AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064433

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064433.t1 MTR_5g024340 65.278 360 118 3 26 384 23 376 4.93e-173 488
MS.gene064433.t1 MTR_1g086350 52.273 352 137 5 59 385 24 369 8.35e-122 357
MS.gene064433.t1 MTR_1g086350 55.346 318 116 4 88 385 74 385 4.59e-121 356
MS.gene064433.t1 MTR_3g107880 53.216 342 149 4 47 385 44 377 9.59e-121 355
MS.gene064433.t1 MTR_3g107880 53.509 342 147 5 47 385 44 376 8.01e-120 352
MS.gene064433.t1 MTR_3g107880 54.430 316 141 2 73 385 4 319 8.17e-120 350
MS.gene064433.t1 MTR_4g116420 52.500 320 143 4 72 385 67 383 6.15e-114 337
MS.gene064433.t1 MTR_2g033000 52.733 311 134 3 88 385 56 366 4.84e-110 327
MS.gene064433.t1 MTR_4g123080 53.055 311 133 2 88 385 51 361 5.45e-110 327
MS.gene064433.t1 MTR_4g123080 53.055 311 133 2 88 385 69 379 8.39e-110 327
MS.gene064433.t1 MTR_1g086350 53.650 274 101 4 132 385 16 283 5.23e-97 291
MS.gene064433.t1 MTR_4g123080 54.140 157 69 1 232 385 110 266 9.49e-51 171
MS.gene064433.t1 MTR_1g115570 40.435 230 121 7 131 357 125 341 7.20e-44 155
MS.gene064433.t1 MTR_1g014640 37.828 267 142 8 92 353 76 323 4.88e-43 153
MS.gene064433.t1 MTR_1g013400 37.828 267 142 8 92 353 76 323 4.88e-43 153
MS.gene064433.t1 MTR_3g105730 39.648 227 123 5 131 353 64 280 1.04e-42 151
MS.gene064433.t1 MTR_3g105730 39.648 227 123 5 131 353 42 258 1.27e-42 150
MS.gene064433.t1 MTR_1g050520 34.982 283 151 8 88 355 382 646 1.32e-40 152
MS.gene064433.t1 MTR_2g008850 37.402 254 133 7 106 353 1 234 2.12e-40 143
MS.gene064433.t1 MTR_2g008850 36.431 269 144 8 92 353 32 280 7.85e-40 143
MS.gene064433.t1 MTR_5g071550 35.094 265 139 7 99 351 129 372 9.40e-40 145
MS.gene064433.t1 MTR_4g094208 33.688 282 157 7 80 353 17 276 3.61e-39 141
MS.gene064433.t1 MTR_5g063940 35.433 254 138 7 106 353 1 234 9.17e-39 139
MS.gene064433.t1 MTR_3g074610 36.681 229 127 5 131 353 65 281 1.71e-38 139
MS.gene064433.t1 MTR_5g063940 35.433 254 138 7 106 353 48 281 5.98e-38 138
MS.gene064433.t1 MTR_6g081850 33.333 330 175 12 54 356 10 321 1.28e-36 135
MS.gene064433.t1 MTR_1g014190 28.302 318 162 8 92 353 22 329 1.46e-36 136
MS.gene064433.t1 MTR_1g014190 28.302 318 162 8 92 353 60 367 3.21e-36 136
MS.gene064433.t1 MTR_3g091060 36.364 231 131 6 132 357 125 344 4.99e-36 135
MS.gene064433.t1 MTR_3g464700 36.161 224 120 6 99 316 93 299 3.74e-35 132
MS.gene064433.t1 MTR_3g105880 28.616 318 161 8 92 353 22 329 7.67e-35 132
MS.gene064433.t1 MTR_3g464650 32.950 261 150 7 99 351 69 312 7.97e-35 130
MS.gene064433.t1 MTR_4g125810 28.977 352 186 10 38 351 176 501 4.41e-33 129
MS.gene064433.t1 MTR_4g007440 27.987 318 164 7 91 353 21 328 6.16e-33 127
MS.gene064433.t1 MTR_5g071550 35.683 227 115 6 99 315 129 334 1.14e-32 126
MS.gene064433.t1 MTR_3g105880 28.571 280 139 6 92 320 22 291 1.69e-32 124
MS.gene064433.t1 MTR_8g463130 34.934 229 131 7 131 353 65 281 2.83e-32 123
MS.gene064433.t1 MTR_8g463130 34.498 229 132 6 131 353 37 253 3.35e-32 122
MS.gene064433.t1 MTR_2g078760 35.776 232 121 8 131 351 37 251 6.91e-32 121
MS.gene064433.t1 MTR_2g078760 35.776 232 121 8 131 351 116 330 2.28e-31 122
MS.gene064433.t1 MTR_1g015110 33.588 262 130 9 132 355 290 545 3.04e-31 125
MS.gene064433.t1 MTR_2g040500 30.351 313 149 10 101 351 228 533 7.90e-30 120
MS.gene064433.t1 MTR_3g104710 34.884 258 124 9 132 351 286 537 1.37e-29 120
MS.gene064433.t1 MTR_3g491830 28.402 338 180 10 54 350 30 346 2.11e-29 117
MS.gene064433.t1 MTR_4g094542 31.878 229 137 6 131 353 149 364 1.27e-28 115
MS.gene064433.t1 MTR_1g028300 33.213 277 152 9 95 351 114 377 3.36e-27 111
MS.gene064433.t1 MTR_3g068200 32.308 260 133 9 129 351 120 373 2.32e-26 109
MS.gene064433.t1 MTR_3g115900 87.324 71 7 1 1 71 9 77 5.34e-26 100
MS.gene064433.t1 MTR_8g102550 29.206 315 178 9 75 366 108 400 9.90e-26 107
MS.gene064433.t1 MTR_5g009370 33.473 239 130 8 101 323 60 285 7.80e-25 103
MS.gene064433.t1 MTR_2g078760 33.516 182 107 5 131 306 116 289 1.33e-22 97.1
MS.gene064433.t1 MTR_1g067210 30.000 290 136 8 122 351 66 348 2.53e-22 97.8
MS.gene064433.t1 MTR_7g100240 28.622 283 133 9 130 351 69 343 2.95e-21 94.4
MS.gene064433.t1 MTR_3g032700 30.000 230 112 9 132 318 68 291 3.45e-21 95.1
MS.gene064433.t1 MTR_5g080680 32.353 204 114 5 132 317 132 329 6.81e-21 93.6
MS.gene064433.t1 MTR_1g116260 28.028 289 141 9 130 358 78 359 9.28e-21 93.2
MS.gene064433.t1 MTR_3g032660 29.310 232 115 9 130 318 66 291 1.21e-20 93.2
MS.gene064433.t1 MTR_4g118340 29.008 262 135 10 132 351 86 338 1.45e-20 92.8
MS.gene064433.t1 MTR_3g105730 40.336 119 70 1 131 248 64 182 2.08e-20 89.4
MS.gene064433.t1 MTR_2g033910 26.471 306 157 10 130 373 73 372 1.37e-19 89.7
MS.gene064433.t1 MTR_7g090530 27.922 308 127 14 132 364 69 356 1.70e-19 90.1
MS.gene064433.t1 MTR_5g071550 36.184 152 76 4 99 244 129 265 1.88e-19 88.2
MS.gene064433.t1 MTR_7g090550 28.736 261 131 12 132 345 70 322 5.44e-19 88.6
MS.gene064433.t1 MTR_8g074930 26.299 308 147 12 130 369 77 372 1.72e-18 86.7
MS.gene064433.t1 MTR_0015s0140 28.049 246 134 8 130 338 77 316 2.58e-18 86.3
MS.gene064433.t1 MTR_2g020970 29.537 281 154 11 132 375 87 360 2.63e-18 85.9
MS.gene064433.t1 MTR_4g120410 28.467 274 146 9 132 360 91 359 4.78e-18 85.1
MS.gene064433.t1 MTR_7g080170 34.545 165 84 4 168 313 74 233 5.48e-18 85.1
MS.gene064433.t1 MTR_1g016620 30.702 228 112 8 130 316 66 288 6.93e-18 84.3
MS.gene064433.t1 MTR_2g020970 29.961 257 139 9 132 351 87 339 1.28e-17 84.3
