Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061682.t1 | XP_013466724.1 | 89 | 856 | 38 | 1 | 1 | 800 | 16 | 871 | 0.00E+00 | 1528.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061682.t1 | O80462 | 57.2 | 680 | 273 | 8 | 123 | 792 | 210 | 881 | 4.0e-222 | 772.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061682.t1 | A0A072VFF3 | 89.0 | 856 | 38 | 1 | 1 | 800 | 16 | 871 | 0.0e+00 | 1528.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049413 | MS.gene061682 | 0.831381 | 1.72E-55 | -1.69E-46 |
| MS.gene050669 | MS.gene061682 | 0.824343 | 8.50E-54 | -1.69E-46 |
| MS.gene050961 | MS.gene061682 | 0.827652 | 1.39E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene061682 | 0.835755 | 1.40E-56 | -1.69E-46 |
| MS.gene054893 | MS.gene061682 | 0.827599 | 1.43E-54 | -1.69E-46 |
| MS.gene05861 | MS.gene061682 | 0.848597 | 5.54E-60 | -1.69E-46 |
| MS.gene05862 | MS.gene061682 | 0.833709 | 4.56E-56 | -1.69E-46 |
| MS.gene05969 | MS.gene061682 | 0.843798 | 1.12E-58 | -1.69E-46 |
| MS.gene059774 | MS.gene061682 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene060413 | MS.gene061682 | 0.805747 | 1.15E-49 | -1.69E-46 |
| MS.gene06061 | MS.gene061682 | 0.814124 | 1.81E-51 | -1.69E-46 |
| MS.gene060697 | MS.gene061682 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene061045 | MS.gene061682 | 0.879308 | 1.39E-69 | -1.69E-46 |
| MS.gene061047 | MS.gene061682 | 0.852966 | 3.26E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061682.t1 | MTR_1g034300 | 86.449 | 856 | 60 | 4 | 1 | 800 | 16 | 871 | 0.0 | 1427 |
| MS.gene061682.t1 | MTR_1g034300 | 85.981 | 856 | 63 | 5 | 1 | 800 | 16 | 870 | 0.0 | 1419 |
| MS.gene061682.t1 | MTR_5g018510 | 58.050 | 677 | 274 | 4 | 124 | 792 | 226 | 900 | 0.0 | 816 |
| MS.gene061682.t1 | MTR_5g018510 | 57.965 | 678 | 274 | 5 | 124 | 792 | 226 | 901 | 0.0 | 812 |
| MS.gene061682.t1 | MTR_8g079010 | 57.726 | 686 | 277 | 6 | 107 | 782 | 85 | 767 | 0.0 | 805 |
| MS.gene061682.t1 | MTR_6g071360 | 44.310 | 826 | 385 | 13 | 12 | 776 | 39 | 850 | 0.0 | 654 |
| MS.gene061682.t1 | MTR_5g027970 | 49.311 | 653 | 308 | 9 | 138 | 777 | 171 | 813 | 0.0 | 615 |
| MS.gene061682.t1 | MTR_5g027970 | 52.482 | 423 | 188 | 6 | 138 | 552 | 171 | 588 | 4.53e-139 | 424 |
| MS.gene061682.t1 | MTR_1g015750 | 29.504 | 383 | 204 | 13 | 388 | 770 | 37 | 353 | 3.76e-41 | 155 |
| MS.gene061682.t1 | MTR_1g015750 | 29.504 | 383 | 204 | 13 | 388 | 770 | 45 | 361 | 5.41e-41 | 155 |
| MS.gene061682.t1 | MTR_1g015750 | 29.371 | 286 | 159 | 9 | 388 | 673 | 37 | 279 | 1.03e-27 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061682.t1 | AT2G23460 | 57.206 | 680 | 273 | 8 | 123 | 792 | 210 | 881 | 0.0 | 783 |
| MS.gene061682.t1 | AT4G34390 | 47.411 | 869 | 355 | 21 | 2 | 800 | 24 | 860 | 0.0 | 714 |
| MS.gene061682.t1 | AT4G34390 | 45.161 | 868 | 337 | 20 | 2 | 800 | 24 | 821 | 0.0 | 668 |
| MS.gene061682.t1 | AT1G31930 | 44.541 | 806 | 395 | 11 | 9 | 777 | 29 | 819 | 0.0 | 635 |
| MS.gene061682.t1 | AT1G31930 | 44.541 | 806 | 395 | 11 | 9 | 777 | 29 | 819 | 0.0 | 635 |
| MS.gene061682.t1 | AT1G31930 | 44.541 | 806 | 395 | 11 | 9 | 777 | 29 | 819 | 0.0 | 635 |
| MS.gene061682.t1 | AT1G31930 | 44.541 | 806 | 395 | 11 | 9 | 777 | 29 | 819 | 0.0 | 635 |
| MS.gene061682.t1 | AT1G31930 | 44.541 | 806 | 395 | 11 | 9 | 777 | 29 | 819 | 0.0 | 635 |
| MS.gene061682.t1 | AT1G31930 | 44.541 | 806 | 395 | 11 | 9 | 777 | 29 | 819 | 0.0 | 635 |
| MS.gene061682.t1 | AT2G26300 | 27.296 | 392 | 219 | 12 | 388 | 767 | 36 | 373 | 2.62e-39 | 150 |
| MS.gene061682.t1 | AT2G26300 | 27.296 | 392 | 219 | 12 | 388 | 767 | 36 | 373 | 2.62e-39 | 150 |
Find 155 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCTTCTTCTTGAAATT+TGG | 0.098655 | 1.3:+19024575 | None:intergenic |
| ATGACAAAGCTTCTGGATTT+TGG | 0.105208 | 1.3:-19027220 | MS.gene061682:CDS |
| ATCTTGAAAATAGGAATTTC+TGG | 0.197248 | 1.3:+19028107 | None:intergenic |
| TGTAATCTCGCGGTCATTTA+TGG | 0.209758 | 1.3:+19027008 | None:intergenic |
| CCAGCTGCTATGCGCGAATA+TGG | 0.211059 | 1.3:-19025732 | MS.gene061682:CDS |
| TCTTGTTATAAGTGTCTTAA+AGG | 0.219647 | 1.3:-19027596 | MS.gene061682:CDS |
| TGTAACATGTAATTCGATTC+AGG | 0.222562 | 1.3:+19027695 | None:intergenic |
| TTCCTCAAGAAGATCGAATT+TGG | 0.241366 | 1.3:+19024538 | None:intergenic |
| AACCAGTCACACCTTGTTAA+TGG | 0.243332 | 1.3:+19024500 | None:intergenic |
| GATCCTGGTTTAAGCTCTTT+AGG | 0.246063 | 1.3:+19027251 | None:intergenic |
| AAGAACTCTATTCGTTTCTT+TGG | 0.256046 | 1.3:-19024345 | MS.gene061682:CDS |
| TATTGGTATGACAAAGCTTC+TGG | 0.267593 | 1.3:-19027227 | MS.gene061682:CDS |
| GTGAAGGAACTCCTAACTTT+TGG | 0.268980 | 1.3:-19026850 | MS.gene061682:CDS |
| GAAGAATCATGTTGATATTC+AGG | 0.278566 | 1.3:+19025220 | None:intergenic |
| CTTGTTGGTTGTGTAAATTC+TGG | 0.288160 | 1.3:-19026365 | MS.gene061682:CDS |
| GTGGAGAGATGAGGCGATTC+AGG | 0.288381 | 1.3:-19025691 | MS.gene061682:CDS |
| TTACCAAGTGGTTGAATAAC+AGG | 0.298970 | 1.3:+19028029 | None:intergenic |
| TAACAAGACCCTTTCTTTCC+TGG | 0.308070 | 1.3:+19027611 | None:intergenic |
| ACTTGATCAATCTTGAAAAT+AGG | 0.308330 | 1.3:+19028098 | None:intergenic |
| AGCTTAAACCAGGATCTTAT+TGG | 0.314240 | 1.3:-19027244 | MS.gene061682:CDS |
