AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061459

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061459.t1 MTR_6g087040 97.647 510 12 0 1 510 1 510 0.0 1018
MS.gene061459.t1 MTR_6g088375 97.647 510 12 0 1 510 1 510 0.0 1018
MS.gene061459.t1 MTR_8g102860 76.660 497 113 1 13 506 13 509 0.0 791
MS.gene061459.t1 MTR_8g102860 76.368 457 105 1 53 506 1 457 0.0 720
MS.gene061459.t1 MTR_0204s0020 58.215 493 202 3 8 499 3 492 0.0 613
MS.gene061459.t1 MTR_0204s0020 57.809 493 201 4 8 499 3 489 0.0 603
MS.gene061459.t1 MTR_7g091690 58.683 501 202 4 1 499 1 498 0.0 599
MS.gene061459.t1 MTR_5g094760 57.115 506 212 4 1 504 1 503 0.0 595
MS.gene061459.t1 MTR_0204s0040 55.624 489 215 2 14 502 17 503 0.0 588
MS.gene061459.t1 MTR_4g116770 55.624 489 215 2 14 502 213 699 0.0 587
MS.gene061459.t1 MTR_4g116790 55.200 500 220 3 3 502 6 501 0.0 576
MS.gene061459.t1 MTR_5g006070 57.317 492 203 6 18 504 14 503 0.0 564
MS.gene061459.t1 MTR_3g008160 53.347 493 227 3 18 508 15 506 0.0 530
MS.gene061459.t1 MTR_1g038630 52.756 508 232 5 1 505 1 503 0.0 523
MS.gene061459.t1 MTR_5g006070 56.674 457 191 6 53 504 1 455 0.0 518
MS.gene061459.t1 MTR_1g104780 53.360 506 227 6 1 502 1 501 1.82e-177 509
MS.gene061459.t1 MTR_1g104750 50.400 500 241 5 1 497 1 496 4.22e-177 507
MS.gene061459.t1 MTR_5g082540 52.361 487 227 4 18 501 15 499 3.36e-176 506
MS.gene061459.t1 MTR_0009s0370 52.439 492 228 4 18 504 13 503 7.54e-176 504
MS.gene061459.t1 MTR_1g104770 50.299 501 241 6 1 497 1 497 8.99e-175 501
MS.gene061459.t1 MTR_3g093010 52.437 513 231 7 1 505 1 508 4.02e-174 500
MS.gene061459.t1 MTR_5g041550 51.845 515 237 6 1 509 1 510 8.36e-174 499
MS.gene061459.t1 MTR_3g023480 51.710 497 230 5 15 504 10 503 1.69e-173 499
MS.gene061459.t1 MTR_4g091370 53.024 496 228 3 18 509 15 509 2.31e-171 493
MS.gene061459.t1 MTR_3g008160 53.057 458 212 3 53 508 1 457 1.25e-169 487
MS.gene061459.t1 MTR_3g008170 50.101 493 238 5 21 506 18 509 1.33e-169 489
MS.gene061459.t1 MTR_1g038600 49.901 507 230 6 1 505 1 485 2.29e-166 480
MS.gene061459.t1 MTR_3g007910 48.444 514 225 7 1 510 1 478 2.72e-160 464
MS.gene061459.t1 MTR_4g090600 52.941 493 227 4 18 506 15 506 6.42e-160 464
MS.gene061459.t1 MTR_3g074390 46.955 509 261 8 1 503 1 506 2.19e-159 463
MS.gene061459.t1 MTR_3g074410 45.365 507 269 8 1 503 1 503 1.21e-157 458
MS.gene061459.t1 MTR_3g074270 47.012 502 239 7 1 500 1 477 4.48e-156 453
MS.gene061459.t1 MTR_4g116790 55.220 364 159 3 3 366 6 365 9.68e-150 433
MS.gene061459.t1 MTR_3g093060 49.666 449 219 4 53 495 1 448 4.96e-146 427
MS.gene061459.t1 MTR_3g074380 46.612 369 192 5 1 367 1 366 2.64e-110 332
MS.gene061459.t1 MTR_3g074370 42.405 316 176 6 191 502 20 333 8.34e-88 273
MS.gene061459.t1 MTR_3g074340 42.089 316 177 6 191 502 20 333 1.31e-87 273
MS.gene061459.t1 MTR_3g074320 42.089 316 177 6 191 502 20 333 2.87e-87 272
MS.gene061459.t1 MTR_3g074400 36.044 455 232 11 53 483 1 420 1.33e-76 247
MS.gene061459.t1 MTR_6g088450 26.722 479 309 12 13 478 50 499 3.77e-53 187
MS.gene061459.t1 MTR_8g103500 26.295 502 336 11 21 510 13 492 7.03e-53 186
MS.gene061459.t1 MTR_4g072030 28.310 491 302 13 28 493 26 491 1.86e-50 181
MS.gene061459.t1 MTR_7g005910 30.000 480 305 12 25 497 32 487 5.41e-49 176
MS.gene061459.t1 MTR_7g446340 27.406 478 311 12 25 492 54 505 8.06e-48 174
MS.gene061459.t1 MTR_6g007340 27.406 478 311 12 25 492 54 505 8.06e-48 174
MS.gene061459.t1 MTR_1g116660 29.303 488 314 14 25 504 34 498 8.80e-48 173
MS.gene061459.t1 MTR_1g116650 30.913 482 286 12 25 497 77 520 1.95e-47 172
MS.gene061459.t1 MTR_3g084110 28.515 505 320 14 16 508 13 488 2.61e-47 171
MS.gene061459.t1 MTR_6g018790 29.512 471 298 11 19 485 98 538 4.95e-47 172
MS.gene061459.t1 MTR_5g096000 48.663 187 73 2 1 187 1 164 6.05e-47 166
MS.gene061459.t1 MTR_5g096000 49.254 134 68 0 377 510 176 309 2.11e-32 126
MS.gene061459.t1 MTR_4g077740 29.237 472 286 11 34 485 53 496 9.26e-47 170
MS.gene061459.t1 MTR_3g116240 27.536 483 301 11 28 485 29 487 1.03e-46 170
MS.gene061459.t1 MTR_2g013310 25.934 482 323 10 19 491 46 502 2.47e-46 169
MS.gene061459.t1 MTR_4g069500 24.748 497 333 9 28 504 31 506 3.00e-46 169
MS.gene061459.t1 MTR_5g075300 27.088 491 314 9 21 489 14 482 1.17e-45 167
MS.gene061459.t1 MTR_4g069500 26.392 413 284 6 111 504 45 456 1.61e-45 166
MS.gene061459.t1 MTR_8g077890 28.904 429 281 7 92 498 65 491 2.20e-45 166
MS.gene061459.t1 MTR_7g082270 27.692 455 301 8 32 485 71 498 9.73e-45 164
MS.gene061459.t1 MTR_2g013310 28.462 390 265 8 111 491 45 429 1.09e-44 163
MS.gene061459.t1 MTR_6g087910 29.288 379 251 6 111 485 117 482 2.31e-41 155
MS.gene061459.t1 MTR_4g013205 29.024 379 252 7 111 485 103 468 2.47e-41 155
MS.gene061459.t1 MTR_7g082270 28.715 397 256 7 32 428 71 440 3.91e-41 154
MS.gene061459.t1 MTR_5g077580 26.268 552 280 16 35 492 35 553 2.17e-40 154
MS.gene061459.t1 MTR_1g022315 27.317 410 284 7 86 490 89 489 1.83e-39 150
MS.gene061459.t1 MTR_3g074330 50.000 162 70 3 1 155 1 158 3.47e-39 140
MS.gene061459.t1 MTR_3g074360 50.000 162 70 3 1 155 1 158 3.47e-39 140
MS.gene061459.t1 MTR_2g026160 31.977 344 199 9 25 355 26 347 7.65e-39 149
