTGGACGTGCTCCTCA+TGG | 0.542939 | 2.3:-31709068 | MS.gene90407:CDS |
| GACCATTTGTTGATCTCATG+TGG | 0.545405 | 2.3:+31708746 | None:intergenic |
| AAGGACAAGAAATACCCAAC+AGG | 0.548438 | 2.3:-31709203 | MS.gene90407:CDS |
| AGCAACAACAACAAGGAGAA+AGG | 0.551906 | 2.3:-31708480 | MS.gene90407:CDS |
| AGATGGATGGGTAGTATGCA+GGG | 0.553010 | 2.3:-31708839 | MS.gene90407:CDS |
| GAGAATTAACAGTTCCTCCA+GGG | 0.560980 | 2.3:-31710079 | MS.gene90407:CDS |
| CAAGTGAATTGTACCATCAA+AGG | 0.561403 | 2.3:+31708642 | None:intergenic |
| AGCTTCTTTACTATTACTTG+AGG | 0.562735 | 2.3:-31710031 | MS.gene90407:CDS |
| CAGCAGTAGAAGGTGCAGCC+TGG | 0.565773 | 2.3:+31708353 | None:intergenic |
| AACCACATGAGATCAACAAA+TGG | 0.569176 | 2.3:-31708748 | MS.gene90407:CDS |
| TGTACCATCAAAGGTGGTGG+TGG | 0.569923 | 2.3:+31708651 | None:intergenic |
| ATTCCAAAAGGATTGGAATG+AGG | 0.575697 | 2.3:-31709106 | MS.gene90407:CDS |
| ACTTGCATCACACAATGGAA+TGG | 0.578666 | 2.3:-31708419 | MS.gene90407:CDS |
| ACGTCCAGTGTAGAAGACTA+AGG | 0.581693 | 2.3:+31709079 | None:intergenic |
| TGTGTACCTTTGAGATCCCA+AGG | 0.590405 | 2.3:+31709942 | None:intergenic |
| TAGGTTCCACCCAACTGATG+AGG | 0.590857 | 2.3:-31710054 | MS.gene90407:CDS |
| CAAATAGAGCAACTACAGCT+GGG | 0.601722 | 2.3:-31709172 | MS.gene90407:CDS |
| GTCCATTGATGAGTTATGGA+AGG | 0.603236 | 2.3:+31708573 | None:intergenic |
| GATCAGGGCCACAGAATGAG+TGG | 0.613670 | 2.3:-31709241 | MS.gene90407:CDS |
| AAGAAATACCACTCATTCTG+TGG | 0.620194 | 2.3:+31709233 | None:intergenic |
| AAACTACTTGCATCACACAA+TGG | 0.620814 | 2.3:-31708424 | MS.gene90407:CDS |
| CTCATGCAGCAACAACAACA+AGG | 0.622496 | 2.3:-31708487 | MS.gene90407:CDS |
| CTTGAGCCTTGGGATCTCAA+AGG | 0.623707 | 2.3:-31709948 | MS.gene90407:intron |
| GATTCTGGACTGAACAATTG+TGG | 0.624408 | 2.3:+31708619 | None:intergenic |
| GGAGAAAGGTTGATCAGTGG+TGG | 0.631877 | 2.3:-31708466 | MS.gene90407:CDS |
| GAAGCTCCTCATCAGTTGGG+TGG | 0.635468 | 2.3:+31710048 | None:intergenic |
| TAACACTCCTAATAATCACC+AGG | 0.641336 | 2.3:-31708371 | MS.gene90407:CDS |
| CATTATCATCATCATCAAGA+CGG | 0.647901 | 2.3:+31709015 | None:intergenic |
| GAGTTATGGAAGGAAGTTGG+TGG | 0.649529 | 2.3:+31708583 | None:intergenic |
| GTGGTATTTCTTCAGTCACA+AGG | 0.650969 | 2.3:-31709222 | MS.gene90407:CDS |
| GTTGGGTGGAACCTAAACCC+TGG | 0.653580 | 2.3:+31710062 | None:intergenic |
| AATTGTACCATCAAAGGTGG+TGG | 0.659488 | 2.3:+31708648 | None:intergenic |
| GTGAATTGTACCATCAAAGG+TGG | 0.660490 | 2.3:+31708645 | None:intergenic |
| TCTGTATACAGAATGATGCA+AGG | 0.666488 | 2.3:-31710107 | None:intergenic |
| CACTTGTTGCAGATAAGTGT+AGG | 0.683334 | 2.3:-31709268 | MS.gene90407:intron |
| CAAGGAGAAAGGTTGATCAG+TGG | 0.686081 | 2.3:-31708469 | MS.gene90407:CDS |
| ATAAGTGTAGGATTGGATCA+GGG | 0.691336 | 2.3:-31709256 | MS.gene90407:CDS |