| CTATTCGTTTCTTTGGTTAC+TGG | 0.317453 | 1.3:-19024338 | MS.gene061682:CDS |
| AGCGACCGCCAACGTTCAAC+TGG | 0.323370 | 1.3:+19027067 | None:intergenic |
| AGAGCTTCATCGATCGTATC+AGG | 0.331731 | 1.3:+19024308 | None:intergenic |
| ACCAACACATTTCCTTCCTT+CGG | 0.334879 | 1.3:+19027487 | None:intergenic |
| ATCAGGCTCAGGTTCGCGTT+CGG | 0.345378 | 1.3:-19027822 | MS.gene061682:CDS |
| TCAGGCTCAGGTTCGCGTTC+GGG | 0.349206 | 1.3:-19027821 | MS.gene061682:CDS |
| GACTGAAGAGTTTCTCAGAT+TGG | 0.349631 | 1.3:-19025797 | MS.gene061682:CDS |
| CAGTCTTGGACCAATTGAAT+AGG | 0.351169 | 1.3:+19025815 | None:intergenic |
| CCAACACATTTCCTTCCTTC+GGG | 0.357979 | 1.3:+19027488 | None:intergenic |
| GGAATCTTGGAAAATGTTCT+AGG | 0.358970 | 1.3:-19027430 | MS.gene061682:CDS |
| GAGAATAAGAGAAGGAATCT+TGG | 0.369931 | 1.3:-19027443 | MS.gene061682:CDS |
| AAGAGGGGCAAAAGAAAGAT+AGG | 0.372952 | 1.3:-19026802 | MS.gene061682:CDS |
| AGATTATGAACCATCTGATA+TGG | 0.373775 | 1.3:-19025335 | MS.gene061682:CDS |
| AAGAGTATTTACTAGAGAAT+AGG | 0.381469 | 1.3:-19026106 | MS.gene061682:CDS |
| TTGTGATTGTTACTTATAAC+CGG | 0.382473 | 1.3:+19024464 | None:intergenic |
| GACTTATCATTAACAATAGA+AGG | 0.384451 | 1.3:+19024245 | None:intergenic |
| ATCAAAATACTCGTCACTTT+CGG | 0.389342 | 1.3:+19027670 | None:intergenic |
| TGTGTTGGTTGCATTGGTTA+TGG | 0.389856 | 1.3:-19027473 | MS.gene061682:CDS |
| ACTTGTGCAGCAGGGAATTC+CGG | 0.393083 | 1.3:-19025858 | MS.gene061682:intron |
| ATCGATGAAGCTCTTCGATA+TGG | 0.397848 | 1.3:-19024299 | MS.gene061682:CDS |
| AAAAGAGCTGTTCATACTAA+AGG | 0.405297 | 1.3:-19026983 | MS.gene061682:intron |
| AGAAACGAATAGAGTTCTTT+CGG | 0.405571 | 1.3:+19024349 | None:intergenic |
| TCAGGATTCACCCAAAAGTT+AGG | 0.406978 | 1.3:+19026839 | None:intergenic |
| GATACAACACCCTATTCAAT+TGG | 0.408891 | 1.3:-19025825 | MS.gene061682:CDS |
| AGATGGTTCATAATCTATCT+TGG | 0.413177 | 1.3:+19025342 | None:intergenic |
| AGCATGTACTATATTTAAAC+AGG | 0.414927 | 1.3:-19026342 | MS.gene061682:intron |
| AGAAAATAGTTAGCACTTCT+CGG | 0.421346 | 1.3:+19025633 | None:intergenic |
| GTATACCAAGGTAGGTAAAC+AGG | 0.427336 | 1.3:+19026156 | None:intergenic |
| AGTCTTGGACCAATTGAATA+GGG | 0.432909 | 1.3:+19025816 | None:intergenic |
| AGAAAGATAGGGGATGCATA+TGG | 0.441893 | 1.3:-19026790 | MS.gene061682:CDS |
| CTTGTTATAAGTGTCTTAAA+GGG | 0.445597 | 1.3:-19027595 | MS.gene061682:CDS |
| CAGCTGCTATGCGCGAATAT+GGG | 0.447175 | 1.3:-19025731 | MS.gene061682:CDS |
| GCAATTAGACCAGGAAAGAA+AGG | 0.447720 | 1.3:-19027620 | MS.gene061682:CDS |
| GGCCAATGGTGGAGGATTTG+TGG | 0.449390 | 1.3:-19025710 | MS.gene061682:CDS |
| GTACTCATCGTAGTCAGTTA+AGG | 0.456869 | 1.3:+19024673 | None:intergenic |
| AACTGTGTGATAAGAGCAAT+GGG | 0.459073 | 1.3:-19027518 | MS.gene061682:CDS |
| CCATATTCGCGCATAGCAGC+TGG | 0.459253 | 1.3:+19025732 | None:intergenic |
| GTAACATGTAATTCGATTCA+GGG | 0.459735 | 1.3:+19027696 | None:intergenic |
| ATAAGCTCTTCTCTATTAAG+TGG | 0.463043 | 1.3:+19027299 | None:intergenic |
| GAATGGTTTAACTGAGAAAG+AGG | 0.463198 | 1.3:-19027573 | MS.gene061682:CDS |
| CGATTCAGGCAACATACAAC+AGG | 0.465505 | 1.3:-19025677 | MS.gene061682:CDS |
| GAAAGATAGGGGATGCATAT+GGG | 0.466336 | 1.3:-19026789 | MS.gene061682:CDS |
| TTCCATTAACAAGGTGTGAC+TGG | 0.468855 | 1.3:-19024502 | MS.gene061682:CDS |
| TACCTACCTTGGTATACTGC+TGG | 0.469509 | 1.3:-19026150 | MS.gene061682:CDS |
| CTTTCTTCAGGCTCAAACAA+AGG | 0.470122 | 1.3:-19026501 | MS.gene061682:intron |
| CTAATTGCATGTGGCTTCAA+TGG | 0.477713 | 1.3:+19027635 | None:intergenic |
| TGAAGTACTTGCATCTCCAT+TGG | 0.478445 | 1.3:+19024205 | None:intergenic |
| GAAGAAGCTATGGATGCAAC+AGG | 0.481318 | 1.3:+19028074 | None:intergenic |
| TATAAGTGTCTTAAAGGGAA+TGG | 0.483807 | 1.3:-19027590 | MS.gene061682:CDS |
| AGCAACCTGTTTACCTACCT+TGG | 0.486761 | 1.3:-19026161 | MS.gene061682:CDS |
| TTTGAAGTGCCTTGTGATGA+AGG | 0.488646 | 1.3:+19026396 | None:intergenic |
| TCTGAGAAACTCTTCAGTCT+TGG | 0.490044 | 1.3:+19025801 | None:intergenic |
| TTGTCATACCAATAAGATCC+TGG | 0.493441 | 1.3:+19027236 | None:intergenic |
| TGGTAGAGAGGTTATTGAAT+GGG | 0.498729 | 1.3:-19024279 | MS.gene061682:CDS |
| ATCAACATGATTCTTCTCTC+AGG | 0.498919 | 1.3:-19025213 | MS.gene061682:intron |
| TATTGTTGATCAAGTTATGA+AGG | 0.500834 | 1.3:-19027381 | MS.gene061682:CDS |
| ATCAAGTTATGAAGGATGAA+AGG | 0.501841 | 1.3:-19027373 | MS.gene061682:CDS |
| AGGAAATGTGTTGGTTGCAT+TGG | 0.505797 | 1.3:-19027479 | MS.gene061682:CDS |
| ATCCAACAGCCTCACATCAA+TGG | 0.506050 | 1.3:-19025284 | MS.gene061682:CDS |
| TCTGACGAGTCCTCTTCATC+TGG | 0.507154 | 1.3:-19026071 | MS.gene061682:intron |
| CGAATATGGGCCAATGGTGG+AGG | 0.511353 | 1.3:-19025718 | MS.gene061682:CDS |
| ATGAGAAAGAGAAGAAGCTA+TGG | 0.511449 | 1.3:+19028064 | None:intergenic |
| TCTTCGCGGTATGATCCATC+AGG | 0.512861 | 1.3:+19026821 | None:intergenic |
| CTCCACAAATCCTCCACCAT+TGG | 0.517066 | 1.3:+19025708 | None:intergenic |
| AAAGCACTTTGAGCTAATGA+AGG | 0.521537 | 1.3:+19024416 | None:intergenic |
| TTGGATGTACTCTAATGAGT+TGG | 0.523296 | 1.3:+19024765 | None:intergenic |
| TTGTGCTATTCTGTCACTGC+CGG | 0.525408 | 1.3:-19026474 | MS.gene061682:CDS |
| CACCAAATTCGATCTTCTTG+AGG | 0.526416 | 1.3:-19024540 | MS.gene061682:CDS |
