Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056834.t1 | XP_013444776.1 | 97.9 | 480 | 10 | 0 | 1 | 480 | 1 | 480 | 1.50E-279 | 971.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056834.t1 | Q9MB95 | 72.2 | 482 | 119 | 5 | 10 | 479 | 12 | 490 | 4.6e-205 | 715.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056834.t1 | A0A072TNM7 | 97.9 | 480 | 10 | 0 | 1 | 480 | 1 | 480 | 1.1e-279 | 971.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049452 | MS.gene056834 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene056834 | 0.816987 | 4.16E-52 | -1.69E-46 |
| MS.gene056834 | MS.gene057208 | 0.833441 | 5.32E-56 | -1.69E-46 |
| MS.gene056834 | MS.gene062870 | 0.824689 | 7.05E-54 | -1.69E-46 |
| MS.gene056834 | MS.gene06643 | 0.835732 | 1.41E-56 | -1.69E-46 |
| MS.gene056834 | MS.gene066511 | 0.808737 | 2.67E-50 | -1.69E-46 |
| MS.gene056834 | MS.gene06857 | 0.845317 | 4.38E-59 | -1.69E-46 |
| MS.gene056834 | MS.gene069519 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene056834 | MS.gene070140 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene072153 | 0.834124 | 3.59E-56 | -1.69E-46 |
| MS.gene056834 | MS.gene22705 | 0.821904 | 3.15E-53 | -1.69E-46 |
| MS.gene056834 | MS.gene27997 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene056834 | MS.gene31305 | 0.809225 | 2.10E-50 | -1.69E-46 |
| MS.gene056834 | MS.gene34508 | 0.802762 | 4.81E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene36571 | 0.836948 | 6.94E-57 | -1.69E-46 |
| MS.gene056834 | MS.gene46128 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene54377 | 0.825596 | 4.30E-54 | -1.69E-46 |
| MS.gene056834 | MS.gene54380 | 0.820335 | 7.24E-53 | -1.69E-46 |
| MS.gene056834 | MS.gene57360 | 0.817062 | 4.01E-52 | -1.69E-46 |
| MS.gene056834 | MS.gene58502 | 0.80682 | 6.83E-50 | -1.69E-46 |
| MS.gene056834 | MS.gene61494 | 0.80816 | 3.55E-50 | -1.69E-46 |
| MS.gene056834 | MS.gene65095 | 0.812528 | 4.05E-51 | -1.69E-46 |
| MS.gene056834 | MS.gene65512 | 0.826906 | 2.10E-54 | -1.69E-46 |
| MS.gene056834 | MS.gene67007 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene056834 | MS.gene67662 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene71597 | 0.805077 | 1.59E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene71945 | 0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene056834 | MS.gene77356 | 0.805867 | 1.09E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene77361 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene056834 | MS.gene79925 | 0.922253 | 1.25E-88 | -1.69E-46 |
| MS.gene056834 | MS.gene84186 | 0.801973 | 6.99E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene85936 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene056834 | MS.gene86455 | 0.800322 | 1.52E-48 | -1.69E-46 |
| MS.gene056834 | MS.gene92101 | 0.850858 | 1.29E-60 | -1.69E-46 |
| MS.gene056834 | MS.gene94674 | 0.813563 | 2.40E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056834 | MS.gene049021 | PPI |
| MS.gene056834 | MS.gene66343 | PPI |
| MS.gene66342 | MS.gene056834 | PPI |
| MS.gene030294 | MS.gene056834 | PPI |
| MS.gene056834 | MS.gene20160 | PPI |
| MS.gene065184 | MS.gene056834 | PPI |
| MS.gene049022 | MS.gene056834 | PPI |
| MS.gene056834 | MS.gene031398 | PPI |
| MS.gene056834 | MS.gene55882 | PPI |
| MS.gene056834 | MS.gene75059 | PPI |
| MS.gene056834 | MS.gene63294 | PPI |
| MS.gene056834 | MS.gene55883 | PPI |
| MS.gene056834 | MS.gene06177 | PPI |
| MS.gene059852 | MS.gene056834 | PPI |
| MS.gene008145 | MS.gene056834 | PPI |
| MS.gene056834 | MS.gene06176 | PPI |
| MS.gene63500 | MS.gene056834 | PPI |
| MS.gene20161 | MS.gene056834 | PPI |
| MS.gene056834 | MS.gene62175 | PPI |
| MS.gene064035 | MS.gene056834 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056834.t1 | MTR_8g028600 | 97.917 | 480 | 10 | 0 | 1 | 480 | 1 | 480 | 0.0 | 987 |
| MS.gene056834.t1 | MTR_7g079080 | 79.545 | 484 | 95 | 3 | 1 | 480 | 1 | 484 | 0.0 | 784 |
| MS.gene056834.t1 | MTR_8g098930 | 65.625 | 480 | 154 | 3 | 9 | 480 | 10 | 486 | 0.0 | 679 |
| MS.gene056834.t1 | MTR_7g079080 | 78.100 | 379 | 79 | 3 | 106 | 480 | 1 | 379 | 0.0 | 590 |
| MS.gene056834.t1 | MTR_6g091760 | 56.481 | 432 | 186 | 2 | 11 | 441 | 14 | 444 | 0.0 | 528 |
| MS.gene056834.t1 | MTR_4g097540 | 53.089 | 437 | 195 | 2 | 9 | 435 | 2 | 438 | 0.0 | 517 |
| MS.gene056834.t1 | MTR_8g101750 | 55.012 | 429 | 185 | 2 | 11 | 438 | 12 | 433 | 0.0 | 514 |
| MS.gene056834.t1 | MTR_3g103550 | 53.991 | 426 | 191 | 2 | 10 | 430 | 1 | 426 | 7.00e-178 | 508 |
