AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061460.t1 MTR_6g087040 97.255 510 14 0 1 510 1 510 0.0 1014
MS.gene061460.t1 MTR_6g088375 97.255 510 14 0 1 510 1 510 0.0 1014
MS.gene061460.t1 MTR_8g102860 76.861 497 112 1 13 506 13 509 0.0 792
MS.gene061460.t1 MTR_8g102860 76.586 457 104 1 53 506 1 457 0.0 721
MS.gene061460.t1 MTR_0204s0020 58.418 493 201 3 8 499 3 492 0.0 613
MS.gene061460.t1 MTR_0204s0020 58.012 493 200 4 8 499 3 489 0.0 603
MS.gene061460.t1 MTR_7g091690 58.483 501 203 4 1 499 1 498 0.0 598
MS.gene061460.t1 MTR_5g094760 56.917 506 213 4 1 504 1 503 0.0 595
MS.gene061460.t1 MTR_0204s0040 55.419 489 216 2 14 502 17 503 0.0 587
MS.gene061460.t1 MTR_4g116770 55.419 489 216 2 14 502 213 699 0.0 585
MS.gene061460.t1 MTR_4g116790 55.000 500 221 3 3 502 6 501 0.0 575
MS.gene061460.t1 MTR_5g006070 57.114 492 204 6 18 504 14 503 0.0 563
MS.gene061460.t1 MTR_3g008160 53.550 493 226 3 18 508 15 506 0.0 531
MS.gene061460.t1 MTR_1g038630 52.953 508 231 5 1 505 1 503 0.0 525
MS.gene061460.t1 MTR_5g006070 56.455 457 192 6 53 504 1 455 0.0 517
MS.gene061460.t1 MTR_1g104780 53.162 506 228 6 1 502 1 501 2.45e-177 509
MS.gene061460.t1 MTR_1g104750 50.600 500 240 5 1 497 1 496 2.67e-177 508
MS.gene061460.t1 MTR_5g082540 51.389 504 237 5 1 501 1 499 3.19e-177 508
MS.gene061460.t1 MTR_0009s0370 51.600 500 236 4 10 504 5 503 9.38e-176 504
MS.gene061460.t1 MTR_1g104770 50.499 501 240 6 1 497 1 497 4.10e-175 502
MS.gene061460.t1 MTR_3g093010 52.242 513 232 7 1 505 1 508 9.92e-174 499
MS.gene061460.t1 MTR_5g041550 51.650 515 238 6 1 509 1 510 3.63e-173 498
MS.gene061460.t1 MTR_3g023480 51.509 497 231 5 15 504 10 503 6.04e-173 497
MS.gene061460.t1 MTR_4g091370 53.226 496 227 3 18 509 15 509 8.97e-172 494
MS.gene061460.t1 MTR_3g008160 53.275 458 211 3 53 508 1 457 3.95e-170 488
MS.gene061460.t1 MTR_3g008170 50.304 493 237 5 21 506 18 509 4.63e-170 490
MS.gene061460.t1 MTR_1g038600 49.901 507 230 6 1 505 1 485 6.61e-167 481
MS.gene061460.t1 MTR_3g007910 48.643 516 221 8 1 510 1 478 2.03e-160 464
MS.gene061460.t1 MTR_4g090600 53.144 493 226 4 18 506 15 506 3.73e-160 465
MS.gene061460.t1 MTR_3g074390 47.433 487 249 7 21 503 23 506 7.73e-159 461
MS.gene061460.t1 MTR_3g074410 45.168 507 270 8 1 503 1 503 2.95e-157 457
MS.gene061460.t1 MTR_3g074270 46.813 502 240 7 1 500 1 477 1.07e-155 452
MS.gene061460.t1 MTR_4g116790 54.945 364 160 3 3 366 6 365 2.61e-149 432
MS.gene061460.t1 MTR_3g093060 49.443 449 220 4 53 495 1 448 2.25e-145 425
MS.gene061460.t1 MTR_3g074380 46.070 369 194 5 1 367 1 366 4.60e-109 329
MS.gene061460.t1 MTR_3g074370 42.405 316 176 6 191 502 20 333 8.34e-88 273
MS.gene061460.t1 MTR_3g074340 42.089 316 177 6 191 502 20 333 1.15e-87 273
MS.gene061460.t1 MTR_3g074320 42.089 316 177 6 191 502 20 333 2.50e-87 272
MS.gene061460.t1 MTR_3g074400 35.824 455 233 11 53 483 1 420 4.62e-76 246
MS.gene061460.t1 MTR_6g088450 26.489 487 316 12 5 478 42 499 8.13e-53 187
MS.gene061460.t1 MTR_8g103500 26.096 502 337 11 21 510 13 492 2.76e-52 185
MS.gene061460.t1 MTR_4g072030 28.106 491 303 13 28 493 26 491 5.27e-50 179
MS.gene061460.t1 MTR_7g005910 30.705 482 299 14 25 497 32 487 2.27e-49 177
MS.gene061460.t1 MTR_7g446340 27.615 478 310 12 25 492 54 505 3.27e-48 174
MS.gene061460.t1 MTR_6g007340 27.615 478 310 12 25 492 54 505 3.27e-48 174
MS.gene061460.t1 MTR_1g116660 29.508 488 313 14 25 504 34 498 4.07e-48 174
MS.gene061460.t1 MTR_1g116650 31.120 482 285 12 25 497 77 520 8.52e-48 174
MS.gene061460.t1 MTR_3g084110 28.713 505 319 14 16 508 13 488 1.10e-47 172
MS.gene061460.t1 MTR_6g018790 29.512 471 298 11 19 485 98 538 4.04e-47 172
MS.gene061460.t1 MTR_5g096000 48.128 187 74 2 1 187 1 164 1.21e-46 165
MS.gene061460.t1 MTR_5g096000 49.254 134 68 0 377 510 176 309 2.03e-32 126
MS.gene061460.t1 MTR_2g013310 26.141 482 322 10 19 491 46 502 1.27e-46 170
MS.gene061460.t1 MTR_3g116240 27.329 483 302 11 28 485 29 487 2.52e-46 169
MS.gene061460.t1 MTR_4g077740 29.025 472 287 11 34 485 53 496 3.32e-46 169
MS.gene061460.t1 MTR_4g069500 24.547 497 334 9 28 504 31 506 9.39e-46 167
MS.gene061460.t1 MTR_5g075300 27.530 494 314 10 21 492 14 485 4.21e-45 166
MS.gene061460.t1 MTR_2g013310 28.718 390 264 8 111 491 45 429 5.65e-45 164
MS.gene061460.t1 MTR_8g077890 28.671 429 282 7 92 498 65 491 5.98e-45 165
MS.gene061460.t1 MTR_4g069500 26.150 413 285 6 111 504 45 456 6.34e-45 164
MS.gene061460.t1 MTR_7g082270 27.692 455 301 8 32 485 71 498 8.28e-45 165
MS.gene061460.t1 MTR_7g082270 28.715 397 256 7 32 428 71 440 3.23e-41 154
MS.gene061460.t1 MTR_6g087910 29.024 379 252 6 111 485 117 482 6.47e-41 154
MS.gene061460.t1 MTR_4g013205 28.760 379 253 7 111 485 103 468 7.51e-41 153
MS.gene061460.t1 MTR_5g077580 26.449 552 279 16 35 492 35 553 1.10e-40 154
MS.gene061460.t1 MTR_1g022315 27.561 410 283 7 86 490 89 489 1.03e-39 150
MS.gene061460.t1 MTR_1g022315 27.318 399 276 7 97 490 1 390 3.05e-39 147
MS.gene061460.t1 MTR_2g026160 32.267 344 198 9 25 355 26 347 3.51e-39 150
MS.gene061460.t1 MTR_8g077310 26.609 466 305 10 26 485 47 481 7.17e-39 148
MS.gene061460.t1 MTR_3g074330 49.383 162 71 3 1 155 1 158 1.30e-38 139
MS.gene061460.t1 MTR_3g074360 49.383 162 71 3 1 155 1 158 1.30e-38 139
MS.gene061460.t1 MTR_8g077310 27.342 395 270 8 97 485 1 384 4.15e-38 144
MS.gene061460.t1 MTR_5g020270 27.737 411 280 8 86 490 90 489 4.42e-38 146