| GACTCCTCTCTGCTTGACTT+AGG | 0.527015 | 1.3:+19025250 | None:intergenic |
| AGTGCCTTGTGATGAAGGCT+TGG | 0.528771 | 1.3:+19026401 | None:intergenic |
| ATGGTAGAGAGGTTATTGAA+TGG | 0.529478 | 1.3:-19024280 | MS.gene061682:CDS |
| TACCTTGGTATACTGCTGGA+GGG | 0.538217 | 1.3:-19026146 | MS.gene061682:CDS |
| CCACCTAAAGAGCTTAAACC+AGG | 0.542032 | 1.3:-19027254 | MS.gene061682:CDS |
| TTCCATTGATGTGAGGCTGT+TGG | 0.543616 | 1.3:+19025282 | None:intergenic |
| GATGGATCATACCGCGAAGA+GGG | 0.548358 | 1.3:-19026818 | MS.gene061682:CDS |
| TGGAGAAAACTGCAAGTGGT+TGG | 0.551701 | 1.3:-19024735 | MS.gene061682:CDS |
| TTTCCTGGTCTAATTGCATG+TGG | 0.553272 | 1.3:+19027626 | None:intergenic |
| TGAGCTTCAAAATATCAAGT+TGG | 0.558146 | 1.3:-19026192 | MS.gene061682:CDS |
| CTACCTTGGTATACTGCTGG+AGG | 0.561329 | 1.3:-19026147 | MS.gene061682:CDS |
| GCGACCGCCAACGTTCAACT+GGG | 0.564176 | 1.3:+19027068 | None:intergenic |
| CAATTAGACCAGGAAAGAAA+GGG | 0.566155 | 1.3:-19027619 | MS.gene061682:CDS |
| TAGGGGATGCATATGGGGCA+AGG | 0.566437 | 1.3:-19026783 | MS.gene061682:intron |
| GAGATTACTTCAACAACCAA+TGG | 0.567210 | 1.3:-19024221 | MS.gene061682:CDS |
| TATAATATGTCCATATCAGA+TGG | 0.568576 | 1.3:+19025325 | None:intergenic |
| AAACTGTGTGATAAGAGCAA+TGG | 0.568819 | 1.3:-19027519 | MS.gene061682:CDS |
| GTACCTGTTATTCAACCACT+TGG | 0.572932 | 1.3:-19028032 | MS.gene061682:intron |
| GATACAATAGAATCAGGCTC+AGG | 0.576861 | 1.3:-19027833 | MS.gene061682:intron |
| AGAGGGGCAAAAGAAAGATA+GGG | 0.580081 | 1.3:-19026801 | MS.gene061682:CDS |
| CCTGGTTTAAGCTCTTTAGG+TGG | 0.582235 | 1.3:+19027254 | None:intergenic |
| TCGCGGAATGTTACCGCAGA+CGG | 0.585486 | 1.3:+19027719 | None:intergenic |
| GACCGCCAACGTTCAACTGG+GGG | 0.587168 | 1.3:+19027070 | None:intergenic |
| AGTTGCTACAAACAAAATGT+TGG | 0.587657 | 1.3:-19024633 | MS.gene061682:CDS |
| TGGGATCTATGCCCGAAGGA+AGG | 0.587801 | 1.3:-19027499 | MS.gene061682:CDS |
| TCTGGTATTGAATGATCAAG+AGG | 0.593030 | 1.3:+19028125 | None:intergenic |
| AAAGATAGGGGATGCATATG+GGG | 0.597578 | 1.3:-19026788 | MS.gene061682:CDS |
| TATGGACATATTATATGCTG+AGG | 0.599670 | 1.3:-19025317 | MS.gene061682:CDS |
| GAGTACATTATAGACAGTAA+AGG | 0.599991 | 1.3:-19024656 | MS.gene061682:CDS |
| AGGAGCATTATACAACAGCT+TGG | 0.600716 | 1.3:+19026226 | None:intergenic |
| TTGCAGAGAAACGCAAGCAA+TGG | 0.605462 | 1.3:-19027045 | MS.gene061682:CDS |
| TATACTGCTGGAGGGGCGCG+AGG | 0.606831 | 1.3:-19026138 | MS.gene061682:CDS |
| ATGGCAAGAGTGCCATGTGA+AGG | 0.609127 | 1.3:-19026866 | MS.gene061682:CDS |
| CTCCAGCAGTATACCAAGGT+AGG | 0.613672 | 1.3:+19026148 | None:intergenic |
| GATGAAGAGGACTCGTCAGA+AGG | 0.614501 | 1.3:+19026074 | None:intergenic |
| AAAACCAAGCCTTCATCACA+AGG | 0.615412 | 1.3:-19026405 | MS.gene061682:CDS |
| TCCTTGGAGAAAACTGCAAG+TGG | 0.617052 | 1.3:-19024739 | MS.gene061682:CDS |
| ATCGTAGTCAGTTAAGGAGA+CGG | 0.619647 | 1.3:+19024679 | None:intergenic |
| ATGGACATATTATATGCTGA+GGG | 0.622333 | 1.3:-19025316 | MS.gene061682:CDS |
| GCGCGAATATGGGCCAATGG+TGG | 0.623909 | 1.3:-19025721 | MS.gene061682:CDS |
| AAGCCACATGCAATTAGACC+AGG | 0.626676 | 1.3:-19027629 | MS.gene061682:CDS |
| TGTAATTCGATTCAGGGTCG+CGG | 0.626751 | 1.3:+19027702 | None:intergenic |
| AAGTTAGGAGTTCCTTCACA+TGG | 0.628090 | 1.3:+19026854 | None:intergenic |
| TATTGAACATATCTCACAAG+AGG | 0.628942 | 1.3:+19027787 | None:intergenic |
| TCGAACATGTTCCATTAACA+AGG | 0.629726 | 1.3:-19024511 | MS.gene061682:CDS |
| ACCTTGGTATACTGCTGGAG+GGG | 0.631322 | 1.3:-19026145 | MS.gene061682:CDS |
| GGAGGATTTGTGGAGAGATG+AGG | 0.636236 | 1.3:-19025700 | MS.gene061682:CDS |
| ATGGATCATACCGCGAAGAG+GGG | 0.641577 | 1.3:-19026817 | MS.gene061682:CDS |
| ATGAAAATTCCATTGATGTG+AGG | 0.646392 | 1.3:+19025275 | None:intergenic |
| GAGGGGCAAAAGAAAGATAG+GGG | 0.650210 | 1.3:-19026800 | MS.gene061682:CDS |
| GAATTGATGAGAATAAGAGA+AGG | 0.652584 | 1.3:-19027451 | MS.gene061682:CDS |
| TATGCGCGAATATGGGCCAA+TGG | 0.657600 | 1.3:-19025724 | MS.gene061682:CDS |
| ATTGAACATATCTCACAAGA+GGG | 0.658457 | 1.3:+19027788 | None:intergenic |
| CGACCGCCAACGTTCAACTG+GGG | 0.660405 | 1.3:+19027069 | None:intergenic |
| ATTTCCTAAGTCAAGCAGAG+AGG | 0.661953 | 1.3:-19025254 | MS.gene061682:CDS |
| CCCGAAGGAAGGAAATGTGT+TGG | 0.662764 | 1.3:-19027488 | MS.gene061682:CDS |
| TGATGGATCATACCGCGAAG+AGG | 0.665695 | 1.3:-19026819 | MS.gene061682:CDS |
| GGTATTGAATGATCAAGAGG+AGG | 0.670723 | 1.3:+19028128 | None:intergenic |
| GGGCTGATAATTTCACAAGG+TGG | 0.676747 | 1.3:+19027090 | None:intergenic |
| GACGGAGAACAAAATAACAT+CGG | 0.680660 | 1.3:+19024697 | None:intergenic |
| GCAATGGGATCTATGCCCGA+AGG | 0.681319 | 1.3:-19027503 | MS.gene061682:CDS |
| AGCTCTTCGATATGGTAGAG+AGG | 0.683781 | 1.3:-19024291 | MS.gene061682:CDS |
| ACATGTTAAGAATCCGTCTG+CGG | 0.688376 | 1.3:-19027732 | MS.gene061682:CDS |
| AAGTTAACTTGAACAAGACG+AGG | 0.700700 | 1.3:+19027326 | None:intergenic |
| GCCCCTCCAGCAGTATACCA+AGG | 0.716032 | 1.3:+19026144 | None:intergenic |
| TTAACTTGAACAAGACGAGG+CGG | 0.723838 | 1.3:+19027329 | None:intergenic |
| TGGACATATTATATGCTGAG+GGG | 0.726727 | 1.3:-19025315 | MS.gene061682:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTAGAATGAAAAATAAA+AGG | + | chr1.3:19025455-19025474 | None:intergenic | 15.0% |
