Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061045.t1 | XP_013466724.1 | 92.8 | 668 | 44 | 1 | 1 | 668 | 16 | 679 | 0.00E+00 | 1255.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061045.t1 | O80462 | 47.8 | 714 | 293 | 13 | 15 | 668 | 11 | 704 | 7.8e-171 | 602.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061045.t1 | A0A072VFF3 | 92.8 | 668 | 44 | 1 | 1 | 668 | 16 | 679 | 0.0e+00 | 1255.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05861 | MS.gene061045 | 0.808999 | 2.35E-50 | -1.69E-46 |
| MS.gene05969 | MS.gene061045 | 0.803614 | 3.20E-49 | -1.69E-46 |
| MS.gene061045 | MS.gene061682 | 0.879308 | 1.39E-69 | -1.69E-46 |
| MS.gene061045 | MS.gene063094 | 0.811112 | 8.24E-51 | -1.69E-46 |
| MS.gene061045 | MS.gene22661 | 0.808613 | 2.84E-50 | -1.69E-46 |
| MS.gene061045 | MS.gene68141 | 0.817338 | 3.47E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061045.t1 | MTR_1g034300 | 93.563 | 668 | 39 | 1 | 1 | 668 | 16 | 679 | 0.0 | 1212 |
| MS.gene061045.t1 | MTR_1g034300 | 92.964 | 668 | 42 | 2 | 1 | 668 | 16 | 678 | 0.0 | 1203 |
| MS.gene061045.t1 | MTR_8g079010 | 59.216 | 510 | 197 | 5 | 167 | 668 | 85 | 591 | 0.0 | 605 |
| MS.gene061045.t1 | MTR_5g018510 | 60.121 | 494 | 183 | 4 | 184 | 668 | 226 | 714 | 0.0 | 604 |
| MS.gene061045.t1 | MTR_5g018510 | 60.451 | 488 | 179 | 4 | 184 | 662 | 226 | 708 | 0.0 | 603 |
| MS.gene061045.t1 | MTR_6g071360 | 44.578 | 664 | 325 | 12 | 12 | 657 | 39 | 677 | 1.88e-168 | 504 |
| MS.gene061045.t1 | MTR_5g027970 | 53.422 | 453 | 204 | 5 | 198 | 645 | 171 | 621 | 4.77e-156 | 471 |
| MS.gene061045.t1 | MTR_5g027970 | 52.619 | 420 | 192 | 5 | 198 | 612 | 171 | 588 | 1.79e-141 | 426 |
| MS.gene061045.t1 | MTR_1g015750 | 33.880 | 183 | 93 | 5 | 447 | 629 | 36 | 190 | 4.12e-20 | 91.7 |
| MS.gene061045.t1 | MTR_1g015750 | 33.880 | 183 | 93 | 5 | 447 | 629 | 36 | 190 | 1.81e-19 | 91.3 |
| MS.gene061045.t1 | MTR_1g015750 | 33.880 | 183 | 93 | 5 | 447 | 629 | 44 | 198 | 2.45e-19 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061045.t1 | AT2G23460 | 47.899 | 714 | 292 | 12 | 15 | 668 | 11 | 704 | 0.0 | 609 |
| MS.gene061045.t1 | AT4G34390 | 45.495 | 677 | 326 | 16 | 2 | 668 | 24 | 667 | 4.43e-173 | 516 |
| MS.gene061045.t1 | AT1G31930 | 53.863 | 466 | 208 | 4 | 198 | 657 | 176 | 640 | 1.74e-161 | 486 |
| MS.gene061045.t1 | AT1G31930 | 53.863 | 466 | 208 | 4 | 198 | 657 | 176 | 640 | 1.74e-161 | 486 |
| MS.gene061045.t1 | AT1G31930 | 53.863 | 466 | 208 | 4 | 198 | 657 | 176 | 640 | 1.74e-161 | 486 |
| MS.gene061045.t1 | AT1G31930 | 53.863 | 466 | 208 | 4 | 198 | 657 | 176 | 640 | 1.74e-161 | 486 |
| MS.gene061045.t1 | AT1G31930 | 53.863 | 466 | 208 | 4 | 198 | 657 | 176 | 640 | 1.74e-161 | 486 |
| MS.gene061045.t1 | AT1G31930 | 53.863 | 466 | 208 | 4 | 198 | 657 | 176 | 640 | 1.74e-161 | 486 |
| MS.gene061045.t1 | AT4G34390 | 42.604 | 676 | 308 | 15 | 2 | 668 | 24 | 628 | 1.15e-155 | 470 |
| MS.gene061045.t1 | AT2G26300 | 30.601 | 183 | 99 | 5 | 447 | 629 | 35 | 189 | 7.79e-17 | 83.6 |
| MS.gene061045.t1 | AT2G26300 | 30.601 | 183 | 99 | 5 | 447 | 629 | 35 | 189 | 7.79e-17 | 83.6 |
Find 136 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACAAAGCTTCTGGATTT+TGG | 0.105208 | 1.4:+18571888 | MS.gene061045:CDS |
| ACATGATGAGATTCTAAATT+TGG | 0.156467 | 1.4:-18571167 | None:intergenic |
| ATCTTGAAAGTAGGAATTTC+TGG | 0.179069 | 1.4:-18571008 | None:intergenic |
| GGTAATCTCGCGGTCATTTA+TGG | 0.209053 | 1.4:-18572096 | None:intergenic |
| CCAGCTGCTATGCGCGAATA+TGG | 0.211059 | 1.4:+18573370 | MS.gene061045:CDS |
| TCTTGTTATAAGTGTCTTAA+AGG | 0.219647 | 1.4:+18571512 | MS.gene061045:CDS |
| CTAATTGCATGTGGCTTTAA+TGG | 0.231178 | 1.4:-18571473 | None:intergenic |
| TGTACCATGTAATTCGATTC+AGG | 0.234770 | 1.4:-18571413 | None:intergenic |
| GATCCTGGTTTAAGCTCTTT+AGG | 0.246063 | 1.4:-18571857 | None:intergenic |
| TATTGGTATGACAAAGCTTC+TGG | 0.267593 | 1.4:+18571881 | MS.gene061045:CDS |
| GTGAAGGAACTCCTAACTTT+TGG | 0.268980 | 1.4:+18572248 | MS.gene061045:CDS |
| TTACCAAGTGGTTGAATAAC+AGG | 0.274199 | 1.4:-18571086 | None:intergenic |
| GAAGAATCATGTTGATATTC+AGG | 0.278566 | 1.4:-18573882 | None:intergenic |
| GTGGAGAGATGAGGCGATTC+AGG | 0.278751 | 1.4:+18573411 | MS.gene061045:CDS |
