Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062870.t1 | XP_013467108.1 | 97.7 | 556 | 9 | 1 | 1 | 552 | 54 | 609 | 6.50E-308 | 1065.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062870.t1 | A0A072VGG8 | 97.7 | 556 | 9 | 1 | 1 | 552 | 54 | 609 | 4.7e-308 | 1065.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene062870 | 0.805955 | 1.04E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene062870 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene053418 | MS.gene062870 | 0.86022 | 2.40E-63 | -1.69E-46 |
| MS.gene056834 | MS.gene062870 | 0.824689 | 7.05E-54 | -1.69E-46 |
| MS.gene057034 | MS.gene062870 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene062870 | 0.830022 | 3.71E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene062870 | 0.836555 | 8.74E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene062870 | 0.805061 | 1.60E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062870.t1 | MTR_1g044135 | 97.662 | 556 | 9 | 1 | 1 | 552 | 54 | 609 | 0.0 | 1127 |
| MS.gene062870.t1 | MTR_1g073890 | 68.036 | 560 | 134 | 8 | 1 | 552 | 57 | 579 | 0.0 | 754 |
| MS.gene062870.t1 | MTR_3g091180 | 37.900 | 562 | 301 | 14 | 1 | 532 | 37 | 580 | 1.01e-106 | 332 |
| MS.gene062870.t1 | MTR_1g061540 | 33.022 | 536 | 290 | 12 | 1 | 521 | 40 | 521 | 1.67e-71 | 238 |
| MS.gene062870.t1 | MTR_7g103490 | 33.515 | 549 | 289 | 14 | 1 | 523 | 40 | 538 | 2.84e-70 | 236 |
| MS.gene062870.t1 | MTR_1g092540 | 58.929 | 168 | 63 | 3 | 362 | 526 | 414 | 578 | 4.78e-56 | 198 |
| MS.gene062870.t1 | MTR_1g092540 | 35.751 | 193 | 122 | 1 | 1 | 191 | 37 | 229 | 3.42e-36 | 142 |
| MS.gene062870.t1 | MTR_0318s0020 | 53.191 | 188 | 84 | 2 | 347 | 532 | 380 | 565 | 5.75e-56 | 197 |
| MS.gene062870.t1 | MTR_0318s0020 | 36.792 | 212 | 113 | 2 | 1 | 191 | 139 | 350 | 2.54e-34 | 137 |
| MS.gene062870.t1 | MTR_6g461910 | 51.479 | 169 | 77 | 4 | 371 | 535 | 343 | 510 | 1.33e-45 | 168 |
| MS.gene062870.t1 | MTR_6g461910 | 40.513 | 195 | 112 | 2 | 1 | 191 | 47 | 241 | 5.56e-37 | 144 |
| MS.gene062870.t1 | MTR_4g021260 | 40.000 | 220 | 115 | 3 | 1 | 203 | 30 | 249 | 2.73e-42 | 158 |
| MS.gene062870.t1 | MTR_4g021260 | 43.836 | 146 | 77 | 3 | 378 | 518 | 330 | 475 | 6.34e-32 | 129 |
| MS.gene062870.t1 | MTR_7g063040 | 40.404 | 198 | 111 | 1 | 1 | 191 | 36 | 233 | 5.77e-42 | 157 |
| MS.gene062870.t1 | MTR_7g063040 | 35.586 | 222 | 110 | 10 | 312 | 524 | 286 | 483 | 1.15e-26 | 113 |