MS.gene061459.t1 MTR_1g022315 27.068 399 277 7 97 490 1 390 8.37e-39 145
MS.gene061459.t1 MTR_8g077310 26.395 466 306 10 26 485 47 481 1.60e-38 147
MS.gene061459.t1 MTR_3g074310 49.383 162 71 3 1 155 1 158 1.75e-38 139
MS.gene061459.t1 MTR_3g080240 28.535 396 266 10 95 485 144 527 2.46e-38 147
MS.gene061459.t1 MTR_8g077310 27.089 395 271 8 97 485 1 384 8.22e-38 143
MS.gene061459.t1 MTR_5g020270 27.494 411 281 8 86 490 90 489 8.91e-38 145
MS.gene061459.t1 MTR_2g048720 31.065 338 204 7 35 365 35 350 1.10e-37 146
MS.gene061459.t1 MTR_7g113960 29.829 409 257 12 86 485 67 454 3.74e-37 143
MS.gene061459.t1 MTR_5g020270 27.250 400 274 8 97 490 1 389 4.06e-37 141
MS.gene061459.t1 MTR_2g049020 28.986 345 217 7 35 371 35 359 1.40e-36 143
MS.gene061459.t1 MTR_8g077300 26.439 469 304 11 25 485 38 473 1.69e-36 141
MS.gene061459.t1 MTR_1g038620 42.767 159 73 2 206 364 50 190 9.48e-36 132
MS.gene061459.t1 MTR_7g113970 29.710 414 253 12 86 485 102 491 1.77e-35 139
MS.gene061459.t1 MTR_7g094450 26.355 406 277 6 86 485 80 469 2.88e-35 137
MS.gene061459.t1 MTR_5g019870 27.373 453 291 9 81 509 50 488 3.76e-35 137
MS.gene061459.t1 MTR_4g118610 29.412 408 263 10 86 485 92 482 3.19e-33 132
MS.gene061459.t1 MTR_5g020270 26.683 416 257 9 86 490 90 468 1.37e-32 130
MS.gene061459.t1 MTR_0064s0040 43.478 138 66 1 18 155 16 141 4.63e-31 118
MS.gene061459.t1 MTR_7g094110 26.353 425 283 10 67 485 71 471 4.79e-31 125
MS.gene061459.t1 MTR_4g064820 28.184 369 226 9 26 376 96 443 2.04e-29 121
MS.gene061459.t1 MTR_2g020710 27.094 406 273 9 87 485 1 390 3.83e-29 119
MS.gene061459.t1 MTR_2g020710 27.451 408 271 10 86 485 89 479 4.65e-29 120
MS.gene061459.t1 MTR_2g026140 29.129 333 189 10 36 355 34 332 2.85e-28 119
MS.gene061459.t1 MTR_8g077310 28.472 288 193 6 86 370 87 364 1.75e-27 114
MS.gene061459.t1 MTR_4g069500 23.585 318 224 5 205 504 1 317 2.10e-26 110
MS.gene061459.t1 MTR_7g113960 30.935 278 168 9 86 355 67 328 3.19e-26 110
MS.gene061459.t1 MTR_7g094110 24.722 449 282 11 42 485 54 451 1.30e-24 107
MS.gene061459.t1 MTR_3g116060 32.308 195 121 3 77 263 31 222 4.52e-22 100
MS.gene061459.t1 MTR_3g116060 27.686 242 155 6 260 489 484 717 1.97e-12 70.1
MS.gene061459.t1 MTR_7g113970 28.060 335 206 11 86 406 102 415 6.15e-22 98.6
MS.gene061459.t1 MTR_4g118610 28.614 339 217 10 86 416 92 413 1.17e-21 97.8
MS.gene061459.t1 MTR_8g073100 27.966 236 157 4 79 306 39 269 7.45e-21 96.7
MS.gene061459.t1 MTR_8g073100 28.444 225 141 6 278 489 488 705 6.11e-11 65.5
MS.gene061459.t1 MTR_5g024740 28.033 239 151 4 26 262 4 223 1.50e-20 95.9
MS.gene061459.t1 MTR_5g044910 30.508 177 122 1 87 262 47 223 4.75e-20 94.4
MS.gene061459.t1 MTR_2g020710 26.113 337 226 9 86 415 89 409 2.38e-19 90.9
MS.gene061459.t1 MTR_1g114280 35.065 154 79 3 350 501 21 155 2.42e-19 85.5
MS.gene061459.t1 MTR_2g020710 26.549 339 224 10 86 416 89 410 2.45e-19 90.9
MS.gene061459.t1 MTR_3g118530 32.941 170 113 1 95 263 55 224 4.31e-19 91.3
MS.gene061459.t1 MTR_2g020710 28.571 273 174 8 86 351 89 347 5.91e-19 89.0
MS.gene061459.t1 MTR_3g118530 32.941 170 113 1 95 263 55 224 9.25e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061459.t1 AT1G77210 71.032 504 146 0 1 504 1 504 0.0 759
MS.gene061459.t1 AT1G77210 71.032 504 146 0 1 504 1 504 0.0 759
MS.gene061459.t1 AT4G02050 59.163 502 202 3 1 501 1 500 0.0 625
MS.gene061459.t1 AT4G02050 59.163 502 202 3 1 501 1 500 0.0 625
MS.gene061459.t1 AT5G26340 56.693 508 212 6 1 504 1 504 0.0 567
MS.gene061459.t1 AT3G19940 51.389 504 241 3 1 502 1 502 0.0 536
MS.gene061459.t1 AT1G50310 51.485 505 240 4 1 502 1 503 0.0 526
MS.gene061459.t1 AT1G11260 52.827 513 234 5 1 509 1 509 0.0 524
MS.gene061459.t1 AT1G77210 69.143 350 108 0 155 504 6 355 0.0 516
MS.gene061459.t1 AT5G23270 53.507 499 225 6 1 495 1 496 1.92e-178 511
MS.gene061459.t1 AT3G19930 51.089 505 239 5 1 502 1 500 2.98e-177 508
MS.gene061459.t1 AT3G19930 51.089 505 239 5 1 502 1 500 2.98e-177 508
MS.gene061459.t1 AT4G21480 53.909 486 219 4 18 500 15 498 2.46e-174 501
MS.gene061459.t1 AT5G26250 48.875 489 245 4 18 504 14 499 1.45e-164 476
MS.gene061459.t1 AT3G05960 47.284 497 259 3 14 509 9 503 5.16e-163 472
MS.gene061459.t1 AT5G61520 46.217 489 255 4 21 503 19 505 8.16e-156 454
MS.gene061459.t1 AT1G34580 44.618 511 269 8 1 503 1 505 2.45e-148 434
MS.gene061459.t1 AT1G07340 46.201 487 256 6 18 501 15 498 2.03e-147 432
MS.gene061459.t1 AT5G61520 45.415 458 242 4 52 503 2 457 1.56e-140 413
MS.gene061459.t1 AT1G34580 44.444 459 243 7 53 503 1 455 5.48e-133 394
MS.gene061459.t1 AT1G50310 49.858 351 172 3 155 502 11 360 1.11e-120 359
MS.gene061459.t1 AT2G16130 29.569 487 300 9 28 492 27 492 5.89e-57 198
MS.gene061459.t1 AT2G16120 28.953 487 303 9 28 492 27 492 8.56e-56 195
MS.gene061459.t1 AT4G36670 29.839 496 300 11 30 503 21 490 2.94e-54 190
MS.gene061459.t1 AT2G18480 30.998 471 281 12 40 489 36 483 5.64e-54 190
MS.gene061459.t1 AT3G18830 27.833 503 319 12 28 509 37 516 6.10e-54 190
MS.gene061459.t1 AT5G59250 29.586 507 307 14 3 485 72 552 3.62e-46 169
MS.gene061459.t1 AT4G16480 28.376 585 295 19 23 510 24 581 7.10e-46 169