| CCAACACATTTCCTTCCTTC+TGG | 0.281405 | 1.4:-18571620 | None:intergenic |
| CGTTCCTTTGCCCTTCTTCC+CGG | 0.284533 | 1.4:-18572291 | None:intergenic |
| CTTGTTGGTTGTGTAAATTC+TGG | 0.288160 | 1.4:+18572737 | MS.gene061045:CDS |
| TCAGGTTCAGGTTCGCGTTC+GGG | 0.306891 | 1.4:+18571287 | MS.gene061045:CDS |
| TAACAAGACCCTTTCTTTCC+TGG | 0.308070 | 1.4:-18571497 | None:intergenic |
| AGCTTAAACCAGGATCTTAT+TGG | 0.314240 | 1.4:+18571864 | MS.gene061045:CDS |
| ATCAGGTTCAGGTTCGCGTT+CGG | 0.316465 | 1.4:+18571286 | MS.gene061045:CDS |
| AGCGACCGCCAACGTTCAAC+TGG | 0.323370 | 1.4:-18572037 | None:intergenic |
| GAGAATAAAAGAAGGAATCT+TGG | 0.346360 | 1.4:+18571665 | MS.gene061045:CDS |
| GACTGAAGAGTTTCTCAGAT+TGG | 0.349631 | 1.4:+18573305 | MS.gene061045:CDS |
| CAGTCTTGGACCAATTGAAT+AGG | 0.351169 | 1.4:-18573287 | None:intergenic |
| AGATTATGAACCATCTGATA+TGG | 0.373775 | 1.4:+18573767 | MS.gene061045:CDS |
| AAGAGTATTTACTAGAGAAT+AGG | 0.381469 | 1.4:+18572996 | MS.gene061045:CDS |
| ATCAAAATACTCGTCACTTT+CGG | 0.389342 | 1.4:-18571438 | None:intergenic |
| TGTGTTGGTTGCATTGGTTA+TGG | 0.389856 | 1.4:+18571635 | MS.gene061045:CDS |
| ACTTGTGCAGCAGGGAATTC+CGG | 0.393083 | 1.4:+18573244 | MS.gene061045:intron |
| ACTTAATAGAGAAGAGCTTA+TGG | 0.402628 | 1.4:+18571811 | MS.gene061045:CDS |
| TTTGAAGTGTCTTCTGATGA+AGG | 0.403595 | 1.4:-18572706 | None:intergenic |
| TCAGGATTCACCCAAAAGTT+AGG | 0.406978 | 1.4:-18572259 | None:intergenic |
| GATACAACACCCTATTCAAT+TGG | 0.411331 | 1.4:+18573277 | MS.gene061045:CDS |
| AGATGGTTCATAATCTATCT+TGG | 0.413177 | 1.4:-18573760 | None:intergenic |
| AGCATGTACTATATTTAAAC+AGG | 0.414927 | 1.4:+18572760 | MS.gene061045:CDS |
| AGAAAATAGTTAGCACTTCT+CGG | 0.421346 | 1.4:-18573469 | None:intergenic |
| TCTTGAAAGTAGGAATTTCT+GGG | 0.421769 | 1.4:-18571007 | None:intergenic |
| GTATACCAAGGTAGGTAAAC+AGG | 0.427336 | 1.4:-18572946 | None:intergenic |
| AGTCTTGGACCAATTGAATA+GGG | 0.432909 | 1.4:-18573286 | None:intergenic |
| GGAACGATAAAGGATGCATA+TGG | 0.435003 | 1.4:+18572308 | MS.gene061045:CDS |
| GATACAATAGAATCAGGTTC+AGG | 0.442787 | 1.4:+18571275 | MS.gene061045:CDS |
| GAAGGGCAAAGGAACGATAA+AGG | 0.444858 | 1.4:+18572298 | MS.gene061045:CDS |
| CTTGTTATAAGTGTCTTAAA+GGG | 0.445597 | 1.4:+18571513 | MS.gene061045:CDS |
| CAGCTGCTATGCGCGAATAT+GGG | 0.447175 | 1.4:+18573371 | MS.gene061045:CDS |
| GCAATTAGACCAGGAAAGAA+AGG | 0.447720 | 1.4:+18571488 | MS.gene061045:CDS |
| GGCCAATGGTGGAGGATTTG+TGG | 0.449390 | 1.4:+18573392 | MS.gene061045:CDS |
| CGATTCAGGCGACATACAAC+AGG | 0.455177 | 1.4:+18573425 | MS.gene061045:CDS |
| AACTGTGTGATAAGAGCAAT+GGG | 0.459073 | 1.4:+18571590 | MS.gene061045:CDS |
| CCATATTCGCGCATAGCAGC+TGG | 0.459253 | 1.4:-18573370 | None:intergenic |
| AACTCTGATACAATAGAATC+AGG | 0.462946 | 1.4:+18571269 | MS.gene061045:CDS |
| ATAAGCTCTTCTCTATTAAG+TGG | 0.463043 | 1.4:-18571809 | None:intergenic |
| GAATGGTTTAACTGAGAAAG+AGG | 0.463198 | 1.4:+18571535 | MS.gene061045:CDS |
| TACCTACCTTGGTATACTGC+TGG | 0.469509 | 1.4:+18572952 | MS.gene061045:CDS |
| GTACCATGTAATTCGATTCA+GGG | 0.473393 | 1.4:-18571412 | None:intergenic |
| TCTGACGAGTCCTCGTCATC+TGG | 0.478574 | 1.4:+18573031 | MS.gene061045:CDS |
| AGTGTCTTCTGATGAAGGCT+TGG | 0.478728 | 1.4:-18572701 | None:intergenic |
| GATGGATTGTACCGGGAAGA+AGG | 0.482095 | 1.4:+18572280 | MS.gene061045:CDS |
| GAAGGAGCTATGGATGCAAC+AGG | 0.483614 | 1.4:-18571041 | None:intergenic |
| TATAAGTGTCTTAAAGGGAA+TGG | 0.483807 | 1.4:+18571518 | MS.gene061045:CDS |
| AGCAACCTGTTTACCTACCT+TGG | 0.486761 | 1.4:+18572941 | MS.gene061045:CDS |
| CTTTCTTCAGACTCAAACAA+AGG | 0.488868 | 1.4:+18572601 | MS.gene061045:intron |
| TCTGAGAAACTCTTCAGTCT+TGG | 0.490044 | 1.4:-18573301 | None:intergenic |
| TCTTCCCGGTACAATCCATC+AGG | 0.492229 | 1.4:-18572277 | None:intergenic |
| TTGTCATACCAATAAGATCC+TGG | 0.493441 | 1.4:-18571872 | None:intergenic |
| ATCAACATGATTCTTCTCTC+AGG | 0.498919 | 1.4:+18573889 | MS.gene061045:CDS |
| TATTGTTGATCAAGTTATGA+AGG | 0.500834 | 1.4:+18571727 | MS.gene061045:CDS |
| CTGGTTTAAGCTCTTTAGGT+GGG | 0.501442 | 1.4:-18571853 | None:intergenic |
| ATCAAGTTATGAAGGATGAA+AGG | 0.501841 | 1.4:+18571735 | MS.gene061045:CDS |
| AGGAAATGTGTTGGTTGCAT+TGG | 0.505797 | 1.4:+18571629 | MS.gene061045:CDS |