| MS.gene062870.t1 | MTR_1g096970 | 31.633 | 196 | 124 | 3 | 3 | 191 | 64 | 256 | 9.82e-18 | 86.7 |
| MS.gene062870.t1 | MTR_1g096970 | 29.054 | 148 | 91 | 2 | 381 | 518 | 269 | 412 | 1.11e-13 | 73.9 |
| MS.gene062870.t1 | MTR_3g097240 | 29.187 | 209 | 136 | 3 | 3 | 209 | 154 | 352 | 5.74e-16 | 80.5 |
| MS.gene062870.t1 | MTR_3g097240 | 29.187 | 209 | 136 | 3 | 3 | 209 | 154 | 352 | 7.26e-16 | 80.5 |
| MS.gene062870.t1 | MTR_3g097240 | 29.187 | 209 | 136 | 3 | 3 | 209 | 154 | 352 | 1.15e-15 | 80.5 |
| MS.gene062870.t1 | MTR_3g097240 | 30.882 | 136 | 77 | 4 | 383 | 507 | 359 | 488 | 7.33e-12 | 68.6 |
| MS.gene062870.t1 | MTR_1g025340 | 30.500 | 200 | 119 | 3 | 7 | 194 | 144 | 335 | 1.48e-15 | 80.1 |
| MS.gene062870.t1 | MTR_1g025340 | 29.870 | 154 | 89 | 4 | 380 | 520 | 345 | 492 | 6.36e-12 | 68.6 |
| MS.gene062870.t1 | MTR_3g114010 | 29.596 | 223 | 140 | 5 | 1 | 213 | 133 | 348 | 3.32e-15 | 79.0 |
| MS.gene062870.t1 | MTR_3g114010 | 31.646 | 158 | 93 | 3 | 380 | 526 | 340 | 493 | 7.18e-15 | 78.2 |
| MS.gene062870.t1 | MTR_8g095080 | 29.104 | 134 | 82 | 3 | 383 | 507 | 373 | 502 | 1.07e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062870.t1 | AT3G23160 | 56.937 | 555 | 159 | 9 | 1 | 552 | 54 | 531 | 0.0 | 610 |
| MS.gene062870.t1 | AT5G04550 | 34.975 | 589 | 306 | 12 | 1 | 541 | 37 | 596 | 1.27e-101 | 319 |
| MS.gene062870.t1 | AT5G04550 | 34.975 | 589 | 306 | 12 | 1 | 541 | 37 | 596 | 1.27e-101 | 319 |
| MS.gene062870.t1 | AT5G51670 | 49.425 | 174 | 82 | 2 | 357 | 526 | 289 | 460 | 5.76e-48 | 174 |
| MS.gene062870.t1 | AT5G51670 | 32.212 | 208 | 127 | 1 | 1 | 194 | 48 | 255 | 1.30e-25 | 110 |
| MS.gene062870.t1 | AT5G51670 | 49.425 | 174 | 82 | 2 | 357 | 526 | 289 | 460 | 5.76e-48 | 174 |
| MS.gene062870.t1 | AT5G51670 | 32.212 | 208 | 127 | 1 | 1 | 194 | 48 | 255 | 1.30e-25 | 110 |
| MS.gene062870.t1 | AT1G34320 | 30.303 | 198 | 126 | 4 | 3 | 191 | 168 | 362 | 5.33e-17 | 84.7 |
| MS.gene062870.t1 | AT1G34320 | 31.579 | 152 | 88 | 4 | 379 | 518 | 373 | 520 | 1.51e-14 | 77.0 |
| MS.gene062870.t1 | AT1G34320 | 30.303 | 198 | 126 | 4 | 3 | 191 | 168 | 362 | 5.33e-17 | 84.7 |
| MS.gene062870.t1 | AT1G34320 | 31.579 | 152 | 88 | 4 | 379 | 518 | 373 | 520 | 1.51e-14 | 77.0 |
| MS.gene062870.t1 | AT5G08660 | 31.973 | 147 | 83 | 4 | 383 | 518 | 372 | 512 | 5.60e-14 | 75.5 |
