Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064764.t1 | XP_003603769.1 | 96.1 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.00E+00 | 1128.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064764.t1 | G7J592 | 96.1 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0e+00 | 1128.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050363 | MS.gene064764 | 0.872743 | 2.51E-67 | -1.69E-46 |
| MS.gene050381 | MS.gene064764 | 0.817467 | 3.25E-52 | -1.69E-46 |
| MS.gene051946 | MS.gene064764 | 0.803577 | 3.26E-49 | -1.69E-46 |
| MS.gene055401 | MS.gene064764 | 0.848718 | 5.13E-60 | -1.69E-46 |
| MS.gene056310 | MS.gene064764 | 0.813224 | 2.85E-51 | -1.69E-46 |
| MS.gene056313 | MS.gene064764 | 0.817176 | 3.78E-52 | -1.69E-46 |
| MS.gene056408 | MS.gene064764 | 0.821349 | 4.23E-53 | -1.69E-46 |
| MS.gene060808 | MS.gene064764 | 0.810857 | 9.36E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064764.t1 | MTR_3g114010 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1204 |
| MS.gene064764.t1 | MTR_1g025340 | 58.185 | 617 | 224 | 9 | 1 | 606 | 1 | 594 | 0.0 | 684 |
| MS.gene064764.t1 | MTR_1g096970 | 52.140 | 514 | 227 | 6 | 77 | 584 | 2 | 502 | 7.94e-174 | 504 |
| MS.gene064764.t1 | MTR_8g095080 | 43.797 | 532 | 267 | 7 | 39 | 560 | 69 | 578 | 2.41e-129 | 394 |
| MS.gene064764.t1 | MTR_3g097240 | 49.626 | 401 | 193 | 5 | 76 | 473 | 94 | 488 | 3.20e-123 | 377 |
| MS.gene064764.t1 | MTR_8g095080 | 49.389 | 409 | 195 | 3 | 39 | 441 | 69 | 471 | 2.47e-122 | 370 |
| MS.gene064764.t1 | MTR_3g097240 | 49.577 | 355 | 171 | 4 | 76 | 427 | 94 | 443 | 3.14e-105 | 325 |
| MS.gene064764.t1 | MTR_3g097240 | 48.936 | 329 | 160 | 4 | 76 | 401 | 94 | 417 | 1.66e-94 | 296 |
| MS.gene064764.t1 | MTR_0318s0020 | 24.424 | 434 | 247 | 7 | 120 | 483 | 126 | 548 | 2.06e-28 | 120 |
| MS.gene064764.t1 | MTR_1g044135 | 32.536 | 209 | 131 | 3 | 122 | 327 | 43 | 244 | 4.95e-19 | 91.3 |
| MS.gene064764.t1 | MTR_1g044135 | 31.646 | 158 | 93 | 3 | 340 | 493 | 437 | 583 | 1.97e-14 | 77.0 |
| MS.gene064764.t1 | MTR_1g073890 | 30.660 | 212 | 134 | 4 | 122 | 328 | 46 | 249 | 1.22e-16 | 84.0 |
| MS.gene064764.t1 | MTR_1g073890 | 33.526 | 173 | 98 | 5 | 325 | 493 | 394 | 553 | 3.34e-15 | 79.3 |
| MS.gene064764.t1 | MTR_1g061540 | 34.014 | 147 | 83 | 3 | 340 | 484 | 384 | 518 | 2.20e-16 | 82.8 |
| MS.gene064764.t1 | MTR_6g461910 | 36.364 | 165 | 87 | 6 | 326 | 483 | 337 | 490 | 3.35e-15 | 79.0 |
| MS.gene064764.t1 | MTR_6g461910 | 25.893 | 224 | 152 | 4 | 120 | 336 | 34 | 250 | 8.82e-13 | 71.2 |
| MS.gene064764.t1 | MTR_1g092540 | 32.237 | 152 | 89 | 3 | 341 | 488 | 433 | 574 | 6.39e-14 | 75.1 |
| MS.gene064764.t1 | MTR_1g092540 | 25.701 | 214 | 151 | 3 | 117 | 327 | 21 | 229 | 7.47e-14 | 75.1 |
| MS.gene064764.t1 | MTR_3g091180 | 32.237 | 152 | 86 | 3 | 340 | 484 | 423 | 564 | 1.08e-12 | 71.2 |
| MS.gene064764.t1 | MTR_3g091180 | 28.774 | 212 | 137 | 5 | 122 | 327 | 26 | 229 | 7.39e-11 | 65.5 |
| MS.gene064764.t1 | MTR_7g103490 | 31.544 | 149 | 86 | 2 | 343 | 485 | 396 | 534 | 1.93e-12 | 70.5 |
| MS.gene064764.t1 | MTR_7g103490 | 26.977 | 215 | 142 | 5 | 122 | 329 | 29 | 235 | 2.24e-12 | 70.1 |
| MS.gene064764.t1 | MTR_4g021260 | 25.234 | 214 | 154 | 2 | 122 | 329 | 19 | 232 | 2.74e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064764.t1 | AT1G30755 | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| MS.gene064764.t1 | AT1G30755 | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| MS.gene064764.t1 | AT1G30755 | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| MS.gene064764.t1 | AT1G34320 | 49.808 | 520 | 234 | 9 | 76 | 581 | 105 | 611 | 3.06e-161 | 476 |
| MS.gene064764.t1 | AT1G34320 | 49.808 | 520 | 234 | 9 | 76 | 581 | 105 | 611 | 3.06e-161 | 476 |
| MS.gene064764.t1 | AT1G30755 | 52.980 | 453 | 201 | 4 | 1 | 441 | 1 | 453 | 1.10e-155 | 455 |
| MS.gene064764.t1 | AT1G30755 | 51.708 | 439 | 200 | 4 | 1 | 427 | 1 | 439 | 4.44e-143 | 422 |
| MS.gene064764.t1 | AT1G30755 | 51.708 | 439 | 200 | 4 | 1 | 427 | 1 | 439 | 4.44e-143 | 422 |
| MS.gene064764.t1 | AT5G08660 | 46.154 | 494 | 236 | 10 | 76 | 560 | 103 | 575 | 2.27e-129 | 394 |
| MS.gene064764.t1 | AT5G08660 | 46.154 | 494 | 236 | 10 | 76 | 560 | 103 | 575 | 2.27e-129 | 394 |
| MS.gene064764.t1 | AT5G08660 | 46.154 | 494 | 236 | 10 | 76 | 560 | 103 | 575 | 2.27e-129 | 394 |
| MS.gene064764.t1 | AT5G08660 | 52.151 | 372 | 168 | 4 | 76 | 441 | 103 | 470 | 7.11e-113 | 346 |
| MS.gene064764.t1 | AT5G51670 | 24.941 | 421 | 251 | 8 | 122 | 483 | 37 | 451 | 3.05e-26 | 112 |
| MS.gene064764.t1 | AT5G51670 | 24.941 | 421 | 251 | 8 | 122 | 483 | 37 | 451 | 3.05e-26 | 112 |
| MS.gene064764.t1 | AT3G23160 | 29.439 | 214 | 138 | 4 | 122 | 330 | 43 | 248 | 5.40e-17 | 84.7 |