| TCTATTGTATCAGAGTTTGT+TGG | 0.508071 | 1.4:-18571263 | None:intergenic |
| CGAATATGGGCCAATGGTGG+AGG | 0.511353 | 1.4:+18573384 | MS.gene061045:CDS |
| CTCCACAAATCCTCCACCAT+TGG | 0.517066 | 1.4:-18573394 | None:intergenic |
| GAACGATAAAGGATGCATAT+GGG | 0.517582 | 1.4:+18572309 | MS.gene061045:CDS |
| ATGAGAAAGAGAAGGAGCTA+TGG | 0.518270 | 1.4:-18571051 | None:intergenic |
| GTGTGCTCTTCTGTCACTGC+CGG | 0.520414 | 1.4:+18572628 | MS.gene061045:CDS |
| ACTTGATCAATCTTGAAAGT+AGG | 0.522431 | 1.4:-18571017 | None:intergenic |
| AAAAGAGCTGTGGATACTAA+AGG | 0.522628 | 1.4:+18572121 | MS.gene061045:CDS |
| CCTGGTTTAAGCTCTTTAGG+TGG | 0.522855 | 1.4:-18571854 | None:intergenic |
| TACCTTGGTATACTGCTGGA+GGG | 0.538217 | 1.4:+18572956 | MS.gene061045:CDS |
| CGACCCTGAATCGAATTACA+TGG | 0.550701 | 1.4:+18571409 | MS.gene061045:CDS |
| GACTCCTCTCTGCTTGACTT+AGG | 0.552152 | 1.4:-18573852 | None:intergenic |
| TTTCCTGGTCTAATTGCATG+TGG | 0.553272 | 1.4:-18571482 | None:intergenic |
| TGAGCTTCAAAATATCAAGT+TGG | 0.558146 | 1.4:+18572910 | MS.gene061045:CDS |
| CTACCTTGGTATACTGCTGG+AGG | 0.561329 | 1.4:+18572955 | MS.gene061045:CDS |
| GCGACCGCCAACGTTCAACT+GGG | 0.564176 | 1.4:-18572036 | None:intergenic |
| CAATTAGACCAGGAAAGAAA+GGG | 0.566155 | 1.4:+18571489 | MS.gene061045:CDS |
| TTCCATTGTTGTGAGGCTGT+TGG | 0.567764 | 1.4:-18573820 | None:intergenic |
| TATAATATGTCCATATCAGA+TGG | 0.568576 | 1.4:-18573777 | None:intergenic |
| AAACTGTGTGATAAGAGCAA+TGG | 0.568819 | 1.4:+18571589 | MS.gene061045:CDS |
| GTACCTGTTATTCAACCACT+TGG | 0.572932 | 1.4:+18571083 | MS.gene061045:CDS |
| ATGGATTGTACCGGGAAGAA+GGG | 0.575465 | 1.4:+18572281 | MS.gene061045:CDS |
| CCACCTAAAGAGCTTAAACC+AGG | 0.581681 | 1.4:+18571854 | MS.gene061045:CDS |
| TCGCGGAATGTTACCGCAGA+CGG | 0.585486 | 1.4:-18571389 | None:intergenic |
| GACCGCCAACGTTCAACTGG+GGG | 0.587168 | 1.4:-18572034 | None:intergenic |
| TCTGGGATTGAATGATCAAG+AGG | 0.587882 | 1.4:-18570990 | None:intergenic |
| AACGATAAAGGATGCATATG+GGG | 0.594303 | 1.4:+18572310 | MS.gene061045:CDS |
| TATGGACATATTATATGCTG+AGG | 0.599670 | 1.4:+18573785 | MS.gene061045:CDS |
| TTGAAATCATGAGAAAGAGA+AGG | 0.600068 | 1.4:-18571059 | None:intergenic |
| AGGAGCATTATACAACAGCT+TGG | 0.600716 | 1.4:-18572876 | None:intergenic |
| TGAATCCTGATGGATTGTAC+CGG | 0.604818 | 1.4:+18572272 | MS.gene061045:CDS |
| TTGCAGAGAAACGCAAGCAA+TGG | 0.605462 | 1.4:+18572059 | MS.gene061045:CDS |
| TATACTGCTGGAGGGGCGCG+AGG | 0.606831 | 1.4:+18572964 | MS.gene061045:CDS |
| GAATTGATGAGAATAAAAGA+AGG | 0.607872 | 1.4:+18571657 | MS.gene061045:CDS |
| TAAAGGATGCATATGGGGCA+AGG | 0.608874 | 1.4:+18572315 | MS.gene061045:CDS |
| ATGGCAAGAGTGCCATGTGA+AGG | 0.609127 | 1.4:+18572232 | MS.gene061045:CDS |
| AAGCCACATGCAATTAGACC+AGG | 0.609283 | 1.4:+18571479 | MS.gene061045:CDS |
| ATCCAACAGCCTCACAACAA+TGG | 0.611177 | 1.4:+18573818 | MS.gene061045:CDS |
| CTCCAGCAGTATACCAAGGT+AGG | 0.613672 | 1.4:-18572954 | None:intergenic |
| TGGGATCTATGCCAGAAGGA+AGG | 0.614167 | 1.4:+18571609 | MS.gene061045:CDS |
| ATGAAAATTCCATTGTTGTG+AGG | 0.614523 | 1.4:-18573827 | None:intergenic |
| GAATCCTGATGGATTGTACC+GGG | 0.614653 | 1.4:+18572273 | MS.gene061045:CDS |
| ATGGACATATTATATGCTGA+GGG | 0.622333 | 1.4:+18573786 | MS.gene061045:CDS |
| GCGCGAATATGGGCCAATGG+TGG | 0.623909 | 1.4:+18573381 | MS.gene061045:CDS |
| ATAAACAGTAGAATCTGAAG+TGG | 0.625172 | 1.4:-18571144 | None:intergenic |
| TGTAATTCGATTCAGGGTCG+CGG | 0.626751 | 1.4:-18571406 | None:intergenic |
| GATGACGAGGACTCGTCAGA+AGG | 0.627720 | 1.4:-18573028 | None:intergenic |
| AAGTTAGGAGTTCCTTCACA+TGG | 0.628090 | 1.4:-18572244 | None:intergenic |
| TATTGAACATATCTCACAAG+AGG | 0.628942 | 1.4:-18571321 | None:intergenic |
| ACCTTGGTATACTGCTGGAG+GGG | 0.631322 | 1.4:+18572957 | MS.gene061045:CDS |
| GGAGGATTTGTGGAGAGATG+AGG | 0.636236 | 1.4:+18573402 | MS.gene061045:CDS |
| GCAATGGGATCTATGCCAGA+AGG | 0.652030 | 1.4:+18571605 | MS.gene061045:CDS |
| TATGCGCGAATATGGGCCAA+TGG | 0.657600 | 1.4:+18573378 | MS.gene061045:CDS |
| ATTGAACATATCTCACAAGA+GGG | 0.658457 | 1.4:-18571320 | None:intergenic |
| CGACCGCCAACGTTCAACTG+GGG | 0.660405 | 1.4:-18572035 | None:intergenic |
| GGGATTGAATGATCAAGAGG+AGG | 0.660953 | 1.4:-18570987 | None:intergenic |