| MS.gene062870.t1 | AT5G08660 | 31.973 | 147 | 83 | 4 | 383 | 518 | 372 | 512 | 5.60e-14 | 75.5 |
| MS.gene062870.t1 | AT5G08660 | 31.973 | 147 | 83 | 4 | 383 | 518 | 372 | 512 | 5.60e-14 | 75.5 |
| MS.gene062870.t1 | AT1G30755 | 27.317 | 205 | 139 | 2 | 1 | 198 | 145 | 346 | 4.94e-13 | 71.6 |
| MS.gene062870.t1 | AT1G30755 | 27.317 | 205 | 139 | 2 | 1 | 198 | 145 | 346 | 6.28e-13 | 72.0 |
| MS.gene062870.t1 | AT1G30755 | 27.317 | 205 | 139 | 2 | 1 | 198 | 145 | 346 | 6.28e-13 | 72.0 |
| MS.gene062870.t1 | AT1G30755 | 27.317 | 205 | 139 | 2 | 1 | 198 | 145 | 346 | 6.28e-13 | 72.0 |
| MS.gene062870.t1 | AT1G30755 | 27.317 | 205 | 139 | 2 | 1 | 198 | 145 | 346 | 6.56e-13 | 71.2 |
| MS.gene062870.t1 | AT1G30755 | 27.317 | 205 | 139 | 2 | 1 | 198 | 145 | 346 | 6.56e-13 | 71.2 |
Find 0 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTTTGAAGATTGTA+TGG | - | 11215:7739-7758 | MS.gene062870:CDS | 20.0% |
| ! | ATTGGAAAGAAAATCTTGAT+GGG | - | 11215:7489-7508 | MS.gene062870:CDS | 25.0% |
| ! | TATGAGTTTGTATAGTGAAT+TGG | - | 11215:6476-6495 | MS.gene062870:CDS | 25.0% |
| !! | AAGATTTTCTTTCCAATCAT+GGG | + | 11215:7486-7505 | MS.gene062870:intergenic | 25.0% |
| !!! | AATGAATGTGGATTTTTTTC+TGG | - | 11215:6765-6784 | MS.gene062870:CDS | 25.0% |
| AAAACTATTGTTCCTCAAAG+CGG | + | 11215:6721-6740 | MS.gene06287:intergenic | 30.0% | |
| ATATGTAATTCAACCCAACA+AGG | + | 11215:7673-7692 | MS.gene062870:intergenic | 30.0% | |
| ATTTGAAGGATGTTTCTCTT+TGG | - | 11215:6610-6629 | MS.gene062870:CDS | 30.0% | |
| CATGTTTATAGTGACATTGT+TGG | - | 11215:6366-6385 | MS.gene062870:CDS | 30.0% | |
| CTCTATGACAATTATGACAT+TGG | + | 11215:7321-7340 | MS.gene062870:intergenic | 30.0% | |
| GAAGTTGTATGTCAAGAATT+TGG | - | 11215:7439-7458 | MS.gene062870:CDS | 30.0% | |
| GATTGGAAAGAAAATCTTGA+TGG | - | 11215:7488-7507 | MS.gene062870:CDS | 30.0% | |
| TTATTGATGTGAAGGAGTTA+GGG | - | 11215:6394-6413 | MS.gene062870:CDS | 30.0% | |
| TTGCACATAATATGATGAGA+TGG | - | 11215:7534-7553 | MS.gene062870:CDS | 30.0% | |
| TTGGAATCAGACATTTGATA+AGG | - | 11215:6629-6648 | MS.gene062870:CDS | 30.0% | |
| ! | AATTTGGTTTCATCTGATGA+AGG | - | 11215:6231-6250 | MS.gene062870:CDS | 30.0% |
| ! | CAAGATTTTCTTTCCAATCA+TGG | + | 11215:7487-7506 | MS.gene062870:intergenic | 30.0% |
| ! | CTTTTGAGCAGAAACTTTTA+TGG | - | 11215:6568-6587 | MS.gene062870:CDS | 30.0% |
| !! | ATTTTGAAGATTGTATGGAG+TGG | - | 11215:7744-7763 | MS.gene062870:CDS | 30.0% |