| TATCATGAGACTCACAACCA+AGG | 0.694185 | 2.3:+31708293 | None:intergenic |
| GGGTGGAACCTAAACCCTGG+AGG | 0.757480 | 2.3:+31710065 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATGTAATCTATCAAA+TGG | - | chr2.3:31709462-31709481 | MS.gene90407:intron | 15.0% |
| !! | GTTTCATACTATATATATAT+AGG | - | chr2.3:31708596-31708615 | MS.gene90407:CDS | 15.0% |
| !! | TAATATATGAACTAATACTA+TGG | - | chr2.3:31708660-31708679 | MS.gene90407:CDS | 15.0% |
| !! | AGCAATATATTTAATAAGGT+TGG | + | chr2.3:31708711-31708730 | None:intergenic | 20.0% |
| !! | GAGAAGCAATATATTTAATA+AGG | + | chr2.3:31708715-31708734 | None:intergenic | 20.0% |
| !!! | ATATCTTTTTCAAATCATTG+CGG | + | chr2.3:31708917-31708936 | None:intergenic | 20.0% |
| !!! | GTGTTTTTAGTTTGTATTAA+TGG | + | chr2.3:31708817-31708836 | None:intergenic | 20.0% |
| ! | AAATTTCCATTTCATTACCT+TGG | - | chr2.3:31710058-31710077 | MS.gene90407:CDS | 25.0% |
| ! | TATACATGCTGAAATATGAT+TGG | - | chr2.3:31708753-31708772 | MS.gene90407:CDS | 25.0% |
| !! | TATTAATGGATATGCATTGA+CGG | + | chr2.3:31708803-31708822 | None:intergenic | 25.0% |
| !!! | ATCTCATGAATTTGTTTTTC+AGG | - | chr2.3:31709505-31709524 | MS.gene90407:intron | 25.0% |
| AGAAAACTCAATATGTAGCA+GGG | + | chr2.3:31709013-31709032 | None:intergenic | 30.0% | |
| AGCTTCTTTACTATTACTTG+AGG | - | chr2.3:31708337-31708356 | MS.gene90407:CDS | 30.0% | |
| ATGGAATGGATCTTAATCTA+AGG | - | chr2.3:31709963-31709982 | MS.gene90407:CDS | 30.0% | |
| CATTATCATCATCATCAAGA+CGG | + | chr2.3:31709356-31709375 | None:intergenic | 30.0% | |
| CTTCTTCTTCAATTTCTTGT+TGG | + | chr2.3:31709586-31709605 | None:intergenic | 30.0% | |
| TAGAAAACTCAATATGTAGC+AGG | + | chr2.3:31709014-31709033 | None:intergenic | 30.0% | |
| TATATCACACCAATTCCAAA+AGG | - | chr2.3:31709250-31709269 | MS.gene90407:CDS | 30.0% | |
| TATTTGTTCTTGTTCCTGTT+GGG | + | chr2.3:31709182-31709201 | None:intergenic | 30.0% | |
| TCATGAGATGCTTAATTACT+TGG | + | chr2.3:31709494-31709513 | None:intergenic | 30.0% | |
| TCTGATAACATCAAGATCAA+TGG | + | chr2.3:31708382-31708401 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+TGG | - | chr2.3:31708941-31708960 | MS.gene90407:intron | 30.0% | |
| ! | TTTGGAATTGGTGTGATATA+TGG | + | chr2.3:31709250-31709269 | None:intergenic | 30.0% |
| !! | AATGCTCTCAAAATTTGTTG+AGG | - | chr2.3:31709825-31709844 | MS.gene90407:intron | 30.0% |
| !! | TTTGGTTCTAGAAAATGGTT+TGG | + | chr2.3:31709647-31709666 | None:intergenic | 30.0% |
| !!! | ACAAATTTTGAGAGCATTCA+AGG | + | chr2.3:31709823-31709842 | None:intergenic | 30.0% |
| !!! | GAATTTGTTTTTCAGGAAGA+TGG | - | chr2.3:31709512-31709531 | MS.gene90407:intron | 30.0% |
| !!! | GATGTTTTGGTTCTAGAAAA+TGG | + | chr2.3:31709652-31709671 | None:intergenic | 30.0% |