| ATTTCCTAAGTCAAGCAGAG+AGG | 0.661953 | 1.4:+18573848 | MS.gene061045:CDS |
| GGGCTGATAATTTCACAAGG+TGG | 0.676747 | 1.4:-18572014 | None:intergenic |
| TGTACCGGGAAGAAGGGCAA+AGG | 0.677096 | 1.4:+18572287 | MS.gene061045:CDS |
| CCAGAAGGAAGGAAATGTGT+TGG | 0.680127 | 1.4:+18571620 | MS.gene061045:CDS |
| ACATGTTAAGAATCCGTCTG+CGG | 0.688376 | 1.4:+18571376 | MS.gene061045:CDS |
| AAGTTAACTTGAACAAGACG+AGG | 0.700700 | 1.4:-18571782 | None:intergenic |
| GCCCCTCCAGCAGTATACCA+AGG | 0.716032 | 1.4:-18572958 | None:intergenic |
| TTGTGATGAAGTTTACCAAG+TGG | 0.718761 | 1.4:-18571098 | None:intergenic |
| TTAACTTGAACAAGACGAGG+CGG | 0.723838 | 1.4:-18571779 | None:intergenic |
| TGGACATATTATATGCTGAG+GGG | 0.726727 | 1.4:+18573787 | MS.gene061045:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTCAAGAAAGAAAAATAAA+AGG | - | chr1.4:18572164-18572183 | None:intergenic | 20.0% |
| !!! | AAGATTGAATATTTTGTCTT+AGG | + | chr1.4:18572853-18572872 | MS.gene061045:intron | 20.0% |
| ! | ACATGATGAGATTCTAAATT+TGG | - | chr1.4:18571170-18571189 | None:intergenic | 25.0% |
| ! | AGCATGTACTATATTTAAAC+AGG | + | chr1.4:18572760-18572779 | MS.gene061045:CDS | 25.0% |
| ! | ATTAAATTCACAGTACACAA+AGG | - | chr1.4:18573160-18573179 | None:intergenic | 25.0% |
| ! | CAACTTGTATTCAAATACTA+CGG | - | chr1.4:18572415-18572434 | None:intergenic | 25.0% |
| ! | CTAAATAATCACAAAACTGA+AGG | - | chr1.4:18573202-18573221 | None:intergenic | 25.0% |
| ! | CTAAATATCTATGTGAATGT+AGG | + | chr1.4:18573725-18573744 | MS.gene061045:intron | 25.0% |
| ! | CTTCAAAAATTTCTACTTGT+TGG | + | chr1.4:18572722-18572741 | MS.gene061045:CDS | 25.0% |
| ! | GAATTGATGAGAATAAAAGA+AGG | + | chr1.4:18571657-18571676 | MS.gene061045:CDS | 25.0% |
| ! | GTTATGAGTAGTGAATAATT+AGG | - | chr1.4:18573127-18573146 | None:intergenic | 25.0% |
| ! | GTTGTAATACTTGATTATAC+AGG | + | chr1.4:18571983-18572002 | MS.gene061045:intron | 25.0% |
| ! | TAATACTTGATTATACAGGA+AGG | + | chr1.4:18571987-18572006 | MS.gene061045:intron | 25.0% |
| ! | TATAATATGTCCATATCAGA+TGG | - | chr1.4:18573780-18573799 | None:intergenic | 25.0% |
| ! | TATTGTTGATCAAGTTATGA+AGG | + | chr1.4:18571727-18571746 | MS.gene061045:CDS | 25.0% |
| ! | TCTAAGCTTGATTTATACAA+AGG | + | chr1.4:18572447-18572466 | MS.gene061045:intron | 25.0% |
| ! | TCTTTAATAACCCAAAATGA+AGG | - | chr1.4:18572837-18572856 | None:intergenic | 25.0% |
| ! | TGTACTATATTTAAACAGGT+TGG | + | chr1.4:18572764-18572783 | MS.gene061045:intron | 25.0% |
| ! | TTAATCCTCTAGTTGAATAA+AGG | + | chr1.4:18571937-18571956 | MS.gene061045:intron | 25.0% |
| !! | CTTGTTATAAGTGTCTTAAA+GGG | + | chr1.4:18571513-18571532 | MS.gene061045:CDS | 25.0% |
| !! | TATCTGTTTTCTTTTGAACT+GGG | + | chr1.4:18572558-18572577 | MS.gene061045:intron | 25.0% |
| !! | TCTTGTTATAAGTGTCTTAA+AGG | + | chr1.4:18571512-18571531 | MS.gene061045:CDS | 25.0% |
| !! | TTAAGAGTCATAGATTTTGA+AGG | - | chr1.4:18572656-18572675 | None:intergenic | 25.0% |
| !! | TTACTTAAATGCATTTTGTC+AGG | + | chr1.4:18573328-18573347 | MS.gene061045:CDS | 25.0% |
| !!! | AAGAGTATTTACTAGAGAAT+AGG | + | chr1.4:18572996-18573015 | MS.gene061045:CDS | 25.0% |
| !!! | AATAATTAGGCAGAAGTATT+AGG | - | chr1.4:18573114-18573133 | None:intergenic | 25.0% |
| !!! | ATAATTAGGCAGAAGTATTA+GGG | - | chr1.4:18573113-18573132 | None:intergenic | 25.0% |
| !!! | ATGCATGTTTACTTTTTGTT+TGG | + | chr1.4:18572353-18572372 | MS.gene061045:intron | 25.0% |
| !!! | CAATGTTACATTAGCTTTAT+TGG | - | chr1.4:18572201-18572220 | None:intergenic | 25.0% |
| !!! | TATATTTAAACAGGTTGGTT+TGG | + | chr1.4:18572769-18572788 | MS.gene061045:intron | 25.0% |
| AACTCTGATACAATAGAATC+AGG | + | chr1.4:18571269-18571288 | MS.gene061045:CDS | 30.0% | |
| ACTTAATAGAGAAGAGCTTA+TGG | + | chr1.4:18571811-18571830 | MS.gene061045:CDS | 30.0% | |
| ACTTGATCAATCTTGAAAGT+AGG | - | chr1.4:18571020-18571039 | None:intergenic | 30.0% | |
| AGAAAATAGTTAGCACTTCT+CGG | - | chr1.4:18573472-18573491 | None:intergenic | 30.0% | |
| AGATGGTTCATAATCTATCT+TGG | - | chr1.4:18573763-18573782 | None:intergenic | 30.0% | |
| AGATTATGAACCATCTGATA+TGG | + | chr1.4:18573767-18573786 | MS.gene061045:CDS | 30.0% | |
| ATAAACAGTAGAATCTGAAG+TGG | - | chr1.4:18571147-18571166 | None:intergenic | 30.0% | |