| MS.gene064764.t1 | AT3G23160 | 32.692 | 156 | 89 | 4 | 343 | 493 | 361 | 505 | 1.93e-14 | 76.6 |
| MS.gene064764.t1 | AT5G04550 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.05e-12 | 70.5 |
| MS.gene064764.t1 | AT5G04550 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 2.14e-12 | 70.5 |
| MS.gene064764.t1 | AT5G04550 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.05e-12 | 70.5 |
| MS.gene064764.t1 | AT5G04550 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 2.14e-12 | 70.5 |
Find 161 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAGGTTATACCTCTTTC+TGG | 0.206036 | 3.4:-97929711 | None:intergenic |
| CACTAGAAAGGGCTCTTTAT+TGG | 0.209748 | 3.4:+97926755 | MS.gene064764:CDS |
| TATAATGTGTCCCTCGTATT+TGG | 0.226029 | 3.4:-97929628 | None:intergenic |
| GCGAATTGGGTTGCTTTCTT+TGG | 0.239633 | 3.4:-97930309 | None:intergenic |
| ACTTGGAGGGATGAACAATT+TGG | 0.261598 | 3.4:+97925375 | MS.gene064764:CDS |
| CTGTTTGTTCGGCGGGGATG+GGG | 0.262647 | 3.4:+97925335 | MS.gene064764:CDS |
| AGCTGTTTGTTCGGCGGGGA+TGG | 0.294101 | 3.4:+97925333 | MS.gene064764:CDS |
| GCTGTTTGTTCGGCGGGGAT+GGG | 0.295470 | 3.4:+97925334 | MS.gene064764:CDS |
| TGTTTACATTATTGAATTGT+TGG | 0.296282 | 3.4:+97930370 | MS.gene064764:CDS |
| CTTGGAGGGATGAACAATTT+GGG | 0.298151 | 3.4:+97925376 | MS.gene064764:CDS |
| ATATACCTCCTCTAAATATC+TGG | 0.305237 | 3.4:-97928348 | None:intergenic |
| TTCACCTGATAAGGAGTTCT+TGG | 0.308165 | 3.4:+97930697 | MS.gene064764:CDS |
| AAGCAAAACAAGCTAGAAAA+TGG | 0.311419 | 3.4:+97925481 | MS.gene064764:CDS |
| ATGAACAATTTGGGGTTCTC+TGG | 0.312989 | 3.4:+97925385 | MS.gene064764:CDS |
| AGAAAGTGAGTGAAATAAAA+TGG | 0.316068 | 3.4:-97926934 | None:intergenic |
| TATTGGGTAAAGCTAGCTAT+AGG | 0.317617 | 3.4:+97926772 | MS.gene064764:CDS |
| TTTGGTCTTGAGAGGGTGCC+TGG | 0.318517 | 3.4:-97930663 | None:intergenic |
| CTATCCACTTCCGCTTCAAT+TGG | 0.319467 | 3.4:+97925523 | MS.gene064764:CDS |
| TCACGGGAAGTAGTTAGATT+TGG | 0.323364 | 3.4:+97927175 | MS.gene064764:CDS |
| AACATCTATCTTCTGCTTAT+CGG | 0.328434 | 3.4:-97930351 | None:intergenic |
| CCACCACAACTATAACGTTT+TGG | 0.340346 | 3.4:+97930739 | MS.gene064764:CDS |
| TCTTTGGTCCAGATATTTAG+AGG | 0.343093 | 3.4:+97928340 | MS.gene064764:CDS |
| ACTAGAAAGGGCTCTTTATT+GGG | 0.349692 | 3.4:+97926756 | MS.gene064764:CDS |
| GTGAAATAAAATGGCTCCTT+TGG | 0.349733 | 3.4:-97926925 | None:intergenic |
| AGGGAAGAAAATATCAATAT+TGG | 0.349870 | 3.4:+97926878 | MS.gene064764:CDS |
| GTTCATAAGCACTTAATTCA+TGG | 0.354686 | 3.4:-97927795 | None:intergenic |
| TAAAGTGTCTGGAGGCGAAT+TGG | 0.362664 | 3.4:-97930323 | None:intergenic |
| AGGTGAACTCCCAGCACTTT+TGG | 0.367675 | 3.4:-97930681 | None:intergenic |
| CAGATTAGACTTGGATGTCT+TGG | 0.372829 | 3.4:+97927379 | MS.gene064764:intron |
| TCTAATAATATCCTATCTTC+TGG | 0.378873 | 3.4:-97930566 | None:intergenic |
| GTACCCAAGAACTCCTTATC+AGG | 0.382837 | 3.4:-97930701 | None:intergenic |
| GTATTTGGAGGAAGGGAGGC+TGG | 0.382938 | 3.4:-97929613 | None:intergenic |
| CCAGCTTCACCTAGTCTTTG+AGG | 0.388523 | 3.4:-97929450 | None:intergenic |
| CGCATCTTAGACTGAAGTTC+AGG | 0.389412 | 3.4:-97930485 | None:intergenic |
| AACAGGGCTCATCAAGGCTT+TGG | 0.390105 | 3.4:+97930102 | MS.gene064764:intron |
| TACCTCTTTCTGGATAGAAA+TGG | 0.393069 | 3.4:-97929701 | None:intergenic |
| ACAATTAGTCTCAACAGATA+TGG | 0.394875 | 3.4:+97927010 | MS.gene064764:CDS |
| CCACCACTGGTGTTTAACTT+TGG | 0.408588 | 3.4:-97926831 | None:intergenic |
| CTTTGGATGGGTTGGTGAAT+GGG | 0.411171 | 3.4:+97930119 | MS.gene064764:CDS |
| GCTTTGGATGGGTTGGTGAA+TGG | 0.411360 | 3.4:+97930118 | MS.gene064764:CDS |
| CGTGAGTTCCTTGGAAATCA+TGG | 0.412240 | 3.4:+97928615 | MS.gene064764:CDS |
| ATTGGGTAAAGCTAGCTATA+GGG | 0.415408 | 3.4:+97926773 | MS.gene064764:CDS |
| ACGAATTGCTTGATGTATAT+AGG | 0.416690 | 3.4:-97928595 | None:intergenic |
| TGCTGGGAGTTCACCTGATA+AGG | 0.417744 | 3.4:+97930688 | MS.gene064764:CDS |
| ATGGGAGCTGTTTGTTCGGC+GGG | 0.424396 | 3.4:+97925328 | MS.gene064764:CDS |
| AGGGCACTCTTAATACTGTT+TGG | 0.425261 | 3.4:-97929661 | None:intergenic |
| TTGGATATTATGGATGGCTT+AGG | 0.426323 | 3.4:+97930758 | MS.gene064764:CDS |
| CAAGCAATTCGTGAGTTCCT+TGG | 0.428629 | 3.4:+97928606 | MS.gene064764:CDS |
| ACCAGTGGTGGGTTTGTCTC+TGG | 0.431852 | 3.4:+97926843 | MS.gene064764:CDS |
| TATCCACTTCCGCTTCAATT+GGG | 0.432097 | 3.4:+97925524 | MS.gene064764:CDS |
| CTCTGGGAAGGTTCTTAAGA+AGG | 0.438542 | 3.4:+97925402 | MS.gene064764:CDS |
| AGACTGAAGTTCAGGTCTCT+TGG | 0.440141 | 3.4:-97930477 | None:intergenic |
| AATTTCAAGGAGGAGGAGCC+CGG | 0.440803 | 3.4:+97930595 | MS.gene064764:CDS |
| TTGATTGTATTTGCCGCAAA+TGG | 0.442663 | 3.4:-97929928 | None:intergenic |
| AGAAGATAGGATATTATTAG+AGG | 0.443661 | 3.4:+97930568 | MS.gene064764:CDS |
| AGATTAGACTTGGATGTCTT+GGG | 0.448582 | 3.4:+97927380 | MS.gene064764:intron |