| MS.gene056834.t1 | MTR_5g015020 | 53.349 | 433 | 193 | 3 | 9 | 432 | 2 | 434 | 1.66e-177 | 506 |
| MS.gene056834.t1 | MTR_8g101820 | 51.748 | 429 | 186 | 4 | 11 | 438 | 12 | 420 | 4.18e-163 | 468 |
| MS.gene056834.t1 | MTR_6g463260 | 42.005 | 419 | 242 | 1 | 11 | 428 | 104 | 522 | 1.23e-129 | 386 |
| MS.gene056834.t1 | MTR_5g011400 | 39.609 | 409 | 246 | 1 | 23 | 430 | 84 | 492 | 1.76e-116 | 352 |
| MS.gene056834.t1 | MTR_8g021970 | 48.361 | 122 | 29 | 2 | 231 | 352 | 10 | 97 | 7.04e-27 | 104 |
| MS.gene056834.t1 | MTR_2g090730 | 51.111 | 90 | 40 | 1 | 65 | 154 | 13 | 98 | 1.13e-26 | 107 |
| MS.gene056834.t1 | MTR_2g090615 | 22.126 | 348 | 239 | 11 | 94 | 430 | 86 | 412 | 4.59e-13 | 71.2 |
| MS.gene056834.t1 | MTR_5g033230 | 23.729 | 177 | 130 | 4 | 86 | 260 | 100 | 273 | 5.36e-13 | 71.2 |
| MS.gene056834.t1 | MTR_5g033230 | 23.729 | 177 | 130 | 4 | 86 | 260 | 100 | 273 | 5.46e-13 | 71.2 |
| MS.gene056834.t1 | MTR_8g023140 | 23.284 | 335 | 232 | 11 | 119 | 430 | 182 | 514 | 5.91e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056834.t1 | AT3G61510 | 64.789 | 497 | 148 | 5 | 1 | 479 | 1 | 488 | 0.0 | 667 |
| MS.gene056834.t1 | AT1G01480 | 62.903 | 496 | 160 | 5 | 4 | 479 | 5 | 496 | 0.0 | 647 |
| MS.gene056834.t1 | AT4G11280 | 63.248 | 468 | 159 | 4 | 6 | 460 | 10 | 477 | 0.0 | 617 |
| MS.gene056834.t1 | AT4G37770 | 57.512 | 426 | 177 | 1 | 10 | 431 | 3 | 428 | 0.0 | 530 |
| MS.gene056834.t1 | AT4G08040 | 53.761 | 452 | 197 | 3 | 10 | 449 | 1 | 452 | 0.0 | 523 |
| MS.gene056834.t1 | AT4G26200 | 57.343 | 429 | 180 | 2 | 11 | 436 | 18 | 446 | 0.0 | 523 |
| MS.gene056834.t1 | AT2G22810 | 54.734 | 433 | 191 | 2 | 11 | 438 | 4 | 436 | 5.22e-177 | 505 |
| MS.gene056834.t1 | AT3G49700 | 53.793 | 435 | 193 | 2 | 11 | 439 | 4 | 436 | 6.93e-175 | 499 |
| MS.gene056834.t1 | AT5G65800 | 54.098 | 427 | 191 | 2 | 9 | 431 | 3 | 428 | 2.35e-174 | 498 |
| MS.gene056834.t1 | AT1G01480 | 61.929 | 394 | 126 | 5 | 106 | 479 | 1 | 390 | 2.70e-172 | 490 |
| MS.gene056834.t1 | AT5G51690 | 41.278 | 407 | 238 | 1 | 23 | 428 | 81 | 487 | 2.18e-122 | 367 |
| MS.gene056834.t1 | AT1G62960 | 39.467 | 413 | 241 | 6 | 19 | 428 | 141 | 547 | 1.04e-107 | 331 |
| MS.gene056834.t1 | AT5G51690 | 41.643 | 353 | 206 | 0 | 76 | 428 | 12 | 364 | 2.98e-107 | 323 |
| MS.gene056834.t1 | AT1G72330 | 24.107 | 336 | 232 | 9 | 117 | 430 | 196 | 530 | 4.28e-16 | 81.3 |
| MS.gene056834.t1 | AT1G23310 | 26.554 | 177 | 125 | 4 | 86 | 260 | 100 | 273 | 1.12e-15 | 79.7 |
| MS.gene056834.t1 | AT1G23310 | 26.554 | 177 | 125 | 4 | 86 | 260 | 100 | 273 | 1.35e-15 | 79.3 |
| MS.gene056834.t1 | AT1G17290 | 24.036 | 337 | 231 | 11 | 117 | 430 | 199 | 533 | 2.51e-14 | 75.9 |
| MS.gene056834.t1 | AT1G72330 | 26.667 | 210 | 146 | 6 | 117 | 319 | 196 | 404 | 2.99e-14 | 75.1 |
| MS.gene056834.t1 | AT4G23600 | 23.913 | 368 | 232 | 13 | 94 | 442 | 78 | 416 | 6.44e-14 | 73.9 |
| MS.gene056834.t1 | AT1G72330 | 22.923 | 349 | 233 | 9 | 117 | 430 | 196 | 543 | 6.64e-14 | 74.3 |
| MS.gene056834.t1 | AT1G70580 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 8.05e-14 | 73.9 |
| MS.gene056834.t1 | AT1G70580 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 8.05e-14 | 73.9 |
| MS.gene056834.t1 | AT1G70580 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 8.05e-14 | 73.9 |
| MS.gene056834.t1 | AT1G70580 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 8.05e-14 | 73.9 |
| MS.gene056834.t1 | AT4G23600 | 24.189 | 339 | 211 | 12 | 123 | 442 | 1 | 312 | 2.97e-12 | 68.2 |
| MS.gene056834.t1 | AT1G77670 | 23.729 | 354 | 234 | 15 | 93 | 439 | 116 | 440 | 3.85e-12 | 68.6 |
| MS.gene056834.t1 | AT4G28420 | 20.556 | 360 | 244 | 10 | 94 | 437 | 103 | 436 | 1.21e-11 | 67.0 |
| MS.gene056834.t1 | AT5G53970 | 21.271 | 362 | 241 | 13 | 94 | 438 | 76 | 410 | 1.35e-11 | 66.6 |
Find 100 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAGGTTGGTTGGTTTA+GGG | 0.190705 | 8.4:-67077806 | MS.gene056834:CDS |
| GAAGACAACATCAATGTAAA+AGG | 0.199753 | 8.4:-67078432 | MS.gene056834:CDS |
| GTTCGAGAAGGTTGTTAAAA+AGG | 0.241887 | 8.4:-67078017 | MS.gene056834:CDS |
| AACTATATTAAACATGAGTT+TGG | 0.249029 | 8.4:-67080960 | None:intergenic |
| GCTCTGAGGTTGGTTGGTTT+AGG | 0.251907 | 8.4:-67077807 | MS.gene056834:CDS |
| AGATTTCATCACAAACTAAA+TGG | 0.259841 | 8.4:+67078316 | None:intergenic |
| GTGAAGCTAAGACTTAAATT+TGG | 0.263791 | 8.4:+67077676 | None:intergenic |
| CTTTAGTGTCTCTTTGTCTA+AGG | 0.264938 | 8.4:+67078371 | None:intergenic |
| TTGTCTAAGGTTGTACCTAA+TGG | 0.267027 | 8.4:+67078384 | None:intergenic |