| !! | AATTTCTTCTTCTTGAAATT+TGG | + | chr1.3:19027821-19027840 | None:intergenic | 20.0% |
| !!! | ACTGAAATTTTATTTCTACT+TGG | + | chr1.3:19027248-19027267 | None:intergenic | 20.0% |
| !!! | TATCTGTTTTCTTTTGAAAT+GGG | - | chr1.3:19025849-19025868 | MS.gene061682:CDS | 20.0% |
| !!! | TTGCTAATAATGGAATAATT+TGG | - | chr1.3:19027312-19027331 | MS.gene061682:CDS | 20.0% |
| !!! | TTTATCTATTGTTTTAGAGT+CGG | - | chr1.3:19027548-19027567 | MS.gene061682:CDS | 20.0% |
| ! | AAACGATTAATCATGAAGTA+CGG | + | chr1.3:19027508-19027527 | None:intergenic | 25.0% |
| ! | ACATGATGAGATTCTAAATT+TGG | + | chr1.3:19024449-19024468 | None:intergenic | 25.0% |
| ! | ACTTGATCAATCTTGAAAAT+AGG | + | chr1.3:19024298-19024317 | None:intergenic | 25.0% |
| ! | AGCATGTACTATATTTAAAC+AGG | - | chr1.3:19026051-19026070 | MS.gene061682:intron | 25.0% |
| ! | AGTAACAATCACAAAAAATG+TGG | - | chr1.3:19027938-19027957 | MS.gene061682:intron | 25.0% |
| ! | ATAAACAGTAGAATCTGAAA+TGG | + | chr1.3:19024426-19024445 | None:intergenic | 25.0% |
| ! | ATCTTGAAAATAGGAATTTC+TGG | + | chr1.3:19024289-19024308 | None:intergenic | 25.0% |
| ! | ATTAAATTCACAGTACACAA+AGG | + | chr1.3:19026451-19026470 | None:intergenic | 25.0% |
| ! | CAACTTGTATTCAAATACTA+CGG | + | chr1.3:19025706-19025725 | None:intergenic | 25.0% |
| ! | CTAAATAATCACAAAACTGA+AGG | + | chr1.3:19026493-19026512 | None:intergenic | 25.0% |
| ! | CTAAATATCTATGTGAATGT+AGG | - | chr1.3:19027016-19027035 | MS.gene061682:CDS | 25.0% |
| ! | CTTCAAAAATTTCTACTTGT+TGG | - | chr1.3:19026013-19026032 | MS.gene061682:intron | 25.0% |
| ! | CTTTCACTTTGAACAAAAAT+AGG | + | chr1.3:19027291-19027310 | None:intergenic | 25.0% |
| ! | GACTTATCATTAACAATAGA+AGG | + | chr1.3:19028151-19028170 | None:intergenic | 25.0% |
| ! | GTTATGAGTAGTGAATAATT+AGG | + | chr1.3:19026418-19026437 | None:intergenic | 25.0% |
| ! | GTTGTAATACTTGATTATAC+AGG | - | chr1.3:19025272-19025291 | MS.gene061682:CDS | 25.0% |
| ! | TAATACTTGATTATACAGGA+AGG | - | chr1.3:19025276-19025295 | MS.gene061682:CDS | 25.0% |
| ! | TATAATATGTCCATATCAGA+TGG | + | chr1.3:19027071-19027090 | None:intergenic | 25.0% |
| ! | TATTGTTGATCAAGTTATGA+AGG | - | chr1.3:19025012-19025031 | MS.gene061682:intron | 25.0% |
| ! | TCTAACAAATTTCTTTCTTC+AGG | - | chr1.3:19025880-19025899 | MS.gene061682:intron | 25.0% |
| ! | TCTAAGCTTGATTTATAGAA+AGG | - | chr1.3:19025738-19025757 | MS.gene061682:CDS | 25.0% |
| ! | TGTACTATATTTAAACAGGT+TGG | - | chr1.3:19026055-19026074 | MS.gene061682:intron | 25.0% |
| !! | AAGATTGAATCTTTTGTCTT+AGG | - | chr1.3:19026144-19026163 | MS.gene061682:CDS | 25.0% |
| !! | CTTGTTATAAGTGTCTTAAA+GGG | - | chr1.3:19024798-19024817 | MS.gene061682:intron | 25.0% |
| !! | TCTTGTTATAAGTGTCTTAA+AGG | - | chr1.3:19024797-19024816 | MS.gene061682:intron | 25.0% |
| !! | TTAAGAGTCATAGATTTTGA+AGG | + | chr1.3:19025947-19025966 | None:intergenic | 25.0% |
| !! | TTACTTAAATGCATTTTGTC+AGG | - | chr1.3:19026619-19026638 | MS.gene061682:intron | 25.0% |
| !! | TTGTGATTGTTACTTATAAC+CGG | + | chr1.3:19027932-19027951 | None:intergenic | 25.0% |
| !!! | AAGAGTATTTACTAGAGAAT+AGG | - | chr1.3:19026287-19026306 | MS.gene061682:intron | 25.0% |
| !!! | AAGTGAAAGTTTGCTAATAA+TGG | - | chr1.3:19027302-19027321 | MS.gene061682:CDS | 25.0% |
| !!! | AATAATTAGGCAGAAGTATT+AGG | + | chr1.3:19026405-19026424 | None:intergenic | 25.0% |
| !!! | ATAATTAGGCAGAAGTATTA+GGG | + | chr1.3:19026404-19026423 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTCTTTTGAAATG+GGG | - | chr1.3:19025850-19025869 | MS.gene061682:CDS | 25.0% |
| !!! | CAATGTTACATTAGCTTTAT+TGG | + | chr1.3:19025496-19025515 | None:intergenic | 25.0% |
| !!! | GTATCTGTTTTCTTTTGAAA+TGG | - | chr1.3:19025848-19025867 | MS.gene061682:CDS | 25.0% |
| !!! | TATATTTAAACAGGTTGGTT+TGG | - | chr1.3:19026060-19026079 | MS.gene061682:intron | 25.0% |
| !!! | TTATCTATTGTTTTAGAGTC+GGG | - | chr1.3:19027549-19027568 | MS.gene061682:CDS | 25.0% |
| AAAAGAGCTGTTCATACTAA+AGG | - | chr1.3:19025410-19025429 | MS.gene061682:intron | 30.0% | |
| AACTCTGATACAATAGAATC+AGG | - | chr1.3:19024554-19024573 | MS.gene061682:CDS | 30.0% | |
| AAGAACTCTATTCGTTTCTT+TGG | - | chr1.3:19028048-19028067 | MS.gene061682:CDS | 30.0% | |
| AGAAAATAGTTAGCACTTCT+CGG | + | chr1.3:19026763-19026782 | None:intergenic | 30.0% | |
| AGAAACGAATAGAGTTCTTT+CGG | + | chr1.3:19028047-19028066 | None:intergenic | 30.0% | |
| AGATGGTTCATAATCTATCT+TGG | + | chr1.3:19027054-19027073 | None:intergenic | 30.0% | |
| AGATTATGAACCATCTGATA+TGG | - | chr1.3:19027058-19027077 | MS.gene061682:CDS | 30.0% | |
| AGGTTATTGAATGGGAAAAA+TGG | - | chr1.3:19028122-19028141 | MS.gene061682:CDS | 30.0% | |
| AGTTGCTACAAACAAAATGT+TGG | - | chr1.3:19027760-19027779 | MS.gene061682:CDS | 30.0% | |
| ATAAGCTCTTCTCTATTAAG+TGG | + | chr1.3:19025097-19025116 | None:intergenic | 30.0% | |
| ATCAAGTTATGAAGGATGAA+AGG | - | chr1.3:19025020-19025039 | MS.gene061682:intron | 30.0% | |
| ATGAAAATTCCATTGATGTG+AGG | + | chr1.3:19027121-19027140 | None:intergenic | 30.0% | |
| ATGGACATATTATATGCTGA+GGG | - | chr1.3:19027077-19027096 | MS.gene061682:CDS | 30.0% | |
| ATTGAACATATCTCACAAGA+GGG | + | chr1.3:19024608-19024627 | None:intergenic | 30.0% | |