MS.gene061460.t1 MTR_2g048720 31.361 338 203 7 35 365 35 350 4.59e-38 147
MS.gene061460.t1 MTR_3g074310 48.765 162 72 3 1 155 1 158 6.01e-38 137
MS.gene061460.t1 MTR_3g080240 28.283 396 267 10 95 485 144 527 1.14e-37 145
MS.gene061460.t1 MTR_5g020270 27.500 400 273 8 97 490 1 389 1.76e-37 142
MS.gene061460.t1 MTR_2g049020 29.275 345 216 7 35 371 35 359 5.98e-37 144
MS.gene061460.t1 MTR_8g077300 26.652 469 303 11 25 485 38 473 6.51e-37 142
MS.gene061460.t1 MTR_7g113960 29.584 409 258 12 86 485 67 454 9.75e-37 142
MS.gene061460.t1 MTR_1g038620 42.767 159 73 2 206 364 50 190 9.88e-36 132
MS.gene061460.t1 MTR_7g094450 26.601 406 276 6 86 485 80 469 1.11e-35 139
MS.gene061460.t1 MTR_7g113970 29.469 414 254 12 86 485 102 491 6.41e-35 137
MS.gene061460.t1 MTR_5g019870 27.594 453 290 10 81 509 50 488 1.02e-34 136
MS.gene061460.t1 MTR_4g118610 29.657 408 262 10 86 485 92 482 1.48e-33 133
MS.gene061460.t1 MTR_5g020270 26.923 416 256 9 86 490 90 468 7.27e-33 130
MS.gene061460.t1 MTR_7g094110 26.588 425 282 10 67 485 71 471 1.86e-31 127
MS.gene061460.t1 MTR_0064s0040 44.203 138 65 1 18 155 16 141 1.94e-31 119
MS.gene061460.t1 MTR_4g064820 27.949 390 241 10 6 376 75 443 5.59e-30 123
MS.gene061460.t1 MTR_2g020710 27.764 407 269 10 87 485 1 390 1.85e-29 120
MS.gene061460.t1 MTR_2g020710 27.273 407 273 9 86 485 89 479 2.17e-29 121
MS.gene061460.t1 MTR_2g026140 29.429 333 188 10 36 355 34 332 1.29e-28 119
MS.gene061460.t1 MTR_8g077310 28.819 288 192 6 86 370 87 364 7.99e-28 115
MS.gene061460.t1 MTR_4g069500 23.585 318 224 5 205 504 1 317 2.79e-26 109
MS.gene061460.t1 MTR_7g113960 30.576 278 169 9 86 355 67 328 8.44e-26 109
MS.gene061460.t1 MTR_7g094110 24.944 449 281 11 42 485 54 451 5.70e-25 107
MS.gene061460.t1 MTR_4g118610 28.909 339 216 10 86 416 92 413 4.88e-22 99.0
MS.gene061460.t1 MTR_3g116060 31.795 195 122 3 77 263 31 222 1.06e-21 99.4
MS.gene061460.t1 MTR_3g116060 27.686 242 155 6 260 489 484 717 1.65e-12 70.5
MS.gene061460.t1 MTR_7g113970 27.761 335 207 11 86 406 102 415 1.54e-21 97.4
MS.gene061460.t1 MTR_8g073100 28.302 212 144 3 79 282 39 250 1.95e-20 95.5
MS.gene061460.t1 MTR_8g073100 28.444 225 141 6 278 489 488 705 6.01e-11 65.5
MS.gene061460.t1 MTR_5g024740 27.615 239 152 4 26 262 4 223 3.81e-20 94.4
MS.gene061460.t1 MTR_5g044910 29.944 177 123 1 87 262 47 223 1.11e-19 93.2
MS.gene061460.t1 MTR_2g020710 26.844 339 223 10 86 416 89 410 1.15e-19 91.7
MS.gene061460.t1 MTR_2g020710 26.409 337 225 9 86 415 89 409 1.16e-19 91.7
MS.gene061460.t1 MTR_1g114280 35.065 154 79 3 350 501 21 155 2.54e-19 85.5
MS.gene061460.t1 MTR_2g020710 28.938 273 173 8 86 351 89 347 2.74e-19 90.1
MS.gene061460.t1 MTR_3g118530 32.353 170 114 1 95 263 55 224 1.24e-18 89.7
MS.gene061460.t1 MTR_3g118530 32.353 170 114 1 95 263 55 224 2.35e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061460.t1 AT1G77210 70.833 504 147 0 1 504 1 504 0.0 758
MS.gene061460.t1 AT1G77210 70.833 504 147 0 1 504 1 504 0.0 758
MS.gene061460.t1 AT4G02050 58.964 502 203 3 1 501 1 500 0.0 623
MS.gene061460.t1 AT4G02050 58.964 502 203 3 1 501 1 500 0.0 623
MS.gene061460.t1 AT5G26340 56.496 508 213 6 1 504 1 504 0.0 567
MS.gene061460.t1 AT3G19940 51.587 504 240 3 1 502 1 502 0.0 537
MS.gene061460.t1 AT1G50310 51.683 505 239 4 1 502 1 503 0.0 527
MS.gene061460.t1 AT1G11260 52.632 513 235 5 1 509 1 509 0.0 523
MS.gene061460.t1 AT1G77210 69.143 350 108 0 155 504 6 355 0.0 516
MS.gene061460.t1 AT5G23270 53.707 499 224 6 1 495 1 496 4.60e-179 513
MS.gene061460.t1 AT3G19930 51.287 505 238 5 1 502 1 500 7.81e-178 510
MS.gene061460.t1 AT3G19930 51.287 505 238 5 1 502 1 500 7.81e-178 510
MS.gene061460.t1 AT4G21480 54.115 486 218 4 18 500 15 498 1.11e-174 501
MS.gene061460.t1 AT5G26250 48.671 489 246 4 18 504 14 499 4.09e-164 475
MS.gene061460.t1 AT3G05960 47.082 497 260 3 14 509 9 503 1.84e-162 471
MS.gene061460.t1 AT5G61520 46.421 489 254 4 21 503 19 505 3.24e-156 455
MS.gene061460.t1 AT1G34580 44.423 511 270 8 1 503 1 505 2.40e-148 434
MS.gene061460.t1 AT1G07340 46.407 487 255 6 18 501 15 498 9.30e-148 432
MS.gene061460.t1 AT5G61520 45.633 458 241 4 52 503 2 457 6.49e-141 414
MS.gene061460.t1 AT1G34580 44.227 459 244 7 53 503 1 455 1.64e-132 392
MS.gene061460.t1 AT1G50310 49.858 351 172 3 155 502 11 360 9.98e-121 359
MS.gene061460.t1 AT2G16130 29.363 487 301 9 28 492 27 492 1.39e-56 197
MS.gene061460.t1 AT2G16120 28.747 487 304 9 28 492 27 492 2.50e-55 193
MS.gene061460.t1 AT4G36670 29.637 496 301 11 30 503 21 490 9.04e-54 189
MS.gene061460.t1 AT2G18480 30.786 471 282 12 40 489 36 483 1.96e-53 188
MS.gene061460.t1 AT3G18830 27.634 503 320 12 28 509 37 516 2.31e-53 189
MS.gene061460.t1 AT5G59250 29.389 507 308 14 3 485 72 552 8.00e-46 169
MS.gene061460.t1 AT4G16480 28.205 585 296 19 23 510 24 581 1.98e-45 168
MS.gene061460.t1 AT4G16480 28.205 585 296 19 23 510 24 581 1.98e-45 168
MS.gene061460.t1 AT4G16480 28.205 585 296 19 23 510 24 581 1.98e-45 168
MS.gene061460.t1 AT5G17010 28.016 489 314 9 12 485 33 498 4.46e-45 166
MS.gene061460.t1 AT5G17010 28.016 489 314 9 12 485 33 498 4.46e-45 166
MS.gene061460.t1 AT5G17010 28.016 489 314 9 12 485 33 498 4.46e-45 166
MS.gene061460.t1 AT2G20780 28.032 503 318 16 8 497 37 508 5.63e-45 166
MS.gene061460.t1 AT5G16150 28.330 473 305 9 19 487 98 540 5.84e-45 166
MS.gene061460.t1 AT5G16150 28.330 473 305 9 19 487 98 540 5.84e-45 166