MS.gene061459.t1 AT4G16480 28.376 585 295 19 23 510 24 581 7.10e-46 169
MS.gene061459.t1 AT4G16480 28.376 585 295 19 23 510 24 581 7.10e-46 169
MS.gene061459.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.40e-45 167
MS.gene061459.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.40e-45 167
MS.gene061459.t1 AT5G17010 28.221 489 313 9 12 485 33 498 1.40e-45 167
MS.gene061459.t1 AT5G16150 28.330 473 305 9 19 487 98 540 7.06e-45 166
MS.gene061459.t1 AT5G16150 28.330 473 305 9 19 487 98 540 7.06e-45 166
MS.gene061459.t1 AT5G16150 28.330 473 305 9 19 487 98 540 7.06e-45 166
MS.gene061459.t1 AT2G20780 27.912 498 315 16 13 497 42 508 1.04e-43 162
MS.gene061459.t1 AT2G43330 29.079 478 304 10 25 492 30 482 2.78e-43 160
MS.gene061459.t1 AT2G20780 30.238 420 269 14 91 497 42 450 1.31e-41 155
MS.gene061459.t1 AT1G08930 29.138 429 250 13 86 492 98 494 1.66e-41 155
MS.gene061459.t1 AT1G08930 29.138 429 250 13 86 492 98 494 1.66e-41 155
MS.gene061459.t1 AT3G03090 28.138 494 307 10 12 485 33 498 4.69e-41 154
MS.gene061459.t1 AT1G05030 30.340 412 269 11 82 487 64 463 1.77e-40 152
MS.gene061459.t1 AT1G05030 29.004 462 291 13 32 487 85 515 1.92e-40 153
MS.gene061459.t1 AT1G75220 28.117 409 281 6 86 490 88 487 3.56e-40 152
MS.gene061459.t1 AT2G48020 28.256 407 268 7 86 485 68 457 1.34e-39 149
MS.gene061459.t1 AT2G48020 28.256 407 268 7 86 485 68 457 1.34e-39 149
MS.gene061459.t1 AT1G19450 28.606 409 279 6 86 490 89 488 1.55e-39 150
MS.gene061459.t1 AT1G08900 28.642 405 269 8 86 485 23 412 1.47e-38 146
MS.gene061459.t1 AT3G05400 28.979 421 259 13 86 491 66 461 1.50e-38 147
MS.gene061459.t1 AT1G08900 28.642 405 269 8 86 485 57 446 2.99e-38 145
MS.gene061459.t1 AT1G08900 28.642 405 269 8 86 485 65 454 3.05e-38 146
MS.gene061459.t1 AT1G08900 28.642 405 269 8 86 485 65 454 3.05e-38 146
MS.gene061459.t1 AT1G67300 27.559 381 258 7 111 485 118 486 1.50e-37 144
MS.gene061459.t1 AT5G27360 28.364 483 284 13 19 485 28 464 3.02e-37 143
MS.gene061459.t1 AT1G67300 27.647 340 232 6 111 448 118 445 4.65e-37 142
MS.gene061459.t1 AT1G67300 27.647 340 232 6 111 448 118 445 4.65e-37 142
MS.gene061459.t1 AT1G79820 26.862 376 264 5 111 485 121 486 6.60e-37 142
MS.gene061459.t1 AT1G79820 26.862 376 264 5 111 485 121 486 6.60e-37 142
MS.gene061459.t1 AT5G27360 28.364 483 284 13 19 485 76 512 7.91e-37 143
MS.gene061459.t1 AT1G30220 29.775 356 223 9 7 355 10 345 7.97e-37 144
MS.gene061459.t1 AT5G27350 27.551 490 279 12 19 485 24 460 8.04e-37 142
MS.gene061459.t1 AT3G05400 30.750 400 227 15 117 491 67 441 1.02e-36 141
MS.gene061459.t1 AT3G05155 26.650 409 270 9 86 485 67 454 1.22e-36 141
MS.gene061459.t1 AT1G67300 27.559 381 257 7 111 485 118 485 1.63e-36 141
MS.gene061459.t1 AT1G67300 27.559 381 257 7 111 485 118 485 1.63e-36 141
MS.gene061459.t1 AT1G54730 27.475 404 275 8 86 485 72 461 1.98e-36 141
MS.gene061459.t1 AT4G04760 30.184 434 270 10 68 492 2 411 2.02e-36 140
MS.gene061459.t1 AT4G04750 29.016 386 258 8 111 492 145 518 3.62e-36 141
MS.gene061459.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.23e-36 140
MS.gene061459.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.23e-36 140
MS.gene061459.t1 AT3G05150 28.256 407 269 8 86 485 75 465 6.29e-36 140
MS.gene061459.t1 AT3G05150 28.256 407 269 8 86 485 75 465 7.04e-36 139
MS.gene061459.t1 AT3G05150 28.256 407 269 8 86 485 75 465 7.04e-36 139
MS.gene061459.t1 AT4G04760 30.184 434 270 10 68 492 61 470 7.22e-36 139
MS.gene061459.t1 AT1G08890 29.238 407 264 10 86 485 67 456 1.43e-35 138
MS.gene061459.t1 AT1G67300 27.586 319 219 5 111 427 118 426 2.10e-35 137
MS.gene061459.t1 AT1G67300 27.586 319 219 5 111 427 118 426 2.10e-35 137
MS.gene061459.t1 AT5G18840 29.657 408 262 10 86 485 84 474 3.59e-35 137
MS.gene061459.t1 AT1G79820 26.769 325 228 4 111 435 121 435 3.90e-35 137
MS.gene061459.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.18e-35 135
MS.gene061459.t1 AT5G27360 29.363 361 233 8 131 485 16 360 4.18e-35 135
MS.gene061459.t1 AT2G35740 27.763 371 227 9 25 381 25 368 5.20e-35 138
MS.gene061459.t1 AT3G05160 28.780 410 258 12 88 485 14 401 4.16e-34 133
MS.gene061459.t1 AT3G05160 28.780 410 258 12 88 485 14 401 4.16e-34 133
MS.gene061459.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.33e-34 134
MS.gene061459.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.33e-34 134
MS.gene061459.t1 AT3G05165 29.156 391 235 12 111 485 95 459 6.33e-34 134
MS.gene061459.t1 AT3G05160 28.780 410 258 12 88 485 63 450 8.35e-34 133
MS.gene061459.t1 AT1G08900 29.444 360 234 8 86 440 65 409 1.45e-32 129
MS.gene061459.t1 AT1G08920 26.214 412 270 10 86 485 72 461 2.02e-32 129
MS.gene061459.t1 AT4G04760 29.561 433 269 11 68 491 61 466 3.52e-32 129
MS.gene061459.t1 AT1G54730 26.667 360 246 8 86 441 72 417 1.80e-31 126
MS.gene061459.t1 AT1G08920 25.776 419 270 10 86 485 72 468 2.26e-31 127
MS.gene061459.t1 AT1G54730 25.743 404 261 8 86 485 72 440 1.39e-29 121
MS.gene061459.t1 AT3G20460 27.670 412 264 11 86 485 93 482 1.64e-28 119
MS.gene061459.t1 AT3G05165 29.552 335 194 12 111 429 95 403 2.77e-28 118
MS.gene061459.t1 AT3G05165 29.552 335 194 12 111 429 95 403 4.71e-28 117