MS.gene064433.t1 MTR_7g080170 34.545 165 84 4 168 313 182 341 1.57e-17 84.3
MS.gene064433.t1 MTR_6g087000 26.038 265 142 8 132 351 124 379 3.13e-17 84.3
MS.gene064433.t1 MTR_6g087000 26.038 265 142 8 132 351 124 379 3.18e-17 84.0
MS.gene064433.t1 MTR_1g112840 26.846 298 158 11 130 369 79 374 5.01e-17 82.4
MS.gene064433.t1 MTR_7g081020 26.897 290 147 9 130 360 74 357 5.87e-17 82.0
MS.gene064433.t1 MTR_2g435550 28.674 279 137 11 134 361 94 361 7.60e-17 81.6
MS.gene064433.t1 MTR_2g435550 28.674 279 137 11 134 361 80 347 9.65e-17 81.3
MS.gene064433.t1 MTR_1g106855 28.369 282 140 12 129 351 57 335 2.19e-16 80.5
MS.gene064433.t1 MTR_1g106855 30.472 233 116 9 129 318 57 286 6.46e-16 78.2
MS.gene064433.t1 MTR_2g435550 31.111 225 108 9 134 316 94 313 1.70e-15 77.8
MS.gene064433.t1 MTR_7g021530 32.749 171 87 6 169 316 113 278 3.74e-15 76.6
MS.gene064433.t1 MTR_7g081020 27.848 237 124 9 130 327 74 302 1.19e-14 74.7
MS.gene064433.t1 MTR_7g021530 32.558 172 84 6 169 315 163 327 1.42e-14 75.1
MS.gene064433.t1 MTR_7g060770 25.000 248 142 6 131 336 262 507 2.24e-14 75.1
MS.gene064433.t1 MTR_7g021530 32.558 172 84 6 169 315 204 368 2.31e-14 74.7
MS.gene064433.t1 MTR_3g032590 32.278 158 73 7 192 318 143 297 3.96e-14 73.9
MS.gene064433.t1 MTR_1g110210 27.757 263 141 13 131 366 67 307 6.88e-14 72.4
MS.gene064433.t1 MTR_2g090190 27.517 298 136 13 82 315 41 322 7.65e-14 73.2
MS.gene064433.t1 MTR_4g113480 23.904 251 148 8 132 347 74 316 7.87e-14 73.2
MS.gene064433.t1 MTR_8g074930 28.205 234 104 9 192 369 35 260 1.30e-13 70.9
MS.gene064433.t1 MTR_4g013295 26.950 282 138 13 132 357 78 347 2.00e-13 71.2
MS.gene064433.t1 MTR_4g037470 27.857 280 127 13 95 315 66 329 2.28e-13 71.6
MS.gene064433.t1 MTR_4g037470 28.750 240 111 10 132 316 105 339 3.65e-13 71.2
MS.gene064433.t1 MTR_5g005810 27.309 249 155 9 127 353 327 571 4.66e-13 70.9
MS.gene064433.t1 MTR_0015s0140 29.545 176 89 6 192 338 93 262 5.21e-13 69.7
MS.gene064433.t1 MTR_1g083690 31.383 188 95 6 191 353 172 350 6.45e-13 69.7
MS.gene064433.t1 MTR_4g094208 29.651 172 106 4 80 248 17 176 9.42e-13 67.4
MS.gene064433.t1 MTR_5g080680 32.237 152 85 4 132 265 132 283 1.55e-12 67.8
MS.gene064433.t1 MTR_2g078760 33.065 124 70 4 131 248 116 232 1.05e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064433.t1 AT2G33700 70.466 386 102 6 3 385 1 377 0.0 552
MS.gene064433.t1 AT3G51470 65.730 356 107 3 29 384 18 358 9.00e-170 478
MS.gene064433.t1 AT3G51470 70.740 311 86 1 74 384 9 314 1.06e-164 464
MS.gene064433.t1 AT2G25620 52.738 347 150 5 46 385 49 388 1.81e-118 349
MS.gene064433.t1 AT2G25620 52.738 347 150 5 46 385 49 388 1.81e-118 349
MS.gene064433.t1 AT3G62260 48.045 358 164 4 50 385 26 383 5.33e-110 327
MS.gene064433.t1 AT3G62260 48.179 357 164 4 50 385 26 382 1.43e-109 326
MS.gene064433.t1 AT1G48040 46.921 341 154 4 70 384 41 380 7.87e-102 306
MS.gene064433.t1 AT3G62260 52.218 293 127 3 106 385 1 293 3.42e-101 302
MS.gene064433.t1 AT3G17250 49.375 320 140 8 83 385 107 421 5.57e-98 298
MS.gene064433.t1 AT5G10740 39.326 267 138 8 92 353 32 279 1.07e-46 163
MS.gene064433.t1 AT5G10740 39.326 267 138 8 92 353 32 279 1.07e-46 163
MS.gene064433.t1 AT4G31750 36.755 302 161 9 72 368 18 294 6.03e-45 157
MS.gene064433.t1 AT4G31750 36.755 302 161 9 72 368 18 294 6.03e-45 157
MS.gene064433.t1 AT4G31750 36.755 302 161 9 72 368 18 294 6.81e-45 157
MS.gene064433.t1 AT1G43900 37.407 270 138 10 92 353 122 368 3.83e-43 154
MS.gene064433.t1 AT5G24940 40.708 226 120 6 132 353 64 279 6.02e-43 155
MS.gene064433.t1 AT5G53140 34.211 266 153 6 95 356 103 350 1.03e-41 152
MS.gene064433.t1 AT5G53140 34.211 266 153 6 95 356 103 350 1.03e-41 152
MS.gene064433.t1 AT1G78200 36.471 255 137 7 106 353 1 237 1.90e-41 146
MS.gene064433.t1 AT1G78200 36.471 255 137 7 106 353 1 237 1.90e-41 146
MS.gene064433.t1 AT1G78200 36.471 255 137 7 106 353 46 282 2.19e-40 144
MS.gene064433.t1 AT1G78200 36.471 255 137 7 106 353 46 282 2.19e-40 144
MS.gene064433.t1 AT1G78200 36.471 255 137 7 106 353 46 282 2.19e-40 144
MS.gene064433.t1 AT2G40860 33.882 304 167 8 67 355 268 552 3.04e-40 150
MS.gene064433.t1 AT2G40860 33.882 304 167 8 67 355 366 650 4.42e-40 150
MS.gene064433.t1 AT1G67820 37.247 247 127 8 95 332 86 313 7.03e-39 144
MS.gene064433.t1 AT1G67820 37.247 247 127 8 95 332 122 349 9.62e-39 144
MS.gene064433.t1 AT1G22280 35.156 256 136 7 106 353 47 280 4.91e-38 138
MS.gene064433.t1 AT4G31860 28.182 330 171 6 92 365 22 341 6.01e-38 140
MS.gene064433.t1 AT1G34750 34.510 255 135 7 106 351 48 279 6.81e-38 138
MS.gene064433.t1 AT1G34750 34.510 255 135 7 106 351 48 279 6.81e-38 138
MS.gene064433.t1 AT1G34750 34.510 255 135 7 106 351 48 279 6.81e-38 138
MS.gene064433.t1 AT2G20630 34.498 229 132 5 131 353 62 278 6.36e-37 135
MS.gene064433.t1 AT2G20630 34.498 229 132 5 131 353 62 278 1.49e-36 134
MS.gene064433.t1 AT2G25070 28.440 327 168 6 92 362 22 338 3.84e-36 135
MS.gene064433.t1 AT2G25070 28.440 327 168 6 92 362 22 338 3.84e-36 135
MS.gene064433.t1 AT2G30020 35.496 262 144 8 99 351 145 390 6.14e-36 135
MS.gene064433.t1 AT1G18030 32.372 312 163 10 76 353 51 348 7.28e-36 134
MS.gene064433.t1 AT1G22280 35.496 262 133 9 106 353 47 286 7.81e-36 132
MS.gene064433.t1 AT4G28400 34.498 229 132 6 131 353 44 260 8.90e-35 129
MS.gene064433.t1 AT2G40860 32.526 289 161 8 67 340 366 635 1.52e-34 135
MS.gene064433.t1 AT4G28400 34.498 229 132 6 131 353 66 282 2.03e-34 129
MS.gene064433.t1 AT1G07160 33.712 264 147 8 99 351 128 374 1.36e-33 129
MS.gene064433.t1 AT4G31860 28.571 280 139 5 92 320 22 291 1.63e-32 124