| CATCAAGGCTTTGGATGGGT+TGG | 0.449569 | 3.4:+97930111 | MS.gene064764:CDS |
| AAAGTGTCTGGAGGCGAATT+GGG | 0.454666 | 3.4:-97930322 | None:intergenic |
| GAGAGCAATGCAGAAGAACT+TGG | 0.459267 | 3.4:+97925358 | MS.gene064764:CDS |
| GACCGTGTGGGCATTGCCAT+TGG | 0.460170 | 3.4:-97930446 | None:intergenic |
| TATTAGAGGAGGTAATTTCA+AGG | 0.460679 | 3.4:+97930582 | MS.gene064764:CDS |
| TGAACAATTTGGGGTTCTCT+GGG | 0.462361 | 3.4:+97925386 | MS.gene064764:CDS |
| TGTTTGTTCGGCGGGGATGG+GGG | 0.464288 | 3.4:+97925336 | MS.gene064764:CDS |
| ACATTATTGAATTGTTGGTA+TGG | 0.467171 | 3.4:+97930375 | MS.gene064764:CDS |
| CTCAACTTTCTCCAGAAGAT+AGG | 0.474373 | 3.4:+97930555 | MS.gene064764:CDS |
| TCACCTGATAAGGAGTTCTT+GGG | 0.476603 | 3.4:+97930698 | MS.gene064764:CDS |
| CTTATCATAGGTCACTAGAA+AGG | 0.481697 | 3.4:+97926743 | MS.gene064764:intron |
| GGGCTCATCAAGGCTTTGGA+TGG | 0.482723 | 3.4:+97930106 | MS.gene064764:intron |
| TTCCCCAATTGAAGCGGAAG+TGG | 0.483971 | 3.4:-97925527 | None:intergenic |
| GACAGAAACAACAAGCCATT+GGG | 0.486617 | 3.4:+97930530 | MS.gene064764:CDS |
| CCTCTCAAGACCAAAAGTGC+TGG | 0.487668 | 3.4:+97930671 | MS.gene064764:CDS |
| CTCTCAAGACCAAAAGTGCT+GGG | 0.492885 | 3.4:+97930672 | MS.gene064764:CDS |
| TATCGGCGTAGTAAAGTGTC+TGG | 0.492972 | 3.4:-97930334 | None:intergenic |
| ACCTTTCAGAGGAAGATTCA+AGG | 0.494840 | 3.4:-97927860 | None:intergenic |
| CAATTTGGGGTTCTCTGGGA+AGG | 0.497243 | 3.4:+97925390 | MS.gene064764:CDS |
| TGACATTGCAGTAACGACTT+TGG | 0.497519 | 3.4:+97930275 | MS.gene064764:intron |
| TTATCATAGGTCACTAGAAA+GGG | 0.499151 | 3.4:+97926744 | MS.gene064764:intron |
| AACGTTATAGTTGTGGTGGT+TGG | 0.507765 | 3.4:-97930735 | None:intergenic |
| GTTCTTGATACACTTGGAAG+TGG | 0.508568 | 3.4:+97926804 | MS.gene064764:CDS |
| AGGAGGTAATTTCAAGGAGG+AGG | 0.509239 | 3.4:+97930588 | MS.gene064764:CDS |
| GATGTAGGTTGTGCCATTGT+GGG | 0.511411 | 3.4:-97927213 | None:intergenic |
| CGATGTAGGTTGTGCCATTG+TGG | 0.512886 | 3.4:-97927214 | None:intergenic |
| ATCCATTTCTATCCAGAAAG+AGG | 0.516436 | 3.4:+97929699 | MS.gene064764:CDS |
| AGACAGAAACAACAAGCCAT+TGG | 0.517679 | 3.4:+97930529 | MS.gene064764:CDS |
| CCTCAAAGACTAGGTGAAGC+TGG | 0.518624 | 3.4:+97929450 | MS.gene064764:CDS |
| ACGAGGGACACATTATATCA+AGG | 0.522467 | 3.4:+97929634 | MS.gene064764:CDS |
| AAGAATTAAATGTATTCTCA+CGG | 0.524963 | 3.4:+97927158 | MS.gene064764:CDS |
| ATGAAATATCAGATTAGACT+TGG | 0.530537 | 3.4:+97927370 | MS.gene064764:intron |
| GGCTCATCAAGGCTTTGGAT+GGG | 0.531203 | 3.4:+97930107 | MS.gene064764:CDS |
| CATTCAGTTCCTCAAGAAGG+AGG | 0.532398 | 3.4:+97926965 | MS.gene064764:CDS |
| AATTTAAAACCTCCTTCTTG+AGG | 0.532695 | 3.4:-97926974 | None:intergenic |
| GTGGAAGTTCTTGATACACT+TGG | 0.535597 | 3.4:+97926798 | MS.gene064764:CDS |
| TTCCGCTTTGATATGAGTGA+AGG | 0.542865 | 3.4:-97929878 | None:intergenic |
| ATCCACTTCCGCTTCAATTG+GGG | 0.545527 | 3.4:+97925525 | MS.gene064764:CDS |
| TCCTTGAATCTTCCTCTGAA+AGG | 0.546389 | 3.4:+97927859 | MS.gene064764:CDS |
| GGTGCTGTCAAGTATACTAA+AGG | 0.548639 | 3.4:+97929426 | MS.gene064764:CDS |
| TATTTGGAGGAAGGGAGGCT+GGG | 0.551779 | 3.4:-97929612 | None:intergenic |
| CTGCCAAGAAAACTCATGCC+AGG | 0.553142 | 3.4:+97930645 | MS.gene064764:CDS |
| CCAAAGTTAAACACCAGTGG+TGG | 0.555780 | 3.4:+97926831 | MS.gene064764:CDS |
| GCCAGAGACAAACCCACCAC+TGG | 0.556299 | 3.4:-97926844 | None:intergenic |
| AGAATTAAATGTATTCTCAC+GGG | 0.556492 | 3.4:+97927159 | MS.gene064764:CDS |
| TATCCAAAACGTTATAGTTG+TGG | 0.558251 | 3.4:-97930742 | None:intergenic |
| TCAGTGGCTCGTACCATTTG+CGG | 0.558291 | 3.4:+97929915 | MS.gene064764:CDS |
| GTCTCTGGCAAGCTTTCCAG+AGG | 0.561603 | 3.4:+97926858 | MS.gene064764:CDS |
| AAACATTCAGTTCCTCAAGA+AGG | 0.562368 | 3.4:+97926962 | MS.gene064764:CDS |
| ATCTTACAGAGCTAATCAAA+TGG | 0.562545 | 3.4:-97930403 | None:intergenic |
| TTGGAGGGATGAACAATTTG+GGG | 0.565256 | 3.4:+97925377 | MS.gene064764:CDS |
| TGGATTGCAACCGAGATGGA+AGG | 0.565419 | 3.4:-97929681 | None:intergenic |
| GAAATGGATTGCAACCGAGA+TGG | 0.566963 | 3.4:-97929685 | None:intergenic |
| TGTCCCTCGTATTTGGAGGA+AGG | 0.567652 | 3.4:-97929621 | None:intergenic |
| AATGTGTCCCTCGTATTTGG+AGG | 0.568090 | 3.4:-97929625 | None:intergenic |
| AGATGCCGAAAAGACAATGC+AGG | 0.570619 | 3.4:+97927421 | MS.gene064764:CDS |
| ATTAGCAAAAGTGAGGAACT+TGG | 0.571334 | 3.4:+97930620 | MS.gene064764:CDS |
| GTCCCTCGTATTTGGAGGAA+GGG | 0.574579 | 3.4:-97929620 | None:intergenic |
| ACAAAATGCCTCGAGGCCAA+TGG | 0.577458 | 3.4:+97930430 | MS.gene064764:CDS |
| ATTTCAAGGAGGAGGAGCCC+GGG | 0.577633 | 3.4:+97930596 | MS.gene064764:CDS |
| TGAAGTTCAGGTCTCTTGGA+AGG | 0.578768 | 3.4:-97930473 | None:intergenic |
| CCAAAACGTTATAGTTGTGG+TGG | 0.583947 | 3.4:-97930739 | None:intergenic |
| TTAAGAGTGCCCTTCCATCT+CGG | 0.586379 | 3.4:+97929671 | MS.gene064764:CDS |