MS.gene061459.t1 AT3G05165 29.552 335 194 12 111 429 95 403 4.71e-28 117
MS.gene061459.t1 AT1G08920 25.815 368 239 10 86 441 72 417 1.71e-27 115
MS.gene061459.t1 AT2G48020 29.066 289 184 6 86 367 68 342 1.28e-26 111
MS.gene061459.t1 AT3G51490 30.126 239 148 5 26 263 4 224 4.27e-25 109
MS.gene061459.t1 AT3G51490 30.126 239 148 5 26 263 4 224 4.44e-25 109
MS.gene061459.t1 AT1G54730 25.970 335 230 8 86 416 72 392 4.54e-25 107
MS.gene061459.t1 AT1G54730 25.970 335 230 8 86 416 72 392 4.54e-25 107
MS.gene061459.t1 AT3G51490 35.057 174 111 2 91 263 2 174 4.81e-25 109
MS.gene061459.t1 AT1G54730 24.722 360 232 8 86 441 72 396 1.01e-24 106
MS.gene061459.t1 AT3G05155 26.619 278 177 7 86 355 67 325 1.86e-24 104
MS.gene061459.t1 AT2G48020 29.286 280 170 6 86 355 68 329 1.90e-24 105
MS.gene061459.t1 AT1G79820 24.468 376 225 5 111 485 121 438 3.60e-24 105
MS.gene061459.t1 AT1G54730 26.374 273 187 5 86 355 72 333 9.75e-24 102
MS.gene061459.t1 AT5G27360 26.905 420 245 13 19 422 28 401 1.06e-23 103
MS.gene061459.t1 AT5G17010 24.540 489 271 13 12 485 30 435 4.11e-22 99.4
MS.gene061459.t1 AT1G79820 24.862 362 209 6 127 485 75 376 2.06e-21 96.7
MS.gene061459.t1 AT1G54730 25.896 251 175 4 86 333 72 314 3.57e-21 95.1
MS.gene061459.t1 AT1G54730 25.896 251 175 4 86 333 72 314 3.57e-21 95.1
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 8.17e-21 96.7
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.48e-21 96.3
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.48e-21 96.3
MS.gene061459.t1 AT4G35300 34.483 174 112 2 91 263 52 224 9.48e-21 96.3
MS.gene061459.t1 AT1G54730 25.498 251 176 4 86 333 72 314 2.19e-20 93.6
MS.gene061459.t1 AT1G20840 30.208 192 126 2 80 263 31 222 5.10e-19 90.9
MS.gene061459.t1 AT1G20840 30.208 192 126 2 80 263 31 222 5.10e-19 90.9

Find 105 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAACTTGCTTGGTTTC+TGG 0.107517 6.1:-77595516 None:intergenic
GGATATGATCTTGGTGTTTC+AGG 0.205684 6.1:+77592694 MS.gene061459:CDS
GCACTTGGTGGGGCTCTATT+TGG 0.217992 6.1:+77592673 MS.gene061459:CDS
ACGAGACTGTTTGGTGTTTC+TGG 0.219245 6.1:-77594333 None:intergenic
TCTTTCTCAAAAGGAGATTC+TGG 0.236300 6.1:-77594482 None:intergenic
CTTGGAGTTGGTATTGGATT+TGG 0.262672 6.1:+77593204 MS.gene061459:CDS
TTCCTAAACATGTTGTTAAC+TGG 0.274361 6.1:-77594191 None:intergenic
ATTGCTAACCTTGTGAATTA+TGG 0.277757 6.1:+77594219 MS.gene061459:CDS
ATCATTGGACGTATTCTTCT+TGG 0.284861 6.1:+77593186 MS.gene061459:CDS
GATCAACATTGCAATATTCT+TGG 0.286759 6.1:-77593166 None:intergenic
TGCTTCCTCTCATACACATT+TGG 0.294387 6.1:-77592952 None:intergenic
CCAATTGTTTGGAAAATAAC+AGG 0.316014 6.1:-77594588 None:intergenic
GATTGCCACTGCTATAGTTT+TGG 0.321689 6.1:+77595188 MS.gene061459:intron
TCACTTTGCCACCTCAAATA+TGG 0.329819 6.1:+77595432 MS.gene061459:CDS
GCTGCTCTTGTGTCCACATT+TGG 0.331542 6.1:+77593051 MS.gene061459:CDS
ATCTTCTGTTTGAGAATCAT+TGG 0.334480 6.1:+77595550 MS.gene061459:CDS
TGTTTGAGAATCATTGGTTT+TGG 0.335335 6.1:+77595556 MS.gene061459:CDS
TACACTCATCTCAATGGCTT+TGG 0.339050 6.1:+77594671 MS.gene061459:CDS
GCTCTATTTGGATATGATCT+TGG 0.350131 6.1:+77592685 MS.gene061459:CDS
CTTTATGAGCATAAGATAAC+TGG 0.354982 6.1:+77592622 MS.gene061459:CDS
GCAGATGACCTTATCTCTAA+TGG 0.355097 6.1:-77595345 None:intergenic
CCAGCATTTCAACAACTAAC+TGG 0.358134 6.1:+77594540 MS.gene061459:CDS
GAAGATCTTGGGGTCCCTTA+GGG 0.359127 6.1:+77595298 MS.gene061459:CDS
CCTTGTTCCACGAGACTGTT+TGG 0.359246 6.1:-77594342 None:intergenic
ATGGCTTTGGTTGACAAGTT+TGG 0.363390 6.1:+77594684 MS.gene061459:CDS
GGAAGATCTTGGGGTCCCTT+AGG 0.366556 6.1:+77595297 MS.gene061459:CDS
TTCCAGTTAACAACATGTTT+AGG 0.367924 6.1:+77594189 MS.gene061459:CDS
TTGGGGTCCCTTAGGGTGGT+TGG 0.373657 6.1:+77595305 MS.gene061459:CDS
ATTCTTCTTGGAGTTGGTAT+TGG 0.373658 6.1:+77593198 MS.gene061459:CDS
CAGAGCCGAATCCAATTGTT+TGG 0.378651 6.1:-77594599 None:intergenic
AATATTGCAATGTTGATCAT+TGG 0.379526 6.1:+77593171 MS.gene061459:CDS
CTACTCTTCCTTCGTCGATT+CGG 0.381130 6.1:-77594365 None:intergenic
TCCTCTATATCTTTCAGAAA+TGG 0.385342 6.1:+77594131 MS.gene061459:CDS
CTCTTCAATTGGAACTTGCT+TGG 0.389604 6.1:-77595523 None:intergenic
GAGGTCTATTCTTTCTCAAA+AGG 0.398721 6.1:-77594491 None:intergenic
CAAACAATTGGATTCGGCTC+TGG 0.401326 6.1:+77594600 MS.gene061459:CDS
GCTTCCTCTCATACACATTT+GGG 0.404907 6.1:-77592951 None:intergenic
GCATTATTGGAGCACTTGGT+GGG 0.409674 6.1:+77592662 MS.gene061459:CDS
TGCATTATTGGAGCACTTGG+TGG 0.411658 6.1:+77592661 MS.gene061459:CDS
AGAAGATAAATCTCTTCAAT+TGG 0.412850 6.1:-77595534 None:intergenic
GATGGAAAACAACTGTCATT+TGG 0.414524 6.1:+77595225 MS.gene061459:CDS
CCGATGAACATGAATGTTGC+TGG 0.414552 6.1:-77594297 None:intergenic
AGTAGACAAAGCAGCTCATA+AGG 0.415528 6.1:-77595485 None:intergenic
TGGGGATGGAGGTTATCCTT+AGG 0.415708 6.1:+77594261 MS.gene061459:CDS
TTTGGCATATGGAAGATCTT+GGG 0.420424 6.1:+77595287 MS.gene061459:CDS
GTAGTGTTGGAAAAGATTAG+AGG 0.423770 6.1:+77594384 MS.gene061459:CDS
CTTGCTTGGTTTCTGGCAAT+AGG 0.429274 6.1:-77595509 None:intergenic
TACTGAGAAAATTCACCCTT+GGG 0.434323 6.1:+77594242 MS.gene061459:CDS
CCAGTTAGTTGTTGAAATGC+TGG 0.437664 6.1:-77594540 None:intergenic