MS.gene061460.t1 AT5G16150 28.330 473 305 9 19 487 98 540 5.84e-45 166
MS.gene061460.t1 AT2G43330 29.289 478 303 10 25 492 30 482 1.14e-43 162
MS.gene061460.t1 AT2G20780 30.476 420 268 14 91 497 42 450 5.48e-42 156
MS.gene061460.t1 AT1G08930 29.371 429 249 13 86 492 98 494 5.82e-42 157
MS.gene061460.t1 AT1G08930 29.371 429 249 13 86 492 98 494 5.82e-42 157
MS.gene061460.t1 AT1G75220 28.362 409 280 6 86 490 88 487 1.34e-40 153
MS.gene061460.t1 AT3G03090 27.935 494 308 10 12 485 33 498 1.42e-40 153
MS.gene061460.t1 AT1G05030 30.097 412 270 11 82 487 64 463 4.82e-40 151
MS.gene061460.t1 AT2G48020 28.501 407 267 7 86 485 68 457 5.73e-40 150
MS.gene061460.t1 AT2G48020 28.501 407 267 7 86 485 68 457 5.73e-40 150
MS.gene061460.t1 AT1G05030 28.788 462 292 13 32 487 85 515 6.23e-40 152
MS.gene061460.t1 AT1G19450 28.851 409 278 6 86 490 89 488 7.42e-40 151
MS.gene061460.t1 AT3G05400 29.216 421 258 13 86 491 66 461 6.84e-39 147
MS.gene061460.t1 AT1G08900 28.395 405 270 8 86 485 23 412 4.46e-38 144
MS.gene061460.t1 AT1G08900 28.395 405 270 8 86 485 57 446 9.02e-38 144
MS.gene061460.t1 AT1G08900 28.395 405 270 8 86 485 65 454 9.74e-38 144
MS.gene061460.t1 AT1G08900 28.395 405 270 8 86 485 65 454 9.74e-38 144
MS.gene061460.t1 AT1G67300 27.297 381 259 7 111 485 118 486 4.02e-37 143
MS.gene061460.t1 AT3G05155 26.895 409 269 9 86 485 67 454 4.92e-37 142
MS.gene061460.t1 AT5G27360 28.157 483 285 13 19 485 28 464 9.04e-37 142
MS.gene061460.t1 AT3G05400 30.750 400 227 15 117 491 67 441 1.10e-36 141
MS.gene061460.t1 AT1G67300 27.353 340 233 6 111 448 118 445 1.56e-36 141
MS.gene061460.t1 AT1G67300 27.353 340 233 6 111 448 118 445 1.56e-36 141
MS.gene061460.t1 AT4G04760 30.184 434 270 11 68 492 2 411 2.00e-36 140
MS.gene061460.t1 AT1G79820 26.596 376 265 5 111 485 121 486 2.08e-36 141
MS.gene061460.t1 AT1G79820 26.596 376 265 5 111 485 121 486 2.08e-36 141
MS.gene061460.t1 AT5G27360 28.157 483 285 13 19 485 76 512 2.41e-36 142
MS.gene061460.t1 AT5G27350 27.347 490 280 12 19 485 24 460 2.63e-36 140
MS.gene061460.t1 AT3G05150 28.501 407 268 8 86 485 75 465 2.67e-36 140
MS.gene061460.t1 AT3G05150 28.501 407 268 8 86 485 75 465 2.93e-36 140
MS.gene061460.t1 AT3G05150 28.501 407 268 8 86 485 75 465 2.93e-36 140
MS.gene061460.t1 AT1G30220 29.494 356 224 9 7 355 10 345 3.17e-36 142
MS.gene061460.t1 AT4G04750 29.016 386 258 8 111 492 145 518 3.42e-36 141
MS.gene061460.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.07e-36 140
MS.gene061460.t1 AT4G04750 29.016 386 258 8 111 492 101 474 4.07e-36 140
MS.gene061460.t1 AT1G67300 27.297 381 258 7 111 485 118 485 4.95e-36 140
MS.gene061460.t1 AT1G67300 27.297 381 258 7 111 485 118 485 4.95e-36 140
MS.gene061460.t1 AT4G04760 30.184 434 270 10 68 492 61 470 5.87e-36 140
MS.gene061460.t1 AT1G54730 27.228 404 276 8 86 485 72 461 6.32e-36 139
MS.gene061460.t1 AT5G18840 29.902 408 261 10 86 485 84 474 1.58e-35 139
MS.gene061460.t1 AT5G27360 29.363 361 233 8 131 485 16 360 3.70e-35 135
MS.gene061460.t1 AT5G27360 29.363 361 233 8 131 485 16 360 3.70e-35 135
MS.gene061460.t1 AT1G08890 28.747 407 266 10 86 485 67 456 4.71e-35 137
MS.gene061460.t1 AT1G67300 27.273 319 220 5 111 427 118 426 6.24e-35 136
MS.gene061460.t1 AT1G67300 27.273 319 220 5 111 427 118 426 6.24e-35 136
MS.gene061460.t1 AT1G79820 26.462 325 229 4 111 435 121 435 1.12e-34 135
MS.gene061460.t1 AT2G35740 27.493 371 228 9 25 381 25 368 1.38e-34 137
MS.gene061460.t1 AT3G05160 28.537 410 259 12 88 485 14 401 1.47e-33 132
MS.gene061460.t1 AT3G05160 28.537 410 259 12 88 485 14 401 1.47e-33 132
MS.gene061460.t1 AT3G05165 28.900 391 236 12 111 485 95 459 1.94e-33 132
MS.gene061460.t1 AT3G05165 28.900 391 236 12 111 485 95 459 1.94e-33 132
MS.gene061460.t1 AT3G05165 28.900 391 236 12 111 485 95 459 1.94e-33 132
MS.gene061460.t1 AT3G05160 28.537 410 259 12 88 485 63 450 2.07e-33 132
MS.gene061460.t1 AT1G08920 26.456 412 269 10 86 485 72 461 7.88e-33 130
MS.gene061460.t1 AT4G04760 29.561 433 269 11 68 491 61 466 3.88e-32 129
MS.gene061460.t1 AT1G08900 29.167 360 235 8 86 440 65 409 4.49e-32 128
MS.gene061460.t1 AT1G08920 26.014 419 269 10 86 485 72 468 9.66e-32 128
MS.gene061460.t1 AT1G54730 26.389 360 247 8 86 441 72 417 4.61e-31 125
MS.gene061460.t1 AT1G54730 25.495 404 262 8 86 485 72 440 4.04e-29 120
MS.gene061460.t1 AT3G20460 27.427 412 265 11 86 485 93 482 4.68e-28 117
MS.gene061460.t1 AT1G08920 26.087 368 238 10 86 441 72 417 8.32e-28 116
MS.gene061460.t1 AT3G05165 29.254 335 195 12 111 429 95 403 8.49e-28 117
MS.gene061460.t1 AT3G05165 29.254 335 195 12 111 429 95 403 1.15e-27 115
MS.gene061460.t1 AT3G05165 29.254 335 195 12 111 429 95 403 1.15e-27 115
MS.gene061460.t1 AT2G48020 29.412 289 183 6 86 367 68 342 4.63e-27 113
MS.gene061460.t1 AT2G48020 29.643 280 169 6 86 355 68 329 7.74e-25 106
MS.gene061460.t1 AT3G05155 26.978 278 176 7 86 355 67 325 7.74e-25 105
MS.gene061460.t1 AT3G51490 34.483 174 112 2 91 263 2 174 1.13e-24 108
MS.gene061460.t1 AT3G51490 29.707 239 149 5 26 263 4 224 1.15e-24 108
MS.gene061460.t1 AT1G54730 25.672 335 231 8 86 416 72 392 1.19e-24 106
MS.gene061460.t1 AT1G54730 25.672 335 231 8 86 416 72 392 1.19e-24 106
MS.gene061460.t1 AT3G51490 29.707 239 149 5 26 263 4 224 1.29e-24 108
MS.gene061460.t1 AT1G54730 24.444 360 233 8 86 441 72 396 2.82e-24 105