| TCTTGTTATCTTGAAGTTGT+TGG | 0.286651 | 8.4:+67078488 | None:intergenic |
| CAAAGGATAAGAGTATTTAT+AGG | 0.307066 | 8.4:-67077739 | MS.gene056834:CDS |
| TTGGTCATTGGTTGCAATCT+TGG | 0.315539 | 8.4:+67080913 | None:intergenic |
| TTGATGAGTGGAGGGGCAAC+AGG | 0.323585 | 8.4:-67080281 | MS.gene056834:CDS |
| ACTATATTAAACATGAGTTT+GGG | 0.323778 | 8.4:-67080959 | None:intergenic |
| CTGAACTTACACACTCCTTC+TGG | 0.332505 | 8.4:+67080551 | None:intergenic |
| GCTTTCCACCCATCAAAATA+TGG | 0.339867 | 8.4:+67080875 | None:intergenic |
| TGTCTAAGGTTGTACCTAAT+GGG | 0.346338 | 8.4:+67078385 | None:intergenic |
| AAAGGATAAGAGTATTTATA+GGG | 0.354733 | 8.4:-67077738 | MS.gene056834:CDS |
| TATAGTTTATCAAAAGACTT+AGG | 0.366855 | 8.4:-67078201 | MS.gene056834:CDS |
| GGAAGGAAAATGTCAAGCTT+TGG | 0.368075 | 8.4:-67078120 | MS.gene056834:CDS |
| CAGAAGGAGTGTGTAAGTTC+AGG | 0.392726 | 8.4:-67080550 | MS.gene056834:CDS |
| TAAGTCTTAGCTTCACTTCA+AGG | 0.396222 | 8.4:-67077669 | MS.gene056834:CDS |
| GCTAACTTTCAAGACTATCA+TGG | 0.397089 | 8.4:-67080521 | MS.gene056834:CDS |
| CATGCATACCCTGGATAGTA+AGG | 0.402804 | 8.4:+67080197 | None:intergenic |
| TGGAGTGCAAATTGAAGCCT+TGG | 0.407080 | 8.4:+67080571 | None:intergenic |
| TTGAAGAAGAGTTGAAGCTT+TGG | 0.411415 | 8.4:-67077885 | MS.gene056834:CDS |
| CCCCTCCACTCATCAATATA+CGG | 0.413279 | 8.4:+67080288 | None:intergenic |
| TTAATTGCTCTGAGGTTGGT+TGG | 0.417602 | 8.4:-67077813 | MS.gene056834:CDS |
| GATGGGTCTTGCTGAAAATC+AGG | 0.425500 | 8.4:-67080801 | MS.gene056834:intron |
| ACAAACCCCTCCAACCCATT+AGG | 0.442463 | 8.4:-67078399 | MS.gene056834:CDS |
| GTTCCTACCCCTTACTATCC+AGG | 0.452819 | 8.4:-67080206 | MS.gene056834:CDS |
| GCTTTGATCTGATTGAAGAA+TGG | 0.457254 | 8.4:-67080607 | MS.gene056834:CDS |
| CCACTCATCAATATACGGTT+AGG | 0.463785 | 8.4:+67080293 | None:intergenic |
| CTAACTTTCAAGACTATCAT+GGG | 0.476455 | 8.4:-67080520 | MS.gene056834:CDS |
| ATAGTTTATCAAAAGACTTA+GGG | 0.480641 | 8.4:-67078200 | MS.gene056834:CDS |
| TGCTAATATTGATGATGAAA+CGG | 0.483936 | 8.4:-67077776 | MS.gene056834:CDS |
| TCAAAAGACTTAGGGTTCCC+TGG | 0.484527 | 8.4:-67078192 | MS.gene056834:CDS |
| TCACTAACACTTACATAGCT+TGG | 0.485073 | 8.4:+67078270 | None:intergenic |
| TGACTTGTGTTGGAGAACTA+AGG | 0.488847 | 8.4:-67078541 | MS.gene056834:CDS |
| GGAACTAGAAAAGCATCTCC+TGG | 0.491345 | 8.4:+67080224 | None:intergenic |
| AGAAGGAGTGTGTAAGTTCA+GGG | 0.496417 | 8.4:-67080549 | MS.gene056834:CDS |
| TGTCAAAAGTGAGAGGTGGT+AGG | 0.500843 | 8.4:-67080328 | MS.gene056834:CDS |
| TCCTCAGGGTGTAATTCAGA+TGG | 0.501420 | 8.4:-67080819 | MS.gene056834:CDS |
| GGAGTGCAAATTGAAGCCTT+GGG | 0.507315 | 8.4:+67080572 | None:intergenic |
| GTCAAAAGTGAGAGGTGGTA+GGG | 0.523966 | 8.4:-67080327 | MS.gene056834:CDS |
| AAGACAACATCAATGTAAAA+GGG | 0.526004 | 8.4:-67078431 | MS.gene056834:CDS |
| GTTGTACCTAATGGGTTGGA+GGG | 0.531299 | 8.4:+67078393 | None:intergenic |
| AGTCGATTTCCAAGTAATGC+GGG | 0.535799 | 8.4:-67077955 | MS.gene056834:CDS |
| AGGCATGACAAATTTACAAA+GGG | 0.543731 | 8.4:-67077997 | MS.gene056834:CDS |
| GATTCGTCCGTGACTTGTGT+TGG | 0.550678 | 8.4:-67078551 | MS.gene056834:CDS |
| GGTTGTACCTAATGGGTTGG+AGG | 0.552038 | 8.4:+67078392 | None:intergenic |
| GGTGAAGCTTAATGTGTCAC+CGG | 0.558827 | 8.4:-67077845 | MS.gene056834:CDS |
| GTGCTTACACTTGTAAACTC+TGG | 0.560597 | 8.4:+67080494 | None:intergenic |
| GTGAAGCTTAATGTGTCACC+GGG | 0.563590 | 8.4:-67077844 | MS.gene056834:CDS |
| TAAGGTTGTACCTAATGGGT+TGG | 0.564708 | 8.4:+67078389 | None:intergenic |
| GCTTCAATTTGCACTCCAGA+AGG | 0.564795 | 8.4:-67080566 | MS.gene056834:CDS |
| TGATGAGTGGAGGGGCAACA+GGG | 0.568770 | 8.4:-67080280 | MS.gene056834:CDS |
| ACCGTATATTGATGAGTGGA+GGG | 0.569539 | 8.4:-67080289 | MS.gene056834:CDS |
| TAATTTACTCCATATTCATG+TGG | 0.571162 | 8.4:+67077576 | None:intergenic |
| AACCGTATATTGATGAGTGG+AGG | 0.572345 | 8.4:-67080290 | MS.gene056834:CDS |
| TTGGCATGTTATTATCAATG+AGG | 0.573325 | 8.4:-67077866 | MS.gene056834:CDS |
| CTATCCCAACCCTAAAACCA+GGG | 0.576951 | 8.4:+67078175 | None:intergenic |
| TTCCTACCCCTTACTATCCA+GGG | 0.577112 | 8.4:-67080205 | MS.gene056834:intron |
| CGGTGGAAATTGCATTGCAA+AGG | 0.577450 | 8.4:-67077756 | MS.gene056834:CDS |
| AAATGATGTGAATGAGATCA+AGG | 0.578893 | 8.4:+67078223 | None:intergenic |
| ATTCATGTGGCTCGAACAAG+TGG | 0.579438 | 8.4:+67077589 | None:intergenic |
| TTGGAGCTATCACAATGGAC+AGG | 0.589745 | 8.4:+67078507 | None:intergenic |
| ACTATCCCAACCCTAAAACC+AGG | 0.592159 | 8.4:+67078174 | None:intergenic |
| AATGATCAAGTGGTGAATTG+TGG | 0.596988 | 8.4:-67078141 | MS.gene056834:CDS |