| GGCCAATGGCAATGCCCACA+CGG | 0.587290 | 3.4:+97930444 | MS.gene064764:CDS |
| TTCTTGATACACTTGGAAGT+GGG | 0.588407 | 3.4:+97926805 | MS.gene064764:CDS |
| AATGGGAGCTGTTTGTTCGG+CGG | 0.589590 | 3.4:+97925327 | None:intergenic |
| ATTGTTAACAGGGCTCATCA+AGG | 0.593222 | 3.4:+97930096 | MS.gene064764:intron |
| AGATAGGATATTATTAGAGG+AGG | 0.593450 | 3.4:+97930571 | MS.gene064764:CDS |
| TAAAGCTAGCTATAGGGCGG+TGG | 0.594166 | 3.4:+97926779 | MS.gene064764:CDS |
| TGTTCATACCATGATTTCCA+AGG | 0.595508 | 3.4:-97928623 | None:intergenic |
| GGATTGCAACCGAGATGGAA+GGG | 0.595874 | 3.4:-97929680 | None:intergenic |
| TAGAGGAGGTAATTTCAAGG+AGG | 0.599131 | 3.4:+97930585 | MS.gene064764:CDS |
| ATATATCTGATTGATCATGT+TGG | 0.602694 | 3.4:-97929490 | None:intergenic |
| TCTAAGTTCTAACCTTTCAG+AGG | 0.602716 | 3.4:-97927871 | None:intergenic |
| GGAGAAAGTTGAGTTCCCAA+TGG | 0.606564 | 3.4:-97930545 | None:intergenic |
| ACTAAAGGTCCTCAAAGACT+AGG | 0.608726 | 3.4:+97929441 | MS.gene064764:CDS |
| AGTGGATAGACCGAATTCAT+CGG | 0.617545 | 3.4:-97925509 | None:intergenic |
| GCAATGCAGAAGAACTTGGA+GGG | 0.623845 | 3.4:+97925362 | MS.gene064764:CDS |
| CAAAGTTAAACACCAGTGGT+GGG | 0.625267 | 3.4:+97926832 | MS.gene064764:CDS |
| CCTCCCTTCCTCCAAATACG+AGG | 0.628725 | 3.4:+97929617 | MS.gene064764:CDS |
| ACCTTGAGAAATGTCGATGT+AGG | 0.628997 | 3.4:-97927228 | None:intergenic |
| GGGCATTGCCATTGGCCTCG+AGG | 0.630544 | 3.4:-97930438 | None:intergenic |
| ACCTACATCGACATTTCTCA+AGG | 0.631682 | 3.4:+97927227 | MS.gene064764:CDS |
| TTGGTGAATGGGCAAACACA+AGG | 0.636366 | 3.4:+97930130 | MS.gene064764:CDS |
| CCTCGTATTTGGAGGAAGGG+AGG | 0.639013 | 3.4:-97929617 | None:intergenic |
| GTAGCTAATACAATAACCAA+AGG | 0.639145 | 3.4:+97926909 | MS.gene064764:CDS |
| CTCCCTTCCTCCAAATACGA+GGG | 0.644751 | 3.4:+97929618 | MS.gene064764:CDS |
| TTGGTCCAGATATTTAGAGG+AGG | 0.646740 | 3.4:+97928343 | MS.gene064764:CDS |
| AGTTCAGGTCTCTTGGAAGG+AGG | 0.660563 | 3.4:-97930470 | None:intergenic |
| AGCAATGCAGAAGAACTTGG+AGG | 0.662834 | 3.4:+97925361 | MS.gene064764:CDS |
| CTCCTTCACTCATATCAAAG+CGG | 0.662984 | 3.4:+97929876 | MS.gene064764:CDS |
| CCCGGGAATTAGCAAAAGTG+AGG | 0.666356 | 3.4:+97930613 | MS.gene064764:CDS |
| CTTGGAAGGAGGAGACCGTG+TGG | 0.669539 | 3.4:-97930459 | None:intergenic |
| TTGGAAGGAGGAGACCGTGT+GGG | 0.672365 | 3.4:-97930458 | None:intergenic |
| CGGCGTAGTAAAGTGTCTGG+AGG | 0.672625 | 3.4:-97930331 | None:intergenic |
| TCTCTGGCAAGCTTTCCAGA+GGG | 0.673396 | 3.4:+97926859 | MS.gene064764:CDS |
| TGGGAGCTGTTTGTTCGGCG+GGG | 0.678824 | 3.4:+97925329 | MS.gene064764:CDS |
| ATGCCAAAGTTAAACACCAG+TGG | 0.681956 | 3.4:+97926828 | MS.gene064764:CDS |
| GTGGTGGTTGGCGATGAGTG+TGG | 0.685493 | 3.4:-97930723 | None:intergenic |
| CTGAACTTCAGTCTAAGATG+CGG | 0.686840 | 3.4:+97930486 | MS.gene064764:CDS |
| AAATGAATAAGACTCTTCAG+TGG | 0.700574 | 3.4:+97929899 | MS.gene064764:CDS |
| GGGTAAAGCTAGCTATAGGG+CGG | 0.706000 | 3.4:+97926776 | MS.gene064764:CDS |
| ATATGTGTAAAGACCCACAA+TGG | 0.711309 | 3.4:+97927200 | MS.gene064764:CDS |
| TAGTCTAGTTCATCATACTG+CGG | 0.726979 | 3.4:+97927451 | MS.gene064764:CDS |
| GATCCAGACAAAATGCCTCG+AGG | 0.746283 | 3.4:+97930423 | MS.gene064764:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACAATCTATATAAATT+AGG | - | chr3.4:97926508-97926527 | None:intergenic | 10.0% |
| !! | ATATATAATATAAAAGATCT+AGG | - | chr3.4:97927600-97927619 | None:intergenic | 10.0% |
| !! | TAAACAATCTATATAAATTA+GGG | - | chr3.4:97926507-97926526 | None:intergenic | 10.0% |
| !! | TTTATTAATTAATTATGAGT+TGG | - | chr3.4:97927315-97927334 | None:intergenic | 10.0% |
| !!! | AATATATTTTTGACAAAAAA+AGG | - | chr3.4:97928109-97928128 | None:intergenic | 10.0% |
| !!! | AATTTAAAATAAAAATTAGC+AGG | - | chr3.4:97929091-97929110 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAAAAATTAGCA+GGG | - | chr3.4:97929090-97929109 | None:intergenic | 10.0% |
| !!! | TTATCTTTTTGAAATTTTTA+GGG | + | chr3.4:97927135-97927154 | MS.gene064764:intron | 10.0% |
| !! | TGATTATCAACAAAAAATTA+AGG | + | chr3.4:97927828-97927847 | MS.gene064764:CDS | 15.0% |
| !! | TTATTTAAATGAATACTTCT+TGG | + | chr3.4:97927948-97927967 | MS.gene064764:intron | 15.0% |
| !!! | ATGTATATTGTAAATTTTTC+TGG | + | chr3.4:97929034-97929053 | MS.gene064764:intron | 15.0% |
| !!! | CTTATCTTTTTGAAATTTTT+AGG | + | chr3.4:97927134-97927153 | MS.gene064764:intron | 15.0% |
| !! | AAAATGAGCATAAAAAAGAT+TGG | - | chr3.4:97928870-97928889 | None:intergenic | 20.0% |
| !! | AAATTCATAGCAAAAACAAA+AGG | - | chr3.4:97927096-97927115 | None:intergenic | 20.0% |
| !! | AAGAATTAAATGTATTCTCA+CGG | + | chr3.4:97927158-97927177 | MS.gene064764:CDS | 20.0% |
| !! | AAGATAAACTCCTAAAATTA+TGG | + | chr3.4:97925988-97926007 | MS.gene064764:intron | 20.0% |