AACTCTTTCCATTAGAGATA+AGG 0.443050 6.1:+77595337 MS.gene061459:CDS
GGACGTATTCTTCTTGGAGT+TGG 0.452238 6.1:+77593192 MS.gene061459:CDS
AGGAGAGCTAGTATCTTAGT+TGG 0.456742 6.1:+77593102 MS.gene061459:CDS
TCTTGCATTATTGGAGCACT+TGG 0.467413 6.1:+77592658 MS.gene061459:CDS
GCCATTTCTGAAAGATATAG+AGG 0.470895 6.1:-77594132 None:intergenic
AATAGACCTCAATTCATCAT+TGG 0.473706 6.1:+77594504 MS.gene061459:CDS
TCTTGCTACACTCATCTCAA+TGG 0.483416 6.1:+77594665 MS.gene061459:CDS
GCAAGAAGATACCATATTTG+AGG 0.490123 6.1:-77595443 None:intergenic
AGAAAATTCACCCTTGGGGA+TGG 0.501248 6.1:+77594247 MS.gene061459:CDS
AGAATTTGATGATCTTATTG+AGG 0.508732 6.1:+77594425 MS.gene061459:CDS
ATAAAGATGAGCCCTCTTGA+GGG 0.508927 6.1:-77592605 None:intergenic
GATCTTGGGGTCCCTTAGGG+TGG 0.511703 6.1:+77595301 MS.gene061459:CDS
TTGGCATATGGAAGATCTTG+GGG 0.514199 6.1:+77595288 MS.gene061459:CDS
CTCAAAAGGAGATTCTGGAA+TGG 0.515001 6.1:-77594477 None:intergenic
CATTATTGGAGCACTTGGTG+GGG 0.519682 6.1:+77592663 MS.gene061459:CDS
TTTAGCTTATGCTTGTGTCT+CGG 0.537950 6.1:-77595610 None:intergenic
AAAAGTTAGGGTAAAATGGC+AGG 0.538950 6.1:+77592559 None:intergenic
CCAGCAACATTCATGTTCAT+CGG 0.541413 6.1:+77594297 MS.gene061459:CDS
CATAAAGATGAGCCCTCTTG+AGG 0.543236 6.1:-77592606 None:intergenic
CTTTGGTTGACAAGTTTGGT+AGG 0.544568 6.1:+77594688 MS.gene061459:CDS
GTACTGAGAAAATTCACCCT+TGG 0.549057 6.1:+77594241 MS.gene061459:CDS
CGACGAAGGAAGAGTAGTGT+TGG 0.549413 6.1:+77594371 MS.gene061459:CDS
TTCTATGAGGAAATCATCCA+TGG 0.553748 6.1:-77592923 None:intergenic
CGTAGGTGGTGTTACTTCCA+TGG 0.555167 6.1:+77592906 MS.gene061459:intron
TATTGTCAAGGACGAAAACA+AGG 0.557245 6.1:+77595584 MS.gene061459:CDS
ATGTTGTTAACTGGAAGAGT+TGG 0.557976 6.1:-77594182 None:intergenic
ACTAGGAACCAACCACCCTA+AGG 0.558058 6.1:-77595313 None:intergenic
TGGAACTGTTGCTAAACCTA+AGG 0.567484 6.1:-77594277 None:intergenic
TCTAATGGAAAGAGTTCACT+AGG 0.569504 6.1:-77595330 None:intergenic
TAGACTTGAAGCACCAAATG+TGG 0.573480 6.1:-77593064 None:intergenic
CCAAACAGTCTCGTGGAACA+AGG 0.575202 6.1:+77594342 MS.gene061459:CDS
AAGGAAGAACTGTGCGACAA+TGG 0.579055 6.1:-77595406 None:intergenic
ATTGCACCAATGATGAATTG+AGG 0.586290 6.1:-77594510 None:intergenic
AAATTCACCCTTGGGGATGG+AGG 0.587590 6.1:+77594250 MS.gene061459:CDS
AAGGATAACCTCCATCCCCA+AGG 0.591176 6.1:-77594258 None:intergenic
TCTTCCCAAATGTGTATGAG+AGG 0.597203 6.1:+77592947 MS.gene061459:CDS
CTAGGAACCAACCACCCTAA+GGG 0.605522 6.1:-77595312 None:intergenic
CATTTGGGAAGAATTCTATG+AGG 0.610161 6.1:-77592936 None:intergenic
GCAGGTGGAGCATTTGCAGA+TGG 0.625709 6.1:+77592577 MS.gene061459:CDS
TCTCAGTACCATAATTCACA+AGG 0.628815 6.1:-77594227 None:intergenic
CAGATGGTAGCACCCTCAAG+AGG 0.631499 6.1:+77592593 MS.gene061459:CDS
AGAAGATACCATATTTGAGG+TGG 0.638467 6.1:-77595440 None:intergenic
AGAAACACCAAACAGTCTCG+TGG 0.638523 6.1:+77594335 MS.gene061459:CDS
TACTGAAATGATAATATGCA+TGG 0.645085 6.1:+77594734 MS.gene061459:CDS
AGGATAACCTCCATCCCCAA+GGG 0.654102 6.1:-77594257 None:intergenic
GAAGAACTGTGCGACAATGG+CGG 0.658298 6.1:-77595403 None:intergenic
AGTAGCCAAAACTATAGCAG+TGG 0.662275 6.1:-77595193 None:intergenic
AGATGGTAGCACCCTCAAGA+GGG 0.662568 6.1:+77592594 MS.gene061459:CDS
ATTGTCAAGGACGAAAACAA+GGG 0.664475 6.1:+77595585 MS.gene061459:CDS
GCAACATTCATGTTCATCGG+AGG 0.665148 6.1:+77594300 MS.gene061459:CDS
AGTTAGGGTAAAATGGCAGG+TGG 0.667308 6.1:+77592562 None:intergenic
GTCATCTGCACAAAGTGTTG+TGG 0.672138 6.1:+77595359 MS.gene061459:CDS
TTGTCAAGGACGAAAACAAG+GGG 0.689476 6.1:+77595586 MS.gene061459:CDS
GAACAAGGCCGAATCGACGA+AGG 0.689842 6.1:+77594357 MS.gene061459:CDS
ACTGAGAAAATTCACCCTTG+GGG 0.704912 6.1:+77594243 MS.gene061459:CDS
TGAGGTGGCAAAGTGACACA+AGG 0.706842 6.1:-77595425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTTGATACCAAATT+AGG - chr6.1:77594014-77594033 None:intergenic 15.0%
!! TATAAATGAAAAACCTAATT+TGG + chr6.1:77593998-77594017 MS.gene061459:intron 15.0%
!!! CATGATTTTTCTAATTATTT+CGG + chr6.1:77594098-77594117 MS.gene061459:intron 15.0%
!!! AATTTTTCCAATACAAAATG+TGG - chr6.1:77593872-77593891 None:intergenic 20.0%
!!! ACTCTAAAATTAAACTTACT+TGG - chr6.1:77593233-77593252 None:intergenic 20.0%
!!! AGTGATTTTCTTATTTGTTT+TGG + chr6.1:77595269-77595288 MS.gene061459:CDS 20.0%
!!! ATTTTGATTTTGCCATTTAT+AGG + chr6.1:77592769-77592788 MS.gene061459:intron 20.0%
!!! CAAAATTATGTTTCTACATT+TGG + chr6.1:77594916-77594935 MS.gene061459:intron 20.0%
! AAGAATACTAGATGTTTGTA+TGG + chr6.1:77595010-77595029 MS.gene061459:intron 25.0%
! AATATTGCAATGTTGATCAT+TGG + chr6.1:77593171-77593190 MS.gene061459:CDS 25.0%
! AGAAGATAAATCTCTTCAAT+TGG - chr6.1:77595537-77595556 None:intergenic 25.0%
! AGATGATTATTCCTAAACTA+AGG + chr6.1:77592860-77592879 MS.gene061459:intron 25.0%
! ATCATTGAATACAAGAGATA+AGG + chr6.1:77593899-77593918 MS.gene061459:intron 25.0%
! GATGATTATTCCTAAACTAA+GGG + chr6.1:77592861-77592880 MS.gene061459:intron 25.0%
! GGCAAAATCAAAATTTGTAT+TGG - chr6.1:77592763-77592782 None:intergenic 25.0%
! TAAACTATTCAGTTTCTCTT+TGG - chr6.1:77592810-77592829 None:intergenic 25.0%
! TACTGAAATGATAATATGCA+TGG + chr6.1:77594734-77594753 MS.gene061459:CDS 25.0%