MS.gene061460.t1 AT1G79820 24.202 376 226 5 111 485 121 438 1.05e-23 103
MS.gene061460.t1 AT5G27360 26.667 420 246 13 19 422 28 401 2.75e-23 102
MS.gene061460.t1 AT1G54730 26.007 273 188 5 86 355 72 333 3.06e-23 101
MS.gene061460.t1 AT5G17010 24.335 489 272 13 12 485 30 435 1.21e-21 97.8
MS.gene061460.t1 AT1G79820 24.862 362 209 6 127 485 75 376 2.02e-21 96.7
MS.gene061460.t1 AT1G54730 25.498 251 176 4 86 333 72 314 9.72e-21 93.6
MS.gene061460.t1 AT1G54730 25.498 251 176 4 86 333 72 314 9.72e-21 93.6
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 1.97e-20 95.5
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.39e-20 95.1
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.39e-20 95.1
MS.gene061460.t1 AT4G35300 33.908 174 113 2 91 263 52 224 2.39e-20 95.1
MS.gene061460.t1 AT1G54730 25.100 251 177 4 86 333 72 314 6.07e-20 92.4
MS.gene061460.t1 AT1G20840 29.688 192 127 2 80 263 31 222 1.28e-18 89.7
MS.gene061460.t1 AT1G20840 29.688 192 127 2 80 263 31 222 1.28e-18 89.7

Find 96 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGAACTTGCTTGGTTTC+TGG 0.107517 6.1:-77584038 None:intergenic
ACGAGACTGTTTGGTGTTTC+TGG 0.129924 6.1:-77582675 None:intergenic
GCAAGAAGATTCCGTATTTA+AGG 0.184615 6.1:-77583965 None:intergenic
GGATATGATCTTGGTGTTTC+AGG 0.205684 6.1:+77580876 MS.gene061460:CDS
GCACTTGGCGGGGCTCTATT+TGG 0.226102 6.1:+77580855 MS.gene061460:CDS
AAATTCAGCATCAACATTTC+TGG 0.244849 6.1:-77582751 None:intergenic
CTTGGAGTTGGTATTGGATT+TGG 0.262672 6.1:+77581617 MS.gene061460:CDS
ATCATTGGACGTATTCTTCT+TGG 0.273716 6.1:+77581599 MS.gene061460:CDS
TTCCTAAACATGTTGTTAAC+TGG 0.274361 6.1:-77582533 None:intergenic
ATTGCTAACCTTGTGAATTA+TGG 0.277757 6.1:+77582561 MS.gene061460:CDS
GATCAGCATTGCTATATTCT+TGG 0.280820 6.1:-77581579 None:intergenic
TGCTTCCTCTCATACACATT+TGG 0.294387 6.1:-77581365 None:intergenic
CCAATTGTTTGGAAAATAAC+AGG 0.316014 6.1:-77582930 None:intergenic
ATCTTCTGTTTGAGAATCAT+TGG 0.334480 6.1:+77584072 MS.gene061460:CDS
TGTTTGAGAATCATTGGTTT+TGG 0.335335 6.1:+77584078 MS.gene061460:CDS
TACACTCATCTCAATGGCTT+TGG 0.339050 6.1:+77583013 MS.gene061460:CDS
CTTTATGAGCATAAGATAAC+TGG 0.354982 6.1:+77580804 MS.gene061460:CDS
GCAGATGACCTTATCTCTAA+TGG 0.355097 6.1:-77583867 None:intergenic
GCTCTATTTGGATATGATCT+TGG 0.356283 6.1:+77580867 MS.gene061460:CDS
CCAGCATTTCAACAACTAAC+TGG 0.358134 6.1:+77582882 MS.gene061460:CDS
GAAGATCTTGGGGTCCCTTA+GGG 0.359127 6.1:+77583820 MS.gene061460:CDS
GATTGCCACAGCTATAGTTT+TGG 0.362236 6.1:+77583710 MS.gene061460:intron
ATGGCTTTGGTTGACAAGTT+TGG 0.363390 6.1:+77583026 MS.gene061460:CDS
GGAAGATCTTGGGGTCCCTT+AGG 0.366556 6.1:+77583819 MS.gene061460:CDS
TTCCAGTTAACAACATGTTT+AGG 0.367924 6.1:+77582531 MS.gene061460:CDS
CAGAGCCAAATCCAATTGTT+TGG 0.371830 6.1:-77582941 None:intergenic
TTGGGGTCCCTTAGGGTGGT+TGG 0.373657 6.1:+77583827 MS.gene061460:CDS
ATTCTTCTTGGAGTTGGTAT+TGG 0.373658 6.1:+77581611 MS.gene061460:CDS
GCTGCTCTCGTGTCCACATT+TGG 0.375160 6.1:+77581464 MS.gene061460:CDS
CTCAAAAGAAGATTCTGAAA+TGG 0.375386 6.1:-77582819 None:intergenic
CCTTGTTCAACGAGACTGTT+TGG 0.377508 6.1:-77582684 None:intergenic
GCTTCCTCTCATACACATTT+GGG 0.384808 6.1:-77581364 None:intergenic
TCCTCTATATCTTTCAGAAA+TGG 0.385342 6.1:+77582473 MS.gene061460:CDS
AGTAGACAAAGCAGCTCATA+AGG 0.387984 6.1:-77584007 None:intergenic
CTCTTCAATTGGAACTTGCT+TGG 0.389604 6.1:-77584045 None:intergenic
TACTGAGAAAATTCATCCTT+GGG 0.394596 6.1:+77582584 MS.gene061460:CDS
GCATTATTGGAGCACTTGGC+GGG 0.395827 6.1:+77580844 MS.gene061460:CDS
CAAACAATTGGATTTGGCTC+TGG 0.401668 6.1:+77582942 MS.gene061460:CDS
AGAAGATAAATCTCTTCAAT+TGG 0.412850 6.1:-77584056 None:intergenic
GATGGAAAACAACTGTCATT+TGG 0.414524 6.1:+77583747 MS.gene061460:CDS
CCGATGAACATGAATGTTGC+TGG 0.414552 6.1:-77582639 None:intergenic
TTTGGCATATGGAAGATCTT+GGG 0.420424 6.1:+77583809 MS.gene061460:CDS
GTAGTGTTGGAAAAGATTAG+AGG 0.423770 6.1:+77582726 MS.gene061460:CDS
TGCATTATTGGAGCACTTGG+CGG 0.427531 6.1:+77580843 MS.gene061460:CDS
AATATAGCAATGCTGATCAT+TGG 0.436846 6.1:+77581584 MS.gene061460:CDS
CCAGTTAGTTGTTGAAATGC+TGG 0.437664 6.1:-77582882 None:intergenic
AACTCTTTCCATTAGAGATA+AGG 0.443050 6.1:+77583859 MS.gene061460:CDS
GGACGTATTCTTCTTGGAGT+TGG 0.452238 6.1:+77581605 MS.gene061460:CDS
TCACTTTGCCACCTTAAATA+CGG 0.453634 6.1:+77583954 MS.gene061460:CDS
GTACTGAGAAAATTCATCCT+TGG 0.465348 6.1:+77582583 MS.gene061460:CDS
GCCATTTCTGAAAGATATAG+AGG 0.470895 6.1:-77582474 None:intergenic
AATAGACCTCAATTCATCAT+TGG 0.473706 6.1:+77582846 MS.gene061460:CDS
CTACTCTTCCTTCATCGATT+CGG 0.476748 6.1:-77582707 None:intergenic
TGGGGATGGAGGTTATCTCT+AGG 0.477162 6.1:+77582603 MS.gene061460:CDS
TCTTGCATTATTGGAGCACT+TGG 0.482722 6.1:+77580840 MS.gene061460:CDS
TCTTGCTACACTCATCTCAA+TGG 0.483416 6.1:+77583007 MS.gene061460:CDS
AGGAAAGCTAGTATCTTAGT+TGG 0.486632 6.1:+77581515 MS.gene061460:CDS
AAAAGTTAGGGGACAATGGC+AGG 0.489302 6.1:+77580741 None:intergenic
GATCTTGGGGTCCCTTAGGG+TGG 0.511703 6.1:+77583823 MS.gene061460:CDS
TTGGCATATGGAAGATCTTG+GGG 0.514199 6.1:+77583810 MS.gene061460:CDS
GAACAAGGCCGAATCGATGA+AGG 0.514991 6.1:+77582699 MS.gene061460:CDS
TGAATTTGATGATCTTATTG+AGG 0.516440 6.1:+77582767 MS.gene061460:CDS
CGATGAAGGAAGAGTAGTGT+TGG 0.519853 6.1:+77582713 MS.gene061460:CDS
AGAAAATTCATCCTTGGGGA+TGG 0.536487 6.1:+77582589 MS.gene061460:CDS
CATTATTGGAGCACTTGGCG+GGG 0.537160 6.1:+77580845 MS.gene061460:CDS