| !! | AATAAATTTCAATCTTCAAG+AGG | - | chr3.4:97929813-97929832 | None:intergenic | 20.0% |
| !! | AATCTATATAAATTAGGGAA+GGG | - | chr3.4:97926502-97926521 | None:intergenic | 20.0% |
| !! | ACGAAAACATTTATTTGATT+AGG | - | chr3.4:97929557-97929576 | None:intergenic | 20.0% |
| !! | AGAAACTAAAAAAATGACAA+TGG | - | chr3.4:97927550-97927569 | None:intergenic | 20.0% |
| !! | AGTGATACTAATAGTAAAAA+GGG | - | chr3.4:97926280-97926299 | None:intergenic | 20.0% |
| !! | CACAAAACAAAAAATGATTA+AGG | - | chr3.4:97929253-97929272 | None:intergenic | 20.0% |
| !! | TATAAAAGATCTAGGAATTA+AGG | - | chr3.4:97927592-97927611 | None:intergenic | 20.0% |
| !! | TCAACAAAAAATTAAGGAAA+TGG | + | chr3.4:97927834-97927853 | MS.gene064764:CDS | 20.0% |
| !! | TGTTTACATTATTGAATTGT+TGG | + | chr3.4:97930370-97930389 | MS.gene064764:CDS | 20.0% |
| !! | TTGAAAACCAAATTCTTATT+GGG | - | chr3.4:97928057-97928076 | None:intergenic | 20.0% |
| !! | TTGAATTATGCTAAATGTAA+TGG | + | chr3.4:97929838-97929857 | MS.gene064764:intron | 20.0% |
| !! | TTTCAAAAAGATAAGTGATA+AGG | - | chr3.4:97927129-97927148 | None:intergenic | 20.0% |
| !! | TTTGAAAACCAAATTCTTAT+TGG | - | chr3.4:97928058-97928077 | None:intergenic | 20.0% |
| !!! | AAAAATATTTAAAACCTGAC+AGG | - | chr3.4:97929991-97930010 | None:intergenic | 20.0% |
| !!! | AGGAGGTATATTATTAATAA+AGG | + | chr3.4:97928360-97928379 | MS.gene064764:intron | 20.0% |
| !!! | CTAATCTGATATTTCATTTT+CGG | - | chr3.4:97927367-97927386 | None:intergenic | 20.0% |
| !!! | CTATTTTATCTTAACATTTG+AGG | + | chr3.4:97928007-97928026 | MS.gene064764:intron | 20.0% |
| !!! | TAATTTTCTCGTTTTAATGT+AGG | + | chr3.4:97927765-97927784 | MS.gene064764:intron | 20.0% |
| !!! | TCTAGTCCTTTTTAATTTTT+TGG | + | chr3.4:97929763-97929782 | MS.gene064764:intron | 20.0% |
| !!! | TCTTTTATAGTTAAGACTTA+AGG | + | chr3.4:97925640-97925659 | MS.gene064764:intron | 20.0% |
| !!! | TTCTGAGGATTTAAATTTTT+AGG | - | chr3.4:97928203-97928222 | None:intergenic | 20.0% |
| !!! | TTTTCTTCAATAAAAAGAGA+AGG | - | chr3.4:97928782-97928801 | None:intergenic | 20.0% |
| ! | AAGAATCATGACATATAGAT+AGG | - | chr3.4:97928816-97928835 | None:intergenic | 25.0% |
| ! | AATAAAAAGAGAAGGAATGT+GGG | - | chr3.4:97928774-97928793 | None:intergenic | 25.0% |
| ! | AATACCAAGATTTGACAAAA+AGG | - | chr3.4:97927925-97927944 | None:intergenic | 25.0% |
| ! | ACATTATTGAATTGTTGGTA+TGG | + | chr3.4:97930375-97930394 | MS.gene064764:CDS | 25.0% |
| ! | ACTTGAAAAAGAAATCTCTT+TGG | + | chr3.4:97928324-97928343 | MS.gene064764:CDS | 25.0% |
| ! | AGAAAGTGAGTGAAATAAAA+TGG | - | chr3.4:97926937-97926956 | None:intergenic | 25.0% |
| ! | AGAAGATAGGATATTATTAG+AGG | + | chr3.4:97930568-97930587 | MS.gene064764:CDS | 25.0% |
| ! | AGAAGTTATCTAATGATTGA+CGG | + | chr3.4:97928219-97928238 | MS.gene064764:intron | 25.0% |
| ! | AGAATTAAATGTATTCTCAC+GGG | + | chr3.4:97927159-97927178 | MS.gene064764:CDS | 25.0% |
| ! | AGGGAAGAAAATATCAATAT+TGG | + | chr3.4:97926878-97926897 | MS.gene064764:CDS | 25.0% |
| ! | ATACATAGCGTTTATTTACA+AGG | - | chr3.4:97929020-97929039 | None:intergenic | 25.0% |
| ! | ATACCAAGATTTGACAAAAA+GGG | - | chr3.4:97927924-97927943 | None:intergenic | 25.0% |
| ! | ATATATCTGATTGATCATGT+TGG | - | chr3.4:97929493-97929512 | None:intergenic | 25.0% |
| ! | ATCTATATAAATTAGGGAAG+GGG | - | chr3.4:97926501-97926520 | None:intergenic | 25.0% |
| ! | ATGAAATATCAGATTAGACT+TGG | + | chr3.4:97927370-97927389 | MS.gene064764:intron | 25.0% |
| ! | CAATCTATATAAATTAGGGA+AGG | - | chr3.4:97926503-97926522 | None:intergenic | 25.0% |
| ! | CTAAATCGTTATGAAATTGT+GGG | + | chr3.4:97929388-97929407 | MS.gene064764:intron | 25.0% |
| ! | GAGTGATACTAATAGTAAAA+AGG | - | chr3.4:97926281-97926300 | None:intergenic | 25.0% |
| ! | GTCAAAAATATATTCTTTCC+TGG | + | chr3.4:97928115-97928134 | MS.gene064764:intron | 25.0% |
| ! | GTTATTTGTTCACATTATAC+AGG | - | chr3.4:97930203-97930222 | None:intergenic | 25.0% |
| ! | TAACTCATAACAACATCTAA+TGG | + | chr3.4:97929357-97929376 | MS.gene064764:intron | 25.0% |
| ! | TAATATCCAAAACTTCATTC+AGG | - | chr3.4:97928441-97928460 | None:intergenic | 25.0% |
| ! | TAATGTGAACAAATAACAAG+TGG | + | chr3.4:97930206-97930225 | MS.gene064764:intron | 25.0% |
| ! | TACATAGCGTTTATTTACAA+GGG | - | chr3.4:97929019-97929038 | None:intergenic | 25.0% |
| ! | TACCCACCAAAAAATTAAAA+AGG | - | chr3.4:97929772-97929791 | None:intergenic | 25.0% |
| ! | TAGTTATCCCAATAAGAATT+TGG | + | chr3.4:97928047-97928066 | MS.gene064764:intron | 25.0% |
| ! | TATAAACATGAATCTCTCTT+GGG | + | chr3.4:97930158-97930177 | MS.gene064764:intron | 25.0% |
| ! | TCTAAATCGTTATGAAATTG+TGG | + | chr3.4:97929387-97929406 | MS.gene064764:intron | 25.0% |
| ! | TCTAATAATATCCTATCTTC+TGG | - | chr3.4:97930569-97930588 | None:intergenic | 25.0% |