MS.gene064433.t1 AT2G40180 33.208 265 150 7 99 351 134 383 4.19e-32 125
MS.gene064433.t1 AT5G57050 29.752 363 177 14 56 351 58 409 1.25e-30 121
MS.gene064433.t1 AT3G15260 34.211 228 132 6 132 353 73 288 5.37e-30 117
MS.gene064433.t1 AT3G15260 34.211 228 132 6 132 353 73 288 5.37e-30 117
MS.gene064433.t1 AT5G57050 30.556 324 164 13 78 351 57 369 1.31e-29 118
MS.gene064433.t1 AT4G26080 30.145 345 171 15 68 355 93 424 1.89e-29 118
MS.gene064433.t1 AT4G31860 28.409 264 128 5 92 304 22 275 3.59e-29 114
MS.gene064433.t1 AT1G18030 31.439 264 134 9 76 306 51 300 4.93e-28 112
MS.gene064433.t1 AT2G29380 31.930 285 149 11 101 351 85 358 1.13e-27 112
MS.gene064433.t1 AT1G07430 33.171 205 112 5 132 317 157 355 2.02e-26 110
MS.gene064433.t1 AT1G72770 30.060 336 159 12 79 351 177 499 2.88e-26 110
MS.gene064433.t1 AT1G72770 30.060 336 159 12 79 351 177 499 2.88e-26 110
MS.gene064433.t1 AT1G72770 30.060 336 159 12 79 351 177 499 2.88e-26 110
MS.gene064433.t1 AT2G34740 30.870 230 139 7 131 353 118 334 5.09e-26 107
MS.gene064433.t1 AT1G34750 34.066 182 106 4 131 306 65 238 1.52e-25 103
MS.gene064433.t1 AT4G27800 28.197 305 167 7 86 350 53 345 1.43e-24 104
MS.gene064433.t1 AT5G51760 30.714 280 134 8 125 351 107 379 2.37e-24 103
MS.gene064433.t1 AT5G51760 30.714 280 134 8 125 351 137 409 3.03e-24 103
MS.gene064433.t1 AT2G40860 31.707 246 137 7 67 297 366 595 4.43e-24 104
MS.gene064433.t1 AT4G28400 32.418 182 109 4 131 306 66 239 7.42e-24 99.8
MS.gene064433.t1 AT3G11410 29.259 270 152 7 75 317 86 343 2.71e-23 100
MS.gene064433.t1 AT1G17550 28.521 284 145 8 119 351 223 499 3.67e-23 101
MS.gene064433.t1 AT1G17550 28.521 284 145 8 119 351 223 499 3.67e-23 101
MS.gene064433.t1 AT5G02760 29.553 291 142 10 124 357 64 348 4.11e-23 99.8
MS.gene064433.t1 AT5G59220 31.330 233 136 8 101 317 119 343 1.77e-22 98.6
MS.gene064433.t1 AT3G06270 28.137 263 136 8 132 351 88 340 1.71e-21 94.7
MS.gene064433.t1 AT3G17090 28.956 297 146 11 130 367 82 372 3.26e-21 94.7
MS.gene064433.t1 AT4G27800 27.645 293 160 7 86 338 53 333 1.13e-20 92.4
MS.gene064433.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.14e-20 92.4
MS.gene064433.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.14e-20 92.4
MS.gene064433.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.14e-20 92.4
MS.gene064433.t1 AT4G27800 27.660 282 152 7 86 327 53 322 9.69e-20 89.7
MS.gene064433.t1 AT2G34740 31.016 187 113 6 131 310 114 291 1.21e-19 89.0
MS.gene064433.t1 AT3G16800 34.419 215 105 8 168 355 50 255 1.31e-19 87.8
MS.gene064433.t1 AT3G16800 34.419 215 105 8 168 355 50 255 1.31e-19 87.8
MS.gene064433.t1 AT2G34740 31.016 187 113 6 131 310 132 309 1.58e-19 89.0
MS.gene064433.t1 AT2G20050 27.757 263 137 8 132 351 143 395 2.60e-19 90.5
MS.gene064433.t1 AT2G20050 27.757 263 137 8 132 351 143 395 2.84e-19 90.5
MS.gene064433.t1 AT4G08260 31.839 223 116 8 131 351 18 206 4.45e-19 85.5
MS.gene064433.t1 AT5G06750 28.514 249 133 8 130 338 80 323 5.24e-19 88.2
MS.gene064433.t1 AT5G06750 28.514 249 133 8 130 338 80 323 5.24e-19 88.2
MS.gene064433.t1 AT3G51370 25.753 299 157 8 130 369 77 369 5.40e-19 88.2
MS.gene064433.t1 AT3G51370 25.753 299 157 8 130 369 77 369 5.40e-19 88.2
MS.gene064433.t1 AT3G17090 29.289 239 126 9 130 331 82 314 2.87e-18 85.1
MS.gene064433.t1 AT4G38520 26.298 289 150 8 130 360 79 362 3.51e-18 85.9
MS.gene064433.t1 AT4G38520 26.298 289 150 8 130 360 79 362 3.51e-18 85.9
MS.gene064433.t1 AT3G27140 31.624 234 101 8 131 362 18 194 5.22e-18 83.2
MS.gene064433.t1 AT5G26010 29.293 297 160 13 89 349 38 320 1.40e-17 83.6
MS.gene064433.t1 AT5G57050 29.688 256 130 10 56 266 58 308 1.51e-17 83.2
MS.gene064433.t1 AT3G12620 28.571 294 137 10 130 360 81 364 2.52e-17 83.2
MS.gene064433.t1 AT3G12620 28.571 294 137 10 130 360 81 364 2.52e-17 83.2
MS.gene064433.t1 AT1G68410 27.483 302 167 13 90 365 37 312 3.02e-17 83.6
MS.gene064433.t1 AT1G68410 27.483 302 167 13 90 365 37 312 3.02e-17 83.6
MS.gene064433.t1 AT1G68410 27.483 302 167 13 90 365 37 312 3.02e-17 83.6
MS.gene064433.t1 AT1G68410 27.483 302 167 13 90 365 37 312 3.02e-17 83.6
MS.gene064433.t1 AT5G19280 32.000 250 143 11 127 353 332 577 1.50e-16 81.6
MS.gene064433.t1 AT4G32950 29.279 222 111 8 130 318 70 278 8.05e-16 78.2
MS.gene064433.t1 AT3G55050 26.950 282 139 9 130 351 82 356 1.19e-15 78.2
MS.gene064433.t1 AT3G55050 26.950 282 139 9 130 351 82 356 1.19e-15 78.2
MS.gene064433.t1 AT3G02750 32.934 167 88 5 168 315 191 352 4.04e-15 77.0
MS.gene064433.t1 AT3G02750 32.934 167 88 5 168 315 191 352 4.04e-15 77.0
MS.gene064433.t1 AT5G66080 25.166 302 158 10 130 369 80 375 4.51e-15 76.6
MS.gene064433.t1 AT5G36250 28.922 204 113 6 157 339 171 363 6.95e-15 76.3
MS.gene064433.t1 AT5G27930 29.057 265 135 11 132 349 92 350 1.02e-14 75.5
MS.gene064433.t1 AT5G27930 29.057 265 135 11 132 349 92 350 1.02e-14 75.5
MS.gene064433.t1 AT5G19280 30.769 260 143 12 127 353 332 587 1.15e-14 75.9
MS.gene064433.t1 AT1G47380 27.203 261 150 10 131 367 63 307 1.61e-14 75.1
MS.gene064433.t1 AT3G51370 27.074 229 110 6 192 369 62 284 3.17e-14 73.2
MS.gene064433.t1 AT1G79630 30.986 213 110 8 191 377 151 352 3.35e-14 74.3
MS.gene064433.t1 AT1G79630 30.986 213 110 8 191 377 151 352 3.35e-14 74.3
MS.gene064433.t1 AT1G79630 34.752 141 69 4 191 313 111 246 3.79e-14 73.9
MS.gene064433.t1 AT1G79630 34.752 141 69 4 191 313 111 246 3.79e-14 73.9
MS.gene064433.t1 AT1G79630 34.752 141 69 4 191 313 111 246 3.79e-14 73.9