| CACAAAAAATGTGGTAACAA+TGG | - | chr1.3:19027947-19027966 | MS.gene061682:intron | 30.0% | |
| CTAGTATCATCGAAAGTTTA+AGG | - | chr1.3:19027368-19027387 | MS.gene061682:CDS | 30.0% | |
| GAAGAATCATGTTGATATTC+AGG | + | chr1.3:19027176-19027195 | None:intergenic | 30.0% | |
| GAATTGATGAGAATAAGAGA+AGG | - | chr1.3:19024942-19024961 | MS.gene061682:intron | 30.0% | |
| GAGTACATTATAGACAGTAA+AGG | - | chr1.3:19027737-19027756 | MS.gene061682:CDS | 30.0% | |
| GGTTATTGAATGGGAAAAAT+GGG | - | chr1.3:19028123-19028142 | MS.gene061682:CDS | 30.0% | |
| GTAACATGTAATTCGATTCA+GGG | + | chr1.3:19024700-19024719 | None:intergenic | 30.0% | |
| GTATTATTCTGTCATGAATG+TGG | - | chr1.3:19026965-19026984 | MS.gene061682:intron | 30.0% | |
| TATAAGTGTCTTAAAGGGAA+TGG | - | chr1.3:19024803-19024822 | MS.gene061682:intron | 30.0% | |
| TATGGACATATTATATGCTG+AGG | - | chr1.3:19027076-19027095 | MS.gene061682:CDS | 30.0% | |
| TATTGAACATATCTCACAAG+AGG | + | chr1.3:19024609-19024628 | None:intergenic | 30.0% | |
| TCAAGTATTACAACAGCATT+AGG | + | chr1.3:19025266-19025285 | None:intergenic | 30.0% | |
| TCTATTGTATCAGAGTTTGT+TGG | + | chr1.3:19024551-19024570 | None:intergenic | 30.0% | |
| TCTTTAGTAACCCAAAATGA+AGG | + | chr1.3:19026128-19026147 | None:intergenic | 30.0% | |
| TGAGCTTCAAAATATCAAGT+TGG | - | chr1.3:19026201-19026220 | MS.gene061682:CDS | 30.0% | |
| TGTAACATGTAATTCGATTC+AGG | + | chr1.3:19024701-19024720 | None:intergenic | 30.0% | |
| TTAAGCTCTTATTCAACTAG+AGG | + | chr1.3:19025230-19025249 | None:intergenic | 30.0% | |
| TTATAGTAGCATAGTGCATA+GGG | + | chr1.3:19027468-19027487 | None:intergenic | 30.0% | |
| TTGATATTCTTGAGCCAAAA+GGG | + | chr1.3:19026824-19026843 | None:intergenic | 30.0% | |
| TTTGATATTCTTGAGCCAAA+AGG | + | chr1.3:19026825-19026844 | None:intergenic | 30.0% | |
| ! | AATGAAGGAGCATATATGAA+TGG | + | chr1.3:19026113-19026132 | None:intergenic | 30.0% |
| ! | ATCAAAATACTCGTCACTTT+CGG | + | chr1.3:19024726-19024745 | None:intergenic | 30.0% |
| ! | CATATATGCTCCTTCATTTT+GGG | - | chr1.3:19026115-19026134 | MS.gene061682:CDS | 30.0% |
| ! | GAGCAATGATGTTTTCAAAT+AGG | + | chr1.3:19027796-19027815 | None:intergenic | 30.0% |
| ! | TCATATATGCTCCTTCATTT+TGG | - | chr1.3:19026114-19026133 | MS.gene061682:CDS | 30.0% |
| ! | TGCTAACTATTTTCTAGACA+GGG | - | chr1.3:19026768-19026787 | MS.gene061682:intron | 30.0% |
| ! | TGTTGTATCAACATTTTCAC+CGG | + | chr1.3:19026557-19026576 | None:intergenic | 30.0% |
| ! | TTGTGATGCAACTTTTTGTT+TGG | - | chr1.3:19025643-19025662 | MS.gene061682:CDS | 30.0% |
| !! | TAATGAGTTGGTATCTGTTA+GGG | + | chr1.3:19027619-19027638 | None:intergenic | 30.0% |
| !!! | TCTGTTTTCTTTTGAAATGG+GGG | - | chr1.3:19025851-19025870 | MS.gene061682:CDS | 30.0% |
| !!! | TCTTTTGCTGTTGTATACAA+TGG | - | chr1.3:19024241-19024260 | MS.gene061682:CDS | 30.0% |
| AAAAAGCTTACCAGATGAAG+AGG | + | chr1.3:19026335-19026354 | None:intergenic | 35.0% | |
| AAACTGTGTGATAAGAGCAA+TGG | - | chr1.3:19024874-19024893 | MS.gene061682:intron | 35.0% | |
| AACTGTGTGATAAGAGCAAT+GGG | - | chr1.3:19024875-19024894 | MS.gene061682:intron | 35.0% | |
| AACTTTCGATGATACTAGCA+AGG | + | chr1.3:19027366-19027385 | None:intergenic | 35.0% | |
| AGAGTACATCCAAAAATCCT+TGG | - | chr1.3:19027638-19027657 | MS.gene061682:CDS | 35.0% | |
| AGCTTAAACCAGGATCTTAT+TGG | - | chr1.3:19025149-19025168 | MS.gene061682:intron | 35.0% | |
| AGTCTTGGACCAATTGAATA+GGG | + | chr1.3:19026580-19026599 | None:intergenic | 35.0% | |
| ATCAACATGATTCTTCTCTC+AGG | - | chr1.3:19027180-19027199 | MS.gene061682:intron | 35.0% | |
| ATGAGAAAGAGAAGAAGCTA+TGG | + | chr1.3:19024332-19024351 | None:intergenic | 35.0% | |
| ATGGTAGAGAGGTTATTGAA+TGG | - | chr1.3:19028113-19028132 | MS.gene061682:CDS | 35.0% | |
| CAACTCGAGTTTAAGTACTA+TGG | - | chr1.3:19027402-19027421 | MS.gene061682:CDS | 35.0% | |
| CAATTAGACCAGGAAAGAAA+GGG | - | chr1.3:19024774-19024793 | MS.gene061682:intron | 35.0% | |
| CTATTCGTTTCTTTGGTTAC+TGG | - | chr1.3:19028055-19028074 | MS.gene061682:CDS | 35.0% | |
| CTGTTAGGGAACATAAAGTA+GGG | + | chr1.3:19027605-19027624 | None:intergenic | 35.0% | |
| CTTATAGTAGCATAGTGCAT+AGG | + | chr1.3:19027469-19027488 | None:intergenic | 35.0% | |
| GAAGACACGATATTTCATCA+CGG | + | chr1.3:19025812-19025831 | None:intergenic | 35.0% | |
| GAATGGTTTAACTGAGAAAG+AGG | - | chr1.3:19024820-19024839 | MS.gene061682:intron | 35.0% | |
| GACGGAGAACAAAATAACAT+CGG | + | chr1.3:19027699-19027718 | None:intergenic | 35.0% | |
| GAGAATAAGAGAAGGAATCT+TGG | - | chr1.3:19024950-19024969 | MS.gene061682:intron | 35.0% | |
| GAGATTACTTCAACAACCAA+TGG | - | chr1.3:19028172-19028191 | MS.gene061682:CDS | 35.0% | |
| GATACAACACCCTATTCAAT+TGG | - | chr1.3:19026568-19026587 | MS.gene061682:intron | 35.0% | |
| GCACTATGCTACTATAAGTT+AGG | - | chr1.3:19027471-19027490 | MS.gene061682:CDS | 35.0% | |
| GGAATCTTGGAAAATGTTCT+AGG | - | chr1.3:19024963-19024982 | MS.gene061682:intron | 35.0% | |
| TAACATTGCTTGTTTGCAGA+TGG | - | chr1.3:19025508-19025527 | MS.gene061682:intron | 35.0% | |
| TATTGGTATGACAAAGCTTC+TGG | - | chr1.3:19025166-19025185 | MS.gene061682:intron | 35.0% | |
| TCGAACATGTTCCATTAACA+AGG | - | chr1.3:19027882-19027901 | MS.gene061682:intron | 35.0% | |