| ! | TTATAAACATGAATCTCTCT+TGG | + | chr3.4:97930157-97930176 | MS.gene064764:intron | 25.0% |
| ! | TTATCTTACTTAACCCATTT+GGG | - | chr3.4:97925975-97925994 | None:intergenic | 25.0% |
| ! | TTATTGCGCTAACAAAATTT+GGG | + | chr3.4:97929528-97929547 | MS.gene064764:intron | 25.0% |
| ! | TTCATCTGAAAATATTTCTC+AGG | - | chr3.4:97928144-97928163 | None:intergenic | 25.0% |
| ! | TTTATCTTACTTAACCCATT+TGG | - | chr3.4:97925976-97925995 | None:intergenic | 25.0% |
| ! | TTTATTGCGCTAACAAAATT+TGG | + | chr3.4:97929527-97929546 | MS.gene064764:intron | 25.0% |
| !! | AGGAAAACAGTTTTACAAAT+CGG | + | chr3.4:97925422-97925441 | MS.gene064764:CDS | 25.0% |
| !! | TGCATAATCTTTTATCTCAT+TGG | + | chr3.4:97927503-97927522 | MS.gene064764:intron | 25.0% |
| !! | TTCTTTGCTTGTTAAAGTTA+GGG | + | chr3.4:97927702-97927721 | MS.gene064764:intron | 25.0% |
| !! | TTTTATCTTAACATTTGAGG+TGG | + | chr3.4:97928010-97928029 | MS.gene064764:intron | 25.0% |
| !!! | AAGATGATTTTTCAGATTCA+AGG | + | chr3.4:97925446-97925465 | MS.gene064764:CDS | 25.0% |
| !!! | AGTAAAAAAGTACTGAAGTT+AGG | - | chr3.4:97926630-97926649 | None:intergenic | 25.0% |
| !!! | AGTCCTTTTTAATTTTTTGG+TGG | + | chr3.4:97929766-97929785 | MS.gene064764:intron | 25.0% |
| !!! | CTATAACGTTTTGGATATTA+TGG | + | chr3.4:97930748-97930767 | MS.gene064764:CDS | 25.0% |
| !!! | GTCCTTTTTAATTTTTTGGT+GGG | + | chr3.4:97929767-97929786 | MS.gene064764:intron | 25.0% |
| !!! | TCAAACTTTTTTTGAGAACT+CGG | + | chr3.4:97925784-97925803 | MS.gene064764:intron | 25.0% |
| !!! | TTAATTTTTTGGTGGGTATT+GGG | + | chr3.4:97929774-97929793 | MS.gene064764:intron | 25.0% |
| !!! | TTCTGCTAAATCATTTTTTC+TGG | + | chr3.4:97929170-97929189 | MS.gene064764:intron | 25.0% |
| !!! | TTGAACATGGTTTTAAATTG+CGG | - | chr3.4:97925741-97925760 | None:intergenic | 25.0% |
| !!! | TTTAACATATTTTGAGGTCT+CGG | - | chr3.4:97925705-97925724 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTTGGTGGGTAT+TGG | + | chr3.4:97929773-97929792 | MS.gene064764:intron | 25.0% |
| AAAGGAATTACTCCTATCAA+TGG | - | chr3.4:97928091-97928110 | None:intergenic | 30.0% | |
| AAATGAATAAGACTCTTCAG+TGG | + | chr3.4:97929899-97929918 | MS.gene064764:CDS | 30.0% | |
| AAATTATGGAATTCCGGAAA+TGG | + | chr3.4:97926002-97926021 | MS.gene064764:intron | 30.0% | |
| AACATCTATCTTCTGCTTAT+CGG | - | chr3.4:97930354-97930373 | None:intergenic | 30.0% | |
| AAGCAAAACAAGCTAGAAAA+TGG | + | chr3.4:97925481-97925500 | MS.gene064764:CDS | 30.0% | |
| AAGGAATTACTCCTATCAAT+GGG | - | chr3.4:97928090-97928109 | None:intergenic | 30.0% | |
| AATTTGAACTTTGTCTCTTG+GGG | - | chr3.4:97926084-97926103 | None:intergenic | 30.0% | |
| ACGAATTGCTTGATGTATAT+AGG | - | chr3.4:97928598-97928617 | None:intergenic | 30.0% | |
| ACGTTGCTTATTTATGACAA+CGG | + | chr3.4:97927263-97927282 | MS.gene064764:intron | 30.0% | |
| ACTAGAAATTGCAAGACAAA+TGG | - | chr3.4:97929749-97929768 | None:intergenic | 30.0% | |
| ACTTGTCGATATTGTTAACA+GGG | + | chr3.4:97930086-97930105 | MS.gene064764:intron | 30.0% | |
| AGATAGGATATTATTAGAGG+AGG | + | chr3.4:97930571-97930590 | MS.gene064764:CDS | 30.0% | |
| ATAAGTGATAAGGAACACAA+AGG | - | chr3.4:97927119-97927138 | None:intergenic | 30.0% | |
| ATAGTTAAGACTTAAGGACA+TGG | + | chr3.4:97925646-97925665 | MS.gene064764:intron | 30.0% | |
| ATATACCTCCTCTAAATATC+TGG | - | chr3.4:97928351-97928370 | None:intergenic | 30.0% | |
| ATCTTACAGAGCTAATCAAA+TGG | - | chr3.4:97930406-97930425 | None:intergenic | 30.0% | |
| CAATAAAAAGAGAAGGAATG+TGG | - | chr3.4:97928775-97928794 | None:intergenic | 30.0% | |
| CAATCATTAGATAACTTCTG+AGG | - | chr3.4:97928218-97928237 | None:intergenic | 30.0% | |
| CATAAGTGTAATATGACAGA+AGG | + | chr3.4:97926315-97926334 | MS.gene064764:intron | 30.0% | |
| CTCCTAAAATTATGGAATTC+CGG | + | chr3.4:97925996-97926015 | MS.gene064764:intron | 30.0% | |
| GAAAAACATATGAATACACC+TGG | - | chr3.4:97927644-97927663 | None:intergenic | 30.0% | |
| GAAAACTGTGAGATCATTAA+GGG | + | chr3.4:97929223-97929242 | MS.gene064764:intron | 30.0% | |
| GAAATTTAGTGTCTCATGAT+TGG | + | chr3.4:97926712-97926731 | MS.gene064764:intron | 30.0% | |
| GAATTTGAACTTTGTCTCTT+GGG | - | chr3.4:97926085-97926104 | None:intergenic | 30.0% | |
| GTAGCTAATACAATAACCAA+AGG | + | chr3.4:97926909-97926928 | MS.gene064764:CDS | 30.0% | |
| GTATCACTTAAAAACATAGC+TGG | + | chr3.4:97926134-97926153 | MS.gene064764:intron | 30.0% | |
| GTTCATAAGCACTTAATTCA+TGG | - | chr3.4:97927798-97927817 | None:intergenic | 30.0% | |
| TAATCACATTATTAGAGCCA+TGG | - | chr3.4:97929138-97929157 | None:intergenic | 30.0% | |
| TACCAAGATTTGACAAAAAG+GGG | - | chr3.4:97927923-97927942 | None:intergenic | 30.0% | |
| TACTTGTCGATATTGTTAAC+AGG | + | chr3.4:97930085-97930104 | MS.gene064764:intron | 30.0% | |
| TATCCAAAACGTTATAGTTG+TGG | - | chr3.4:97930745-97930764 | None:intergenic | 30.0% | |