| AAACTACTTGCATCACACAA+TGG | - | chr2.3:31709944-31709963 | MS.gene90407:intron | 35.0% | |
| AACCACATGAGATCAACAAA+TGG | - | chr2.3:31709620-31709639 | MS.gene90407:intron | 35.0% | |
| AAGAAATACCACTCATTCTG+TGG | + | chr2.3:31709138-31709157 | None:intergenic | 35.0% | |
| ACAACAACAAATACTAGCTC+AGG | - | chr2.3:31709851-31709870 | MS.gene90407:intron | 35.0% | |
| ACCACTTAAAACTAGCTAGT+TGG | - | chr2.3:31708504-31708523 | MS.gene90407:CDS | 35.0% | |
| ATAAGTGTAGGATTGGATCA+GGG | - | chr2.3:31709112-31709131 | MS.gene90407:CDS | 35.0% | |
| ATTCCAAAAGGATTGGAATG+AGG | - | chr2.3:31709262-31709281 | MS.gene90407:intron | 35.0% | |
| CAAGTGAATTGTACCATCAA+AGG | + | chr2.3:31709729-31709748 | None:intergenic | 35.0% | |
| CTATTTGTTCTTGTTCCTGT+TGG | + | chr2.3:31709183-31709202 | None:intergenic | 35.0% | |
| CTTAAGATTGAAGACATGTC+TGG | + | chr2.3:31708987-31709006 | None:intergenic | 35.0% | |
| GCGCATAAGTAAGATATGAT+TGG | + | chr2.3:31708689-31708708 | None:intergenic | 35.0% | |
| TAACACTCCTAATAATCACC+AGG | - | chr2.3:31709997-31710016 | MS.gene90407:CDS | 35.0% | |
| TCACAACCAAGGTAATGAAA+TGG | + | chr2.3:31710067-31710086 | None:intergenic | 35.0% | |
| TTCCTTCCATAACTCATCAA+TGG | - | chr2.3:31709793-31709812 | MS.gene90407:intron | 35.0% | |
| ! | AAAACCTTAGTCTTCTACAC+TGG | - | chr2.3:31709285-31709304 | MS.gene90407:intron | 35.0% |
| ! | TGATGATAATGCAGAAGTTC+AGG | - | chr2.3:31709365-31709384 | MS.gene90407:intron | 35.0% |
| ! | TTTCCTCATTCCAATCCTTT+TGG | + | chr2.3:31709268-31709287 | None:intergenic | 35.0% |
| !! | TGCATGTGATGATGATGTTT+TGG | + | chr2.3:31709665-31709684 | None:intergenic | 35.0% |
| !!! | ACCAACTAGCTAGTTTTAAG+TGG | + | chr2.3:31708508-31708527 | None:intergenic | 35.0% |
| !!! | CACATGTGTTGGTTTTATCT+CGG | - | chr2.3:31708952-31708971 | MS.gene90407:intron | 35.0% |
| !!! | CATTCCAATCCTTTTGGAAT+TGG | + | chr2.3:31709262-31709281 | None:intergenic | 35.0% |
| !!! | TGTTTTTCAGGAAGATGGAT+GGG | - | chr2.3:31709517-31709536 | MS.gene90407:intron | 35.0% |
| !!! | TTGTTTTTCAGGAAGATGGA+TGG | - | chr2.3:31709516-31709535 | MS.gene90407:intron | 35.0% |
| AAAGAAGCTCCTCATCAGTT+GGG | + | chr2.3:31708326-31708345 | None:intergenic | 40.0% | |
| AAGGACAAGAAATACCCAAC+AGG | - | chr2.3:31709165-31709184 | MS.gene90407:CDS | 40.0% | |
| AATTGTACCATCAAAGGTGG+TGG | + | chr2.3:31709723-31709742 | None:intergenic | 40.0% | |
| ACAAATAGAGCAACTACAGC+TGG | - | chr2.3:31709195-31709214 | MS.gene90407:CDS | 40.0% | |
| ACTTGCATCACACAATGGAA+TGG | - | chr2.3:31709949-31709968 | MS.gene90407:CDS | 40.0% | |
| AGCAACAACAACAAGGAGAA+AGG | - | chr2.3:31709888-31709907 | MS.gene90407:intron | 40.0% | |
| ATTGCGGATATCAACGTATC+AGG | + | chr2.3:31708901-31708920 | None:intergenic | 40.0% | |
| CAAATAGAGCAACTACAGCT+GGG | - | chr2.3:31709196-31709215 | MS.gene90407:CDS | 40.0% | |