| ATAAGCTCTTCTCTATTAAG+TGG | - | chr1.4:18571812-18571831 | None:intergenic | 30.0% | |
| ATCAAGTTATGAAGGATGAA+AGG | + | chr1.4:18571735-18571754 | MS.gene061045:CDS | 30.0% | |
| ATCTTGAAAGTAGGAATTTC+TGG | - | chr1.4:18571011-18571030 | None:intergenic | 30.0% | |
| ATGAAAATTCCATTGTTGTG+AGG | - | chr1.4:18573830-18573849 | None:intergenic | 30.0% | |
| ATGGACATATTATATGCTGA+GGG | + | chr1.4:18573786-18573805 | MS.gene061045:CDS | 30.0% | |
| ATTGAACATATCTCACAAGA+GGG | - | chr1.4:18571323-18571342 | None:intergenic | 30.0% | |
| GAAGAATCATGTTGATATTC+AGG | - | chr1.4:18573885-18573904 | None:intergenic | 30.0% | |
| GAGAATAAAAGAAGGAATCT+TGG | + | chr1.4:18571665-18571684 | MS.gene061045:CDS | 30.0% | |
| GTATTATTCTGTCATGAATG+TGG | + | chr1.4:18573674-18573693 | MS.gene061045:intron | 30.0% | |
| TATAAGTGTCTTAAAGGGAA+TGG | + | chr1.4:18571518-18571537 | MS.gene061045:CDS | 30.0% | |
| TATGGACATATTATATGCTG+AGG | + | chr1.4:18573785-18573804 | MS.gene061045:CDS | 30.0% | |
| TATTGAACATATCTCACAAG+AGG | - | chr1.4:18571324-18571343 | None:intergenic | 30.0% | |
| TCAAGTATTACAACAGCATT+AGG | - | chr1.4:18571977-18571996 | None:intergenic | 30.0% | |
| TCTATTGTATCAGAGTTTGT+TGG | - | chr1.4:18571266-18571285 | None:intergenic | 30.0% | |
| TCTTGAAAGTAGGAATTTCT+GGG | - | chr1.4:18571010-18571029 | None:intergenic | 30.0% | |
| TGAGCTTCAAAATATCAAGT+TGG | + | chr1.4:18572910-18572929 | MS.gene061045:CDS | 30.0% | |
| TTAAGCCTTTATTCAACTAG+AGG | - | chr1.4:18571945-18571964 | None:intergenic | 30.0% | |
| TTGAAATCATGAGAAAGAGA+AGG | - | chr1.4:18571062-18571081 | None:intergenic | 30.0% | |
| TTGATATTCTTGAGCCAAAA+GGG | - | chr1.4:18573533-18573552 | None:intergenic | 30.0% | |
| TTTGATATTCTTGAGCCAAA+AGG | - | chr1.4:18573534-18573553 | None:intergenic | 30.0% | |
| ! | AATGAAGGAGCATATATGAA+TGG | - | chr1.4:18572822-18572841 | None:intergenic | 30.0% |
| ! | ATCAAAATACTCGTCACTTT+CGG | - | chr1.4:18571441-18571460 | None:intergenic | 30.0% |
| ! | ATCTGTTTTCTTTTGAACTG+GGG | + | chr1.4:18572559-18572578 | MS.gene061045:intron | 30.0% |
| ! | CATATATGCTCCTTCATTTT+GGG | + | chr1.4:18572824-18572843 | MS.gene061045:intron | 30.0% |
| ! | GTATCTGTTTTCTTTTGAAC+TGG | + | chr1.4:18572557-18572576 | MS.gene061045:intron | 30.0% |
| ! | TCATATATGCTCCTTCATTT+TGG | + | chr1.4:18572823-18572842 | MS.gene061045:intron | 30.0% |
| ! | TGCTAACTATTTTCTAGACA+GGG | + | chr1.4:18573477-18573496 | MS.gene061045:CDS | 30.0% |
| !!! | TCTTTTGCTGTTGTATACAA+TGG | + | chr1.4:18570963-18570982 | MS.gene061045:CDS | 30.0% |
| AAAAGAGCTGTGGATACTAA+AGG | + | chr1.4:18572121-18572140 | MS.gene061045:CDS | 35.0% | |
| AAACTGTGTGATAAGAGCAA+TGG | + | chr1.4:18571589-18571608 | MS.gene061045:CDS | 35.0% | |
| AACGATAAAGGATGCATATG+GGG | + | chr1.4:18572310-18572329 | MS.gene061045:CDS | 35.0% | |
| AACTGTGTGATAAGAGCAAT+GGG | + | chr1.4:18571590-18571609 | MS.gene061045:CDS | 35.0% | |
| AGATTACCAAAAAAGAGCTG+TGG | + | chr1.4:18572111-18572130 | MS.gene061045:CDS | 35.0% | |
| AGCTTAAACCAGGATCTTAT+TGG | + | chr1.4:18571864-18571883 | MS.gene061045:CDS | 35.0% | |
| AGTCTTGGACCAATTGAATA+GGG | - | chr1.4:18573289-18573308 | None:intergenic | 35.0% | |
| ATCAACATGATTCTTCTCTC+AGG | + | chr1.4:18573889-18573908 | MS.gene061045:CDS | 35.0% | |
| CAATTAGACCAGGAAAGAAA+GGG | + | chr1.4:18571489-18571508 | MS.gene061045:CDS | 35.0% | |
| CTTTCTTCAGACTCAAACAA+AGG | + | chr1.4:18572601-18572620 | MS.gene061045:intron | 35.0% | |
| GAACGATAAAGGATGCATAT+GGG | + | chr1.4:18572309-18572328 | MS.gene061045:CDS | 35.0% | |
| GAAGACACGATATTTCATCA+CGG | - | chr1.4:18572521-18572540 | None:intergenic | 35.0% | |
| GAATGGTTTAACTGAGAAAG+AGG | + | chr1.4:18571535-18571554 | MS.gene061045:CDS | 35.0% | |
| GATACAACACCCTATTCAAT+TGG | + | chr1.4:18573277-18573296 | MS.gene061045:CDS | 35.0% | |
| GATACAATAGAATCAGGTTC+AGG | + | chr1.4:18571275-18571294 | MS.gene061045:CDS | 35.0% | |
| GTACCATGTAATTCGATTCA+GGG | - | chr1.4:18571415-18571434 | None:intergenic | 35.0% | |
| TAACATTGCTTGTTTGCAGA+TGG | + | chr1.4:18572213-18572232 | MS.gene061045:intron | 35.0% | |
| TATTGGTATGACAAAGCTTC+TGG | + | chr1.4:18571881-18571900 | MS.gene061045:CDS | 35.0% | |
| TGGACATATTATATGCTGAG+GGG | + | chr1.4:18573787-18573806 | MS.gene061045:CDS | 35.0% | |