MS.gene064433.t1 AT1G79630 34.752 141 69 4 191 313 111 246 3.79e-14 73.9
MS.gene064433.t1 AT1G09160 25.703 249 145 10 131 355 67 299 4.01e-14 73.9
MS.gene064433.t1 AT1G09160 25.703 249 145 10 131 355 67 299 4.01e-14 73.9
MS.gene064433.t1 AT1G16220 34.043 141 70 4 191 313 198 333 5.96e-14 73.6
MS.gene064433.t1 AT1G79630 30.986 213 110 8 191 377 217 418 6.12e-14 73.6
MS.gene064433.t1 AT1G79630 30.986 213 110 8 191 377 221 422 6.40e-14 73.6
MS.gene064433.t1 AT1G22280 35.294 119 74 2 131 248 64 180 1.36e-13 69.7
MS.gene064433.t1 AT1G72770 28.448 232 113 7 79 264 177 401 4.53e-13 70.5
MS.gene064433.t1 AT1G72770 28.448 232 113 7 79 264 177 401 4.53e-13 70.5
MS.gene064433.t1 AT5G59220 30.000 180 108 6 101 264 119 296 5.27e-13 69.7
MS.gene064433.t1 AT4G33920 25.079 315 151 12 113 359 47 344 6.29e-13 70.1
MS.gene064433.t1 AT4G03415 28.994 169 96 4 167 316 169 332 7.26e-13 70.1
MS.gene064433.t1 AT4G03415 28.994 169 96 4 167 316 169 332 7.26e-13 70.1
MS.gene064433.t1 AT4G03415 28.994 169 96 4 167 316 169 332 7.26e-13 70.1
MS.gene064433.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.22e-12 68.9
MS.gene064433.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.22e-12 68.9
MS.gene064433.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.22e-12 68.9
MS.gene064433.t1 AT5G01700 27.393 303 158 12 132 386 29 317 2.33e-12 67.8
MS.gene064433.t1 AT5G01700 27.393 303 158 12 132 386 78 366 4.05e-12 67.4
MS.gene064433.t1 AT5G06750 30.726 179 87 6 192 338 68 241 6.25e-12 66.2
MS.gene064433.t1 AT5G36250 27.064 218 113 7 157 339 171 377 1.22e-11 66.2
MS.gene064433.t1 AT1G03590 28.571 168 96 5 168 316 160 322 1.53e-11 66.2

Find 112 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAATACAATTTGGTTTC+TGG 0.063429 3.2:+91512281 None:intergenic
GCTTTAACTGCACTTGTATT+TGG 0.106810 3.2:-91512727 MS.gene064433:CDS
GGATGATGAATTCTTGATTA+TGG 0.180271 3.2:-91512095 MS.gene064433:CDS
CCTCTTCCCGGAGCTTTCTA+TGG 0.196448 3.2:-91513430 MS.gene064433:CDS
AGTCTTTCTGAAATACAATT+TGG 0.227111 3.2:+91512274 None:intergenic
AGTCCTCAACAATGAGTTTA+AGG 0.235742 3.2:+91512854 None:intergenic
TCGCCTTCTAGTATTGTAAT+TGG 0.239407 3.2:+91514319 None:intergenic
GATAATGATGATGACAAATT+AGG 0.274200 3.2:-91514271 MS.gene064433:CDS
TGCAGCCAGTTTCAATCTAT+TGG 0.280570 3.2:+91514171 None:intergenic
AAGAGGACCTAAACAATATA+TGG 0.314058 3.2:-91513512 MS.gene064433:CDS
ACTTCAAATGTTCCTCTTCC+CGG 0.314733 3.2:-91513442 MS.gene064433:CDS
CTTTAACTGCACTTGTATTT+GGG 0.315593 3.2:-91512726 MS.gene064433:CDS
GATTGTTATGCATGTGGATA+TGG 0.322652 3.2:-91514353 None:intergenic
CTCATTGTTCAGGTGTTTGA+TGG 0.330417 3.2:-91512919 MS.gene064433:intron
AGAAAGCCTTACTTTACTTA+AGG 0.331641 3.2:-91511846 MS.gene064433:CDS
CTCTTCCCGGAGCTTTCTAT+GGG 0.334929 3.2:-91513429 MS.gene064433:CDS
TCATCTTCCATATATTGTTT+AGG 0.337678 3.2:+91513505 None:intergenic
TCTCCCCAGATCCTCCTTCC+AGG 0.343292 3.2:-91511910 MS.gene064433:CDS
GAGTGCCGAGCCAGAGTTGC+AGG 0.350375 3.2:-91512134 MS.gene064433:CDS
TCTATCCTGGAAGGAGGATC+TGG 0.353595 3.2:+91511905 None:intergenic
GAAACTGGCTGCATCAGATT+TGG 0.357220 3.2:-91514161 MS.gene064433:intron
AGGCACGTGAAACAGATAAT+TGG 0.379392 3.2:+91512203 None:intergenic
GAAAGCCTTACTTTACTTAA+GGG 0.380886 3.2:-91511845 MS.gene064433:CDS
GATGATGAATTCTTGATTAT+GGG 0.388378 3.2:-91512094 MS.gene064433:CDS
TTATCTGTTTCACGTGCCTT+AGG 0.408033 3.2:-91512199 MS.gene064433:CDS
ATTGTATTTCAGAAAGACTA+AGG 0.408240 3.2:-91512270 MS.gene064433:CDS
AATCTTAAACCAACCACAAT+TGG 0.411304 3.2:-91514238 MS.gene064433:CDS
AATAAGATTTCCTGCAACTC+TGG 0.414668 3.2:+91512124 None:intergenic
TAGCTCCAATAGATTGAAAC+TGG 0.425800 3.2:-91514176 MS.gene064433:CDS
CAACTTCCTGATCGAAATAT+CGG 0.427335 3.2:+91513541 None:intergenic
AGTGTGGATGCAGAGGTTAC+TGG 0.429225 3.2:-91513601 MS.gene064433:CDS
TAACTCATGTGATAATTTAA+CGG 0.431939 3.2:-91511948 MS.gene064433:CDS
TGCTGTGACCATGGCAAGAA+AGG 0.436779 3.2:-91512035 MS.gene064433:CDS
TTTCACGTGCCTTAGGTGAC+TGG 0.440786 3.2:-91512192 MS.gene064433:CDS
CTCAAACTGGAAGCATGTCT+TGG 0.449022 3.2:+91514208 None:intergenic
AACTCTCTCGAACACCTTTG+AGG 0.459406 3.2:+91511992 None:intergenic
CCTCCAATTACAATACTAGA+AGG 0.459410 3.2:-91514322 MS.gene064433:CDS
AGATACCTCCTACTCGAGTC+AGG 0.468751 3.2:-91511883 MS.gene064433:CDS
CAAAGGACAGGCAGAACCCT+TGG 0.469942 3.2:+91512156 None:intergenic
ATACACCCTTAAGTAAAGTA+AGG 0.471953 3.2:+91511840 None:intergenic
AGAGGAGATATCAAGCGAAC+TGG 0.473514 3.2:+91512759 None:intergenic
AGTAGGAGGTATCTCTATCC+TGG 0.476334 3.2:+91511892 None:intergenic
CCATAGAAAGCTCCGGGAAG+AGG 0.477635 3.2:+91513430 None:intergenic
GCTAAGGCTATGTCTCAAAC+TGG 0.485089 3.2:+91514195 None:intergenic
GTTCAGGTGTTTGATGGCCA+TGG 0.485255 3.2:-91512913 MS.gene064433:intron
TTCTTGATTATGGGCTGTGA+TGG 0.488636 3.2:-91512085 MS.gene064433:CDS
AGTTCGCTTGATATCTCCTC+TGG 0.489115 3.2:-91512757 MS.gene064433:CDS
CTATCCTGGAAGGAGGATCT+GGG 0.492994 3.2:+91511906 None:intergenic
AAACTGGAAGCATGTCTTGG+AGG 0.497115 3.2:+91514211 None:intergenic
AACATGGTAATTGCAAATGC+GGG 0.500584 3.2:-91512358 MS.gene064433:CDS
TCTTGGAGGTTTACCAATTG+TGG 0.502037 3.2:+91514225 None:intergenic
CCTTCTAGTATTGTAATTGG+AGG 0.506725 3.2:+91514322 None:intergenic
TCTCAGTTTCCAACTTGTGT+GGG 0.508801 3.2:-91512832 MS.gene064433:CDS
GTTTCCAACTTGTGTGGGGA+AGG 0.512554 3.2:-91512827 MS.gene064433:CDS
CTCTCAGTTTCCAACTTGTG+TGG 0.515279 3.2:-91512833 MS.gene064433:CDS
GGAGGTTTACCAATTGTGGT+TGG 0.517867 3.2:+91514229 None:intergenic
TGATAATTTAACGGTTATTG+TGG 0.519496 3.2:-91511939 MS.gene064433:CDS