| !!! | TTTTTGGTTAAGCATATGGA+AGG | - | 11215:6417-6436 | MS.gene062870:CDS | 30.0% |
| AAAATCTTGATGGGATGCTT+CGG | - | 11215:7498-7517 | MS.gene062870:CDS | 35.0% | |
| AATGAGATCTTGAACACTGA+AGG | - | 11215:6201-6220 | MS.gene062870:CDS | 35.0% | |
| ACAACAGCAAAATGCATTGT+TGG | - | 11215:7703-7722 | MS.gene062870:CDS | 35.0% | |
| ATTAGTGTTCAGACGAATTC+AGG | - | 11215:6792-6811 | MS.gene062870:CDS | 35.0% | |
| CTCATCATATTATGTGCAAG+AGG | + | 11215:7533-7552 | MS.gene062870:intergenic | 35.0% | |
| GAACTAAGACAAGCTAAATC+CGG | - | 11215:7200-7219 | MS.gene062870:CDS | 35.0% | |
| GAGTTTGTATAGTGAATTGG+AGG | - | 11215:6479-6498 | MS.gene062870:CDS | 35.0% | |
| GCTAGAATTTCTGTGATCTT+CGG | - | 11215:6690-6709 | MS.gene062870:CDS | 35.0% | |
| GTTATTGATGTGAAGGAGTT+AGG | - | 11215:6393-6412 | MS.gene062870:CDS | 35.0% | |
| GTTTATAGTGACATTGTTGG+TGG | - | 11215:6369-6388 | MS.gene062870:CDS | 35.0% | |
| GTTTCAGAATAATCAGCATG+TGG | - | 11215:6533-6552 | MS.gene062870:CDS | 35.0% | |
| TAGAAACAACACTAGCAACA+CGG | + | 11215:6302-6321 | MS.gene062870:intergenic | 35.0% | |
| TTAGTGTTCAGACGAATTCA+GGG | - | 11215:6793-6812 | MS.gene062870:CDS | 35.0% | |
| ! | CCACATTCATTTTGCATAAC+CGG | + | 11215:6756-6775 | MS.gene062870:intergenic | 35.0% |
| ! | TGATAAGGTTGTTGAGTTGT+TGG | - | 11215:6644-6663 | MS.gene062870:CDS | 35.0% |
| !! | CACTGAAGGTGTTAAGAATT+TGG | - | 11215:6215-6234 | MS.gene062870:CDS | 35.0% |
| !! | TAAACGGCTAACCTACTTTT+CGG | + | 11215:7251-7270 | MS.gene062870:intergenic | 35.0% |
| !! | TTATCTTCTTGAGCTTGCTA+TGG | - | 11215:6254-6273 | MS.gene062870:CDS | 35.0% |
| !! | TTTAGCTTGTCTTAGTTCTC+CGG | + | 11215:7198-7217 | MS.gene062870:intergenic | 35.0% |
| !!! | AGGGTTTTTGGTTAAGCATA+TGG | - | 11215:6413-6432 | MS.gene062870:CDS | 35.0% |
| !!! | GCTTTGAGGAACAATAGTTT+TGG | - | 11215:6720-6739 | MS.gene062870:CDS | 35.0% |
| !!! | TTGAGGAACAATAGTTTTGG+TGG | - | 11215:6723-6742 | MS.gene062870:CDS | 35.0% |
| AAGCCTAAGGTTATCTCTCA+AGG | - | 11215:7409-7428 | MS.gene062870:CDS | 40.0% | |
| AGAGATAACCTTAGGCTTGT+TGG | + | 11215:7407-7426 | MS.gene062870:intergenic | 40.0% | |
| ATGGAGTGGCAATTACAATG+TGG | - | 11215:7758-7777 | MS.gene062870:CDS | 40.0% | |
| CAACGTTTAGTCCGAAAAGT+AGG | - | 11215:7237-7256 | MS.gene062870:CDS | 40.0% | |
| CAAGGAAAACCAAAATCCTC+AGG | + | 11215:6957-6976 | MS.gene062870:intergenic | 40.0% | |