TTTAGCTTATGCTTGTGTCT+CGG 0.537950 6.1:-77584132 None:intergenic
CCAGCAACATTCATGTTCAT+CGG 0.541413 6.1:+77582639 MS.gene061460:CDS
CTTTGGTTGACAAGTTTGGT+AGG 0.544568 6.1:+77583030 MS.gene061460:CDS
TTCTATGAGGAAATCATCCA+TGG 0.546928 6.1:-77581336 None:intergenic
TATTGTCAAGGACGAAAACA+AGG 0.557245 6.1:+77584106 MS.gene061460:CDS
ATGTTGTTAACTGGAAGAGT+TGG 0.557976 6.1:-77582524 None:intergenic
ACTAGGAACCAACCACCCTA+AGG 0.558058 6.1:-77583835 None:intergenic
TCTAATGGAAAGAGTTCACT+AGG 0.569504 6.1:-77583852 None:intergenic
TAGACTTGAAGCACCAAATG+TGG 0.573480 6.1:-77581477 None:intergenic
CCAAACAGTCTCGTTGAACA+AGG 0.574070 6.1:+77582684 MS.gene061460:CDS
CACAGGTGGTGTAACTTCCA+TGG 0.581024 6.1:+77581319 MS.gene061460:intron
CAGATGGTAGCAACCTCAAG+AGG 0.585067 6.1:+77580775 MS.gene061460:CDS
ATTGCACCAATGATGAATTG+AGG 0.586290 6.1:-77582852 None:intergenic
AAATTCATCCTTGGGGATGG+AGG 0.588295 6.1:+77582592 MS.gene061460:CDS
CATAAAGATGAGCCCTCTTG+AGG 0.588699 6.1:-77580788 None:intergenic
AAGGAAGAATTGTGCGACAA+TGG 0.588890 6.1:-77583928 None:intergenic
CTAGGAACCAACCACCCTAA+GGG 0.605522 6.1:-77583834 None:intergenic
AGAAGATTCCGTATTTAAGG+TGG 0.621906 6.1:-77583962 None:intergenic
GCAGGTGGAGCATTTGCAGA+TGG 0.625709 6.1:+77580759 MS.gene061460:CDS
TCTCAGTACCATAATTCACA+AGG 0.628815 6.1:-77582569 None:intergenic
TACTGAAATGATAATATGCA+TGG 0.645085 6.1:+77583076 MS.gene061460:CDS
AGAGATAACCTCCATCCCCA+AGG 0.646035 6.1:-77582600 None:intergenic
AGTAGCCAAAACTATAGCTG+TGG 0.663529 6.1:-77583715 None:intergenic
ATTGTCAAGGACGAAAACAA+GGG 0.664475 6.1:+77584107 MS.gene061460:CDS
GCAACATTCATGTTCATCGG+AGG 0.665148 6.1:+77582642 MS.gene061460:CDS
GTCATCTGCACAAAGTGTTG+TGG 0.672138 6.1:+77583881 MS.gene061460:CDS
AGATGGTAGCAACCTCAAGA+GGG 0.677343 6.1:+77580776 MS.gene061460:CDS
ACTGAGAAAATTCATCCTTG+GGG 0.680112 6.1:+77582585 MS.gene061460:CDS
TAAGGTGGCAAAGTGACACA+AGG 0.685068 6.1:-77583947 None:intergenic
AGTTAGGGGACAATGGCAGG+TGG 0.686132 6.1:+77580744 None:intergenic
TTGTCAAGGACGAAAACAAG+GGG 0.689476 6.1:+77584108 MS.gene061460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAATGTTTACATAA+AGG - chr6.1:77582073-77582092 None:intergenic 10.0%
!! TATAAATTAAAACGTAAATT+TGG + chr6.1:77581944-77581963 MS.gene061460:intron 10.0%
!!! AAAGTATTTTGTTTTTATAT+GGG - chr6.1:77582315-77582334 None:intergenic 10.0%
!!! TAAAGTATTTTGTTTTTATA+TGG - chr6.1:77582316-77582335 None:intergenic 10.0%
!!! TTGGTTTATTTTTTATAATA+AGG - chr6.1:77580926-77580945 None:intergenic 10.0%
!! GATCTAAAAAAACAATTAAA+AGG + chr6.1:77583165-77583184 MS.gene061460:intron 15.0%
!!! CATGATTTTTCTAATTATTA+TGG + chr6.1:77582440-77582459 MS.gene061460:intron 15.0%
!!! TAGAAAAAATTATCTAAAGT+AGG - chr6.1:77583321-77583340 None:intergenic 15.0%
!! ATTAGACATACATGAAAAAT+TGG - chr6.1:77581699-77581718 None:intergenic 20.0%
!! TAAAATACAATCATCAATGA+AGG - chr6.1:77581020-77581039 None:intergenic 20.0%
!! TCACATAAATGCTTATTTAT+AGG - chr6.1:77583559-77583578 None:intergenic 20.0%
!! TGATTTCCTATTCTTATAAA+TGG - chr6.1:77580966-77580985 None:intergenic 20.0%
!!! AGTGATTTTCTTATTTGTTT+TGG + chr6.1:77583791-77583810 MS.gene061460:CDS 20.0%
!!! ATTTTGCCATTTATAAGAAT+AGG + chr6.1:77580957-77580976 MS.gene061460:intron 20.0%
!!! ATTTTTATTTCACTTAAGGT+GGG - chr6.1:77581994-77582013 None:intergenic 20.0%
!!! CAAAATTATGTTTCTACATT+AGG + chr6.1:77583247-77583266 MS.gene061460:intron 20.0%
!!! CTAATGTAGAAACATAATTT+TGG - chr6.1:77583249-77583268 None:intergenic 20.0%
!!! GCTAATTTGAGAATTTTTTT+TGG + chr6.1:77583670-77583689 MS.gene061460:intron 20.0%
!!! TGAGATTTTTATTTCACTTA+AGG - chr6.1:77581998-77582017 None:intergenic 20.0%
! AATTTGTCAACACTTTGTAT+TGG + chr6.1:77581817-77581836 MS.gene061460:intron 25.0%
! AGAAGATAAATCTCTTCAAT+TGG - chr6.1:77584059-77584078 None:intergenic 25.0%
! CAAATTAGCAACAAAAAAAG+TGG - chr6.1:77583659-77583678 None:intergenic 25.0%
! CCTGATAAAACCAATTTATA+AGG - chr6.1:77581909-77581928 None:intergenic 25.0%
! GGCAAAATCAAAATTTGTAT+TGG - chr6.1:77580945-77580964 None:intergenic 25.0%
! TAAAACCAATTTATAAGGTG+AGG - chr6.1:77581904-77581923 None:intergenic 25.0%
! TACTGAAATGATAATATGCA+TGG + chr6.1:77583076-77583095 MS.gene061460:CDS 25.0%
! TCAAGTCTAACAAAAAACAA+AGG + chr6.1:77581491-77581510 MS.gene061460:CDS 25.0%
! TCATATTGAATAGACAGATA+AGG + chr6.1:77581853-77581872 MS.gene061460:intron 25.0%
! TCTCATATTGAATAGAGATA+AGG + chr6.1:77582013-77582032 MS.gene061460:intron 25.0%
! TTCTAAATAAACTAGTTGCT+TGG + chr6.1:77583336-77583355 MS.gene061460:intron 25.0%
!! ATATACCTTTAAAAACACTC+AGG - chr6.1:77582044-77582063 None:intergenic 25.0%
!! ATCTAAAGTAGGTTAAATCA+GGG - chr6.1:77583310-77583329 None:intergenic 25.0%
!! ATTTTCCAAACAATTGGATT+TGG + chr6.1:77582936-77582955 MS.gene061460:CDS 25.0%
!! CCATACAAAACTTGATTTTA+AGG - chr6.1:77582282-77582301 None:intergenic 25.0%
!! CTCATATTTTCTTGCATTAT+TGG + chr6.1:77580831-77580850 MS.gene061460:CDS 25.0%
!! TATCTAAAGTAGGTTAAATC+AGG - chr6.1:77583311-77583330 None:intergenic 25.0%
!! TGAATTTGATGATCTTATTG+AGG + chr6.1:77582767-77582786 MS.gene061460:CDS 25.0%
!! TTGATAATTTAGAGTTTCGT+CGG + chr6.1:77581206-77581225 MS.gene061460:intron 25.0%
!! TTTTCTAATTATTATGGTGC+AGG + chr6.1:77582446-77582465 MS.gene061460:intron 25.0%
!!! CCTTAAAATCAAGTTTTGTA+TGG + chr6.1:77582279-77582298 MS.gene061460:intron 25.0%
!!! CCTTATAAATTGGTTTTATC+AGG + chr6.1:77581906-77581925 MS.gene061460:intron 25.0%