| TGTACCATGTAATTCGATTC+AGG | - | chr1.4:18571416-18571435 | None:intergenic | 35.0% | |
| TTACCAAGTGGTTGAATAAC+AGG | - | chr1.4:18571089-18571108 | None:intergenic | 35.0% | |
| TTGTCATACCAATAAGATCC+TGG | - | chr1.4:18571875-18571894 | None:intergenic | 35.0% | |
| TTGTGATGAAGTTTACCAAG+TGG | - | chr1.4:18571101-18571120 | None:intergenic | 35.0% | |
| ! | AAGTTAACTTGAACAAGACG+AGG | - | chr1.4:18571785-18571804 | None:intergenic | 35.0% |
| ! | ATGACAAAGCTTCTGGATTT+TGG | + | chr1.4:18571888-18571907 | MS.gene061045:CDS | 35.0% |
| ! | ATGCATTTTGTCAGGTAACA+TGG | + | chr1.4:18573336-18573355 | MS.gene061045:CDS | 35.0% |
| ! | CTTGTTGGTTGTGTAAATTC+TGG | + | chr1.4:18572737-18572756 | MS.gene061045:CDS | 35.0% |
| ! | GTGCTAACTATTTTCTAGAC+AGG | + | chr1.4:18573476-18573495 | MS.gene061045:CDS | 35.0% |
| ! | TCAGATCATTGATACCCTTT+TGG | + | chr1.4:18573516-18573535 | MS.gene061045:intron | 35.0% |
| ! | TCTGTTTTCTTTTGAACTGG+GGG | + | chr1.4:18572560-18572579 | MS.gene061045:intron | 35.0% |
| ! | TGAAGCTCATTTTCAGAGAA+AGG | - | chr1.4:18572899-18572918 | None:intergenic | 35.0% |
| ! | TGAAGGAACTCCTAACTTTT+GGG | + | chr1.4:18572249-18572268 | MS.gene061045:CDS | 35.0% |
| ! | TGACAAAGCTTCTGGATTTT+GGG | + | chr1.4:18571889-18571908 | MS.gene061045:CDS | 35.0% |
| ! | TGTTGTATCAACGTTTTCAC+CGG | - | chr1.4:18573266-18573285 | None:intergenic | 35.0% |
| ! | TTTGAAGTGTCTTCTGATGA+AGG | - | chr1.4:18572709-18572728 | None:intergenic | 35.0% |
| !! | CTAATTGCATGTGGCTTTAA+TGG | - | chr1.4:18571476-18571495 | None:intergenic | 35.0% |
| !! | GTCATAGATTTTGAAGGAAC+CGG | - | chr1.4:18572650-18572669 | None:intergenic | 35.0% |
| !!! | AGTGACGAGTATTTTGATAG+TGG | + | chr1.4:18571443-18571462 | MS.gene061045:CDS | 35.0% |
| !!! | TAGTATCCACAGCTCTTTTT+TGG | - | chr1.4:18572120-18572139 | None:intergenic | 35.0% |
| AAAAAGCTTACCAGATGACG+AGG | - | chr1.4:18573044-18573063 | None:intergenic | 40.0% | |
| AAGCACTTGTGAGATTGCTT+AGG | - | chr1.4:18573068-18573087 | None:intergenic | 40.0% | |
| AAGTTAGGAGTTCCTTCACA+TGG | - | chr1.4:18572247-18572266 | None:intergenic | 40.0% | |
| ACATGTTAAGAATCCGTCTG+CGG | + | chr1.4:18571376-18571395 | MS.gene061045:CDS | 40.0% | |
| ATGAGAAAGAGAAGGAGCTA+TGG | - | chr1.4:18571054-18571073 | None:intergenic | 40.0% | |
| ATTTCCTAAGTCAAGCAGAG+AGG | + | chr1.4:18573848-18573867 | MS.gene061045:CDS | 40.0% | |
| CAAGTTTACTGTGTCAACAG+TGG | + | chr1.4:18573622-18573641 | MS.gene061045:intron | 40.0% | |
| CAGTCTTGGACCAATTGAAT+AGG | - | chr1.4:18573290-18573309 | None:intergenic | 40.0% | |
| CTGGTTTAAGCTCTTTAGGT+GGG | - | chr1.4:18571856-18571875 | None:intergenic | 40.0% | |
| GACTGAAGAGTTTCTCAGAT+TGG | + | chr1.4:18573305-18573324 | MS.gene061045:CDS | 40.0% | |
| GATCCTGGTTTAAGCTCTTT+AGG | - | chr1.4:18571860-18571879 | None:intergenic | 40.0% | |
| GCAATTAGACCAGGAAAGAA+AGG | + | chr1.4:18571488-18571507 | MS.gene061045:CDS | 40.0% | |
| GGAACGATAAAGGATGCATA+TGG | + | chr1.4:18572308-18572327 | MS.gene061045:CDS | 40.0% | |
| GTACCTGTTATTCAACCACT+TGG | + | chr1.4:18571083-18571102 | MS.gene061045:CDS | 40.0% | |
| GTATACCAAGGTAGGTAAAC+AGG | - | chr1.4:18572949-18572968 | None:intergenic | 40.0% | |
| GTGGCAGGTGTATAAAATCA+AGG | + | chr1.4:18573693-18573712 | MS.gene061045:intron | 40.0% | |
| TAACAAGACCCTTTCTTTCC+TGG | - | chr1.4:18571500-18571519 | None:intergenic | 40.0% | |
| TATTCTGTCATGAATGTGGC+AGG | + | chr1.4:18573678-18573697 | MS.gene061045:intron | 40.0% | |
| TCAGGATTCACCCAAAAGTT+AGG | - | chr1.4:18572262-18572281 | None:intergenic | 40.0% | |
| TCTGAGAAACTCTTCAGTCT+TGG | - | chr1.4:18573304-18573323 | None:intergenic | 40.0% | |
| TTTCCTGGTCTAATTGCATG+TGG | - | chr1.4:18571485-18571504 | None:intergenic | 40.0% | |
| ! | ATTGTATGACTTGTGCAGCA+GGG | + | chr1.4:18573236-18573255 | MS.gene061045:intron | 40.0% |
| ! | GACAAAGCTTCTGGATTTTG+GGG | + | chr1.4:18571890-18571909 | MS.gene061045:CDS | 40.0% |
| ! | GTGAAGGAACTCCTAACTTT+TGG | + | chr1.4:18572248-18572267 | MS.gene061045:CDS | 40.0% |
| ! | TATTGTATGACTTGTGCAGC+AGG | + | chr1.4:18573235-18573254 | MS.gene061045:intron | 40.0% |
| ! | TCTGGGATTGAATGATCAAG+AGG | - | chr1.4:18570993-18571012 | None:intergenic | 40.0% |