| AAGGCATGACAAATTTACAA+AGG | 0.599045 | 8.4:-67077998 | MS.gene056834:CDS |
| ATTTACAAAGGGACTCGAAG+AGG | 0.604697 | 8.4:-67077986 | MS.gene056834:CDS |
| TAGTCGATTTCCAAGTAATG+CGG | 0.607200 | 8.4:-67077956 | MS.gene056834:CDS |
| TTATTCATACAATGATCAAG+TGG | 0.611105 | 8.4:-67078151 | MS.gene056834:CDS |
| TAGTTCTCCAACACAAGTCA+CGG | 0.615746 | 8.4:+67078544 | None:intergenic |
| ATGCATACCCTGGATAGTAA+GGG | 0.617487 | 8.4:+67080198 | None:intergenic |
| CCTCAGGGTGTAATTCAGAT+GGG | 0.625600 | 8.4:-67080818 | MS.gene056834:CDS |
| GATGAGTGGAGGGGCAACAG+GGG | 0.627412 | 8.4:-67080279 | MS.gene056834:CDS |
| CTATATTAAACATGAGTTTG+GGG | 0.629964 | 8.4:-67080958 | None:intergenic |
| ATCAAGTGGTGAATTGTGGA+AGG | 0.630178 | 8.4:-67078137 | MS.gene056834:CDS |
| ATGGATAAAGAATAATCCCA+AGG | 0.631217 | 8.4:-67080588 | MS.gene056834:CDS |
| GCTCGAACAAGTGGTGAATG+AGG | 0.631372 | 8.4:+67077598 | None:intergenic |
| TGCATACCCTGGATAGTAAG+GGG | 0.636973 | 8.4:+67080199 | None:intergenic |
| CCTAACCGTATATTGATGAG+TGG | 0.638816 | 8.4:-67080293 | MS.gene056834:CDS |
| TTGTACCTAATGGGTTGGAG+GGG | 0.640699 | 8.4:+67078394 | None:intergenic |
| AGAAAGTTGAAGTCAAACGT+TGG | 0.643437 | 8.4:-67077702 | MS.gene056834:CDS |
| TACCCTGGATAGTAAGGGGT+AGG | 0.644778 | 8.4:+67080203 | None:intergenic |
| TTTATGTCAAAAGTGAGAGG+TGG | 0.645613 | 8.4:-67080332 | MS.gene056834:CDS |
| GATATGATTATGTGATTGTG+AGG | 0.657848 | 8.4:+67077622 | None:intergenic |
| AAATTTATGTCAAAAGTGAG+AGG | 0.659568 | 8.4:-67080335 | MS.gene056834:CDS |
| TGATGAAATCTATGCAGCCA+CGG | 0.662191 | 8.4:-67078304 | MS.gene056834:CDS |
| AACACTTACATAGCTTGGCG+AGG | 0.665335 | 8.4:+67078275 | None:intergenic |
| CCGTATATTGATGAGTGGAG+GGG | 0.666921 | 8.4:-67080288 | MS.gene056834:CDS |
| GTCTTAGCTTCACTTCAAGG+AGG | 0.672185 | 8.4:-67077666 | MS.gene056834:CDS |
| CCCATCTGAATTACACCCTG+AGG | 0.694079 | 8.4:+67080818 | None:intergenic |
| GAGCAATTAAAAGAAGACCC+CGG | 0.703258 | 8.4:+67077826 | None:intergenic |
| ATTGCAACCAATGACCAACA+TGG | 0.703855 | 8.4:-67080908 | MS.gene056834:CDS |
| AGTTGTTGGAGCTATCACAA+TGG | 0.715860 | 8.4:+67078502 | None:intergenic |
| GCTTGGCGAGGTGAAAACCG+TGG | 0.728173 | 8.4:+67078287 | None:intergenic |
| TAATATTGATGATGAAACGG+TGG | 0.738048 | 8.4:-67077773 | MS.gene056834:CDS |
| TGAAGCTTAATGTGTCACCG+GGG | 0.797341 | 8.4:-67077843 | MS.gene056834:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAACTAATATAATGATT+GGG | - | chr8.4:67078113-67078132 | MS.gene056834:CDS | 10.0% |
| !! | TAATAAACTAATATAATGAT+TGG | - | chr8.4:67078112-67078131 | MS.gene056834:CDS | 10.0% |
| !! | TATTAAAATTATGAAAGAAA+AGG | + | chr8.4:67078369-67078388 | None:intergenic | 10.0% |
| !! | ATTTGAAAAACAAAATCATA+AGG | - | chr8.4:67079185-67079204 | MS.gene056834:intron | 15.0% |
| !! | TTAAAAAAAATCATATGATG+AGG | + | chr8.4:67079809-67079828 | None:intergenic | 15.0% |
| !! | TTATATTCTTTGTATAAAGT+TGG | + | chr8.4:67078871-67078890 | None:intergenic | 15.0% |
| !!! | ATCAAATGAATAATTTTGAT+TGG | + | chr8.4:67078964-67078983 | None:intergenic | 15.0% |
| !!! | TGATTTTGTTTTTCAAATTA+CGG | + | chr8.4:67079183-67079202 | None:intergenic | 15.0% |
| !! | AAGAAAGGAATATATCATAA+AGG | - | chr8.4:67079286-67079305 | MS.gene056834:intron | 20.0% |
| !! | ATAGTTTATCAAAAGACTTA+GGG | - | chr8.4:67080338-67080357 | MS.gene056834:CDS | 20.0% |
| !! | TATAGTTTATCAAAAGACTT+AGG | - | chr8.4:67080337-67080356 | MS.gene056834:CDS | 20.0% |
| !! | TTGAGATAGAAATATATAGA+GGG | - | chr8.4:67079223-67079242 | MS.gene056834:intron | 20.0% |
| !!! | AAAATTCTCCATATTTTGAT+GGG | - | chr8.4:67077655-67077674 | MS.gene056834:CDS | 20.0% |
| !!! | AAAGGATAAGAGTATTTATA+GGG | - | chr8.4:67080800-67080819 | MS.gene056834:intron | 20.0% |
| !!! | ATGTTCATTTTAAATGCTAT+TGG | + | chr8.4:67078796-67078815 | None:intergenic | 20.0% |
| !!! | TTGATTATATATTGTTTCTC+AGG | - | chr8.4:67078172-67078191 | MS.gene056834:CDS | 20.0% |
| !!! | TTGGGTATATTTTTGTATAT+TGG | - | chr8.4:67078131-67078150 | MS.gene056834:CDS | 20.0% |
| ! | AAATATGTCACACAAATGAA+AGG | + | chr8.4:67079614-67079633 | None:intergenic | 25.0% |
| ! | AAATTTATGTCAAAAGTGAG+AGG | - | chr8.4:67078203-67078222 | MS.gene056834:CDS | 25.0% |
| ! | AAGACAACATCAATGTAAAA+GGG | - | chr8.4:67080107-67080126 | MS.gene056834:intron | 25.0% |
| ! | AGATTTCATCACAAACTAAA+TGG | + | chr8.4:67080225-67080244 | None:intergenic | 25.0% |
| ! | ATAACTATTCCATCAACAAA+AGG | - | chr8.4:67078887-67078906 | MS.gene056834:intron | 25.0% |
| ! | GAACTTGAAAAAATTGCTTA+AGG | - | chr8.4:67080621-67080640 | MS.gene056834:intron | 25.0% |