!!! GATTTTTATTTCACTTAAGG+TGG - chr6.1:77581995-77582014 None:intergenic 25.0%
!!! TGACAAAAGATTGTTTTAGT+CGG + chr6.1:77581243-77581262 MS.gene061460:intron 25.0%
!!! TTCTTATTTGTTTTGGCATA+TGG + chr6.1:77583798-77583817 MS.gene061460:CDS 25.0%
AAATTCAGCATCAACATTTC+TGG - chr6.1:77582754-77582773 None:intergenic 30.0%
AACTCTTTCCATTAGAGATA+AGG + chr6.1:77583859-77583878 MS.gene061460:CDS 30.0%
AATAGACCTCAATTCATCAT+TGG + chr6.1:77582846-77582865 MS.gene061460:CDS 30.0%
AATATAGCAATGCTGATCAT+TGG + chr6.1:77581584-77581603 MS.gene061460:CDS 30.0%
AATGACCTCACCTTATAAAT+TGG + chr6.1:77581896-77581915 MS.gene061460:intron 30.0%
ATCTTCTGTTTGAGAATCAT+TGG + chr6.1:77584072-77584091 MS.gene061460:CDS 30.0%
ATGATTATACTATGTCAACG+TGG - chr6.1:77581730-77581749 None:intergenic 30.0%
ATTACCTAAAATTTCCCCAA+GGG - chr6.1:77581091-77581110 None:intergenic 30.0%
ATTGCTAACCTTGTGAATTA+TGG + chr6.1:77582561-77582580 MS.gene061460:CDS 30.0%
CATTTGGGAAAAATTCTATG+AGG - chr6.1:77581352-77581371 None:intergenic 30.0%
CCAATTGTTTGGAAAATAAC+AGG - chr6.1:77582933-77582952 None:intergenic 30.0%
CTTATTTCCATAAGCTCAAT+AGG + chr6.1:77583457-77583476 MS.gene061460:intron 30.0%
CTTTATGAGCATAAGATAAC+TGG + chr6.1:77580804-77580823 MS.gene061460:CDS 30.0%
GCTAACTCATGTTTACATAA+AGG - chr6.1:77582101-77582120 None:intergenic 30.0%
GTCTAACAAAAAACAAAGGA+AGG + chr6.1:77581495-77581514 MS.gene061460:CDS 30.0%
GTGTTCATTTGGAAATTGAA+TGG - chr6.1:77581150-77581169 None:intergenic 30.0%
TACTGAGAAAATTCATCCTT+GGG + chr6.1:77582584-77582603 MS.gene061460:CDS 30.0%
TATTACCTAAAATTTCCCCA+AGG - chr6.1:77581092-77581111 None:intergenic 30.0%
TCCTCTATATCTTTCAGAAA+TGG + chr6.1:77582473-77582492 MS.gene061460:CDS 30.0%
TGTCCTCAAGATGAAAAATA+TGG + chr6.1:77582396-77582415 MS.gene061460:intron 30.0%
TTCCAGTTAACAACATGTTT+AGG + chr6.1:77582531-77582550 MS.gene061460:CDS 30.0%
TTCCTAAACATGTTGTTAAC+TGG - chr6.1:77582536-77582555 None:intergenic 30.0%
TTTGAGTACTCTTGAACTAA+TGG + chr6.1:77581274-77581293 MS.gene061460:intron 30.0%
! CCAATAGTGTTGAACATAAA+GGG + chr6.1:77582179-77582198 MS.gene061460:intron 30.0%
! CGCATTAATCACAAAGTATT+TGG - chr6.1:77582351-77582370 None:intergenic 30.0%
! CTCAAAAGAAGATTCTGAAA+TGG - chr6.1:77582822-77582841 None:intergenic 30.0%
! TCCAATAGTGTTGAACATAA+AGG + chr6.1:77582178-77582197 MS.gene061460:intron 30.0%
! TGACCATATTTTTCATCTTG+AGG - chr6.1:77582402-77582421 None:intergenic 30.0%
! TGATAATTTAGAGTTTCGTC+GGG + chr6.1:77581207-77581226 MS.gene061460:intron 30.0%
! TTATCAAGAGTGTGTTCATT+TGG - chr6.1:77581161-77581180 None:intergenic 30.0%
! TTGAACATAAAGGGTGTATT+AGG + chr6.1:77582188-77582207 MS.gene061460:intron 30.0%
!! TCTTACCTGAGTGTTTTTAA+AGG + chr6.1:77582036-77582055 MS.gene061460:intron 30.0%
!!! ATAGTTTTGGCTACTTGTTT+TGG + chr6.1:77583723-77583742 MS.gene061460:CDS 30.0%
!!! CAAAACTTGATTTTAAGGTG+AGG - chr6.1:77582277-77582296 None:intergenic 30.0%
!!! CCTGTTATTTTCCAAACAAT+TGG + chr6.1:77582930-77582949 MS.gene061460:CDS 30.0%
!!! GTTTTGGAAGAATATTGTCA+AGG + chr6.1:77584094-77584113 MS.gene061460:CDS 30.0%
!!! TGTTTGAGAATCATTGGTTT+TGG + chr6.1:77584078-77584097 MS.gene061460:CDS 30.0%
AAGCTATCCTATTGAGCTTA+TGG - chr6.1:77583467-77583486 None:intergenic 35.0%
ACTGAGAAAATTCATCCTTG+GGG + chr6.1:77582585-77582604 MS.gene061460:CDS 35.0%
AGAAGATTCCGTATTTAAGG+TGG - chr6.1:77583965-77583984 None:intergenic 35.0%
AGGAAAGCTAGTATCTTAGT+TGG + chr6.1:77581515-77581534 MS.gene061460:CDS 35.0%
ATCATTGGACGTATTCTTCT+TGG + chr6.1:77581599-77581618 MS.gene061460:CDS 35.0%
ATGTTGTTAACTGGAAGAGT+TGG - chr6.1:77582527-77582546 None:intergenic 35.0%
ATTGCACCAATGATGAATTG+AGG - chr6.1:77582855-77582874 None:intergenic 35.0%
ATTGTCAAGGACGAAAACAA+GGG + chr6.1:77584107-77584126 MS.gene061460:CDS 35.0%
CCCTTTATGTTCAACACTAT+TGG - chr6.1:77582182-77582201 None:intergenic 35.0%
GATCAGCATTGCTATATTCT+TGG - chr6.1:77581582-77581601 None:intergenic 35.0%
GATGGAAAACAACTGTCATT+TGG + chr6.1:77583747-77583766 MS.gene061460:CDS 35.0%
GCAAGAAGATTCCGTATTTA+AGG - chr6.1:77583968-77583987 None:intergenic 35.0%
GCTCTATTTGGATATGATCT+TGG + chr6.1:77580867-77580886 MS.gene061460:CDS 35.0%
GTACTGAGAAAATTCATCCT+TGG + chr6.1:77582583-77582602 MS.gene061460:CDS 35.0%
TATTGTCAAGGACGAAAACA+AGG + chr6.1:77584106-77584125 MS.gene061460:CDS 35.0%
TCACTTTGCCACCTTAAATA+CGG + chr6.1:77583954-77583973 MS.gene061460:CDS 35.0%
TCTAATGGAAAGAGTTCACT+AGG - chr6.1:77583855-77583874 None:intergenic 35.0%
TCTCAGTACCATAATTCACA+AGG - chr6.1:77582572-77582591 None:intergenic 35.0%
TTACCTAAAATTTCCCCAAG+GGG - chr6.1:77581090-77581109 None:intergenic 35.0%
TTCTATGAGGAAATCATCCA+TGG - chr6.1:77581339-77581358 None:intergenic 35.0%
TTTATTTCACTTAAGGTGGG+TGG - chr6.1:77581991-77582010 None:intergenic 35.0%
TTTGGCATATGGAAGATCTT+GGG + chr6.1:77583809-77583828 MS.gene061460:CDS 35.0%
! AAATGCTAACTTGTGCCTTA+AGG - chr6.1:77583287-77583306 None:intergenic 35.0%
! GAGTATTTCTTGATGATCAC+AGG + chr6.1:77581302-77581321 MS.gene061460:intron 35.0%
! GCCATTTCTGAAAGATATAG+AGG - chr6.1:77582477-77582496 None:intergenic 35.0%
! GTAGTGTTGGAAAAGATTAG+AGG + chr6.1:77582726-77582745 MS.gene061460:CDS 35.0%
! TATTTCTTGATGATCACAGG+TGG + chr6.1:77581305-77581324 MS.gene061460:intron 35.0%
! TTTTCCCAAATGTGTATGAG+AGG + chr6.1:77581360-77581379 MS.gene061460:CDS 35.0%
! TTTTGGCATATGGAAGATCT+TGG + chr6.1:77583808-77583827 MS.gene061460:CDS 35.0%