| TCTGTTAGGGAACATAAAGT+AGG | + | chr1.3:19027606-19027625 | None:intergenic | 35.0% | |
| TGGACATATTATATGCTGAG+GGG | - | chr1.3:19027078-19027097 | MS.gene061682:CDS | 35.0% | |
| TGGTAGAGAGGTTATTGAAT+GGG | - | chr1.3:19028114-19028133 | MS.gene061682:CDS | 35.0% | |
| TTACCAAGTGGTTGAATAAC+AGG | + | chr1.3:19024367-19024386 | None:intergenic | 35.0% | |
| TTCCTCAAGAAGATCGAATT+TGG | + | chr1.3:19027858-19027877 | None:intergenic | 35.0% | |
| TTGGATGTACTCTAATGAGT+TGG | + | chr1.3:19027631-19027650 | None:intergenic | 35.0% | |
| TTGTCATACCAATAAGATCC+TGG | + | chr1.3:19025160-19025179 | None:intergenic | 35.0% | |
| TTGTGATGAACTTTACCAAG+TGG | + | chr1.3:19024379-19024398 | None:intergenic | 35.0% | |
| ! | AAAGCACTTTGAGCTAATGA+AGG | + | chr1.3:19027980-19027999 | None:intergenic | 35.0% |
| ! | AAGTTAACTTGAACAAGACG+AGG | + | chr1.3:19025070-19025089 | None:intergenic | 35.0% |
| ! | ATGACAAAGCTTCTGGATTT+TGG | - | chr1.3:19025173-19025192 | MS.gene061682:intron | 35.0% |
| ! | ATGCATTTTGTCAGGTAACA+TGG | - | chr1.3:19026627-19026646 | MS.gene061682:intron | 35.0% |
| ! | CAGTTTTCTCCAAGGATTTT+TGG | + | chr1.3:19027650-19027669 | None:intergenic | 35.0% |
| ! | CTTGTTGGTTGTGTAAATTC+TGG | - | chr1.3:19026028-19026047 | MS.gene061682:intron | 35.0% |
| ! | GTGCTAACTATTTTCTAGAC+AGG | - | chr1.3:19026767-19026786 | MS.gene061682:intron | 35.0% |
| ! | TCAGATCATTGATACCCTTT+TGG | - | chr1.3:19026807-19026826 | MS.gene061682:CDS | 35.0% |
| ! | TCTGGTATTGAATGATCAAG+AGG | + | chr1.3:19024271-19024290 | None:intergenic | 35.0% |
| ! | TGAAGCTCATTTTCAGAGAA+AGG | + | chr1.3:19026190-19026209 | None:intergenic | 35.0% |
| ! | TGAAGGAACTCCTAACTTTT+GGG | - | chr1.3:19025544-19025563 | MS.gene061682:intron | 35.0% |
| ! | TGACAAAGCTTCTGGATTTT+GGG | - | chr1.3:19025174-19025193 | MS.gene061682:intron | 35.0% |
| !! | AGGGGTACTACTATATAAAC+TGG | + | chr1.3:19027429-19027448 | None:intergenic | 35.0% |
| !! | CTAATGAGTTGGTATCTGTT+AGG | + | chr1.3:19027620-19027639 | None:intergenic | 35.0% |
| !! | GTCATAGATTTTGAAGGAAC+CGG | + | chr1.3:19025941-19025960 | None:intergenic | 35.0% |
| !!! | AGTGACGAGTATTTTGATAG+TGG | - | chr1.3:19024728-19024747 | MS.gene061682:CDS | 35.0% |
| !!! | CTGGTTTTGTGAATTCAATC+CGG | - | chr1.3:19027910-19027929 | MS.gene061682:intron | 35.0% |
| !!! | GCTCTTTTTTTGTAATCTCG+CGG | + | chr1.3:19025398-19025417 | None:intergenic | 35.0% |
| !!! | GGTAAGAAAGCTTTTAGAAC+AGG | + | chr1.3:19027578-19027597 | None:intergenic | 35.0% |
| AAAACCAAGCCTTCATCACA+AGG | - | chr1.3:19025988-19026007 | MS.gene061682:intron | 40.0% | |
| AAAGATAGGGGATGCATATG+GGG | - | chr1.3:19025605-19025624 | MS.gene061682:intron | 40.0% | |
| AACCAGTCACACCTTGTTAA+TGG | + | chr1.3:19027896-19027915 | None:intergenic | 40.0% | |
| AAGAGGGGCAAAAGAAAGAT+AGG | - | chr1.3:19025591-19025610 | MS.gene061682:intron | 40.0% | |
| AAGCACTTGTGAGATTGCTT+AGG | + | chr1.3:19026359-19026378 | None:intergenic | 40.0% | |
| AAGTTAGGAGTTCCTTCACA+TGG | + | chr1.3:19025542-19025561 | None:intergenic | 40.0% | |
| ACATGTTAAGAATCCGTCTG+CGG | - | chr1.3:19024661-19024680 | MS.gene061682:CDS | 40.0% | |
| ACCAACACATTTCCTTCCTT+CGG | + | chr1.3:19024909-19024928 | None:intergenic | 40.0% | |
| AGAAAGATAGGGGATGCATA+TGG | - | chr1.3:19025603-19025622 | MS.gene061682:intron | 40.0% | |
| AGAGGGGCAAAAGAAAGATA+GGG | - | chr1.3:19025592-19025611 | MS.gene061682:intron | 40.0% | |
| AGGGAACATAAAGTAGGGTT+AGG | + | chr1.3:19027600-19027619 | None:intergenic | 40.0% | |
| ATCGATGAAGCTCTTCGATA+TGG | - | chr1.3:19028094-19028113 | MS.gene061682:CDS | 40.0% | |
| ATCGTAGTCAGTTAAGGAGA+CGG | + | chr1.3:19027717-19027736 | None:intergenic | 40.0% | |
| ATTTCCTAAGTCAAGCAGAG+AGG | - | chr1.3:19027139-19027158 | MS.gene061682:intron | 40.0% | |
| CAAGTTTACTGTGTCAACAG+TGG | - | chr1.3:19026913-19026932 | MS.gene061682:intron | 40.0% | |
| CACCAAATTCGATCTTCTTG+AGG | - | chr1.3:19027853-19027872 | MS.gene061682:intron | 40.0% | |
| CAGTCTTGGACCAATTGAAT+AGG | + | chr1.3:19026581-19026600 | None:intergenic | 40.0% | |
| CGATATTTCATCACGGAGTT+TGG | + | chr1.3:19025805-19025824 | None:intergenic | 40.0% | |
| CTAATTGCATGTGGCTTCAA+TGG | + | chr1.3:19024761-19024780 | None:intergenic | 40.0% | |
| CTTTCTTCAGGCTCAAACAA+AGG | - | chr1.3:19025892-19025911 | MS.gene061682:intron | 40.0% | |
| GAAAGATAGGGGATGCATAT+GGG | - | chr1.3:19025604-19025623 | MS.gene061682:intron | 40.0% | |
| GACTGAAGAGTTTCTCAGAT+TGG | - | chr1.3:19026596-19026615 | MS.gene061682:intron | 40.0% | |
| GATACAATAGAATCAGGCTC+AGG | - | chr1.3:19024560-19024579 | MS.gene061682:CDS | 40.0% | |
| GATCCTGGTTTAAGCTCTTT+AGG | + | chr1.3:19025145-19025164 | None:intergenic | 40.0% | |
| GCAATTAGACCAGGAAAGAA+AGG | - | chr1.3:19024773-19024792 | MS.gene061682:intron | 40.0% | |
| GGGAACATAAAGTAGGGTTA+GGG | + | chr1.3:19027599-19027618 | None:intergenic | 40.0% | |
| GTACCTGTTATTCAACCACT+TGG | - | chr1.3:19024361-19024380 | MS.gene061682:CDS | 40.0% | |
| GTACTCATCGTAGTCAGTTA+AGG | + | chr1.3:19027723-19027742 | None:intergenic | 40.0% | |
| GTATACCAAGGTAGGTAAAC+AGG | + | chr1.3:19026240-19026259 | None:intergenic | 40.0% | |
| GTGGCAGGTGTATAAAATCA+AGG | - | chr1.3:19026984-19027003 | MS.gene061682:CDS | 40.0% | |