| ! | GAGTTACACTCAATAAAATT+TGG | + | chr8.4:67077842-67077861 | None:intergenic | 25.0% |
| ! | GTGTCAAACTTAATTGATAA+GGG | + | chr8.4:67078436-67078455 | None:intergenic | 25.0% |
| ! | GTTGAGATAGAAATATATAG+AGG | - | chr8.4:67079222-67079241 | MS.gene056834:intron | 25.0% |
| ! | TGTGTCAAACTTAATTGATA+AGG | + | chr8.4:67078437-67078456 | None:intergenic | 25.0% |
| ! | TTATTCATACAATGATCAAG+TGG | - | chr8.4:67080387-67080406 | MS.gene056834:intron | 25.0% |
| !!! | CAAAGGATAAGAGTATTTAT+AGG | - | chr8.4:67080799-67080818 | MS.gene056834:intron | 25.0% |
| !!! | CATTTGTGTGACATATTTTT+TGG | - | chr8.4:67079616-67079635 | MS.gene056834:intron | 25.0% |
| !!! | GAAAATTCTCCATATTTTGA+TGG | - | chr8.4:67077654-67077673 | MS.gene056834:CDS | 25.0% |
| !!! | TGCTAATATTGATGATGAAA+CGG | - | chr8.4:67080762-67080781 | MS.gene056834:intron | 25.0% |
| AAAAAAACTACATCCCATTG+TGG | + | chr8.4:67077807-67077826 | None:intergenic | 30.0% | |
| AAATGATGTGAATGAGATCA+AGG | + | chr8.4:67080318-67080337 | None:intergenic | 30.0% | |
| AACCATAAACATCTTTGTGT+AGG | - | chr8.4:67079346-67079365 | MS.gene056834:intron | 30.0% | |
| AAGGCATGACAAATTTACAA+AGG | - | chr8.4:67080540-67080559 | MS.gene056834:CDS | 30.0% | |
| ACATTTATGTGGTAATTGCA+CGG | - | chr8.4:67078768-67078787 | MS.gene056834:intron | 30.0% | |
| ACCATAAACATCTTTGTGTA+GGG | - | chr8.4:67079347-67079366 | MS.gene056834:intron | 30.0% | |
| ACTCAAAAATGAGGAATCAT+AGG | + | chr8.4:67078744-67078763 | None:intergenic | 30.0% | |
| AGGCATGACAAATTTACAAA+GGG | - | chr8.4:67080541-67080560 | MS.gene056834:CDS | 30.0% | |
| ATGGATAAAGAATAATCCCA+AGG | - | chr8.4:67077950-67077969 | MS.gene056834:CDS | 30.0% | |
| CAAAATCATAAGGACAATAG+AGG | - | chr8.4:67079195-67079214 | MS.gene056834:intron | 30.0% | |
| CAATATATTGATGCCACAAT+GGG | - | chr8.4:67077791-67077810 | MS.gene056834:CDS | 30.0% | |
| CTAACTTTCAAGACTATCAT+GGG | - | chr8.4:67078018-67078037 | MS.gene056834:CDS | 30.0% | |
| CTATTGATGTATCGTAAGAA+AGG | - | chr8.4:67079271-67079290 | MS.gene056834:intron | 30.0% | |
| CTCAAAAATGAGGAATCATA+GGG | + | chr8.4:67078743-67078762 | None:intergenic | 30.0% | |
| CTTGAAAAAATTGCTTAAGG+AGG | - | chr8.4:67080624-67080643 | MS.gene056834:intron | 30.0% | |
| GAAAATGAGCAAGAAAAGTA+AGG | - | chr8.4:67079387-67079406 | MS.gene056834:intron | 30.0% | |
| GAAGACAACATCAATGTAAA+AGG | - | chr8.4:67080106-67080125 | MS.gene056834:intron | 30.0% | |
| GATATGATTATGTGATTGTG+AGG | + | chr8.4:67080919-67080938 | None:intergenic | 30.0% | |
| GCATGCATATACAATGAATA+AGG | + | chr8.4:67078395-67078414 | None:intergenic | 30.0% | |
| GTGAAGCTAAGACTTAAATT+TGG | + | chr8.4:67080865-67080884 | None:intergenic | 30.0% | |
| TATATGCAACCAAATTCAGA+TGG | + | chr8.4:67078490-67078509 | None:intergenic | 30.0% | |
| TCTACTCATCTATTGTTGAT+GGG | - | chr8.4:67079035-67079054 | MS.gene056834:intron | 30.0% | |
| TGCAATTACCACATAAATGT+GGG | + | chr8.4:67078768-67078787 | None:intergenic | 30.0% | |
| TGGTTGCATATATGTCAAAT+GGG | - | chr8.4:67078498-67078517 | MS.gene056834:CDS | 30.0% | |
| TTCTACTCATCTATTGTTGA+TGG | - | chr8.4:67079034-67079053 | MS.gene056834:intron | 30.0% | |
| TTGGCATGTTATTATCAATG+AGG | - | chr8.4:67080672-67080691 | MS.gene056834:intron | 30.0% | |
| TTGGTTGCATATATGTCAAA+TGG | - | chr8.4:67078497-67078516 | MS.gene056834:CDS | 30.0% | |
| ! | ATATATTGTTTCTCAGGCTA+TGG | - | chr8.4:67078178-67078197 | MS.gene056834:CDS | 30.0% |
| ! | ATCATATGATGAGGCTTTTT+AGG | + | chr8.4:67079800-67079819 | None:intergenic | 30.0% |
| ! | CGAATTAATCATGTTTTGCT+TGG | - | chr8.4:67078286-67078305 | MS.gene056834:CDS | 30.0% |
| ! | CTCATTTTCTCGTTTATACA+AGG | + | chr8.4:67079376-67079395 | None:intergenic | 30.0% |
| ! | TATTTTCCATGAGAGAATGT+TGG | - | chr8.4:67079654-67079673 | MS.gene056834:intron | 30.0% |
| ! | TCATATGATGAGGCTTTTTA+GGG | + | chr8.4:67079799-67079818 | None:intergenic | 30.0% |
| ! | TCTTGTTATCTTGAAGTTGT+TGG | + | chr8.4:67080053-67080072 | None:intergenic | 30.0% |
| !! | CTGATGAAAAATTTGTTGAC+AGG | - | chr8.4:67080485-67080504 | MS.gene056834:intron | 30.0% |
| !! | GTTTTTCAAATTACGGTCAA+TGG | + | chr8.4:67079176-67079195 | None:intergenic | 30.0% |
| !! | TAATATTGATGATGAAACGG+TGG | - | chr8.4:67080765-67080784 | MS.gene056834:intron | 30.0% |
| !!! | GTTTATTTTGTGCTCAGTAT+TGG | - | chr8.4:67077869-67077888 | MS.gene056834:CDS | 30.0% |
| AATGATCAAGTGGTGAATTG+TGG | - | chr8.4:67080397-67080416 | MS.gene056834:intron | 35.0% | |
| ACCCTACACAAAGATGTTTA+TGG | + | chr8.4:67079351-67079370 | None:intergenic | 35.0% | |