!! ATTCTTCTTGGAGTTGGTAT+TGG + chr6.1:77581611-77581630 MS.gene061460:CDS 35.0%
AAGGAAGAATTGTGCGACAA+TGG - chr6.1:77583931-77583950 None:intergenic 40.0%
AGAAAATTCATCCTTGGGGA+TGG + chr6.1:77582589-77582608 MS.gene061460:CDS 40.0%
AGTAGACAAAGCAGCTCATA+AGG - chr6.1:77584010-77584029 None:intergenic 40.0%
AGTAGCCAAAACTATAGCTG+TGG - chr6.1:77583718-77583737 None:intergenic 40.0%
ATGGCACCAGCAAAAATTAG+AGG + chr6.1:77582492-77582511 MS.gene061460:CDS 40.0%
CAGAGCCAAATCCAATTGTT+TGG - chr6.1:77582944-77582963 None:intergenic 40.0%
CCAGCAACATTCATGTTCAT+CGG + chr6.1:77582639-77582658 MS.gene061460:CDS 40.0%
CCAGCATTTCAACAACTAAC+TGG + chr6.1:77582882-77582901 MS.gene061460:CDS 40.0%
CCAGTTAGTTGTTGAAATGC+TGG - chr6.1:77582885-77582904 None:intergenic 40.0%
CTTTGGTTGACAAGTTTGGT+AGG + chr6.1:77583030-77583049 MS.gene061460:CDS 40.0%
GCAGATGACCTTATCTCTAA+TGG - chr6.1:77583870-77583889 None:intergenic 40.0%
GCTTCCTCTCATACACATTT+GGG - chr6.1:77581367-77581386 None:intergenic 40.0%
TACACTCATCTCAATGGCTT+TGG + chr6.1:77583013-77583032 MS.gene061460:CDS 40.0%
TCTTGCTACACTCATCTCAA+TGG + chr6.1:77583007-77583026 MS.gene061460:CDS 40.0%
TGCTTCCTCTCATACACATT+TGG - chr6.1:77581368-77581387 None:intergenic 40.0%
TTGGCATATGGAAGATCTTG+GGG + chr6.1:77583810-77583829 MS.gene061460:CDS 40.0%
TTGTCAAGGACGAAAACAAG+GGG + chr6.1:77584108-77584127 MS.gene061460:CDS 40.0%
! ACTGCTCCTCTAATTTTTGC+TGG - chr6.1:77582501-77582520 None:intergenic 40.0%
! ATTGGAACTTGCTTGGTTTC+TGG - chr6.1:77584041-77584060 None:intergenic 40.0%
! CAAACAATTGGATTTGGCTC+TGG + chr6.1:77582942-77582961 MS.gene061460:CDS 40.0%
! CTACTCTTCCTTCATCGATT+CGG - chr6.1:77582710-77582729 None:intergenic 40.0%
! CTCTTCAATTGGAACTTGCT+TGG - chr6.1:77584048-77584067 None:intergenic 40.0%
! GATTGCCACAGCTATAGTTT+TGG + chr6.1:77583710-77583729 MS.gene061460:intron 40.0%
! GGTTCTGTAAGCTTCTTTTG+TGG + chr6.1:77581536-77581555 MS.gene061460:CDS 40.0%
! TAGACTTGAAGCACCAAATG+TGG - chr6.1:77581480-77581499 None:intergenic 40.0%
! TCTTGCATTATTGGAGCACT+TGG + chr6.1:77580840-77580859 MS.gene061460:CDS 40.0%
! TGGTAGGAGAGCTTTCTTTT+TGG + chr6.1:77583046-77583065 MS.gene061460:CDS 40.0%
!! AGAGCTTTCTTTTTGGAAGC+TGG + chr6.1:77583053-77583072 MS.gene061460:CDS 40.0%
!! ATGGCTTTGGTTGACAAGTT+TGG + chr6.1:77583026-77583045 MS.gene061460:CDS 40.0%
!! CTTGGAGTTGGTATTGGATT+TGG + chr6.1:77581617-77581636 MS.gene061460:CDS 40.0%
!! GCTTCTTAACTTGTGCCTTA+AGG + chr6.1:77583269-77583288 MS.gene061460:intron 40.0%
!! GGATATGATCTTGGTGTTTC+AGG + chr6.1:77580876-77580895 MS.gene061460:CDS 40.0%
!!! TTGGCTACTTGTTTTGGAGA+TGG + chr6.1:77583729-77583748 MS.gene061460:CDS 40.0%
AAATTCATCCTTGGGGATGG+AGG + chr6.1:77582592-77582611 MS.gene061460:CDS 45.0%
AGATGGTAGCAACCTCAAGA+GGG + chr6.1:77580776-77580795 MS.gene061460:CDS 45.0%
AGATTTGATGTGCGACGCAA+TGG - chr6.1:77582159-77582178 None:intergenic 45.0%
CATAAAGATGAGCCCTCTTG+AGG - chr6.1:77580791-77580810 None:intergenic 45.0%
CCAAACAGTCTCGTTGAACA+AGG + chr6.1:77582684-77582703 MS.gene061460:CDS 45.0%
CCGATGAACATGAATGTTGC+TGG - chr6.1:77582642-77582661 None:intergenic 45.0%
CCTTGTTCAACGAGACTGTT+TGG - chr6.1:77582687-77582706 None:intergenic 45.0%
CGATGAAGGAAGAGTAGTGT+TGG + chr6.1:77582713-77582732 MS.gene061460:CDS 45.0%
GCAACATTCATGTTCATCGG+AGG + chr6.1:77582642-77582661 MS.gene061460:CDS 45.0%
GGACGTATTCTTCTTGGAGT+TGG + chr6.1:77581605-77581624 MS.gene061460:CDS 45.0%
TAAGGTGGCAAAGTGACACA+AGG - chr6.1:77583950-77583969 None:intergenic 45.0%
! CATGCTAACTCGTGTCGTTA+GGG + chr6.1:77583131-77583150 MS.gene061460:intron 45.0%
! GAACCCCTTGGGGAAATTTT+AGG + chr6.1:77581084-77581103 MS.gene061460:intron 45.0%
! TCATGCTAACTCGTGTCGTT+AGG + chr6.1:77583130-77583149 MS.gene061460:intron 45.0%
! TGCATTATTGGAGCACTTGG+CGG + chr6.1:77580843-77580862 MS.gene061460:CDS 45.0%
!! ACGAGACTGTTTGGTGTTTC+TGG - chr6.1:77582678-77582697 None:intergenic 45.0%
!! GTCATCTGCACAAAGTGTTG+TGG + chr6.1:77583881-77583900 MS.gene061460:CDS 45.0%
ACTAGGAACCAACCACCCTA+AGG - chr6.1:77583838-77583857 None:intergenic 50.0%
ACTTAAGGTGGGTGGTCTCA+TGG - chr6.1:77581983-77582002 None:intergenic 50.0%
AGAGATAACCTCCATCCCCA+AGG - chr6.1:77582603-77582622 None:intergenic 50.0%
CAAGGGGTTCACTTGAAAGG+GGG - chr6.1:77581074-77581093 None:intergenic 50.0%
CACAGGTGGTGTAACTTCCA+TGG + chr6.1:77581319-77581338 MS.gene061460:intron 50.0%
CAGATGGTAGCAACCTCAAG+AGG + chr6.1:77580775-77580794 MS.gene061460:CDS 50.0%
CCAAGGGGTTCACTTGAAAG+GGG - chr6.1:77581075-77581094 None:intergenic 50.0%
CCCAAGGGGTTCACTTGAAA+GGG - chr6.1:77581076-77581095 None:intergenic 50.0%
CTAGGAACCAACCACCCTAA+GGG - chr6.1:77583837-77583856 None:intergenic 50.0%
GAACAAGGCCGAATCGATGA+AGG + chr6.1:77582699-77582718 MS.gene061460:CDS 50.0%
GAAGATCTTGGGGTCCCTTA+GGG + chr6.1:77583820-77583839 MS.gene061460:CDS 50.0%
TGGGGATGGAGGTTATCTCT+AGG + chr6.1:77582603-77582622 MS.gene061460:CDS 50.0%
! CATTATTGGAGCACTTGGCG+GGG + chr6.1:77580845-77580864 MS.gene061460:CDS 50.0%
! CCCTTTCAAGTGAACCCCTT+GGG + chr6.1:77581073-77581092 MS.gene061460:intron 50.0%
! CCTTTCAAGTGAACCCCTTG+GGG + chr6.1:77581074-77581093 MS.gene061460:intron 50.0%
! GCATTATTGGAGCACTTGGC+GGG + chr6.1:77580844-77580863 MS.gene061460:CDS 50.0%
CCCCAAGGGGTTCACTTGAA+AGG - chr6.1:77581077-77581096 None:intergenic 55.0%
GCTGCTCTCGTGTCCACATT+TGG + chr6.1:77581464-77581483 MS.gene061460:CDS 55.0%