| CATCTGATATAGATCATCCC+TGG | + | 11215:7381-7400 | MS.gene062870:intergenic | 40.0% | |
| CATTTGTCCTGCTAACTATC+TGG | + | 11215:7586-7605 | MS.gene062870:intergenic | 40.0% | |
| CCGGTTATGCAAAATGAATG+TGG | - | 11215:6753-6772 | MS.gene062870:CDS | 40.0% | |
| CGGTTATGTTATCAATCACG+AGG | - | 11215:7055-7074 | MS.gene062870:CDS | 40.0% | |
| CTTCGCTATCCTCATTTAGT+TGG | - | 11215:7347-7366 | MS.gene062870:CDS | 40.0% | |
| GAATGGTGAGGAAAATGGAT+AGG | - | 11215:6439-6458 | MS.gene062870:CDS | 40.0% | |
| GCAAGATGTGAGACATTTGA+AGG | - | 11215:6596-6615 | MS.gene062870:CDS | 40.0% | |
| GGTTAAGCATATGGAAGGAA+TGG | - | 11215:6422-6441 | MS.gene062870:CDS | 40.0% | |
| GTCCTAAGTCATGTTCAAAG+TGG | - | 11215:7161-7180 | MS.gene062870:CDS | 40.0% | |
| TGAGATCCATTTCTCTTGCT+TGG | + | 11215:6834-6853 | MS.gene062870:intergenic | 40.0% | |
| TGCGAATAGTAGCGTGAAAA+GGG | - | 11215:7118-7137 | MS.gene062870:CDS | 40.0% | |
| TTGCGAATAGTAGCGTGAAA+AGG | - | 11215:7117-7136 | MS.gene062870:CDS | 40.0% | |
| ! | AGCAGAAACTTTTATGGCAG+AGG | - | 11215:6574-6593 | MS.gene062870:CDS | 40.0% |
| ! | GTGGTGAATTAGCTTCTCTT+CGG | - | 11215:6931-6950 | MS.gene062870:CDS | 40.0% |
| ! | TGTGAAGGAGTTAGGGTTTT+TGG | - | 11215:6401-6420 | MS.gene062870:CDS | 40.0% |
| ! | TGTTGAAGGAGGAGCATAAA+CGG | + | 11215:7267-7286 | MS.gene062870:intergenic | 40.0% |
| ! | TTTCAGAGTCTGAGATCTCA+AGG | - | 11215:6172-6191 | MS.gene062870:CDS | 40.0% |
| ! | TTTTCCTTGTGGAACAAGTC+CGG | - | 11215:6968-6987 | MS.gene062870:CDS | 40.0% |
| !! | AGATTTGATGATGTCGACGA+CGG | - | 11215:7035-7054 | MS.gene062870:CDS | 40.0% |
| !! | ATTGGAGGTGTTGAATGAGT+TGG | - | 11215:6494-6513 | MS.gene062870:CDS | 40.0% |
| !! | GCTAGTGTTGTTTCTAGGTT+AGG | - | 11215:6306-6325 | MS.gene062870:CDS | 40.0% |
| !! | GTGTTGCTAGTGTTGTTTCT+AGG | - | 11215:6301-6320 | MS.gene062870:CDS | 40.0% |
| !! | TGGTGGTGTTATTGATGTGA+AGG | - | 11215:6386-6405 | MS.gene062870:CDS | 40.0% |
| !!! | AGGAACAATAGTTTTGGTGG+TGG | - | 11215:6726-6745 | MS.gene062870:CDS | 40.0% |
| !!! | GAGGATTTTGGTTTTCCTTG+TGG | - | 11215:6957-6976 | MS.gene062870:CDS | 40.0% |
| AAGAGAAATGGATCTCAGCC+GGG | - | 11215:6837-6856 | MS.gene062870:CDS | 45.0% | |
| AGATGCTACCAACAAGCCTA+AGG | - | 11215:7396-7415 | MS.gene062870:CDS | 45.0% | |
| AGCATATGGAAGGAATGGTG+AGG | - | 11215:6427-6446 | MS.gene062870:CDS | 45.0% | |
| CAAAGTGGCGTTTCGTTTAC+CGG | - | 11215:7176-7195 | MS.gene062870:CDS | 45.0% | |