| CACACCAATTCCAAAAGGAT+TGG | - | chr2.3:31709255-31709274 | MS.gene90407:CDS | 40.0% | |
| CATCATCACATGCAACAACT+AGG | - | chr2.3:31709671-31709690 | MS.gene90407:intron | 40.0% | |
| CTCATGGTCACAAAACTGAT+TGG | - | chr2.3:31709316-31709335 | MS.gene90407:intron | 40.0% | |
| GAGAATTAACAGTTCCTCCA+GGG | - | chr2.3:31708289-31708308 | MS.gene90407:CDS | 40.0% | |
| GATAAGTGTAGGATTGGATC+AGG | - | chr2.3:31709111-31709130 | MS.gene90407:CDS | 40.0% | |
| GATGAGTTATGGAAGGAAGT+TGG | + | chr2.3:31709791-31709810 | None:intergenic | 40.0% | |
| GATTCTGGACTGAACAATTG+TGG | + | chr2.3:31709752-31709771 | None:intergenic | 40.0% | |
| GGATGTCCATTGATGAGTTA+TGG | + | chr2.3:31709802-31709821 | None:intergenic | 40.0% | |
| GTCCATTGATGAGTTATGGA+AGG | + | chr2.3:31709798-31709817 | None:intergenic | 40.0% | |
| GTGAATTGTACCATCAAAGG+TGG | + | chr2.3:31709726-31709745 | None:intergenic | 40.0% | |
| GTGGTATTTCTTCAGTCACA+AGG | - | chr2.3:31709146-31709165 | MS.gene90407:CDS | 40.0% | |
| GTTGCAGATAAGTGTAGGAT+TGG | - | chr2.3:31709105-31709124 | MS.gene90407:CDS | 40.0% | |
| TAAAGAAGCTCCTCATCAGT+TGG | + | chr2.3:31708327-31708346 | None:intergenic | 40.0% | |
| TATCATGAGACTCACAACCA+AGG | + | chr2.3:31710078-31710097 | None:intergenic | 40.0% | |
| TGTCAGTGCAAGTGTTTCAT+AGG | + | chr2.3:31708867-31708886 | None:intergenic | 40.0% | |
| TTGCGGATATCAACGTATCA+GGG | + | chr2.3:31708900-31708919 | None:intergenic | 40.0% | |
| ! | CACTTGTTGCAGATAAGTGT+AGG | - | chr2.3:31709100-31709119 | MS.gene90407:CDS | 40.0% |
| ! | GACCATTTGTTGATCTCATG+TGG | + | chr2.3:31709625-31709644 | None:intergenic | 40.0% |
| !! | CAATCAGTTTTGTGACCATG+AGG | + | chr2.3:31709318-31709337 | None:intergenic | 40.0% |
| !!! | TGTTGGTTTTATCTCGGTGT+CGG | - | chr2.3:31708958-31708977 | MS.gene90407:intron | 40.0% |
| AAGATGGATGGGTAGTATGC+AGG | - | chr2.3:31709528-31709547 | MS.gene90407:intron | 45.0% | |
| ACGTCCAGTGTAGAAGACTA+AGG | + | chr2.3:31709292-31709311 | None:intergenic | 45.0% | |
| AGATGGATGGGTAGTATGCA+GGG | - | chr2.3:31709529-31709548 | MS.gene90407:intron | 45.0% | |
| ATCTCAACAGACTTGAGCCT+TGG | - | chr2.3:31708409-31708428 | MS.gene90407:CDS | 45.0% | |
| CAACGTATCAGGGTCATGTT+CGG | + | chr2.3:31708890-31708909 | None:intergenic | 45.0% | |
| CTCATGCAGCAACAACAACA+AGG | - | chr2.3:31709881-31709900 | MS.gene90407:intron | 45.0% | |
| GAAGTTCCAACAGCAGTAGA+AGG | + | chr2.3:31710028-31710047 | None:intergenic | 45.0% | |
| GAGTTATGGAAGGAAGTTGG+TGG | + | chr2.3:31709788-31709807 | None:intergenic | 45.0% | |
| GGAGAATTAACAGTTCCTCC+AGG | - | chr2.3:31708288-31708307 | MS.gene90407:CDS | 45.0% | |
| TAACAGTTCCTCCAGGGTTT+AGG | - | chr2.3:31708295-31708314 | MS.gene90407:CDS | 45.0% | |