| ACTATTCCATCAACAAAAGG+TGG | - | chr8.4:67078890-67078909 | MS.gene056834:intron | 35.0% | |
| AGAAAGTTGAAGTCAAACGT+TGG | - | chr8.4:67080836-67080855 | MS.gene056834:CDS | 35.0% | |
| ATTCATCCAACATTCTCTCA+TGG | + | chr8.4:67079663-67079682 | None:intergenic | 35.0% | |
| CACCCTAAAAAAAATCCTCA+GGG | - | chr8.4:67077705-67077724 | MS.gene056834:CDS | 35.0% | |
| CCAATATATTGATGCCACAA+TGG | - | chr8.4:67077790-67077809 | MS.gene056834:CDS | 35.0% | |
| CCATTGTGGCATCAATATAT+TGG | + | chr8.4:67077793-67077812 | None:intergenic | 35.0% | |
| CTTTAGTGTCTCTTTGTCTA+AGG | + | chr8.4:67080170-67080189 | None:intergenic | 35.0% | |
| GCAATTACCACATAAATGTG+GGG | + | chr8.4:67078767-67078786 | None:intergenic | 35.0% | |
| GCCATAAAACATTGATCCAA+CGG | + | chr8.4:67079526-67079545 | None:intergenic | 35.0% | |
| GCTAACTTTCAAGACTATCA+TGG | - | chr8.4:67078017-67078036 | MS.gene056834:CDS | 35.0% | |
| GCTTTGATCTGATTGAAGAA+TGG | - | chr8.4:67077931-67077950 | MS.gene056834:CDS | 35.0% | |
| GTGCAATTACCACATAAATG+TGG | + | chr8.4:67078769-67078788 | None:intergenic | 35.0% | |
| GTGGACAGAATTAACTTCAT+AGG | + | chr8.4:67078697-67078716 | None:intergenic | 35.0% | |
| GTTCGAGAAGGTTGTTAAAA+AGG | - | chr8.4:67080521-67080540 | MS.gene056834:CDS | 35.0% | |
| TAAGTCTTAGCTTCACTTCA+AGG | - | chr8.4:67080869-67080888 | MS.gene056834:CDS | 35.0% | |
| TCACTAACACTTACATAGCT+TGG | + | chr8.4:67080271-67080290 | None:intergenic | 35.0% | |
| TTGAAGAAGAGTTGAAGCTT+TGG | - | chr8.4:67080653-67080672 | MS.gene056834:intron | 35.0% | |
| TTTATGTCAAAAGTGAGAGG+TGG | - | chr8.4:67078206-67078225 | MS.gene056834:CDS | 35.0% | |
| ! | AGTCATGAGGTAGTCTATTT+TGG | + | chr8.4:67079128-67079147 | None:intergenic | 35.0% |
| ! | ATGGAGAATTTTCACCATGT+TGG | + | chr8.4:67077647-67077666 | None:intergenic | 35.0% |
| ! | ATTTTCACCATGTTGGTCAT+TGG | + | chr8.4:67077640-67077659 | None:intergenic | 35.0% |
| ! | GCTTGGCTGACATTAATTTT+TGG | + | chr8.4:67079746-67079765 | None:intergenic | 35.0% |
| ! | GTCATGAGGTAGTCTATTTT+GGG | + | chr8.4:67079127-67079146 | None:intergenic | 35.0% |
| ! | TAGTCGATTTCCAAGTAATG+CGG | - | chr8.4:67080582-67080601 | MS.gene056834:CDS | 35.0% |
| ! | TGTCTAAGGTTGTACCTAAT+GGG | + | chr8.4:67080156-67080175 | None:intergenic | 35.0% |
| ! | TTGTCTAAGGTTGTACCTAA+TGG | + | chr8.4:67080157-67080176 | None:intergenic | 35.0% |
| !! | GTCTTCTTTTAATTGCTCTG+AGG | - | chr8.4:67080717-67080736 | MS.gene056834:intron | 35.0% |
| !! | TTCTTTTAGAGAGTTCGAGA+AGG | - | chr8.4:67080509-67080528 | MS.gene056834:CDS | 35.0% |
| !!! | ACACCCTGAGGATTTTTTTT+AGG | + | chr8.4:67077711-67077730 | None:intergenic | 35.0% |
| !!! | ATTCTCCATATTTTGATGGG+TGG | - | chr8.4:67077658-67077677 | MS.gene056834:CDS | 35.0% |
| !!! | CACCCTGAGGATTTTTTTTA+GGG | + | chr8.4:67077710-67077729 | None:intergenic | 35.0% |
| !!! | GGATTTTTTTTAGGGTGGAA+TGG | + | chr8.4:67077702-67077721 | None:intergenic | 35.0% |
| !!! | TCTTTTAATTGCTCTGAGGT+TGG | - | chr8.4:67080721-67080740 | MS.gene056834:intron | 35.0% |
| AACCGTATATTGATGAGTGG+AGG | - | chr8.4:67078248-67078267 | MS.gene056834:CDS | 40.0% | |
| AAGAAAAGTAAGGAACGCGA+CGG | - | chr8.4:67079397-67079416 | MS.gene056834:intron | 40.0% | |
| AATGTGGGGACTCAAAAATG+AGG | + | chr8.4:67078753-67078772 | None:intergenic | 40.0% | |
| ACACGACTCAGACATAAGTT+AGG | - | chr8.4:67078826-67078845 | MS.gene056834:intron | 40.0% | |
| ACCGTATATTGATGAGTGGA+GGG | - | chr8.4:67078249-67078268 | MS.gene056834:CDS | 40.0% | |
| AGTTGTTGGAGCTATCACAA+TGG | + | chr8.4:67080039-67080058 | None:intergenic | 40.0% | |
| ATCAAGTGGTGAATTGTGGA+AGG | - | chr8.4:67080401-67080420 | MS.gene056834:intron | 40.0% | |
| ATGCATACCCTGGATAGTAA+GGG | + | chr8.4:67078343-67078362 | None:intergenic | 40.0% | |
| ATTGCAACCAATGACCAACA+TGG | - | chr8.4:67077630-67077649 | MS.gene056834:CDS | 40.0% | |
| ATTTACAAAGGGACTCGAAG+AGG | - | chr8.4:67080552-67080571 | MS.gene056834:CDS | 40.0% | |
| CAAAAAAGTCCCGCATTACT+TGG | + | chr8.4:67080595-67080614 | None:intergenic | 40.0% | |
| CACAAATGAAAGGACCTGAA+AGG | + | chr8.4:67079604-67079623 | None:intergenic | 40.0% | |
| CCACCCTAAAAAAAATCCTC+AGG | - | chr8.4:67077704-67077723 | MS.gene056834:CDS | 40.0% | |
| CCACTCATCAATATACGGTT+AGG | + | chr8.4:67078248-67078267 | None:intergenic | 40.0% | |
| CCTAACCGTATATTGATGAG+TGG | - | chr8.4:67078245-67078264 | MS.gene056834:CDS | 40.0% | |
| GAGCAATTAAAAGAAGACCC+CGG | + | chr8.4:67080715-67080734 | None:intergenic | 40.0% | |
| GCTTTCCACCCATCAAAATA+TGG | + | chr8.4:67077666-67077685 | None:intergenic | 40.0% | |