! TCAAGTCTAACAAAAAACAA+AGG + chr6.1:77593078-77593097 MS.gene061459:CDS 25.0%
! TTAGGAATAATCATCTATGA+AGG - chr6.1:77592856-77592875 None:intergenic 25.0%
!! AATTTGTCCACATTTTGTAT+TGG + chr6.1:77593862-77593881 MS.gene061459:intron 25.0%
!! AGAATTTGATGATCTTATTG+AGG + chr6.1:77594425-77594444 MS.gene061459:CDS 25.0%
!! ATTTTCCAAACAATTGGATT+CGG + chr6.1:77594594-77594613 MS.gene061459:CDS 25.0%
!! CTCATATTTTCTTGCATTAT+TGG + chr6.1:77592649-77592668 MS.gene061459:CDS 25.0%
!! TAGAATAGTTCATCTAAAGT+AGG - chr6.1:77594991-77595010 None:intergenic 25.0%
!! TATTTTCATACCCTTAGTTT+AGG - chr6.1:77592874-77592893 None:intergenic 25.0%
!!! AATTTGAGGATTTTTTTTGG+TGG + chr6.1:77595151-77595170 MS.gene061459:intron 25.0%
!!! GCTAATTTGAGGATTTTTTT+TGG + chr6.1:77595148-77595167 MS.gene061459:intron 25.0%
!!! GTTTCTTAACTTGTTACTTA+AGG + chr6.1:77594938-77594957 MS.gene061459:intron 25.0%
!!! TTCTTATTTGTTTTGGCATA+TGG + chr6.1:77595276-77595295 MS.gene061459:CDS 25.0%
AACTCTTTCCATTAGAGATA+AGG + chr6.1:77595337-77595356 MS.gene061459:CDS 30.0%
AATAGACCTCAATTCATCAT+TGG + chr6.1:77594504-77594523 MS.gene061459:CDS 30.0%
ATAAACTCTTGAAGACTGTT+TGG + chr6.1:77595054-77595073 MS.gene061459:intron 30.0%
ATCTTCTGTTTGAGAATCAT+TGG + chr6.1:77595550-77595569 MS.gene061459:CDS 30.0%
ATTGCTAACCTTGTGAATTA+TGG + chr6.1:77594219-77594238 MS.gene061459:CDS 30.0%
CCAATTGTTTGGAAAATAAC+AGG - chr6.1:77594591-77594610 None:intergenic 30.0%
CTTTATGAGCATAAGATAAC+TGG + chr6.1:77592622-77592641 MS.gene061459:CDS 30.0%
GATCAACATTGCAATATTCT+TGG - chr6.1:77593169-77593188 None:intergenic 30.0%
GTCTAACAAAAAACAAAGGA+AGG + chr6.1:77593082-77593101 MS.gene061459:CDS 30.0%
TCATGCTATGCATGTAAAAT+TGG - chr6.1:77594083-77594102 None:intergenic 30.0%
TCCTCTATATCTTTCAGAAA+TGG + chr6.1:77594131-77594150 MS.gene061459:CDS 30.0%
TTCCAGTTAACAACATGTTT+AGG + chr6.1:77594189-77594208 MS.gene061459:CDS 30.0%
TTCCTAAACATGTTGTTAAC+TGG - chr6.1:77594194-77594213 None:intergenic 30.0%
TTTCTGTTGTTGCTAATTTG+AGG + chr6.1:77595137-77595156 MS.gene061459:intron 30.0%
! AAATATTGCTTGATGATCGT+AGG + chr6.1:77592889-77592908 MS.gene061459:intron 30.0%
!! ATTTTGCCATTTATAGGAGT+AGG + chr6.1:77592775-77592794 MS.gene061459:intron 30.0%
!! TTTTCTAATTATTTCGGTGC+AGG + chr6.1:77594104-77594123 MS.gene061459:intron 30.0%
!! TTTTGCCATTTATAGGAGTA+GGG + chr6.1:77592776-77592795 MS.gene061459:intron 30.0%
!!! ATAGTTTTGGCTACTTGTTT+TGG + chr6.1:77595201-77595220 MS.gene061459:CDS 30.0%
!!! CCTGTTATTTTCCAAACAAT+TGG + chr6.1:77594588-77594607 MS.gene061459:CDS 30.0%
!!! GTTTTGGAAGAATATTGTCA+AGG + chr6.1:77595572-77595591 MS.gene061459:CDS 30.0%
!!! TGTTTGAGAATCATTGGTTT+TGG + chr6.1:77595556-77595575 MS.gene061459:CDS 30.0%
ACACCATATTCTTCATCTTG+AGG - chr6.1:77594058-77594077 None:intergenic 35.0%
AGAAGATACCATATTTGAGG+TGG - chr6.1:77595443-77595462 None:intergenic 35.0%
ATCATTGGACGTATTCTTCT+TGG + chr6.1:77593186-77593205 MS.gene061459:CDS 35.0%
ATGTTGTTAACTGGAAGAGT+TGG - chr6.1:77594185-77594204 None:intergenic 35.0%
ATTGCACCAATGATGAATTG+AGG - chr6.1:77594513-77594532 None:intergenic 35.0%
ATTGTCAAGGACGAAAACAA+GGG + chr6.1:77595585-77595604 MS.gene061459:CDS 35.0%
CATTTGGGAAGAATTCTATG+AGG - chr6.1:77592939-77592958 None:intergenic 35.0%
CCATACAAAATGGTTTGATC+AGG + chr6.1:77593956-77593975 MS.gene061459:intron 35.0%
GAGGTCTATTCTTTCTCAAA+AGG - chr6.1:77594494-77594513 None:intergenic 35.0%
GATGGAAAACAACTGTCATT+TGG + chr6.1:77595225-77595244 MS.gene061459:CDS 35.0%
GCAAGAAGATACCATATTTG+AGG - chr6.1:77595446-77595465 None:intergenic 35.0%
GCTCTATTTGGATATGATCT+TGG + chr6.1:77592685-77592704 MS.gene061459:CDS 35.0%
TACTGAGAAAATTCACCCTT+GGG + chr6.1:77594242-77594261 MS.gene061459:CDS 35.0%
TATTCTTCATCTTGAGGACA+TGG - chr6.1:77594052-77594071 None:intergenic 35.0%
TATTGTCAAGGACGAAAACA+AGG + chr6.1:77595584-77595603 MS.gene061459:CDS 35.0%
TCATTCCTCACCATACAAAA+TGG + chr6.1:77593946-77593965 MS.gene061459:intron 35.0%
TCTAATGGAAAGAGTTCACT+AGG - chr6.1:77595333-77595352 None:intergenic 35.0%
TCTCAGTACCATAATTCACA+AGG - chr6.1:77594230-77594249 None:intergenic 35.0%
TCTTTCTCAAAAGGAGATTC+TGG - chr6.1:77594485-77594504 None:intergenic 35.0%
TGATTCCCTACTCCTATAAA+TGG - chr6.1:77592784-77592803 None:intergenic 35.0%
TGTCCTCAAGATGAAGAATA+TGG + chr6.1:77594052-77594071 MS.gene061459:intron 35.0%
TTCTATGAGGAAATCATCCA+TGG - chr6.1:77592926-77592945 None:intergenic 35.0%
TTTGGCATATGGAAGATCTT+GGG + chr6.1:77595287-77595306 MS.gene061459:CDS 35.0%
! CCTGATCAAACCATTTTGTA+TGG - chr6.1:77593959-77593978 None:intergenic 35.0%
! GCCATTTCTGAAAGATATAG+AGG - chr6.1:77594135-77594154 None:intergenic 35.0%
! GTAGTGTTGGAAAAGATTAG+AGG + chr6.1:77594384-77594403 MS.gene061459:CDS 35.0%
! TCAAACCATTTTGTATGGTG+AGG - chr6.1:77593954-77593973 None:intergenic 35.0%
! TTTTGGCATATGGAAGATCT+TGG + chr6.1:77595286-77595305 MS.gene061459:CDS 35.0%
!! ATTCTTCTTGGAGTTGGTAT+TGG + chr6.1:77593198-77593217 MS.gene061459:CDS 35.0%
ACTGAGAAAATTCACCCTTG+GGG + chr6.1:77594243-77594262 MS.gene061459:CDS 40.0%
AGGAGAGCTAGTATCTTAGT+TGG + chr6.1:77593102-77593121 MS.gene061459:CDS 40.0%
AGTAGACAAAGCAGCTCATA+AGG - chr6.1:77595488-77595507 None:intergenic 40.0%