| TCTCAACAGACTTGAGCCTT+GGG | - | chr2.3:31708410-31708429 | MS.gene90407:CDS | 45.0% | |
| TGTGACATGCACTACAAGTG+TGG | + | chr2.3:31709404-31709423 | None:intergenic | 45.0% | |
| ! | CAAGGAGAAAGGTTGATCAG+TGG | - | chr2.3:31709899-31709918 | MS.gene90407:intron | 45.0% |
| ! | GGTACTGCTATAGCTGATTC+TGG | + | chr2.3:31709767-31709786 | None:intergenic | 45.0% |
| ! | TGGTGGTGATTGGTCATTCT+TGG | - | chr2.3:31709919-31709938 | MS.gene90407:intron | 45.0% |
| !! | TGTGTACCTTTGAGATCCCA+AGG | + | chr2.3:31708429-31708448 | None:intergenic | 45.0% |
| AACACCACCACCACCTTTGA+TGG | - | chr2.3:31709713-31709732 | MS.gene90407:intron | 50.0% | |
| CTTGAGCCTTGGGATCTCAA+AGG | - | chr2.3:31708420-31708439 | MS.gene90407:CDS | 50.0% | |
| GGTGCAGCCTGGTGATTATT+AGG | + | chr2.3:31710007-31710026 | None:intergenic | 50.0% | |
| TAGGTTCCACCCAACTGATG+AGG | - | chr2.3:31708314-31708333 | MS.gene90407:CDS | 50.0% | |
| ! | GAGCAACTACAGCTGGGTTT+TGG | - | chr2.3:31709202-31709221 | MS.gene90407:CDS | 50.0% |
| ! | GGAGAAAGGTTGATCAGTGG+TGG | - | chr2.3:31709902-31709921 | MS.gene90407:intron | 50.0% |
| ! | GGTTGATCAGTGGTGGTGAT+TGG | - | chr2.3:31709909-31709928 | MS.gene90407:intron | 50.0% |
| ! | TGTACCATCAAAGGTGGTGG+TGG | + | chr2.3:31709720-31709739 | None:intergenic | 50.0% |
| !!! | GCTGGGTTTTGGAAAGCAAC+AGG | - | chr2.3:31709213-31709232 | MS.gene90407:CDS | 50.0% |
| GAAGCTCCTCATCAGTTGGG+TGG | + | chr2.3:31708323-31708342 | None:intergenic | 55.0% | |
| GATCAGGGCCACAGAATGAG+TGG | - | chr2.3:31709127-31709146 | MS.gene90407:CDS | 55.0% | |
| GCTGCACCTTCTACTGCTGT+TGG | - | chr2.3:31710019-31710038 | MS.gene90407:CDS | 55.0% | |
| GTTGGGTGGAACCTAAACCC+TGG | + | chr2.3:31708309-31708328 | None:intergenic | 55.0% | |
| TACACTGGACGTGCTCCTCA+TGG | - | chr2.3:31709300-31709319 | MS.gene90407:intron | 55.0% | |
| GGGTGGAACCTAAACCCTGG+AGG | + | chr2.3:31708306-31708325 | None:intergenic | 60.0% | |
| ! | CAGCAGTAGAAGGTGCAGCC+TGG | + | chr2.3:31710018-31710037 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 31708273 | 31710117 | 31708273 | ID=MS.gene90407 |
| chr2.3 | mRNA | 31708273 | 31710117 | 31708273 | ID=MS.gene90407.t1;Parent=MS.gene90407 |
| chr2.3 | exon | 31709949 | 31710117 | 31709949 | ID=MS.gene90407.t1.exon1;Parent=MS.gene90407.t1 |
| chr2.3 | CDS | 31709949 | 31710117 | 31709949 | ID=cds.MS.gene90407.t1;Parent=MS.gene90407.t1 |
| chr2.3 | exon | 31709004 | 31709278 | 31709004 | ID=MS.gene90407.t1.exon2;Parent=MS.gene90407.t1 |
| chr2.3 | CDS | 31709004 | 31709278 | 31709004 | ID=cds.MS.gene90407.t1;Parent=MS.gene90407.t1 |
| chr2.3 | exon | 31708273 | 31708863 | 31708273 | ID=MS.gene90407.t1.exon3;Parent=MS.gene90407.t1 |
| chr2.3 | CDS | 31708273 | 31708863 | 31708273 | ID=cds.MS.gene90407.t1;Parent=MS.gene90407.t1 |
| Gene Sequence |
| Protein sequence |