| TATTAGAGGAGGTAATTTCA+AGG | + | chr3.4:97930582-97930601 | MS.gene064764:CDS | 30.0% | |
| TCATAAATAAGCAACGTATC+AGG | - | chr3.4:97927260-97927279 | None:intergenic | 30.0% | |
| TCTATATAAATTAGGGAAGG+GGG | - | chr3.4:97926500-97926519 | None:intergenic | 30.0% | |
| TGCAAATAGAAACTCCATAT+CGG | - | chr3.4:97926179-97926198 | None:intergenic | 30.0% | |
| TTATCATAGGTCACTAGAAA+GGG | + | chr3.4:97926744-97926763 | MS.gene064764:intron | 30.0% | |
| TTGAATGCAAAAATTCAGCT+TGG | - | chr3.4:97925768-97925787 | None:intergenic | 30.0% | |
| ! | AATTTAAAACCTCCTTCTTG+AGG | - | chr3.4:97926977-97926996 | None:intergenic | 30.0% |
| ! | ACAATTAGTCTCAACAGATA+TGG | + | chr3.4:97927010-97927029 | MS.gene064764:CDS | 30.0% |
| ! | AGGCGATTTAACATATTTTG+AGG | - | chr3.4:97925711-97925730 | None:intergenic | 30.0% |
| ! | CATTTTACAAATATCCCTGA+GGG | - | chr3.4:97926107-97926126 | None:intergenic | 30.0% |
| ! | GTTAATAAGTTTTGCTGAGA+TGG | + | chr3.4:97927037-97927056 | MS.gene064764:CDS | 30.0% |
| ! | GTTATGAAATTGTGGGTTAA+TGG | + | chr3.4:97929395-97929414 | MS.gene064764:intron | 30.0% |
| ! | GTTCTTTGCTTGTTAAAGTT+AGG | + | chr3.4:97927701-97927720 | MS.gene064764:intron | 30.0% |
| ! | TATTGATATTTTCTTCCCTC+TGG | - | chr3.4:97926877-97926896 | None:intergenic | 30.0% |
| ! | TATTTAAAACCTGACAGGTA+TGG | - | chr3.4:97929986-97930005 | None:intergenic | 30.0% |
| ! | TCATTTTACAAATATCCCTG+AGG | - | chr3.4:97926108-97926127 | None:intergenic | 30.0% |
| ! | TTCCGGAATTCCATAATTTT+AGG | - | chr3.4:97926001-97926020 | None:intergenic | 30.0% |
| !! | AACCTACAAAAAGCATTCAA+TGG | - | chr3.4:97927731-97927750 | None:intergenic | 30.0% |
| !! | AACGTTTTGGATATTATGGA+TGG | + | chr3.4:97930752-97930771 | MS.gene064764:CDS | 30.0% |
| !! | ATGGCTCTAATAATGTGATT+AGG | + | chr3.4:97929137-97929156 | MS.gene064764:intron | 30.0% |
| !! | GAAAGCTTTATTTGGAATCA+TGG | + | chr3.4:97929058-97929077 | MS.gene064764:intron | 30.0% |
| !! | GCTTACTAAGTAAAAGCATT+TGG | + | chr3.4:97929201-97929220 | MS.gene064764:intron | 30.0% |
| !! | TTCACTTTGAGATTCTAGTA+TGG | + | chr3.4:97926650-97926669 | MS.gene064764:intron | 30.0% |
| !! | TTCCATTGAATGCTTTTTGT+AGG | + | chr3.4:97927726-97927745 | MS.gene064764:intron | 30.0% |
| !!! | AAGGAGGTTTTAAATTCAGA+AGG | + | chr3.4:97926981-97927000 | MS.gene064764:CDS | 30.0% |
| !!! | ATCATTTTTTCTGGATGGAT+TGG | + | chr3.4:97929179-97929198 | MS.gene064764:intron | 30.0% |
| !!! | ATCTTTTTTTCCACTTTGCT+GGG | + | chr3.4:97926206-97926225 | MS.gene064764:intron | 30.0% |
| !!! | ATGGCTATGGTTTTAAATTG+CGG | + | chr3.4:97925665-97925684 | MS.gene064764:intron | 30.0% |
| !!! | GCTAAATCATTTTTTCTGGA+TGG | + | chr3.4:97929174-97929193 | MS.gene064764:intron | 30.0% |
| !!! | TATCTTTTTTTCCACTTTGC+TGG | + | chr3.4:97926205-97926224 | MS.gene064764:intron | 30.0% |
| AAAATATTTCTCAGGTCACC+AGG | - | chr3.4:97928136-97928155 | None:intergenic | 35.0% | |
| AAACATTCAGTTCCTCAAGA+AGG | + | chr3.4:97926962-97926981 | MS.gene064764:CDS | 35.0% | |
| AAATGAAGAAATTCCACCAC+AGG | - | chr3.4:97926692-97926711 | None:intergenic | 35.0% | |
| AACAGGAACATCAGTTATCA+TGG | - | chr3.4:97930254-97930273 | None:intergenic | 35.0% | |
| AACATCTGTTACCCATTGAT+AGG | + | chr3.4:97928076-97928095 | MS.gene064764:intron | 35.0% | |
| AATTTCAATCTTCAAGAGGC+AGG | - | chr3.4:97929809-97929828 | None:intergenic | 35.0% | |
| ACAAAGTTCAAATTCCCTCA+GGG | + | chr3.4:97926090-97926109 | MS.gene064764:intron | 35.0% | |
| ACTAGAAAGGGCTCTTTATT+GGG | + | chr3.4:97926756-97926775 | MS.gene064764:CDS | 35.0% | |
| AGATTAGACTTGGATGTCTT+GGG | + | chr3.4:97927380-97927399 | MS.gene064764:intron | 35.0% | |
| ATATGTGTAAAGACCCACAA+TGG | + | chr3.4:97927200-97927219 | MS.gene064764:CDS | 35.0% | |
| ATCATGACATATAGATAGGC+AGG | - | chr3.4:97928812-97928831 | None:intergenic | 35.0% | |
| ATCCAAAACTTCATTCAGGT+AGG | - | chr3.4:97928437-97928456 | None:intergenic | 35.0% | |
| ATCCATTTCTATCCAGAAAG+AGG | + | chr3.4:97929699-97929718 | MS.gene064764:CDS | 35.0% | |
| ATTAGCAAAAGTGAGGAACT+TGG | + | chr3.4:97930620-97930639 | MS.gene064764:CDS | 35.0% | |
| ATTGGGTAAAGCTAGCTATA+GGG | + | chr3.4:97926773-97926792 | MS.gene064764:CDS | 35.0% | |
| ATTTCCTTCGGTAGCAATTT+CGG | - | chr3.4:97925891-97925910 | None:intergenic | 35.0% | |
| CTTATCATAGGTCACTAGAA+AGG | + | chr3.4:97926743-97926762 | MS.gene064764:intron | 35.0% | |
| GAAGATTTATGCACCATTTC+CGG | - | chr3.4:97926018-97926037 | None:intergenic | 35.0% | |
| GGAAAACTGTGAGATCATTA+AGG | + | chr3.4:97929222-97929241 | MS.gene064764:intron | 35.0% | |
| GGAATTTGAACTTTGTCTCT+TGG | - | chr3.4:97926086-97926105 | None:intergenic | 35.0% | |
| GGGGGAAACTATTAGTAATT+AGG | - | chr3.4:97926482-97926501 | None:intergenic | 35.0% | |
| GTGAAATAAAATGGCTCCTT+TGG | - | chr3.4:97926928-97926947 | None:intergenic | 35.0% | |