GTTTCAATCTATTGGAGCTA+AGG 0.520235 3.2:+91514179 None:intergenic
CATCAACTCCTTTCTTGCCA+TGG 0.520543 3.2:+91512027 None:intergenic
ACGAACCCCATAGAAAGCTC+CGG 0.522866 3.2:+91513423 None:intergenic
ATTGCCTTCCCCACACAAGT+TGG 0.523655 3.2:+91512823 None:intergenic
TTTGTTCCGATATTTCGATC+AGG 0.526490 3.2:-91513547 MS.gene064433:CDS
CTTAGGTGACTGGCACATGA+AGG 0.537656 3.2:-91512182 MS.gene064433:CDS
CTTGGTGGGGTGGTATATGA+TGG 0.541375 3.2:-91512238 MS.gene064433:CDS
TTGCCATGGTCACAGCACCT+TGG 0.547224 3.2:+91512041 None:intergenic
AAAGGACAGGCAGAACCCTT+GGG 0.548931 3.2:+91512157 None:intergenic
GGGGATTGTCGAGCTGTACT+GGG 0.549473 3.2:-91512337 MS.gene064433:CDS
TCTTACAAACAAAGCAGCAT+CGG 0.551613 3.2:+91512885 None:intergenic
GATTTCCTGCAACTCTGGCT+CGG 0.555836 3.2:+91512129 None:intergenic
AACTCTGGCTCGGCACTCAA+AGG 0.558498 3.2:+91512139 None:intergenic
CTTCATGTGCCAGTCACCTA+AGG 0.565352 3.2:+91512183 None:intergenic
CTGGCACATGAAGGGTCCCA+AGG 0.566388 3.2:-91512173 MS.gene064433:CDS
CGAGCTGTACTGGGAAGGCG+AGG 0.567777 3.2:-91512328 MS.gene064433:CDS
CTCCTCCTGACTCGAGTAGG+AGG 0.568578 3.2:+91511878 None:intergenic
TCAGGAAGTTGTGCTGAAAG+AGG 0.568890 3.2:-91513529 MS.gene064433:CDS
CTCAGTTTCCAACTTGTGTG+GGG 0.570395 3.2:-91512831 MS.gene064433:CDS
CGAACCCCATAGAAAGCTCC+GGG 0.570787 3.2:+91513424 None:intergenic
AATCAAGAATTCATCATCCT+CGG 0.573522 3.2:+91512099 None:intergenic
TTAGGTGACTGGCACATGAA+GGG 0.574484 3.2:-91512181 MS.gene064433:CDS
TCAAAGGTGTTCGAGAGAGT+TGG 0.583518 3.2:-91511990 MS.gene064433:CDS
TTATGGGCTGTGATGGCCTG+TGG 0.583612 3.2:-91512078 MS.gene064433:CDS
TGGCTCGGCACTCAAAGGAC+AGG 0.584284 3.2:+91512144 None:intergenic
GAACATGGTAATTGCAAATG+CGG 0.589776 3.2:-91512359 MS.gene064433:CDS
GTATATGATGGATACTTGAA+TGG 0.591854 3.2:-91512226 MS.gene064433:CDS
TTTCATCATTGACAGGAACA+TGG 0.594549 3.2:-91512374 MS.gene064433:intron
TATGGGCTGTGATGGCCTGT+GGG 0.595224 3.2:-91512077 MS.gene064433:CDS
AAGCAGCATCGGTTCCTCCA+TGG 0.595456 3.2:+91512896 None:intergenic
TAACCAAGGTGCTGTGACCA+TGG 0.601204 3.2:-91512044 MS.gene064433:CDS
TAACTGCACTTGTATTTGGG+AGG 0.603179 3.2:-91512723 MS.gene064433:intron
TGGCACATGAAGGGTCCCAA+GGG 0.607482 3.2:-91512172 MS.gene064433:CDS
ATTGTCGAGCTGTACTGGGA+AGG 0.608398 3.2:-91512333 MS.gene064433:CDS
CATCCTTAAACTCATTGTTG+AGG 0.608747 3.2:-91512857 MS.gene064433:CDS
GGTTACTCATTACATCCCAC+AGG 0.609793 3.2:+91512062 None:intergenic
GGAAGAGATTGTTATGCATG+TGG 0.615504 3.2:-91514359 None:intergenic
ATACTCCTCCTGACTCGAGT+AGG 0.615691 3.2:+91511875 None:intergenic
TTCGAGAGAGTTGGTCAGAG+AGG 0.616595 3.2:-91511981 MS.gene064433:CDS
TACAAGTGCAGTTAAAGCGG+TGG 0.621319 3.2:+91512732 None:intergenic
GATGATCTTACTCAACACAT+AGG 0.621620 3.2:-91513469 MS.gene064433:CDS
AGTTAAAGCGGTGGTGCCAG+AGG 0.623929 3.2:+91512741 None:intergenic
ACATGGTAATTGCAAATGCG+GGG 0.624191 3.2:-91512357 MS.gene064433:CDS
GGAGGTATCTCTATCCTGGA+AGG 0.628762 3.2:+91511896 None:intergenic
TGATACATAATGATCCTCAA+AGG 0.634106 3.2:-91512006 MS.gene064433:CDS
AAATACAAGTGCAGTTAAAG+CGG 0.641797 3.2:+91512729 None:intergenic
GAGCTGTACTGGGAAGGCGA+GGG 0.651369 3.2:-91512327 MS.gene064433:CDS
CATGGTAATTGCAAATGCGG+GGG 0.660694 3.2:-91512356 MS.gene064433:CDS
GCAGGAAATCTTATTGACCG+AGG 0.667282 3.2:-91512116 MS.gene064433:CDS
TATCCTGGAAGGAGGATCTG+GGG 0.673089 3.2:+91511907 None:intergenic
GGTATCTCTATCCTGGAAGG+AGG 0.683404 3.2:+91511899 None:intergenic
CAGGTGTTTGATGGCCATGG+AGG 0.686582 3.2:-91512910 MS.gene064433:CDS
TACCTCCTACTCGAGTCAGG+AGG 0.690653 3.2:-91511880 MS.gene064433:CDS
TCTTCCCGGAGCTTTCTATG+GGG 0.694705 3.2:-91513428 MS.gene064433:intron
TGGGATGTAATGAGTAACCA+AGG 0.735826 3.2:-91512058 MS.gene064433:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATATTTTGACATTT+TGG - chr3.2:91512098-91512117 MS.gene064433:CDS 10.0%
!!! CATAAAATATATTGTTTTAA+TGG - chr3.2:91513150-91513169 MS.gene064433:intron 10.0%
!! AAAATTAATGAAAAGAATCA+TGG + chr3.2:91513499-91513518 None:intergenic 15.0%
!! AATGTTTGGAAACAATATAA+TGG - chr3.2:91513606-91513625 MS.gene064433:intron 20.0%
!! AGTAAAGTATAAAGTAGTAT+TGG + chr3.2:91512484-91512503 None:intergenic 20.0%
!! ATTGGTTAAGGAATAAAAAA+AGG - chr3.2:91512266-91512285 MS.gene064433:CDS 20.0%
!! GATGAAATTTCACAAATTTA+GGG + chr3.2:91513788-91513807 None:intergenic 20.0%
!! TAAAAAAAGGTAAGTTTGTA+TGG - chr3.2:91512279-91512298 MS.gene064433:CDS 20.0%
!! TAACATGCAAACAAAAATAA+AGG + chr3.2:91513209-91513228 None:intergenic 20.0%
!! TAACTCATGTGATAATTTAA+CGG - chr3.2:91514227-91514246 MS.gene064433:CDS 20.0%
!! TGATGAAATTTCACAAATTT+AGG + chr3.2:91513789-91513808 None:intergenic 20.0%
!!! AGATCCTATTATTTTTAAGT+GGG - chr3.2:91513560-91513579 MS.gene064433:CDS 20.0%
!!! CATTAATTTTAGCAAGTTTT+AGG - chr3.2:91513509-91513528 MS.gene064433:CDS 20.0%
!!! CATTTGTTTATTTTGCTTAA+AGG - chr3.2:91512886-91512905 MS.gene064433:CDS 20.0%
!!! TAAGATAAACTTTCCTTTTA+TGG - chr3.2:91512311-91512330 MS.gene064433:CDS 20.0%
!!! TAGATCCTATTATTTTTAAG+TGG - chr3.2:91513559-91513578 MS.gene064433:CDS 20.0%
! AAACAACCAATAAAATCTGA+AGG + chr3.2:91513537-91513556 None:intergenic 25.0%
! AACACCCACTTAAAAATAAT+AGG + chr3.2:91513567-91513586 None:intergenic 25.0%
! ATTGTATTTCAGAAAGACTA+AGG - chr3.2:91513905-91513924 MS.gene064433:intron 25.0%
! CTAACTAGTAATCTAAACAT+TGG + chr3.2:91512346-91512365 None:intergenic 25.0%
! GATGATGAATTCTTGATTAT+GGG - chr3.2:91514081-91514100 MS.gene064433:intron 25.0%
! TCATCTTCCATATATTGTTT+AGG + chr3.2:91512673-91512692 None:intergenic 25.0%
! TGATAATTTAACGGTTATTG+TGG - chr3.2:91514236-91514255 MS.gene064433:CDS 25.0%