| ! | TTAACTTGAACAAGACGAGG+CGG | - | chr1.4:18571782-18571801 | None:intergenic | 40.0% |
| !! | AACTTTTGGGTGAATCCTGA+TGG | + | chr1.4:18572262-18572281 | MS.gene061045:CDS | 40.0% |
| !! | AGGAAATGTGTTGGTTGCAT+TGG | + | chr1.4:18571629-18571648 | MS.gene061045:CDS | 40.0% |
| !! | AGGAGCATTATACAACAGCT+TGG | - | chr1.4:18572879-18572898 | None:intergenic | 40.0% |
| !! | TGAATCCTGATGGATTGTAC+CGG | + | chr1.4:18572272-18572291 | MS.gene061045:CDS | 40.0% |
| !! | TGTGTTGGTTGCATTGGTTA+TGG | + | chr1.4:18571635-18571654 | MS.gene061045:CDS | 40.0% |
| !!! | GCTCTTTTTTGGTAATCTCG+CGG | - | chr1.4:18572109-18572128 | None:intergenic | 40.0% |
| AAGCCACATGCAATTAGACC+AGG | + | chr1.4:18571479-18571498 | MS.gene061045:CDS | 45.0% | |
| AGCAACCTGTTTACCTACCT+TGG | + | chr1.4:18572941-18572960 | MS.gene061045:CDS | 45.0% | |
| AGTGTCTTCTGATGAAGGCT+TGG | - | chr1.4:18572704-18572723 | None:intergenic | 45.0% | |
| ATCCAACAGCCTCACAACAA+TGG | + | chr1.4:18573818-18573837 | MS.gene061045:CDS | 45.0% | |
| CCAACACATTTCCTTCCTTC+TGG | - | chr1.4:18571623-18571642 | None:intergenic | 45.0% | |
| CCACCTAAAGAGCTTAAACC+AGG | + | chr1.4:18571854-18571873 | MS.gene061045:CDS | 45.0% | |
| CCAGAAGGAAGGAAATGTGT+TGG | + | chr1.4:18571620-18571639 | MS.gene061045:CDS | 45.0% | |
| CCTGGTTTAAGCTCTTTAGG+TGG | - | chr1.4:18571857-18571876 | None:intergenic | 45.0% | |
| CGACCCTGAATCGAATTACA+TGG | + | chr1.4:18571409-18571428 | MS.gene061045:CDS | 45.0% | |
| CGATATTTCATCACGGCGTT+TGG | - | chr1.4:18572514-18572533 | None:intergenic | 45.0% | |
| GAAGGGCAAAGGAACGATAA+AGG | + | chr1.4:18572298-18572317 | MS.gene061045:CDS | 45.0% | |
| GGAGCATATATGAATGGACG+AGG | - | chr1.4:18572816-18572835 | None:intergenic | 45.0% | |
| GGGATTGAATGATCAAGAGG+AGG | - | chr1.4:18570990-18571009 | None:intergenic | 45.0% | |
| GGGCTGATAATTTCACAAGG+TGG | - | chr1.4:18572017-18572036 | None:intergenic | 45.0% | |
| GGTAATCTCGCGGTCATTTA+TGG | - | chr1.4:18572099-18572118 | None:intergenic | 45.0% | |
| TAAAGGATGCATATGGGGCA+AGG | + | chr1.4:18572315-18572334 | MS.gene061045:CDS | 45.0% | |
| TACCTACCTTGGTATACTGC+TGG | + | chr1.4:18572952-18572971 | MS.gene061045:CDS | 45.0% | |
| TACCTTGGTATACTGCTGGA+GGG | + | chr1.4:18572956-18572975 | MS.gene061045:CDS | 45.0% | |
| TGGGGGCTGATAATTTCACA+AGG | - | chr1.4:18572020-18572039 | None:intergenic | 45.0% | |
| TGTAATTCGATTCAGGGTCG+CGG | - | chr1.4:18571409-18571428 | None:intergenic | 45.0% | |
| TTCCATTGTTGTGAGGCTGT+TGG | - | chr1.4:18573823-18573842 | None:intergenic | 45.0% | |
| TTGCAGAGAAACGCAAGCAA+TGG | + | chr1.4:18572059-18572078 | MS.gene061045:CDS | 45.0% | |
| ! | ATGGATTGTACCGGGAAGAA+GGG | + | chr1.4:18572281-18572300 | MS.gene061045:CDS | 45.0% |
| !! | AGCTTCTGGATTTTGGGGAA+AGG | + | chr1.4:18571895-18571914 | MS.gene061045:CDS | 45.0% |
| !! | GAATCCTGATGGATTGTACC+GGG | + | chr1.4:18572273-18572292 | MS.gene061045:CDS | 45.0% |
| ACCTTGGTATACTGCTGGAG+GGG | + | chr1.4:18572957-18572976 | MS.gene061045:CDS | 50.0% | |
| ACTTGTGCAGCAGGGAATTC+CGG | + | chr1.4:18573244-18573263 | MS.gene061045:intron | 50.0% | |
| CAGCTGCTATGCGCGAATAT+GGG | + | chr1.4:18573371-18573390 | MS.gene061045:CDS | 50.0% | |
| CGATTCAGGCGACATACAAC+AGG | + | chr1.4:18573425-18573444 | MS.gene061045:CDS | 50.0% | |
| CTACCTTGGTATACTGCTGG+AGG | + | chr1.4:18572955-18572974 | MS.gene061045:CDS | 50.0% | |
| CTCCACAAATCCTCCACCAT+TGG | - | chr1.4:18573397-18573416 | None:intergenic | 50.0% | |
| CTCCAGCAGTATACCAAGGT+AGG | - | chr1.4:18572957-18572976 | None:intergenic | 50.0% | |
| GAAGGAGCTATGGATGCAAC+AGG | - | chr1.4:18571044-18571063 | None:intergenic | 50.0% | |
| GACTCCTCTCTGCTTGACTT+AGG | - | chr1.4:18573855-18573874 | None:intergenic | 50.0% | |
| GCAATGGGATCTATGCCAGA+AGG | + | chr1.4:18571605-18571624 | MS.gene061045:CDS | 50.0% | |
| GGAGGATTTGTGGAGAGATG+AGG | + | chr1.4:18573402-18573421 | MS.gene061045:CDS | 50.0% | |
| GTAGGAGACGTGGGCATTAT+TGG | + | chr1.4:18572488-18572507 | MS.gene061045:intron | 50.0% | |
| TATGCGCGAATATGGGCCAA+TGG | + | chr1.4:18573378-18573397 | MS.gene061045:CDS | 50.0% | |
| TCTTCCCGGTACAATCCATC+AGG | - | chr1.4:18572280-18572299 | None:intergenic | 50.0% | |
| TGGGATCTATGCCAGAAGGA+AGG | + | chr1.4:18571609-18571628 | MS.gene061045:CDS | 50.0% | |