| GGAAGGAAAATGTCAAGCTT+TGG | - | chr8.4:67080418-67080437 | MS.gene056834:intron | 40.0% | |
| GTGATAAAATCTATGTGCCG+TGG | - | chr8.4:67078462-67078481 | MS.gene056834:CDS | 40.0% | |
| GTGCTTACACTTGTAAACTC+TGG | + | chr8.4:67078047-67078066 | None:intergenic | 40.0% | |
| GTTTCGGAAAGTGATTGAGT+TGG | - | chr8.4:67079768-67079787 | MS.gene056834:intron | 40.0% | |
| TAGTTCTCCAACACAAGTCA+CGG | + | chr8.4:67079997-67080016 | None:intergenic | 40.0% | |
| TGATGAAATCTATGCAGCCA+CGG | - | chr8.4:67080234-67080253 | MS.gene056834:CDS | 40.0% | |
| TTTGAGTCCCCACATTTATG+TGG | - | chr8.4:67078757-67078776 | MS.gene056834:intron | 40.0% | |
| ! | AGAAGGAGTGTGTAAGTTCA+GGG | - | chr8.4:67077989-67078008 | MS.gene056834:CDS | 40.0% |
| ! | AGTCGATTTCCAAGTAATGC+GGG | - | chr8.4:67080583-67080602 | MS.gene056834:CDS | 40.0% |
| ! | GAAACTCCACCTTTTGTTGA+TGG | + | chr8.4:67078899-67078918 | None:intergenic | 40.0% |
| ! | GCCGTTGGATCAATGTTTTA+TGG | - | chr8.4:67079522-67079541 | MS.gene056834:intron | 40.0% |
| ! | TAAGGTTGTACCTAATGGGT+TGG | + | chr8.4:67080152-67080171 | None:intergenic | 40.0% |
| ! | TGACTTGTGTTGGAGAACTA+AGG | - | chr8.4:67079997-67080016 | MS.gene056834:intron | 40.0% |
| ! | TTGGTCATTGGTTGCAATCT+TGG | + | chr8.4:67077628-67077647 | None:intergenic | 40.0% |
| !! | TTAATTGCTCTGAGGTTGGT+TGG | - | chr8.4:67080725-67080744 | MS.gene056834:intron | 40.0% |
| !!! | CCTGAGGATTTTTTTTAGGG+TGG | + | chr8.4:67077707-67077726 | None:intergenic | 40.0% |
| !!! | GTAATGCGGGACTTTTTTGT+TGG | - | chr8.4:67080596-67080615 | MS.gene056834:CDS | 40.0% |
| AACACTTACATAGCTTGGCG+AGG | + | chr8.4:67080266-67080285 | None:intergenic | 45.0% | |
| ACTATCCCAACCCTAAAACC+AGG | + | chr8.4:67080367-67080386 | None:intergenic | 45.0% | |
| AGATTTCCTGCTGTAACAGC+AGG | - | chr8.4:67079432-67079451 | MS.gene056834:intron | 45.0% | |
| CATGCATACCCTGGATAGTA+AGG | + | chr8.4:67078344-67078363 | None:intergenic | 45.0% | |
| CCCCTCCACTCATCAATATA+CGG | + | chr8.4:67078253-67078272 | None:intergenic | 45.0% | |
| CCGTATATTGATGAGTGGAG+GGG | - | chr8.4:67078250-67078269 | MS.gene056834:CDS | 45.0% | |
| CCTCAGGGTGTAATTCAGAT+GGG | - | chr8.4:67077720-67077739 | MS.gene056834:CDS | 45.0% | |
| CGGTGGAAATTGCATTGCAA+AGG | - | chr8.4:67080782-67080801 | MS.gene056834:intron | 45.0% | |
| CTACCTCATGACTCATAGCT+TGG | - | chr8.4:67079135-67079154 | MS.gene056834:intron | 45.0% | |
| CTATCCCAACCCTAAAACCA+GGG | + | chr8.4:67080366-67080385 | None:intergenic | 45.0% | |
| CTGAACTTACACACTCCTTC+TGG | + | chr8.4:67077990-67078009 | None:intergenic | 45.0% | |
| GATGGGTCTTGCTGAAAATC+AGG | - | chr8.4:67077737-67077756 | MS.gene056834:CDS | 45.0% | |
| GCTTCAATTTGCACTCCAGA+AGG | - | chr8.4:67077972-67077991 | MS.gene056834:CDS | 45.0% | |
| GGAGTGCAAATTGAAGCCTT+GGG | + | chr8.4:67077969-67077988 | None:intergenic | 45.0% | |
| GGTGAAGCTTAATGTGTCAC+CGG | - | chr8.4:67080693-67080712 | MS.gene056834:intron | 45.0% | |
| GTAGAACAAATCTGAGCCGT+TGG | - | chr8.4:67079507-67079526 | MS.gene056834:intron | 45.0% | |
| GTCAAAAGTGAGAGGTGGTA+GGG | - | chr8.4:67078211-67078230 | MS.gene056834:CDS | 45.0% | |
| GTCTTAGCTTCACTTCAAGG+AGG | - | chr8.4:67080872-67080891 | MS.gene056834:CDS | 45.0% | |
| GTGAAGCTTAATGTGTCACC+GGG | - | chr8.4:67080694-67080713 | MS.gene056834:intron | 45.0% | |
| TCAAAAGACTTAGGGTTCCC+TGG | - | chr8.4:67080346-67080365 | MS.gene056834:CDS | 45.0% | |
| TCCTCAGGGTGTAATTCAGA+TGG | - | chr8.4:67077719-67077738 | MS.gene056834:CDS | 45.0% | |
| TGAAGCTTAATGTGTCACCG+GGG | - | chr8.4:67080695-67080714 | MS.gene056834:intron | 45.0% | |
| TGCATACCCTGGATAGTAAG+GGG | + | chr8.4:67078342-67078361 | None:intergenic | 45.0% | |
| TGGAGTGCAAATTGAAGCCT+TGG | + | chr8.4:67077970-67077989 | None:intergenic | 45.0% | |
| TGTAACAGCAGGATGCTGTA+AGG | - | chr8.4:67079443-67079462 | MS.gene056834:intron | 45.0% | |
| TGTAAGGCGTGTGAGATAAG+TGG | - | chr8.4:67079459-67079478 | MS.gene056834:intron | 45.0% | |
| TGTCAAAAGTGAGAGGTGGT+AGG | - | chr8.4:67078210-67078229 | MS.gene056834:CDS | 45.0% | |
| TTCCTACCCCTTACTATCCA+GGG | - | chr8.4:67078333-67078352 | MS.gene056834:CDS | 45.0% | |
| TTGGAGCTATCACAATGGAC+AGG | + | chr8.4:67080034-67080053 | None:intergenic | 45.0% | |
| ! | ACCAAATTCAGATGGTGCCA+CGG | + | chr8.4:67078482-67078501 | None:intergenic | 45.0% |
| ! | ATGTTTTGCTTGGCTGATCC+AGG | - | chr8.4:67078296-67078315 | MS.gene056834:CDS | 45.0% |
| ! | CAGAAGGAGTGTGTAAGTTC+AGG | - | chr8.4:67077988-67078007 | MS.gene056834:CDS | 45.0% |
| ! | GAAAAGGTACATGCATACCC+TGG | + | chr8.4:67078353-67078372 | None:intergenic | 45.0% |