| CAAGAGAAATGGATCTCAGC+CGG | - | 11215:6836-6855 | MS.gene062870:CDS | 45.0% | |
| CACTCCATAAAAAGTCTCCC+CGG | + | 11215:6990-7009 | MS.gene062870:intergenic | 45.0% | |
| CATGACTTAGGACACCTGAA+TGG | + | 11215:7154-7173 | MS.gene062870:intergenic | 45.0% | |
| CGATTTGCGATCTCCTTGTT+GGG | - | 11215:7657-7676 | MS.gene062870:CDS | 45.0% | |
| CGCAATCCAAGCAAGAGAAA+TGG | - | 11215:6825-6844 | MS.gene062870:CDS | 45.0% | |
| CTATCCTCATTTAGTTGGCG+AGG | - | 11215:7352-7371 | MS.gene062870:CDS | 45.0% | |
| CTTTCCAATCATGGGCAAGA+GGG | + | 11215:7478-7497 | MS.gene062870:intergenic | 45.0% | |
| GGAAGGAATGGTGAGGAAAA+TGG | - | 11215:6434-6453 | MS.gene062870:CDS | 45.0% | |
| TATGCTCCTCCTTCAACACT+TGG | - | 11215:7269-7288 | MS.gene062870:CDS | 45.0% | |
| TCGCCTTGAGAGATAACCTT+AGG | + | 11215:7415-7434 | MS.gene062870:intergenic | 45.0% | |
| TCTTTCCAATCATGGGCAAG+AGG | + | 11215:7479-7498 | MS.gene062870:intergenic | 45.0% | |
| TGCTCAAACCCTTGTAAAGC+AGG | + | 11215:6348-6367 | MS.gene062870:intergenic | 45.0% | |
| TTTCCAATCATGGGCAAGAG+GGG | + | 11215:7477-7496 | MS.gene062870:intergenic | 45.0% | |
| TTTCCTTGTGGAACAAGTCC+GGG | - | 11215:6969-6988 | MS.gene062870:CDS | 45.0% | |
| ! | AAGTCCGGGGAGACTTTTTA+TGG | - | 11215:6983-7002 | MS.gene062870:CDS | 45.0% |
| ! | AGGTTGTTGAGTTGTTGGCT+AGG | - | 11215:6649-6668 | MS.gene062870:CDS | 45.0% |
| ! | CGCCACTTTGAACATGACTT+AGG | + | 11215:7166-7185 | MS.gene062870:intergenic | 45.0% |
| ! | GTTCTGAGCCTGCTTTACAA+GGG | - | 11215:6337-6356 | MS.gene062870:CDS | 45.0% |
| ! | TCGATTTGCGATCTCCTTGT+TGG | - | 11215:7656-7675 | MS.gene062870:CDS | 45.0% |
| ! | TGTTCTGAGCCTGCTTTACA+AGG | - | 11215:6336-6355 | MS.gene062870:CDS | 45.0% |
| !! | AGGGAGCATTTGTTCCATTC+AGG | - | 11215:7137-7156 | MS.gene062870:CDS | 45.0% |
| AATGCCTGCAGTGCAGAGAA+GGG | - | 11215:6872-6891 | MS.gene062870:CDS | 50.0% | |
| AGCAGCACCAGATAGTTAGC+AGG | - | 11215:7576-7595 | MS.gene062870:CDS | 50.0% | |
| ATCTTGATGGGATGCTTCGG+TGG | - | 11215:7501-7520 | MS.gene062870:CDS | 50.0% | |
| ATTTAGTTGGCGAGGAAGCC+AGG | - | 11215:7360-7379 | MS.gene062870:CDS | 50.0% | |
| CATGTATCTAGCAGTCGCAG+TGG | - | 11215:7089-7108 | MS.gene062870:CDS | 50.0% | |
| CCACTTCTCATGTCAATCCG+AGG | + | 11215:6915-6934 | MS.gene062870:intergenic | 50.0% | |
| CCTCGGATTGACATGAGAAG+TGG | - | 11215:6912-6931 | MS.gene062870:CDS | 50.0% | |
| CGTTGAGCAACTTTGTACGC+CGG | + | 11215:7222-7241 | MS.gene062870:intergenic | 50.0% | |