GGAAGATCTTGGGGTCCCTT+AGG + chr6.1:77583819-77583838 MS.gene061460:CDS 55.0%
! CCCCTTTCAAGTGAACCCCT+TGG + chr6.1:77581072-77581091 MS.gene061460:intron 55.0%
! GCAGGTGGAGCATTTGCAGA+TGG + chr6.1:77580759-77580778 MS.gene061460:CDS 55.0%
GATCTTGGGGTCCCTTAGGG+TGG + chr6.1:77583823-77583842 MS.gene061460:CDS 60.0%
GCACTTGGCGGGGCTCTATT+TGG + chr6.1:77580855-77580874 MS.gene061460:CDS 60.0%
TTGGGGTCCCTTAGGGTGGT+TGG + chr6.1:77583827-77583846 MS.gene061460:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 77580756 77584148 77580756 ID=MS.gene061460
chr6.1 mRNA 77580756 77584148 77580756 ID=MS.gene061460.t1;Parent=MS.gene061460
chr6.1 exon 77580756 77580897 77580756 ID=MS.gene061460.t1.exon1;Parent=MS.gene061460.t1
chr6.1 CDS 77580756 77580897 77580756 ID=cds.MS.gene061460.t1;Parent=MS.gene061460.t1
chr6.1 exon 77581324 77581646 77581324 ID=MS.gene061460.t1.exon2;Parent=MS.gene061460.t1
chr6.1 CDS 77581324 77581646 77581324 ID=cds.MS.gene061460.t1;Parent=MS.gene061460.t1
chr6.1 exon 77582468 77583097 77582468 ID=MS.gene061460.t1.exon3;Parent=MS.gene061460.t1
chr6.1 CDS 77582468 77583097 77582468 ID=cds.MS.gene061460.t1;Parent=MS.gene061460.t1
chr6.1 exon 77583711 77584148 77583711 ID=MS.gene061460.t1.exon4;Parent=MS.gene061460.t1
chr6.1 CDS 77583711 77584148 77583711 ID=cds.MS.gene061460.t1;Parent=MS.gene061460.t1
Gene Sequence

>MS.gene061460

ATGGCAGGTGGAGCATTTGCAGATGGTAGCAACCTCAAGAGGGCTCATCTTTATGAGCATAAGATAACTGGATATCTCATATTTTCTTGCATTATTGGAGCACTTGGCGGGGCTCTATTTGGATATGATCTTGGTGTTTCAGGTGAGTTCAACATAATTGTAAATCTCCTTATTATAAAAAATAAACCAATACAAATTTTGATTTTGCCATTTATAAGAATAGGAAATCATTTTCAAAGAAAAATTGAAAAGTTTATAAAACCTTCATTGATGATTGTATTTTATCACAAGTTAAATATAACTCAACTTTTTTTTCCCCCTTTCAAGTGAACCCCTTGGGGAAATTTTAGGTAATAATTTGAAAATCACATATATATATATTTTTTATTAACCATTCAATTTCCAAATGAACACACTCTTGATAATTTAGAGTTCAGTCACAACACACACTTGATAATTTAGAGTTTCGTCGGGAATAAATAAAGTTTGACAAAAGATTGTTTTAGTCGGAATTTAAATTTGAGTACTCTTGAACTAATGGTATGAGAGTATTTCTTGATGATCACAGGTGGTGTAACTTCCATGGATGATTTCCTCATAGAATTTTTCCCAAATGTGTATGAGAGGAAGCATGCAAAACTTCAAGAAACAGATTATTGTAAATATGATGATCAAATATTGACACTATTTACTTCATCTCTCTACTTTGCTGCTCTCGTGTCCACATTTGGTGCTTCAAGTCTAACAAAAAACAAAGGAAGGAAAGCTAGTATCTTAGTTGGTTCTGTAAGCTTCTTTTGTGGAGCTATTCTCAATGCAGCTGCCAAGAATATAGCAATGCTGATCATTGGACGTATTCTTCTTGGAGTTGGTATTGGATTTGGAAATCAAGTAAGTTTAATTTTAGAGCTTAATAACTATACACTAATAACAATATAAGCCAATTTTTCATGTATGTCTAATCATTTCAACCACGTTGACATAGTATAATCATGTTTTAAGAAGTATTGCTATTATTATGATGTGACAAGATAATGAAATATGATTAAATATTTATATAAAATTTGTCAACACTTTGTATTGGAAAAATTCAAGTCTCATATTGAATAGACAGATAAGGTTTGAATTGAGTTTATAAAGAATGACCTCACCTTATAAATTGGTTTTATCAGGATGAGTTAGACTCAATATAAATTAAAACGTAAATTTGGTATCAAATTTTATCCATGAGACCACCCACCTTAAGTGAAATAAAAATCTCATATTGAATAGAGATAAGGTCTTACCTGAGTGTTTTTAAAGGTATATACAAATCCTTTATGTAAACATTTTTTTTTTTTATCCTTTATGTAAACATGAGTTAGCTTAGTATAATAATCTATGACGTTATCAGAGTCTATCCATTGCGTCGCACATCAAATCTCCAATAGTGTTGAACATAAAGGGTGTATTAGGAAAAACTCTATTCTCACACAAAATAGAGATAAATTCTAAAAATAGTTTATAAAGAGTGACATTCCTCACCTTAAAATCAAGTTTTGTATGGTCGAGAATATCCCATATAAAAACAAAATACTTTACTTTTTTGTTCGCCAAATACTTTGTGATTAATGCGTAGTTATAAATTTTTTACTTCAACATGTCCTCAAGATGAAAAATATGGTCACGAATTTTACTTACATATCATGATTTTTCTAATTATTATGGTGCAGGCTGTTCCTCTATATCTTTCAGAAATGGCACCAGCAAAAATTAGAGGAGCAGTGAACCAACTCTTCCAGTTAACAACATGTTTAGGAATTTTGATTGCTAACCTTGTGAATTATGGTACTGAGAAAATTCATCCTTGGGGATGGAGGTTATCTCTAGGTTTAGCAACAGTTCCAGCAACATTCATGTTCATCGGAGGCGTTTTTTGTCCAGAAACACCAAACAGTCTCGTTGAACAAGGCCGAATCGATGAAGGAAGAGTAGTGTTGGAAAAGATTAGAGGAACCAGAAATGTTGATGCTGAATTTGATGATCTTATTGAGGCTAGCAGAGAAGCAAAATCTATTAAGAATCCATTTCAGAATCTTCTTTTGAGAAAGAATAGACCTCAATTCATCATTGGTGCAATTTGTATTCCAGCATTTCAACAACTAACTGGAAACAACTCTATTCTATTCTATGCTCCTGTTATTTTCCAAACAATTGGATTTGGCTCTGGTGCATCTCTATATTCATCTGTTATTACAAGTGTTGCTCTTGTTCTTGCTACACTCATCTCAATGGCTTTGGTTGACAAGTTTGGTAGGAGAGCTTTCTTTTTGGAAGCTGGTACTGAAATGATAATATGCATGGTAATTACATCTTTCATATATATTATTAAGTGTCATGCTAACTCGTGTCGTTAGGGCACATATTAATGATCTAAAAAAACAATTAAAAGGTAAATTTTGTATTGAAAAAAAAAGTTTTTAAGCTTTCAAGATATTGAATGTACAATTTCCAAAATTATGTTTCTACATTAGGCTTCTTAACTTGTGCCTTAAGGCACAAGTTAGCATTTCCCTGATTTAACCTACTTTAGATAATTTTTTCTAAATAAACTAGTTGCTTGGATTGTCGTGTTTTAGCTTATCTACTCACATAAACACTTGAAAACTGTCTAAAAGTGCTTATAAAAACAACTAATGACACATTCATAAGTTATTTTCAGCTTATTTCCATAAGCTCAATAGGATAGCTTATGAAAACAGCTTATTACTTTTATGAAAACAGTTTGTCTCTATTGTTATCTTTTTTGTTACAGAAATAACCTATAAATAAGCATTTATGTGATAAAAACTTATGCTATACGTGTTTGATGTTTATGCAAAGAGAACGTGAAATGAAAAATAAAACATGACTGATATACACCACTTTTTTTGTTGCTAATTTGAGAATTTTTTTTGGTTGTTTTGAAATTTGCAGATTGCCACAGCTATAGTTTTGGCTACTTGTTTTGGAGATGGAAAACAACTGTCATTTGGAGTTGCTATCTTTCTAGTTTTAGTGATTTTCTTATTTGTTTTGGCATATGGAAGATCTTGGGGTCCCTTAGGGTGGTTGGTTCCTAGTGAACTCTTTCCATTAGAGATAAGGTCATCTGCACAAAGTGTTGTGGTGTGTGTCAACATGATCTTCACAGCCATTGTCGCACAATTCTTCCTTGTGTCACTTTGCCACCTTAAATACGGAATCTTCTTGCTTTTTGCTGCATTGATTGTCCTTATGAGCTGCTTTGTCTACTTCTTATTGCCAGAAACCAAGCAAGTTCCAATTGAAGAGATTTATCTTCTGTTTGAGAATCATTGGTTTTGGAAGAATATTGTCAAGGACGAAAACAAGGGGTCCGAGACACAAGCATAA
Protein sequence

>MS.gene061460.t1

MAGGAFADGSNLKRAHLYEHKITGYLIFSCIIGALGGALFGYDLGVSGGVTSMDDFLIEFFPNVYERKHAKLQETDYCKYDDQILTLFTSSLYFAALVSTFGASSLTKNKGRKASILVGSVSFFCGAILNAAAKNIAMLIIGRILLGVGIGFGNQAVPLYLSEMAPAKIRGAVNQLFQLTTCLGILIANLVNYGTEKIHPWGWRLSLGLATVPATFMFIGGVFCPETPNSLVEQGRIDEGRVVLEKIRGTRNVDAEFDDLIEASREAKSIKNPFQNLLLRKNRPQFIIGAICIPAFQQLTGNNSILFYAPVIFQTIGFGSGASLYSSVITSVALVLATLISMALVDKFGRRAFFLEAGTEMIICMIATAIVLATCFGDGKQLSFGVAIFLVLVIFLFVLAYGRSWGPLGWLVPSELFPLEIRSSAQSVVVCVNMIFTAIVAQFFLVSLCHLKYGIFLLFAALIVLMSCFVYFLLPETKQVPIEEIYLLFENHWFWKNIVKDENKGSETQA