| TAACAAGACCCTTTCTTTCC+TGG | + | chr1.3:19024785-19024804 | None:intergenic | 40.0% | |
| TATTCTGTCATGAATGTGGC+AGG | - | chr1.3:19026969-19026988 | MS.gene061682:intron | 40.0% | |
| TCAGGATTCACCCAAAAGTT+AGG | + | chr1.3:19025557-19025576 | None:intergenic | 40.0% | |
| TCTGAGAAACTCTTCAGTCT+TGG | + | chr1.3:19026595-19026614 | None:intergenic | 40.0% | |
| TGTAATCTCGCGGTCATTTA+TGG | + | chr1.3:19025388-19025407 | None:intergenic | 40.0% | |
| TTCCATTAACAAGGTGTGAC+TGG | - | chr1.3:19027891-19027910 | MS.gene061682:intron | 40.0% | |
| TTTCCTGGTCTAATTGCATG+TGG | + | chr1.3:19024770-19024789 | None:intergenic | 40.0% | |
| ! | ATTGTATGACTTGTGCAGCA+GGG | - | chr1.3:19026527-19026546 | MS.gene061682:intron | 40.0% |
| ! | GACAAAGCTTCTGGATTTTG+GGG | - | chr1.3:19025175-19025194 | MS.gene061682:intron | 40.0% |
| ! | GGTATTGAATGATCAAGAGG+AGG | + | chr1.3:19024268-19024287 | None:intergenic | 40.0% |
| ! | GTGAAGGAACTCCTAACTTT+TGG | - | chr1.3:19025543-19025562 | MS.gene061682:intron | 40.0% |
| ! | TATTGTATGACTTGTGCAGC+AGG | - | chr1.3:19026526-19026545 | MS.gene061682:intron | 40.0% |
| ! | TGAAGTACTTGCATCTCCAT+TGG | + | chr1.3:19028191-19028210 | None:intergenic | 40.0% |
| ! | TGGCAAAAGTTGTTTCAGAG+CGG | - | chr1.3:19027332-19027351 | MS.gene061682:CDS | 40.0% |
| ! | TTAACTTGAACAAGACGAGG+CGG | + | chr1.3:19025067-19025086 | None:intergenic | 40.0% |
| ! | TTTGAAGTGCCTTGTGATGA+AGG | + | chr1.3:19026000-19026019 | None:intergenic | 40.0% |
| !! | AACTTTTGGGTGAATCCTGA+TGG | - | chr1.3:19025557-19025576 | MS.gene061682:intron | 40.0% |
| !! | AGGAAATGTGTTGGTTGCAT+TGG | - | chr1.3:19024914-19024933 | MS.gene061682:intron | 40.0% |
| !! | AGGAGCATTATACAACAGCT+TGG | + | chr1.3:19026170-19026189 | None:intergenic | 40.0% |
| !! | TGTGTTGGTTGCATTGGTTA+TGG | - | chr1.3:19024920-19024939 | MS.gene061682:intron | 40.0% |
| AAGCCACATGCAATTAGACC+AGG | - | chr1.3:19024764-19024783 | MS.gene061682:CDS | 45.0% | |
| AGAGCTTCATCGATCGTATC+AGG | + | chr1.3:19028088-19028107 | None:intergenic | 45.0% | |
| AGCAACCTGTTTACCTACCT+TGG | - | chr1.3:19026232-19026251 | MS.gene061682:intron | 45.0% | |
| AGCTCTTCGATATGGTAGAG+AGG | - | chr1.3:19028102-19028121 | MS.gene061682:CDS | 45.0% | |
| AGTAGCATAGTGCATAGGGA+AGG | + | chr1.3:19027464-19027483 | None:intergenic | 45.0% | |
| ATCCAACAGCCTCACATCAA+TGG | - | chr1.3:19027109-19027128 | MS.gene061682:intron | 45.0% | |
| CCAACACATTTCCTTCCTTC+GGG | + | chr1.3:19024908-19024927 | None:intergenic | 45.0% | |
| CCACCTAAAGAGCTTAAACC+AGG | - | chr1.3:19025139-19025158 | MS.gene061682:intron | 45.0% | |
| CCTGGTTTAAGCTCTTTAGG+TGG | + | chr1.3:19025142-19025161 | None:intergenic | 45.0% | |
| CGATTCAGGCAACATACAAC+AGG | - | chr1.3:19026716-19026735 | MS.gene061682:intron | 45.0% | |
| GAAGAAGCTATGGATGCAAC+AGG | + | chr1.3:19024322-19024341 | None:intergenic | 45.0% | |
| GAGGGGCAAAAGAAAGATAG+GGG | - | chr1.3:19025593-19025612 | MS.gene061682:intron | 45.0% | |
| GGAGCATATATGAATGGACG+AGG | + | chr1.3:19026107-19026126 | None:intergenic | 45.0% | |
| GGGCTGATAATTTCACAAGG+TGG | + | chr1.3:19025306-19025325 | None:intergenic | 45.0% | |
| TACCTACCTTGGTATACTGC+TGG | - | chr1.3:19026243-19026262 | MS.gene061682:intron | 45.0% | |
| TACCTTGGTATACTGCTGGA+GGG | - | chr1.3:19026247-19026266 | MS.gene061682:intron | 45.0% | |
| TCCTTGGAGAAAACTGCAAG+TGG | - | chr1.3:19027654-19027673 | MS.gene061682:CDS | 45.0% | |
| TGGAGAAAACTGCAAGTGGT+TGG | - | chr1.3:19027658-19027677 | MS.gene061682:CDS | 45.0% | |
| TGGGGGCTGATAATTTCACA+AGG | + | chr1.3:19025309-19025328 | None:intergenic | 45.0% | |
| TGTAATTCGATTCAGGGTCG+CGG | + | chr1.3:19024694-19024713 | None:intergenic | 45.0% | |
| TTCCATTGATGTGAGGCTGT+TGG | + | chr1.3:19027114-19027133 | None:intergenic | 45.0% | |
| TTGCAGAGAAACGCAAGCAA+TGG | - | chr1.3:19025348-19025367 | MS.gene061682:CDS | 45.0% | |
| ! | ACCACTTGCAGTTTTCTCCA+AGG | + | chr1.3:19027658-19027677 | None:intergenic | 45.0% |
| ! | TTGTGCTATTCTGTCACTGC+CGG | - | chr1.3:19025919-19025938 | MS.gene061682:intron | 45.0% |
| !! | AGCTTCTGGATTTTGGGGAA+AGG | - | chr1.3:19025180-19025199 | MS.gene061682:intron | 45.0% |
| ACCTTGGTATACTGCTGGAG+GGG | - | chr1.3:19026248-19026267 | MS.gene061682:intron | 50.0% | |
| ACTTGTGCAGCAGGGAATTC+CGG | - | chr1.3:19026535-19026554 | MS.gene061682:intron | 50.0% | |
| AGTGCCTTGTGATGAAGGCT+TGG | + | chr1.3:19025995-19026014 | None:intergenic | 50.0% | |
| ATGGATCATACCGCGAAGAG+GGG | - | chr1.3:19025576-19025595 | MS.gene061682:intron | 50.0% | |
| CAGCTGCTATGCGCGAATAT+GGG | - | chr1.3:19026662-19026681 | MS.gene061682:intron | 50.0% | |
| CCCGAAGGAAGGAAATGTGT+TGG | - | chr1.3:19024905-19024924 | MS.gene061682:intron | 50.0% | |
| CTACCTTGGTATACTGCTGG+AGG | - | chr1.3:19026246-19026265 | MS.gene061682:intron | 50.0% | |
| CTCCACAAATCCTCCACCAT+TGG | + | chr1.3:19026688-19026707 | None:intergenic | 50.0% | |
| CTCCAGCAGTATACCAAGGT+AGG | + | chr1.3:19026248-19026267 | None:intergenic | 50.0% | |
| GACTCCTCTCTGCTTGACTT+AGG | + | chr1.3:19027146-19027165 | None:intergenic | 50.0% | |
| GATGAAGAGGACTCGTCAGA+AGG | + | chr1.3:19026322-19026341 | None:intergenic | 50.0% | |