! TTCTGATGGAAATTAAACAT+CGG + chr3.2:91513064-91513083 None:intergenic 25.0%
! TTGGTTAATGAATCCATAAA+AGG + chr3.2:91512327-91512346 None:intergenic 25.0%
!! GATAATGATGATGACAAATT+AGG - chr3.2:91511904-91511923 MS.gene064433:CDS 25.0%
!! TTTTTATTCCTTAACCAATG+TGG + chr3.2:91512265-91512284 None:intergenic 25.0%
!!! AGTCTTTCTGAAATACAATT+TGG + chr3.2:91513904-91513923 None:intergenic 25.0%
AAATACAAGTGCAGTTAAAG+CGG + chr3.2:91513449-91513468 None:intergenic 30.0%
AAGAGGACCTAAACAATATA+TGG - chr3.2:91512663-91512682 MS.gene064433:intron 30.0%
AATCAAGAATTCATCATCCT+CGG + chr3.2:91514079-91514098 None:intergenic 30.0%
AATCATGGAATCATAATGCA+AGG + chr3.2:91513484-91513503 None:intergenic 30.0%
AATCTTAAACCAACCACAAT+TGG - chr3.2:91511937-91511956 MS.gene064433:CDS 30.0%
AGAAAGCCTTACTTTACTTA+AGG - chr3.2:91514329-91514348 MS.gene064433:CDS 30.0%
AGACTAAGGATTGAAAAACT+TGG - chr3.2:91513919-91513938 MS.gene064433:intron 30.0%
ATACACCCTTAAGTAAAGTA+AGG + chr3.2:91514338-91514357 None:intergenic 30.0%
ATTGGAAATACAAAGAGTAG+TGG + chr3.2:91512942-91512961 None:intergenic 30.0%
CATGCAAACAAAAATAAAGG+TGG + chr3.2:91513206-91513225 None:intergenic 30.0%
CTGTTAAGAATAGTAATGCA+TGG + chr3.2:91513033-91513052 None:intergenic 30.0%
CTTTAACTGCACTTGTATTT+GGG - chr3.2:91513449-91513468 MS.gene064433:CDS 30.0%
GAAAGCCTTACTTTACTTAA+GGG - chr3.2:91514330-91514349 MS.gene064433:CDS 30.0%
GATTAGGACAAATGAGTAAT+AGG - chr3.2:91513099-91513118 MS.gene064433:intron 30.0%
GGATGATGAATTCTTGATTA+TGG - chr3.2:91514080-91514099 MS.gene064433:intron 30.0%
TAAGGATTGAAAAACTTGGT+GGG - chr3.2:91513923-91513942 MS.gene064433:intron 30.0%
TACAACGAATATGACAACAT+AGG + chr3.2:91512508-91512527 None:intergenic 30.0%
TACTATTCTTAACAGAATCG+TGG - chr3.2:91513038-91513057 MS.gene064433:intron 30.0%
TCATATTCGTTGTAAAGCTT+AGG - chr3.2:91512514-91512533 MS.gene064433:intron 30.0%
TGATACATAATGATCCTCAA+AGG - chr3.2:91514169-91514188 MS.gene064433:CDS 30.0%
TGTGAAATTTCATCATTGAC+AGG - chr3.2:91513794-91513813 MS.gene064433:intron 30.0%
TTCTTCAACCGTAATTTATC+CGG - chr3.2:91513636-91513655 MS.gene064433:intron 30.0%
! CTGAAATACAATTTGGTTTC+TGG + chr3.2:91513897-91513916 None:intergenic 30.0%
! TGTTTTTCCCGGATAAATTA+CGG + chr3.2:91513647-91513666 None:intergenic 30.0%
!! GTATATGATGGATACTTGAA+TGG - chr3.2:91513949-91513968 MS.gene064433:intron 30.0%
AAACACCTGAACAATGAGTA+TGG + chr3.2:91513254-91513273 None:intergenic 35.0%
AAATGAGTAATAGGCTAGAG+AGG - chr3.2:91513108-91513127 MS.gene064433:intron 35.0%
AACACCTGAACAATGAGTAT+GGG + chr3.2:91513253-91513272 None:intergenic 35.0%
AACATGGTAATTGCAAATGC+GGG - chr3.2:91513817-91513836 MS.gene064433:intron 35.0%
AATAAGATTTCCTGCAACTC+TGG + chr3.2:91514054-91514073 None:intergenic 35.0%
AATAGTAATGCATGGAGAAG+AGG + chr3.2:91513025-91513044 None:intergenic 35.0%
AGTCCTCAACAATGAGTTTA+AGG + chr3.2:91513324-91513343 None:intergenic 35.0%
AGTTGACATTGCTGAAGATT+AGG - chr3.2:91513083-91513102 MS.gene064433:intron 35.0%
ATGTGTGTATCAGTTTAGCA+AGG + chr3.2:91512432-91512451 None:intergenic 35.0%
CAACTTCCTGATCGAAATAT+CGG + chr3.2:91512637-91512656 None:intergenic 35.0%
CATCCTTAAACTCATTGTTG+AGG - chr3.2:91513318-91513337 MS.gene064433:intron 35.0%
CCTCCAATTACAATACTAGA+AGG - chr3.2:91511853-91511872 MS.gene064433:CDS 35.0%
CCTTCTAGTATTGTAATTGG+AGG + chr3.2:91511856-91511875 None:intergenic 35.0%
CGGGAAAAACATAAGATTCT+GGG - chr3.2:91513656-91513675 MS.gene064433:intron 35.0%
CTAAGGATTGAAAAACTTGG+TGG - chr3.2:91513922-91513941 MS.gene064433:intron 35.0%
GAACATGGTAATTGCAAATG+CGG - chr3.2:91513816-91513835 MS.gene064433:intron 35.0%
GATGATCTTACTCAACACAT+AGG - chr3.2:91512706-91512725 MS.gene064433:intron 35.0%
GCATTTATGTCTCATCTCAT+TGG - chr3.2:91513682-91513701 MS.gene064433:intron 35.0%
GCTTTAACTGCACTTGTATT+TGG - chr3.2:91513448-91513467 MS.gene064433:CDS 35.0%
GTTTCAATCTATTGGAGCTA+AGG + chr3.2:91511999-91512018 None:intergenic 35.0%
TAGCTCCAATAGATTGAAAC+TGG - chr3.2:91511999-91512018 MS.gene064433:CDS 35.0%
TATGCAGTACGATCAATGAT+TGG + chr3.2:91512960-91512979 None:intergenic 35.0%
TCGCCTTCTAGTATTGTAAT+TGG + chr3.2:91511859-91511878 None:intergenic 35.0%
TCTTACAAACAAAGCAGCAT+CGG + chr3.2:91513293-91513312 None:intergenic 35.0%
TCTTCAACCGTAATTTATCC+GGG - chr3.2:91513637-91513656 MS.gene064433:intron 35.0%
TTTAAGTGGGTGTTAGAACA+CGG - chr3.2:91513573-91513592 MS.gene064433:CDS 35.0%
TTTCATCATTGACAGGAACA+TGG - chr3.2:91513801-91513820 MS.gene064433:intron 35.0%
TTTGTTCCGATATTTCGATC+AGG - chr3.2:91512628-91512647 MS.gene064433:intron 35.0%
! AACAAGTTCCACATTGGTTA+AGG - chr3.2:91512254-91512273 MS.gene064433:CDS 35.0%
! AAGGATTGAAAAACTTGGTG+GGG - chr3.2:91513924-91513943 MS.gene064433:intron 35.0%
! CCAGAATCTTATGTTTTTCC+CGG + chr3.2:91513658-91513677 None:intergenic 35.0%
! TAGGTGCCTTCAGATTTTAT+TGG - chr3.2:91513528-91513547 MS.gene064433:CDS 35.0%
!! CACAAAGCTTGTTATCTAAC+AGG + chr3.2:91512862-91512881 None:intergenic 35.0%
!!! CTCTCTCTTTTTTAAGAGTG+TGG - chr3.2:91512558-91512577 MS.gene064433:intron 35.0%
ACATGGTAATTGCAAATGCG+GGG - chr3.2:91513818-91513837 MS.gene064433:intron 40.0%
ACTTCAAATGTTCCTCTTCC+CGG - chr3.2:91512733-91512752 MS.gene064433:CDS 40.0%
AGGCACGTGAAACAGATAAT+TGG + chr3.2:91513975-91513994 None:intergenic 40.0%
ATGTCTCATCTCATTGGAGA+TGG - chr3.2:91513688-91513707 MS.gene064433:intron 40.0%
CCAAGTAACAAGTTCCACAT+TGG - chr3.2:91512248-91512267 MS.gene064433:CDS 40.0%
CCGGGAAAAACATAAGATTC+TGG - chr3.2:91513655-91513674 MS.gene064433:intron 40.0%