| ! | ATCAGGTTCAGGTTCGCGTT+CGG | + | chr1.4:18571286-18571305 | MS.gene061045:CDS | 50.0% |
| !! | ATGGCAAGAGTGCCATGTGA+AGG | + | chr1.4:18572232-18572251 | MS.gene061045:CDS | 50.0% |
| !! | GATGGATTGTACCGGGAAGA+AGG | + | chr1.4:18572280-18572299 | MS.gene061045:CDS | 50.0% |
| ATCAGCCCCCAGTTGAACGT+TGG | + | chr1.4:18572029-18572048 | MS.gene061045:CDS | 55.0% | |
| CCACGTCTCCTACTACAGAG+CGG | - | chr1.4:18572481-18572500 | None:intergenic | 55.0% | |
| CCAGCTGCTATGCGCGAATA+TGG | + | chr1.4:18573370-18573389 | MS.gene061045:CDS | 55.0% | |
| CCATATTCGCGCATAGCAGC+TGG | - | chr1.4:18573373-18573392 | None:intergenic | 55.0% | |
| CGAATATGGGCCAATGGTGG+AGG | + | chr1.4:18573384-18573403 | MS.gene061045:CDS | 55.0% | |
| CGCTCTGTAGTAGGAGACGT+GGG | + | chr1.4:18572479-18572498 | MS.gene061045:intron | 55.0% | |
| CGTTCCTTTGCCCTTCTTCC+CGG | - | chr1.4:18572294-18572313 | None:intergenic | 55.0% | |
| GATGACGAGGACTCGTCAGA+AGG | - | chr1.4:18573031-18573050 | None:intergenic | 55.0% | |
| GTGGAGAGATGAGGCGATTC+AGG | + | chr1.4:18573411-18573430 | MS.gene061045:CDS | 55.0% | |
| GTGTGCTCTTCTGTCACTGC+CGG | + | chr1.4:18572628-18572647 | MS.gene061045:CDS | 55.0% | |
| TCGCGGAATGTTACCGCAGA+CGG | - | chr1.4:18571392-18571411 | None:intergenic | 55.0% | |
| TCTGACGAGTCCTCGTCATC+TGG | + | chr1.4:18573031-18573050 | MS.gene061045:CDS | 55.0% | |
| TGTACCGGGAAGAAGGGCAA+AGG | + | chr1.4:18572287-18572306 | MS.gene061045:CDS | 55.0% | |
| ! | GGCCAATGGTGGAGGATTTG+TGG | + | chr1.4:18573392-18573411 | MS.gene061045:CDS | 55.0% |
| ! | TCAGGTTCAGGTTCGCGTTC+GGG | + | chr1.4:18571287-18571306 | MS.gene061045:CDS | 55.0% |
| AGCCCCCAGTTGAACGTTGG+CGG | + | chr1.4:18572032-18572051 | MS.gene061045:CDS | 60.0% | |
| AGCGACCGCCAACGTTCAAC+TGG | - | chr1.4:18572040-18572059 | None:intergenic | 60.0% | |
| CACTGCAGCCGCTCTGTAGT+AGG | + | chr1.4:18572470-18572489 | MS.gene061045:intron | 60.0% | |
| CCGCTCTGTAGTAGGAGACG+TGG | + | chr1.4:18572478-18572497 | MS.gene061045:intron | 60.0% | |
| CGACCGCCAACGTTCAACTG+GGG | - | chr1.4:18572038-18572057 | None:intergenic | 60.0% | |
| GACCGCCAACGTTCAACTGG+GGG | - | chr1.4:18572037-18572056 | None:intergenic | 60.0% | |
| GCCCCTCCAGCAGTATACCA+AGG | - | chr1.4:18572961-18572980 | None:intergenic | 60.0% | |
| GCGACCGCCAACGTTCAACT+GGG | - | chr1.4:18572039-18572058 | None:intergenic | 60.0% | |
| GCGCGAATATGGGCCAATGG+TGG | + | chr1.4:18573381-18573400 | MS.gene061045:CDS | 60.0% | |
| ! | TATACTGCTGGAGGGGCGCG+AGG | + | chr1.4:18572964-18572983 | MS.gene061045:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 18570924 | 18573923 | 18570924 | ID=MS.gene061045 |
| chr1.4 | mRNA | 18570924 | 18573923 | 18570924 | ID=MS.gene061045.t1;Parent=MS.gene061045 |
| chr1.4 | exon | 18570924 | 18571916 | 18570924 | ID=MS.gene061045.t1.exon1;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18570924 | 18571916 | 18570924 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| chr1.4 | exon | 18572005 | 18572142 | 18572005 | ID=MS.gene061045.t1.exon2;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18572005 | 18572142 | 18572005 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| chr1.4 | exon | 18572232 | 18572336 | 18572232 | ID=MS.gene061045.t1.exon3;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18572232 | 18572336 | 18572232 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| chr1.4 | exon | 18572611 | 18572781 | 18572611 | ID=MS.gene061045.t1.exon4;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18572611 | 18572781 | 18572611 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| chr1.4 | exon | 18572875 | 18573052 | 18572875 | ID=MS.gene061045.t1.exon5;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18572875 | 18573052 | 18572875 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| chr1.4 | exon | 18573254 | 18573498 | 18573254 | ID=MS.gene061045.t1.exon6;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18573254 | 18573498 | 18573254 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| chr1.4 | exon | 18573747 | 18573923 | 18573747 | ID=MS.gene061045.t1.exon7;Parent=MS.gene061045.t1 |
| chr1.4 | CDS | 18573747 | 18573923 | 18573747 | ID=cds.MS.gene061045.t1;Parent=MS.gene061045.t1 |
| Gene Sequence |
| Protein sequence |