| GATGGATCATACCGCGAAGA+GGG | - | chr1.3:19025575-19025594 | MS.gene061682:intron | 50.0% | |
| GGAGGATTTGTGGAGAGATG+AGG | - | chr1.3:19026693-19026712 | MS.gene061682:intron | 50.0% | |
| GTAGGAGACGTAGGCACAAT+TGG | - | chr1.3:19025779-19025798 | MS.gene061682:CDS | 50.0% | |
| TATGCGCGAATATGGGCCAA+TGG | - | chr1.3:19026669-19026688 | MS.gene061682:intron | 50.0% | |
| TCTGACGAGTCCTCTTCATC+TGG | - | chr1.3:19026322-19026341 | MS.gene061682:intron | 50.0% | |
| TCTTCGCGGTATGATCCATC+AGG | + | chr1.3:19025575-19025594 | None:intergenic | 50.0% | |
| ! | CTTTCTTTTGCCCCTCTTCG+CGG | + | chr1.3:19025589-19025608 | None:intergenic | 50.0% |
| ! | TGATGGATCATACCGCGAAG+AGG | - | chr1.3:19025574-19025593 | MS.gene061682:intron | 50.0% |
| !! | ATGGCAAGAGTGCCATGTGA+AGG | - | chr1.3:19025527-19025546 | MS.gene061682:intron | 50.0% |
| ATCAGCCCCCAGTTGAACGT+TGG | - | chr1.3:19025318-19025337 | MS.gene061682:CDS | 55.0% | |
| ATCAGGCTCAGGTTCGCGTT+CGG | - | chr1.3:19024571-19024590 | MS.gene061682:CDS | 55.0% | |
| CCAGCTGCTATGCGCGAATA+TGG | - | chr1.3:19026661-19026680 | MS.gene061682:intron | 55.0% | |
| CCATATTCGCGCATAGCAGC+TGG | + | chr1.3:19026664-19026683 | None:intergenic | 55.0% | |
| CGAATATGGGCCAATGGTGG+AGG | - | chr1.3:19026675-19026694 | MS.gene061682:intron | 55.0% | |
| CTACGTCTCCTACTGCAGAG+CGG | + | chr1.3:19025772-19025791 | None:intergenic | 55.0% | |
| GCAATGGGATCTATGCCCGA+AGG | - | chr1.3:19024890-19024909 | MS.gene061682:intron | 55.0% | |
| GTGGAGAGATGAGGCGATTC+AGG | - | chr1.3:19026702-19026721 | MS.gene061682:intron | 55.0% | |
| TAGGGGATGCATATGGGGCA+AGG | - | chr1.3:19025610-19025629 | MS.gene061682:intron | 55.0% | |
| TCGCGGAATGTTACCGCAGA+CGG | + | chr1.3:19024677-19024696 | None:intergenic | 55.0% | |
| TGGGATCTATGCCCGAAGGA+AGG | - | chr1.3:19024894-19024913 | MS.gene061682:intron | 55.0% | |
| ! | GGCCAATGGTGGAGGATTTG+TGG | - | chr1.3:19026683-19026702 | MS.gene061682:intron | 55.0% |
| AGCCCCCAGTTGAACGTTGG+CGG | - | chr1.3:19025321-19025340 | MS.gene061682:CDS | 60.0% | |
| AGCGACCGCCAACGTTCAAC+TGG | + | chr1.3:19025329-19025348 | None:intergenic | 60.0% | |
| AGGGAAGGTCGCTCGAGTAC+AGG | + | chr1.3:19027449-19027468 | None:intergenic | 60.0% | |
| CACTGTAGCCGCTCTGCAGT+AGG | - | chr1.3:19025761-19025780 | MS.gene061682:CDS | 60.0% | |
| CGACCGCCAACGTTCAACTG+GGG | + | chr1.3:19025327-19025346 | None:intergenic | 60.0% | |
| CGCTCTGCAGTAGGAGACGT+AGG | - | chr1.3:19025770-19025789 | MS.gene061682:CDS | 60.0% | |
| GACCGCCAACGTTCAACTGG+GGG | + | chr1.3:19025326-19025345 | None:intergenic | 60.0% | |
| GCCCCTCCAGCAGTATACCA+AGG | + | chr1.3:19026252-19026271 | None:intergenic | 60.0% | |
| GCGACCGCCAACGTTCAACT+GGG | + | chr1.3:19025328-19025347 | None:intergenic | 60.0% | |
| GCGCGAATATGGGCCAATGG+TGG | - | chr1.3:19026672-19026691 | MS.gene061682:intron | 60.0% | |
| GGAAGGTCGCTCGAGTACAG+GGG | + | chr1.3:19027447-19027466 | None:intergenic | 60.0% | |
| GGGAAGGTCGCTCGAGTACA+GGG | + | chr1.3:19027448-19027467 | None:intergenic | 60.0% | |
| TCAGGCTCAGGTTCGCGTTC+GGG | - | chr1.3:19024572-19024591 | MS.gene061682:CDS | 60.0% | |
| ! | TATACTGCTGGAGGGGCGCG+AGG | - | chr1.3:19026255-19026274 | MS.gene061682:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 19024202 | 19028213 | 19024202 | ID=MS.gene061682 |
| chr1.3 | mRNA | 19024202 | 19028213 | 19024202 | ID=MS.gene061682.t1;Parent=MS.gene061682 |
| chr1.3 | exon | 19028033 | 19028213 | 19028033 | ID=MS.gene061682.t1.exon1;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19028033 | 19028213 | 19028033 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19027214 | 19027845 | 19027214 | ID=MS.gene061682.t1.exon2;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19027214 | 19027845 | 19027214 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19026984 | 19027121 | 19026984 | ID=MS.gene061682.t1.exon3;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19026984 | 19027121 | 19026984 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19026784 | 19026888 | 19026784 | ID=MS.gene061682.t1.exon4;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19026784 | 19026888 | 19026784 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19026343 | 19026513 | 19026343 | ID=MS.gene061682.t1.exon5;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19026343 | 19026513 | 19026343 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19026072 | 19026249 | 19026072 | ID=MS.gene061682.t1.exon6;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19026072 | 19026249 | 19026072 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19025626 | 19025870 | 19025626 | ID=MS.gene061682.t1.exon7;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19025626 | 19025870 | 19025626 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19025214 | 19025377 | 19025214 | ID=MS.gene061682.t1.exon8;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19025214 | 19025377 | 19025214 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| chr1.3 | exon | 19024202 | 19024790 | 19024202 | ID=MS.gene061682.t1.exon9;Parent=MS.gene061682.t1 |
| chr1.3 | CDS | 19024202 | 19024790 | 19024202 | ID=cds.MS.gene061682.t1;Parent=MS.gene061682.t1 |
| Gene Sequence |
| Protein sequence |