AGTAGCCAAAACTATAGCAG+TGG - chr6.1:77595196-77595215 None:intergenic 40.0%
ATAAAGATGAGCCCTCTTGA+GGG - chr6.1:77592608-77592627 None:intergenic 40.0%
ATGGCACCAGCAAAAATTAG+AGG + chr6.1:77594150-77594169 MS.gene061459:CDS 40.0%
CCAGCAACATTCATGTTCAT+CGG + chr6.1:77594297-77594316 MS.gene061459:CDS 40.0%
CCAGCATTTCAACAACTAAC+TGG + chr6.1:77594540-77594559 MS.gene061459:CDS 40.0%
CCAGTTAGTTGTTGAAATGC+TGG - chr6.1:77594543-77594562 None:intergenic 40.0%
CTTTGGTTGACAAGTTTGGT+AGG + chr6.1:77594688-77594707 MS.gene061459:CDS 40.0%
GCAGATGACCTTATCTCTAA+TGG - chr6.1:77595348-77595367 None:intergenic 40.0%
GCTTCCTCTCATACACATTT+GGG - chr6.1:77592954-77592973 None:intergenic 40.0%
GTACTGAGAAAATTCACCCT+TGG + chr6.1:77594241-77594260 MS.gene061459:CDS 40.0%
TACACTCATCTCAATGGCTT+TGG + chr6.1:77594671-77594690 MS.gene061459:CDS 40.0%
TCACTTTGCCACCTCAAATA+TGG + chr6.1:77595432-77595451 MS.gene061459:CDS 40.0%
TCTTCCCAAATGTGTATGAG+AGG + chr6.1:77592947-77592966 MS.gene061459:CDS 40.0%
TCTTGCTACACTCATCTCAA+TGG + chr6.1:77594665-77594684 MS.gene061459:CDS 40.0%
TGCTTCCTCTCATACACATT+TGG - chr6.1:77592955-77592974 None:intergenic 40.0%
TGGAACTGTTGCTAAACCTA+AGG - chr6.1:77594280-77594299 None:intergenic 40.0%
TTGGCATATGGAAGATCTTG+GGG + chr6.1:77595288-77595307 MS.gene061459:CDS 40.0%
TTGTCAAGGACGAAAACAAG+GGG + chr6.1:77595586-77595605 MS.gene061459:CDS 40.0%
! ACTGCTCCTCTAATTTTTGC+TGG - chr6.1:77594159-77594178 None:intergenic 40.0%
! ATTGGAACTTGCTTGGTTTC+TGG - chr6.1:77595519-77595538 None:intergenic 40.0%
! CTATTTTCTGCGTGCCTTTA+GGG + chr6.1:77594801-77594820 MS.gene061459:intron 40.0%
! CTCAAAAGGAGATTCTGGAA+TGG - chr6.1:77594480-77594499 None:intergenic 40.0%
! CTCTTCAATTGGAACTTGCT+TGG - chr6.1:77595526-77595545 None:intergenic 40.0%
! GATTGCCACTGCTATAGTTT+TGG + chr6.1:77595188-77595207 MS.gene061459:intron 40.0%
! GGTTCTGTAAGCTTCTTTTG+TGG + chr6.1:77593123-77593142 MS.gene061459:CDS 40.0%
! TAGACTTGAAGCACCAAATG+TGG - chr6.1:77593067-77593086 None:intergenic 40.0%
! TATTGCTTGATGATCGTAGG+TGG + chr6.1:77592892-77592911 MS.gene061459:intron 40.0%
! TCTTGCATTATTGGAGCACT+TGG + chr6.1:77592658-77592677 MS.gene061459:CDS 40.0%
! TGGTAGGAGAGCTTTCTTTT+TGG + chr6.1:77594704-77594723 MS.gene061459:CDS 40.0%
!! AGAGCTTTCTTTTTGGAAGC+TGG + chr6.1:77594711-77594730 MS.gene061459:CDS 40.0%
!! ATCCTTAACTTGTGCCCTAA+AGG - chr6.1:77594818-77594837 None:intergenic 40.0%
!! ATGGCTTTGGTTGACAAGTT+TGG + chr6.1:77594684-77594703 MS.gene061459:CDS 40.0%
!! CTTGGAGTTGGTATTGGATT+TGG + chr6.1:77593204-77593223 MS.gene061459:CDS 40.0%
!! GGATATGATCTTGGTGTTTC+AGG + chr6.1:77592694-77592713 MS.gene061459:CDS 40.0%
!!! TTGGCTACTTGTTTTGGAGA+TGG + chr6.1:77595207-77595226 MS.gene061459:CDS 40.0%
AAGGAAGAACTGTGCGACAA+TGG - chr6.1:77595409-77595428 None:intergenic 45.0%
AGAAAATTCACCCTTGGGGA+TGG + chr6.1:77594247-77594266 MS.gene061459:CDS 45.0%
AGAAACACCAAACAGTCTCG+TGG + chr6.1:77594335-77594354 MS.gene061459:CDS 45.0%
CAAACAATTGGATTCGGCTC+TGG + chr6.1:77594600-77594619 MS.gene061459:CDS 45.0%
CAGAGCCGAATCCAATTGTT+TGG - chr6.1:77594602-77594621 None:intergenic 45.0%
CATAAAGATGAGCCCTCTTG+AGG - chr6.1:77592609-77592628 None:intergenic 45.0%
CCGATGAACATGAATGTTGC+TGG - chr6.1:77594300-77594319 None:intergenic 45.0%
CTTCATCTTGAGGACATGGT+TGG - chr6.1:77594048-77594067 None:intergenic 45.0%
GCAACATTCATGTTCATCGG+AGG + chr6.1:77594300-77594319 MS.gene061459:CDS 45.0%
GGACGTATTCTTCTTGGAGT+TGG + chr6.1:77593192-77593211 MS.gene061459:CDS 45.0%
! CATTATTGGAGCACTTGGTG+GGG + chr6.1:77592663-77592682 MS.gene061459:CDS 45.0%
! CTACTCTTCCTTCGTCGATT+CGG - chr6.1:77594368-77594387 None:intergenic 45.0%
! GCATTATTGGAGCACTTGGT+GGG + chr6.1:77592662-77592681 MS.gene061459:CDS 45.0%
! TGCATTATTGGAGCACTTGG+TGG + chr6.1:77592661-77592680 MS.gene061459:CDS 45.0%
!! ACGAGACTGTTTGGTGTTTC+TGG - chr6.1:77594336-77594355 None:intergenic 45.0%
!! CTTGCTTGGTTTCTGGCAAT+AGG - chr6.1:77595512-77595531 None:intergenic 45.0%
!! GCTATTTTCTGCGTGCCTTT+AGG + chr6.1:77594800-77594819 MS.gene061459:intron 45.0%
!! GTCATCTGCACAAAGTGTTG+TGG + chr6.1:77595359-77595378 MS.gene061459:CDS 45.0%
!! TGCCTTTAGGGCACAAGTTA+AGG + chr6.1:77594813-77594832 MS.gene061459:intron 45.0%
AAATTCACCCTTGGGGATGG+AGG + chr6.1:77594250-77594269 MS.gene061459:CDS 50.0%
AAGGATAACCTCCATCCCCA+AGG - chr6.1:77594261-77594280 None:intergenic 50.0%
ACTAGGAACCAACCACCCTA+AGG - chr6.1:77595316-77595335 None:intergenic 50.0%
AGATGGTAGCACCCTCAAGA+GGG + chr6.1:77592594-77592613 MS.gene061459:CDS 50.0%
AGGATAACCTCCATCCCCAA+GGG - chr6.1:77594260-77594279 None:intergenic 50.0%
CATCTTGAGGACATGGTTGG+TGG - chr6.1:77594045-77594064 None:intergenic 50.0%
CCAAACAGTCTCGTGGAACA+AGG + chr6.1:77594342-77594361 MS.gene061459:CDS 50.0%
CCTTGTTCCACGAGACTGTT+TGG - chr6.1:77594345-77594364 None:intergenic 50.0%
CGACGAAGGAAGAGTAGTGT+TGG + chr6.1:77594371-77594390 MS.gene061459:CDS 50.0%
CTAGGAACCAACCACCCTAA+GGG - chr6.1:77595315-77595334 None:intergenic 50.0%
GAAGAACTGTGCGACAATGG+CGG - chr6.1:77595406-77595425 None:intergenic 50.0%
GAAGATCTTGGGGTCCCTTA+GGG + chr6.1:77595298-77595317 MS.gene061459:CDS 50.0%