| GCTTCCTCGCCAACTAAATG+AGG | + | 11215:7359-7378 | MS.gene062870:intergenic | 50.0% | |
| GGCATTCTTGCAACTGAACC+CGG | + | 11215:6858-6877 | MS.gene062870:intergenic | 50.0% | |
| TCTTCGGTGAAACCGCTTTG+AGG | - | 11215:6706-6725 | MS.gene062870:CDS | 50.0% | |
| TTCCTTGTGGAACAAGTCCG+GGG | - | 11215:6970-6989 | MS.gene062870:CDS | 50.0% | |
| TTTAGTTGGCGAGGAAGCCA+GGG | - | 11215:7361-7380 | MS.gene062870:CDS | 50.0% | |
| ! | ATTAGCTTCTCTTCGGCCTG+AGG | - | 11215:6938-6957 | MS.gene062870:CDS | 50.0% |
| ! | GAGATCGCAAATCGACTCCT+CGG | + | 11215:7651-7670 | MS.gene062870:intergenic | 50.0% |
| ! | TCTCTTCGGCCTGAGGATTT+TGG | - | 11215:6945-6964 | MS.gene062870:CDS | 50.0% |
| !!! | TAGTTTTGGTGGTGGTTCGC+CGG | - | 11215:6734-6753 | MS.gene062870:CDS | 50.0% |
| ATGCCTGCAGTGCAGAGAAG+GGG | - | 11215:6873-6892 | MS.gene062870:CDS | 55.0% | |
| GAATGCCTGCAGTGCAGAGA+AGG | - | 11215:6871-6890 | MS.gene062870:CDS | 55.0% | |
| GAGGAGCTGCTAGTAAGCCT+CGG | - | 11215:6895-6914 | MS.gene062870:CDS | 55.0% | |
| GCTCCTCCTTCAACACTTGG+TGG | - | 11215:7272-7291 | MS.gene062870:CDS | 55.0% | |
| TCGACTCCTCGGTCTTCTCA+CGG | + | 11215:7640-7659 | MS.gene062870:intergenic | 55.0% | |
| !! | GAGCCACCAAGTGTTGAAGG+AGG | + | 11215:7278-7297 | MS.gene062870:intergenic | 55.0% |
| !! | GCTGAGCCACCAAGTGTTGA+AGG | + | 11215:7281-7300 | MS.gene062870:intergenic | 55.0% |
| !! | GGCAAGAGGGGCGTCATATA+TGG | + | 11215:7465-7484 | MS.gene062870:intergenic | 55.0% |
| ACGCCCCTCTTGCCCATGAT+TGG | - | 11215:7471-7490 | MS.gene062870:CDS | 60.0% | |
| CTCCTCGGTCTTCTCACGGT+CGG | + | 11215:7636-7655 | MS.gene062870:intergenic | 60.0% | |
| ! | CTCCCCGGACTTGTTCCACA+AGG | + | 11215:6975-6994 | MS.gene062870:intergenic | 60.0% |
| CCTCCCCTTCTCTGCACTGC+AGG | + | 11215:6879-6898 | MS.gene062870:intergenic | 65.0% | |
| CCTGCAGTGCAGAGAAGGGG+AGG | - | 11215:6876-6895 | MS.gene062870:CDS | 65.0% | |
| CGCCGACCGTGAGAAGACCG+AGG | - | 11215:7631-7650 | MS.gene062870:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 11215 | gene | 6141 | 7799 | 6141 | ID=MS.gene062870 |
| 11215 | mRNA | 6141 | 7799 | 6141 | ID=MS.gene062870.t1;Parent=MS.gene062870 |
| 11215 | exon | 6141 | 7799 | 6141 | ID=MS.gene062870.t1.exon1;Parent=MS.gene062870.t1 |
| 11215 | CDS | 6141 | 7799 | 6141 | ID=cds.MS.gene062870.t1;Parent=MS.gene062870.t1 |
| Gene Sequence |
| Protein sequence |