| !! | ACTTAGGGTTCCCTGGTTTT+AGG | - | chr8.4:67080353-67080372 | MS.gene056834:intron | 45.0% |
| !! | CTCTGAGGTTGGTTGGTTTA+GGG | - | chr8.4:67080732-67080751 | MS.gene056834:intron | 45.0% |
| !! | GGAACTAGAAAAGCATCTCC+TGG | + | chr8.4:67078317-67078336 | None:intergenic | 45.0% |
| !! | GTTGTACCTAATGGGTTGGA+GGG | + | chr8.4:67080148-67080167 | None:intergenic | 45.0% |
| !! | TCGGAAAGTGATTGAGTTGG+TGG | - | chr8.4:67079771-67079790 | MS.gene056834:intron | 45.0% |
| !! | TTGTACCTAATGGGTTGGAG+GGG | + | chr8.4:67080147-67080166 | None:intergenic | 45.0% |
| !!! | CTTAGGGTTCCCTGGTTTTA+GGG | - | chr8.4:67080354-67080373 | MS.gene056834:intron | 45.0% |
| AATGTCAGCCAAGCGCGTTT+CGG | - | chr8.4:67079752-67079771 | MS.gene056834:intron | 50.0% | |
| ACAAACCCCTCCAACCCATT+AGG | - | chr8.4:67080139-67080158 | MS.gene056834:intron | 50.0% | |
| ACCTCACTTAGATGGAGAGG+TGG | + | chr8.4:67078716-67078735 | None:intergenic | 50.0% | |
| AGGGTGACACCTCACTTAGA+TGG | + | chr8.4:67078724-67078743 | None:intergenic | 50.0% | |
| ATCACTTTCCGAAACGCGCT+TGG | + | chr8.4:67079763-67079782 | None:intergenic | 50.0% | |
| CCACCAAGCTATGAGTCATG+AGG | + | chr8.4:67079141-67079160 | None:intergenic | 50.0% | |
| CCCATCTGAATTACACCCTG+AGG | + | chr8.4:67077723-67077742 | None:intergenic | 50.0% | |
| CCTCATGACTCATAGCTTGG+TGG | - | chr8.4:67079138-67079157 | MS.gene056834:intron | 50.0% | |
| GACACCTCACTTAGATGGAG+AGG | + | chr8.4:67078719-67078738 | None:intergenic | 50.0% | |
| GCTCGAACAAGTGGTGAATG+AGG | + | chr8.4:67080943-67080962 | None:intergenic | 50.0% | |
| GTTCCTACCCCTTACTATCC+AGG | - | chr8.4:67078332-67078351 | MS.gene056834:CDS | 50.0% | |
| TACCCTGGATAGTAAGGGGT+AGG | + | chr8.4:67078338-67078357 | None:intergenic | 50.0% | |
| TCCACCTCTCCATCTAAGTG+AGG | - | chr8.4:67078712-67078731 | MS.gene056834:intron | 50.0% | |
| TGAAAGGACCTGAAAGGACC+TGG | + | chr8.4:67079598-67079617 | None:intergenic | 50.0% | |
| ! | CAACACGCTGTTTCACGTTG+TGG | + | chr8.4:67079558-67079577 | None:intergenic | 50.0% |
| ! | GATTCGTCCGTGACTTGTGT+TGG | - | chr8.4:67079987-67080006 | MS.gene056834:intron | 50.0% |
| ! | TAAGGAACGCGACGGATTTC+AGG | - | chr8.4:67079405-67079424 | MS.gene056834:intron | 50.0% |
| !! | GCTCTGAGGTTGGTTGGTTT+AGG | - | chr8.4:67080731-67080750 | MS.gene056834:intron | 50.0% |
| !! | GGTTGTACCTAATGGGTTGG+AGG | + | chr8.4:67080149-67080168 | None:intergenic | 50.0% |
| !!! | GGTTCCCTGGTTTTAGGGTT+GGG | - | chr8.4:67080359-67080378 | MS.gene056834:intron | 50.0% |
| AGCGTGTTGCAGCTACAGCA+GGG | - | chr8.4:67079569-67079588 | MS.gene056834:intron | 55.0% | |
| CAGCATCCTGCTGTTACAGC+AGG | + | chr8.4:67079441-67079460 | None:intergenic | 55.0% | |
| CAGGGAATCCAGGTCCTTTC+AGG | - | chr8.4:67079587-67079606 | MS.gene056834:intron | 55.0% | |
| GCCGTGGCACCATCTGAATT+TGG | - | chr8.4:67078478-67078497 | MS.gene056834:CDS | 55.0% | |
| TGATGAGTGGAGGGGCAACA+GGG | - | chr8.4:67078258-67078277 | MS.gene056834:CDS | 55.0% | |
| TTGATGAGTGGAGGGGCAAC+AGG | - | chr8.4:67078257-67078276 | MS.gene056834:CDS | 55.0% | |
| !!! | GGGTTCCCTGGTTTTAGGGT+TGG | - | chr8.4:67080358-67080377 | MS.gene056834:intron | 55.0% |
| CAGCGTGTTGCAGCTACAGC+AGG | - | chr8.4:67079568-67079587 | MS.gene056834:intron | 60.0% | |
| GATGAGTGGAGGGGCAACAG+GGG | - | chr8.4:67078259-67078278 | MS.gene056834:CDS | 60.0% | |
| GCAGCTACAGCAGGGAATCC+AGG | - | chr8.4:67079577-67079596 | MS.gene056834:intron | 60.0% | |
| GCTTGGCGAGGTGAAAACCG+TGG | + | chr8.4:67080254-67080273 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 67077591 | 67080969 | 67077591 | ID=MS.gene056834 |
| chr8.4 | mRNA | 67077591 | 67080969 | 67077591 | ID=MS.gene056834.t1;Parent=MS.gene056834 |
| chr8.4 | exon | 67080802 | 67080969 | 67080802 | ID=MS.gene056834.t1.exon1;Parent=MS.gene056834.t1 |
| chr8.4 | CDS | 67080802 | 67080969 | 67080802 | ID=cds.MS.gene056834.t1;Parent=MS.gene056834.t1 |
| chr8.4 | exon | 67080502 | 67080633 | 67080502 | ID=MS.gene056834.t1.exon2;Parent=MS.gene056834.t1 |
| chr8.4 | CDS | 67080502 | 67080633 | 67080502 | ID=cds.MS.gene056834.t1;Parent=MS.gene056834.t1 |
| chr8.4 | exon | 67080206 | 67080366 | 67080206 | ID=MS.gene056834.t1.exon3;Parent=MS.gene056834.t1 |
| chr8.4 | CDS | 67080206 | 67080366 | 67080206 | ID=cds.MS.gene056834.t1;Parent=MS.gene056834.t1 |
| chr8.4 | exon | 67077591 | 67078572 | 67077591 | ID=MS.gene056834.t1.exon4;Parent=MS.gene056834.t1 |
| chr8.4 | CDS | 67077591 | 67078572 | 67077591 | ID=cds.MS.gene056834.t1;Parent=MS.gene056834.t1 |
| Gene Sequence |
| Protein sequence |