CTCATTGTTCAGGTGTTTGA+TGG - chr3.2:91513256-91513275 MS.gene064433:intron 40.0%
GTAACCCATACTCATTGTTC+AGG - chr3.2:91513246-91513265 MS.gene064433:intron 40.0%
GTTTCCAAACATTGACAGAG+CGG + chr3.2:91513599-91513618 None:intergenic 40.0%
TAACTGCACTTGTATTTGGG+AGG - chr3.2:91513452-91513471 MS.gene064433:CDS 40.0%
TCAGCAATGTCAACTTCTGA+TGG + chr3.2:91513078-91513097 None:intergenic 40.0%
TCTCAGTTTCCAACTTGTGT+GGG - chr3.2:91513343-91513362 MS.gene064433:intron 40.0%
TCTTGGAGGTTTACCAATTG+TGG + chr3.2:91511953-91511972 None:intergenic 40.0%
TGCAGCCAGTTTCAATCTAT+TGG + chr3.2:91512007-91512026 None:intergenic 40.0%
TGGGATGTAATGAGTAACCA+AGG - chr3.2:91514117-91514136 MS.gene064433:intron 40.0%
TTATCTGTTTCACGTGCCTT+AGG - chr3.2:91513976-91513995 MS.gene064433:intron 40.0%
! AGTATGGGTTACTGAACTGT+TGG + chr3.2:91513238-91513257 None:intergenic 40.0%
! TTCTTGATTATGGGCTGTGA+TGG - chr3.2:91514090-91514109 MS.gene064433:intron 40.0%
!! CCAATGTGGAACTTGTTACT+TGG + chr3.2:91512251-91512270 None:intergenic 40.0%
!! GCTTGTTATCTAACAGGTAC+AGG + chr3.2:91512856-91512875 None:intergenic 40.0%
!! TTTTAAGAGTGTGGATGCAG+AGG - chr3.2:91512567-91512586 MS.gene064433:intron 40.0%
AAAGGGGAAGAAACTCTGCT+AGG + chr3.2:91512989-91513008 None:intergenic 45.0%
AACTCTCTCGAACACCTTTG+AGG + chr3.2:91514186-91514205 None:intergenic 45.0%
AAGGGGAAGAAACTCTGCTA+GGG + chr3.2:91512988-91513007 None:intergenic 45.0%
AGAGGAGATATCAAGCGAAC+TGG + chr3.2:91513419-91513438 None:intergenic 45.0%
AGTTCGCTTGATATCTCCTC+TGG - chr3.2:91513418-91513437 MS.gene064433:intron 45.0%
CATCAACTCCTTTCTTGCCA+TGG + chr3.2:91514151-91514170 None:intergenic 45.0%
CATGGTAATTGCAAATGCGG+GGG - chr3.2:91513819-91513838 MS.gene064433:intron 45.0%
CTCAGTTTCCAACTTGTGTG+GGG - chr3.2:91513344-91513363 MS.gene064433:intron 45.0%
CTCTCAGTTTCCAACTTGTG+TGG - chr3.2:91513342-91513361 MS.gene064433:intron 45.0%
GAAACTGGCTGCATCAGATT+TGG - chr3.2:91512014-91512033 MS.gene064433:CDS 45.0%
GCAGGAAATCTTATTGACCG+AGG - chr3.2:91514059-91514078 MS.gene064433:intron 45.0%
GCTAAGGCTATGTCTCAAAC+TGG + chr3.2:91511983-91512002 None:intergenic 45.0%
GGAGGTTTACCAATTGTGGT+TGG + chr3.2:91511949-91511968 None:intergenic 45.0%
GGTTACTCATTACATCCCAC+AGG + chr3.2:91514116-91514135 None:intergenic 45.0%
TACAAGTGCAGTTAAAGCGG+TGG + chr3.2:91513446-91513465 None:intergenic 45.0%
TCAGGAAGTTGTGCTGAAAG+AGG - chr3.2:91512646-91512665 MS.gene064433:intron 45.0%
TTAGGTGACTGGCACATGAA+GGG - chr3.2:91513994-91514013 MS.gene064433:intron 45.0%
! AAACTGGAAGCATGTCTTGG+AGG + chr3.2:91511967-91511986 None:intergenic 45.0%
! CTCAAACTGGAAGCATGTCT+TGG + chr3.2:91511970-91511989 None:intergenic 45.0%
! GATTGAAAAACTTGGTGGGG+TGG - chr3.2:91513927-91513946 MS.gene064433:intron 45.0%
!! AGTAGGAGGTATCTCTATCC+TGG + chr3.2:91514286-91514305 None:intergenic 45.0%
!! TCAAAGGTGTTCGAGAGAGT+TGG - chr3.2:91514185-91514204 MS.gene064433:CDS 45.0%
AAAGGACAGGCAGAACCCTT+GGG + chr3.2:91514021-91514040 None:intergenic 50.0%
ACGAACCCCATAGAAAGCTC+CGG + chr3.2:91512755-91512774 None:intergenic 50.0%
AGAGGCGAAAGAGGGAACAA+AGG + chr3.2:91513007-91513026 None:intergenic 50.0%
AGATACCTCCTACTCGAGTC+AGG - chr3.2:91514292-91514311 MS.gene064433:CDS 50.0%
AGGCGAAAGAGGGAACAAAG+GGG + chr3.2:91513005-91513024 None:intergenic 50.0%
AGTGTGGATGCAGAGGTTAC+TGG - chr3.2:91512574-91512593 MS.gene064433:intron 50.0%
ATTGCCTTCCCCACACAAGT+TGG + chr3.2:91513355-91513374 None:intergenic 50.0%
ATTGTCGAGCTGTACTGGGA+AGG - chr3.2:91513842-91513861 MS.gene064433:intron 50.0%
CATGGAGAAGAGGCGAAAGA+GGG + chr3.2:91513015-91513034 None:intergenic 50.0%
CTATCCTGGAAGGAGGATCT+GGG + chr3.2:91514272-91514291 None:intergenic 50.0%
CTCTTCCCGGAGCTTTCTAT+GGG - chr3.2:91512746-91512765 MS.gene064433:CDS 50.0%
CTTAGGTGACTGGCACATGA+AGG - chr3.2:91513993-91514012 MS.gene064433:intron 50.0%
CTTCATGTGCCAGTCACCTA+AGG + chr3.2:91513995-91514014 None:intergenic 50.0%
CTTGGTGGGGTGGTATATGA+TGG - chr3.2:91513937-91513956 MS.gene064433:intron 50.0%
GAGATGGAAGAGAGAAGCTG+CGG - chr3.2:91513704-91513723 MS.gene064433:intron 50.0%
GAGGCGAAAGAGGGAACAAA+GGG + chr3.2:91513006-91513025 None:intergenic 50.0%
GATTTCCTGCAACTCTGGCT+CGG + chr3.2:91514049-91514068 None:intergenic 50.0%
GGTATCTCTATCCTGGAAGG+AGG + chr3.2:91514279-91514298 None:intergenic 50.0%
GTTTCCAACTTGTGTGGGGA+AGG - chr3.2:91513348-91513367 MS.gene064433:intron 50.0%
TATCCTGGAAGGAGGATCTG+GGG + chr3.2:91514271-91514290 None:intergenic 50.0%
TCTATCCTGGAAGGAGGATC+TGG + chr3.2:91514273-91514292 None:intergenic 50.0%
TCTTCCCGGAGCTTTCTATG+GGG - chr3.2:91512747-91512766 MS.gene064433:CDS 50.0%
TGCTGTGACCATGGCAAGAA+AGG - chr3.2:91514140-91514159 MS.gene064433:intron 50.0%
TTTCACGTGCCTTAGGTGAC+TGG - chr3.2:91513983-91514002 MS.gene064433:intron 50.0%
! ATACTCCTCCTGACTCGAGT+AGG + chr3.2:91514303-91514322 None:intergenic 50.0%
! GTTCAGGTGTTTGATGGCCA+TGG - chr3.2:91513262-91513281 MS.gene064433:intron 50.0%
! TTCGAGAGAGTTGGTCAGAG+AGG - chr3.2:91514194-91514213 MS.gene064433:CDS 50.0%
!! GGAGGTATCTCTATCCTGGA+AGG + chr3.2:91514282-91514301 None:intergenic 50.0%
!! TAACCAAGGTGCTGTGACCA+TGG - chr3.2:91514131-91514150 MS.gene064433:intron 50.0%
ACGGCCGCTCTGTCAATGTT+TGG - chr3.2:91513592-91513611 MS.gene064433:CDS 55.0%
CAAAGGACAGGCAGAACCCT+TGG + chr3.2:91514022-91514041 None:intergenic 55.0%
CCATAGAAAGCTCCGGGAAG+AGG + chr3.2:91512748-91512767 None:intergenic 55.0%
CCTCTTCCCGGAGCTTTCTA+TGG - chr3.2:91512745-91512764 MS.gene064433:CDS 55.0%
CGAACCCCATAGAAAGCTCC+GGG + chr3.2:91512754-91512773 None:intergenic 55.0%