GCTGCTCTTGTGTCCACATT+TGG + chr6.1:77593051-77593070 MS.gene061459:CDS 50.0%
TGAGGTGGCAAAGTGACACA+AGG - chr6.1:77595428-77595447 None:intergenic 50.0%
TGGGGATGGAGGTTATCCTT+AGG + chr6.1:77594261-77594280 MS.gene061459:CDS 50.0%
!! CGTAGGTGGTGTTACTTCCA+TGG + chr6.1:77592906-77592925 MS.gene061459:intron 50.0%
CAGATGGTAGCACCCTCAAG+AGG + chr6.1:77592593-77592612 MS.gene061459:CDS 55.0%
GAACAAGGCCGAATCGACGA+AGG + chr6.1:77594357-77594376 MS.gene061459:CDS 55.0%
GGAAGATCTTGGGGTCCCTT+AGG + chr6.1:77595297-77595316 MS.gene061459:CDS 55.0%
! GCACTTGGTGGGGCTCTATT+TGG + chr6.1:77592673-77592692 MS.gene061459:CDS 55.0%
! GCAGGTGGAGCATTTGCAGA+TGG + chr6.1:77592577-77592596 MS.gene061459:CDS 55.0%
!! GGACATGGTTGGTGGTCTGA+TGG - chr6.1:77594037-77594056 None:intergenic 55.0%
GATCTTGGGGTCCCTTAGGG+TGG + chr6.1:77595301-77595320 MS.gene061459:CDS 60.0%
TTGGGGTCCCTTAGGGTGGT+TGG + chr6.1:77595305-77595324 MS.gene061459:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 77592574 77595626 77592574 ID=MS.gene061459
chr6.1 mRNA 77592574 77595626 77592574 ID=MS.gene061459.t1;Parent=MS.gene061459
chr6.1 exon 77592574 77592715 77592574 ID=MS.gene061459.t1.exon1;Parent=MS.gene061459.t1
chr6.1 CDS 77592574 77592715 77592574 ID=cds.MS.gene061459.t1;Parent=MS.gene061459.t1
chr6.1 exon 77592911 77593233 77592911 ID=MS.gene061459.t1.exon2;Parent=MS.gene061459.t1
chr6.1 CDS 77592911 77593233 77592911 ID=cds.MS.gene061459.t1;Parent=MS.gene061459.t1
chr6.1 exon 77594126 77594755 77594126 ID=MS.gene061459.t1.exon3;Parent=MS.gene061459.t1
chr6.1 CDS 77594126 77594755 77594126 ID=cds.MS.gene061459.t1;Parent=MS.gene061459.t1
chr6.1 exon 77595189 77595626 77595189 ID=MS.gene061459.t1.exon4;Parent=MS.gene061459.t1
chr6.1 CDS 77595189 77595626 77595189 ID=cds.MS.gene061459.t1;Parent=MS.gene061459.t1
Gene Sequence

>MS.gene061459

ATGGCAGGTGGAGCATTTGCAGATGGTAGCACCCTCAAGAGGGCTCATCTTTATGAGCATAAGATAACTGGATATCTCATATTTTCTTGCATTATTGGAGCACTTGGTGGGGCTCTATTTGGATATGATCTTGGTGTTTCAGGTGAGTTCAACTTAATTGTAAATCTCGTTATTATAAAAAATAAACCAATACAAATTTTGATTTTGCCATTTATAGGAGTAGGGAATCATTTCCAAAGAGAAACTGAATAGTTTAACATACATGTATAAGTTTAATAACCTTCATAGATGATTATTCCTAAACTAAGGGTATGAAAATATTGCTTGATGATCGTAGGTGGTGTTACTTCCATGGATGATTTCCTCATAGAATTCTTCCCAAATGTGTATGAGAGGAAGCATGCAAAACTTCAAGAAACAGATTATTGTAAATATGATGATCAAATATTGACACTATTTACTTCATCTCTCTACTTTGCTGCTCTTGTGTCCACATTTGGTGCTTCAAGTCTAACAAAAAACAAAGGAAGGAGAGCTAGTATCTTAGTTGGTTCTGTAAGCTTCTTTTGTGGAGCTATTCTCAATGCAGCTGCCAAGAATATTGCAATGTTGATCATTGGACGTATTCTTCTTGGAGTTGGTATTGGATTTGGAAACCAAGTAAGTTTAATTTTAGAGTTTAATAAAACTAAACACTACTAACAATATAACAAAATTTTACATGTATGTCTAATCATCTTAATCATGTTGACATAGTATAATCACGTTTTAAGAAGTATCGCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATGCAACAAGATAATGAAATATGATTAAATATTTGTATAAAATTTGTCCACATTTTGTATTGGAAAAATTCAAGTCTATCATTGAATACAAGAGATAAGGTTTGAAATGAGTTTATAAAGAATGTCATTCCTCACCATACAAAATGGTTTGATCAGGTTGAGATATATCGACTCAATATAAATGAAAAACCTAATTTGGTATCAAATTTAATCCATCAGACCACCAACCATGTCCTCAAGATGAAGAATATGGTGTCACCAATTTTACATGCATAGCATGATTTTTCTAATTATTTCGGTGCAGGCTGTTCCTCTATATCTTTCAGAAATGGCACCAGCAAAAATTAGAGGAGCAGTGAACCAACTCTTCCAGTTAACAACATGTTTAGGAATTTTGATTGCTAACCTTGTGAATTATGGTACTGAGAAAATTCACCCTTGGGGATGGAGGTTATCCTTAGGTTTAGCAACAGTTCCAGCAACATTCATGTTCATCGGAGGCGTTTTTTGTCCAGAAACACCAAACAGTCTCGTGGAACAAGGCCGAATCGACGAAGGAAGAGTAGTGTTGGAAAAGATTAGAGGAACAAGAAATGTTGATGCAGAATTTGATGATCTTATTGAGGCTAGCAGAGAAGCAAAATCTATTAAGAATCCATTCCAGAATCTCCTTTTGAGAAAGAATAGACCTCAATTCATCATTGGTGCAATTTGTATTCCAGCATTTCAACAACTAACTGGAAACAACTCTATTCTATTCTATGCTCCTGTTATTTTCCAAACAATTGGATTCGGCTCTGGTGCATCTCTATATTCATCTGTTATTACAAGTGTTGCTCTTGTTCTTGCTACACTCATCTCAATGGCTTTGGTTGACAAGTTTGGTAGGAGAGCTTTCTTTTTGGAAGCTGGTACTGAAATGATAATATGCATGGTAATTACATCTTTCATATACATTATTAAGAGTCATGATAAGTTGCTATTTTCTGCGTGCCTTTAGGGCACAAGTTAAGGATCTTAGAAAAGAATTAAAACATAAATTTTGTAGCGAAAAAAAAAAGTTTTTATGATTGTGACATTGAATGCACAATTTTCAAAATTATGTTTCTACATTTGGTTTCTTAACTTGTTACTTAAGGAACAAGTTAACATTTCTCTATTTTTAACCTACTTTAGATGAACTATTCTAAGAATACTAGATGTTTGTATGGACATTTCTCTATTTTCTTCACATAAACTCTTGAAGACTGTTTGGAAGAGCTTATATAAATAATTTATGACACTTTCATAAGTTATTTTCAGTTTGACTCTATTTTTTCTGTTGTTGCTAATTTGAGGATTTTTTTTGGTGGTTGTGAAATTTGCAGATTGCCACTGCTATAGTTTTGGCTACTTGTTTTGGAGATGGAAAACAACTGTCATTTGGAGTTGCTATCTTTCTAGTTTTAGTGATTTTCTTATTTGTTTTGGCATATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCTAGTGAACTCTTTCCATTAGAGATAAGGTCATCTGCACAAAGTGTTGTGGTGTGTGTCAACATGATCTTCACCGCCATTGTCGCACAGTTCTTCCTTGTGTCACTTTGCCACCTCAAATATGGTATCTTCTTGCTTTTTGCTGCATTGATTGTCCTTATGAGCTGCTTTGTCTACTTCCTATTGCCAGAAACCAAGCAAGTTCCAATTGAAGAGATTTATCTTCTGTTTGAGAATCATTGGTTTTGGAAGAATATTGTCAAGGACGAAAACAAGGGGTCCGAGACACAAGCATAA
Protein sequence

>MS.gene061459.t1

MAGGAFADGSTLKRAHLYEHKITGYLIFSCIIGALGGALFGYDLGVSGGVTSMDDFLIEFFPNVYERKHAKLQETDYCKYDDQILTLFTSSLYFAALVSTFGASSLTKNKGRRASILVGSVSFFCGAILNAAAKNIAMLIIGRILLGVGIGFGNQAVPLYLSEMAPAKIRGAVNQLFQLTTCLGILIANLVNYGTEKIHPWGWRLSLGLATVPATFMFIGGVFCPETPNSLVEQGRIDEGRVVLEKIRGTRNVDAEFDDLIEASREAKSIKNPFQNLLLRKNRPQFIIGAICIPAFQQLTGNNSILFYAPVIFQTIGFGSGASLYSSVITSVALVLATLISMALVDKFGRRAFFLEAGTEMIICMIATAIVLATCFGDGKQLSFGVAIFLVLVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSVVVCVNMIFTAIVAQFFLVSLCHLKYGIFLLFAALIVLMSCFVYFLLPETKQVPIEEIYLLFENHWFWKNIVKDENKGSETQA