GCATGGAGAAGAGGCGAAAG+AGG + chr3.2:91513016-91513035 None:intergenic 55.0%
GGGGATTGTCGAGCTGTACT+GGG - chr3.2:91513838-91513857 MS.gene064433:intron 55.0%
TACCTCCTACTCGAGTCAGG+AGG - chr3.2:91514295-91514314 MS.gene064433:CDS 55.0%
TGGCACATGAAGGGTCCCAA+GGG - chr3.2:91514003-91514022 MS.gene064433:intron 55.0%
TTGCCATGGTCACAGCACCT+TGG + chr3.2:91514137-91514156 None:intergenic 55.0%
! AGTTAAAGCGGTGGTGCCAG+AGG + chr3.2:91513437-91513456 None:intergenic 55.0%
! CAGGTGTTTGATGGCCATGG+AGG - chr3.2:91513265-91513284 MS.gene064433:intron 55.0%
! TATGGGCTGTGATGGCCTGT+GGG - chr3.2:91514098-91514117 MS.gene064433:intron 55.0%
! TTATGGGCTGTGATGGCCTG+TGG - chr3.2:91514097-91514116 MS.gene064433:intron 55.0%
!! AACTCTGGCTCGGCACTCAA+AGG + chr3.2:91514039-91514058 None:intergenic 55.0%
!! AAGCAGCATCGGTTCCTCCA+TGG + chr3.2:91513282-91513301 None:intergenic 55.0%
CTGGCACATGAAGGGTCCCA+AGG - chr3.2:91514002-91514021 MS.gene064433:intron 60.0%
GAGCTGTACTGGGAAGGCGA+GGG - chr3.2:91513848-91513867 MS.gene064433:intron 60.0%
GGGGGATTGTCGAGCTGTAC+TGG - chr3.2:91513837-91513856 MS.gene064433:intron 60.0%
TCTCCCCAGATCCTCCTTCC+AGG - chr3.2:91514265-91514284 MS.gene064433:CDS 60.0%
! CTCCTCCTGACTCGAGTAGG+AGG + chr3.2:91514300-91514319 None:intergenic 60.0%
! TGGCTCGGCACTCAAAGGAC+AGG + chr3.2:91514034-91514053 None:intergenic 60.0%
CGAGCTGTACTGGGAAGGCG+AGG - chr3.2:91513847-91513866 MS.gene064433:intron 65.0%
!! GAGTGCCGAGCCAGAGTTGC+AGG - chr3.2:91514041-91514060 MS.gene064433:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 91511829 91514368 91511829 ID=MS.gene064433
chr3.2 mRNA 91511829 91514368 91511829 ID=MS.gene064433.t1;Parent=MS.gene064433
chr3.2 exon 91514162 91514368 91514162 ID=MS.gene064433.t1.exon1;Parent=MS.gene064433.t1
chr3.2 CDS 91514162 91514368 91514162 ID=cds.MS.gene064433.t1;Parent=MS.gene064433.t1
chr3.2 exon 91513429 91513623 91513429 ID=MS.gene064433.t1.exon2;Parent=MS.gene064433.t1
chr3.2 CDS 91513429 91513623 91513429 ID=cds.MS.gene064433.t1;Parent=MS.gene064433.t1
chr3.2 exon 91512724 91512929 91512724 ID=MS.gene064433.t1.exon3;Parent=MS.gene064433.t1
chr3.2 CDS 91512724 91512929 91512724 ID=cds.MS.gene064433.t1;Parent=MS.gene064433.t1
chr3.2 exon 91511829 91512381 91511829 ID=MS.gene064433.t1.exon4;Parent=MS.gene064433.t1
chr3.2 CDS 91511829 91512381 91511829 ID=cds.MS.gene064433.t1;Parent=MS.gene064433.t1
Gene Sequence

>MS.gene064433

ATGCATGTGGATATGGATTATTCTCCTCCAATTACAATACTAGAAGGCGATGATTACAACAAAGACAATGATAATGATAATGATGATGACAAATTAGGAGATTTCAATAATCTTAAACCAACCACAATTGGTAAACCTCCAAGACATGCTTCCAGTTTGAGACATAGCCTTAGCTCCAATAGATTGAAACTGGCTGCATCAGATTTGGTATGTTATTCTACTTTTTCATAAAGTTTGATTTTTTTGCTAATATTTTTTTTTTTTGTAATAATTATATATTTTGACATTTTGGTTCATGTCATGTTTTGTGTCTTTGTTGTTCTTACTTTGTAGTATTAATTTCTTTTGTAGCTTTGCTTGCTATAATTTTCAGATAATTTTAAATTTTCGTTTATGTTTTTATTACAAAGAAAATGCTACCAAGTAACAAGTTCCACATTGGTTAAGGAATAAAAAAAGGTAAGTTTGTATGGAAGATTTGTTAAGATAAACTTTCCTTTTATGGATTCATTAACCAATGTTTAGATTACTAGTTAGCAAGATACTACTTGTTAGTTTTTTTTAGCAAGCTTTAATGCTCTTGTTAGTCTTCATAATTTACCTTGCTAAACTGATACACACATAAATGCTGTGAACTTCATTTCAATTTTTACCAATACTACTTTATACTTTACTTCCTATGTTGTCATATTCGTTGTAAAGCTTAGGTTATCTGATTTGTCTGTTTCTCTCTCTCTTTTTTAAGAGTGTGGATGCAGAGGTTACTGGAAGTAAGTCATCTTCTGAAAACAAGACAGATTTTGTTCCGATATTTCGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGATGAACACGTATGTATAGATGATCTTACTCAACACATAGGTTCTACTTCAAATGTTCCTCTTCCCGGAGCTTTCTATGGGGTTCGTATGTTATTCTTACTCGAGATTACAGTTTATATACATTTGATATGATATAAAGCTTCATATTTACATTCACATGTTGAACCTGTACCTGTTAGATAACAAGCTTTGTGTTTTCATTTGTTTATTTTGCTTAAAGGTACTTTTGTTACTTTTTGTTCATACATTTACCACTACTCTTTGTATTTCCAATCATTGATCGTACTGCATATTGTACCCTAGCAGAGTTTCTTCCCCTTTGTTCCCTCTTTCGCCTCTTCTCCATGCATTACTATTCTTAACAGAATCGTGGCCGATGTTTAATTTCCATCAGAAGTTGACATTGCTGAAGATTAGGACAAATGAGTAATAGGCTAGAGAGGTCTTTACTTTTGATATTTTCATAAAATATATTGTTTTAATGGATTGAAGTTTGTTGCTCATACAATGAGTTTCCACCTTTATTTTTGTTTGCATGTTAAAAAATCCAACAGTTCAGTAACCCATACTCATTGTTCAGGTGTTTGATGGCCATGGAGGAACCGATGCTGCTTTGTTTGTAAGAAATAACATCCTTAAACTCATTGTTGAGGACTCTCAGTTTCCAACTTGTGTGGGGAAGGCAATTACAAGTGCGTTTATGAAAGCTGATTATGCATTTGCAGATTCCAGTTCGCTTGATATCTCCTCTGGCACCACCGCTTTAACTGCACTTGTATTTGGGAGGTAATGACCTTGCATTATGATTCCATGATTCTTTTCATTAATTTTAGCAAGTTTTAGGTGCCTTCAGATTTTATTGGTTGTTTGTTAGATCCTATTATTTTTAAGTGGGTGTTAGAACACGGCCGCTCTGTCAATGTTTGGAAACAATATAATGGCATTTGCTTCTTCAACCGTAATTTATCCGGGAAAAACATAAGATTCTGGGATAGCATTTATGTCTCATCTCATTGGAGATGGAAGAGAGAAGCTGCGGAAAGAAAACTTATATGCATTGTGTTCTCTGTTGTTGCATGATTTCTTATGAGCTCTCTCCCTAAATTTGTGAAATTTCATCATTGACAGGAACATGGTAATTGCAAATGCGGGGGATTGTCGAGCTGTACTGGGAAGGCGAGGGAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGTATTTCAGAAAGACTAAGGATTGAAAAACTTGGTGGGGTGGTATATGATGGATACTTGAATGGCCAATTATCTGTTTCACGTGCCTTAGGTGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGTCCTTTGAGTGCCGAGCCAGAGTTGCAGGAAATCTTATTGACCGAGGATGATGAATTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGTAACCAAGGTGCTGTGACCATGGCAAGAAAGGAGTTGATGATACATAATGATCCTCAAAGGTGTTCGAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCATGTGATAATTTAACGGTTATTGTGGTATGTTTCTCCCCAGATCCTCCTTCCAGGATAGAGATACCTCCTACTCGAGTCAGGAGGAGTATATCAGCAGAAAGCCTTACTTTACTTAAGGGTGTATTAGAGTGTTAG
Protein sequence

>MS.gene064433.t1

MHVDMDYSPPITILEGDDYNKDNDNDNDDDKLGDFNNLKPTTIGKPPRHASSLRHSLSSNRLKLAASDLSVDAEVTGSKSSSENKTDFVPIFRSGSCAERGPKQYMEDEHVCIDDLTQHIGSTSNVPLPGAFYGVFDGHGGTDAALFVRNNILKLIVEDSQFPTCVGKAITSAFMKADYAFADSSSLDISSGTTALTALVFGRNMVIANAGDCRAVLGRRGRAIEMSKDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQGAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSPDPPSRIEIPPTRVRRSISAESLTLLKGVLEC