| TACCTCTTTCTGGATAGAAA+TGG | - | chr3.4:97929704-97929723 | None:intergenic | 35.0% | |
| TAGCTCAACCACAAAAATGA+AGG | - | chr3.4:97928954-97928973 | None:intergenic | 35.0% | |
| TATAATGTGTCCCTCGTATT+TGG | - | chr3.4:97929631-97929650 | None:intergenic | 35.0% | |
| TATTGGGTAAAGCTAGCTAT+AGG | + | chr3.4:97926772-97926791 | MS.gene064764:CDS | 35.0% | |
| TATTTCCAGCTACGAAAACA+AGG | - | chr3.4:97930032-97930051 | None:intergenic | 35.0% | |
| TCAAACTTGAGACCTTTGAA+AGG | + | chr3.4:97925910-97925929 | MS.gene064764:intron | 35.0% | |
| TCAGTTATCATGGATTCTCA+TGG | - | chr3.4:97930244-97930263 | None:intergenic | 35.0% | |
| TCATCACATCTAGTATGCTT+AGG | + | chr3.4:97928722-97928741 | MS.gene064764:intron | 35.0% | |
| TCATGACATATAGATAGGCA+GGG | - | chr3.4:97928811-97928830 | None:intergenic | 35.0% | |
| TCCAAAACTTCATTCAGGTA+GGG | - | chr3.4:97928436-97928455 | None:intergenic | 35.0% | |
| TCTTTGGTCCAGATATTTAG+AGG | + | chr3.4:97928340-97928359 | MS.gene064764:CDS | 35.0% | |
| TGTTCATACCATGATTTCCA+AGG | - | chr3.4:97928626-97928645 | None:intergenic | 35.0% | |
| TTATCTCATTGGTGAACTGA+TGG | + | chr3.4:97927514-97927533 | MS.gene064764:intron | 35.0% | |
| TTCTTGATACACTTGGAAGT+GGG | + | chr3.4:97926805-97926824 | MS.gene064764:CDS | 35.0% | |
| TTGAGATTCTAGTATGGCAT+TGG | + | chr3.4:97926656-97926675 | MS.gene064764:intron | 35.0% | |
| TTGATTGTATTTGCCGCAAA+TGG | - | chr3.4:97929931-97929950 | None:intergenic | 35.0% | |
| TTGGATATTATGGATGGCTT+AGG | + | chr3.4:97930758-97930777 | MS.gene064764:CDS | 35.0% | |
| TTTGACAAAAAGGGGAAGAT+TGG | - | chr3.4:97927915-97927934 | None:intergenic | 35.0% | |
| ! | AATGGCTTTTCCGATGAATT+CGG | + | chr3.4:97925499-97925518 | MS.gene064764:CDS | 35.0% |
| ! | CAGTTTTCATTTGTATCACC+AGG | + | chr3.4:97927623-97927642 | MS.gene064764:intron | 35.0% |
| ! | GTCTCAAGTTTGATTTCCTT+CGG | - | chr3.4:97925903-97925922 | None:intergenic | 35.0% |
| ! | TAGTCTAGTTCATCATACTG+CGG | + | chr3.4:97927451-97927470 | MS.gene064764:CDS | 35.0% |
| ! | TCTAAGTTCTAACCTTTCAG+AGG | - | chr3.4:97927874-97927893 | None:intergenic | 35.0% |
| ! | TTCCCCTTTTTGTCAAATCT+TGG | + | chr3.4:97927918-97927937 | MS.gene064764:intron | 35.0% |
| ! | TTGGTGTCTCTTCTTATCAT+AGG | + | chr3.4:97926731-97926750 | MS.gene064764:intron | 35.0% |
| ! | TTTTAAATTGCGGTCATCAG+AGG | - | chr3.4:97925731-97925750 | None:intergenic | 35.0% |
| !! | AATAGCTGCCTTCATTTTTG+TGG | + | chr3.4:97928943-97928962 | MS.gene064764:intron | 35.0% |
| !! | CAGCAATTTCTGTTTCTATC+AGG | + | chr3.4:97929582-97929601 | MS.gene064764:intron | 35.0% |
| !! | TTTCTGGCGAAAGCTTTATT+TGG | + | chr3.4:97929050-97929069 | MS.gene064764:intron | 35.0% |
| AAATAACAAGTGGAGTCAGC+AGG | + | chr3.4:97930216-97930235 | MS.gene064764:intron | 40.0% | |
| AACGTTATAGTTGTGGTGGT+TGG | - | chr3.4:97930738-97930757 | None:intergenic | 40.0% | |
| AAGACTTAAGGACATGGCTA+TGG | + | chr3.4:97925652-97925671 | MS.gene064764:intron | 40.0% | |
| ACAAATGGATGTCCAGGAAA+AGG | - | chr3.4:97929734-97929753 | None:intergenic | 40.0% | |
| ACCTACATCGACATTTCTCA+AGG | + | chr3.4:97927227-97927246 | MS.gene064764:CDS | 40.0% | |
| ACCTTGAGAAATGTCGATGT+AGG | - | chr3.4:97927231-97927250 | None:intergenic | 40.0% | |
| ACCTTTCAGAGGAAGATTCA+AGG | - | chr3.4:97927863-97927882 | None:intergenic | 40.0% | |
| ACGAGGGACACATTATATCA+AGG | + | chr3.4:97929634-97929653 | MS.gene064764:CDS | 40.0% | |
| ACTAAAGGTCCTCAAAGACT+AGG | + | chr3.4:97929441-97929460 | MS.gene064764:CDS | 40.0% | |
| ACTTGGAGGGATGAACAATT+TGG | + | chr3.4:97925375-97925394 | MS.gene064764:CDS | 40.0% | |
| AGACAGAAACAACAAGCCAT+TGG | + | chr3.4:97930529-97930548 | MS.gene064764:CDS | 40.0% | |
| AGCTAGATCAAAGCTCTTGA+TGG | + | chr3.4:97925856-97925875 | MS.gene064764:intron | 40.0% | |
| AGTGGATAGACCGAATTCAT+CGG | - | chr3.4:97925512-97925531 | None:intergenic | 40.0% | |
| ATACAAATGCCTCTAGTTGC+TGG | + | chr3.4:97926556-97926575 | MS.gene064764:intron | 40.0% | |
| ATCTATTGCGTAGAACTCGT+TGG | + | chr3.4:97929327-97929346 | MS.gene064764:intron | 40.0% | |
| ATGCCAAAGTTAAACACCAG+TGG | + | chr3.4:97926828-97926847 | MS.gene064764:CDS | 40.0% | |
| ATTGTTAACAGGGCTCATCA+AGG | + | chr3.4:97930096-97930115 | MS.gene064764:intron | 40.0% | |
| CAAAGTTAAACACCAGTGGT+GGG | + | chr3.4:97926832-97926851 | MS.gene064764:CDS | 40.0% | |
| CAAATGGATGTCCAGGAAAA+GGG | - | chr3.4:97929733-97929752 | None:intergenic | 40.0% | |
| CACTAGAAAGGGCTCTTTAT+TGG | + | chr3.4:97926755-97926774 | MS.gene064764:CDS | 40.0% | |
| CAGATTAGACTTGGATGTCT+TGG | + | chr3.4:97927379-97927398 | MS.gene064764:intron | 40.0% | |
| CATTTATGTTTCCCTGCTTC+TGG | + | chr3.4:97927668-97927687 | MS.gene064764:intron | 40.0% | |
| CCAAAACGTTATAGTTGTGG+TGG | - | chr3.4:97930742-97930761 | None:intergenic | 40.0% | |
| CCAAAACTTCATTCAGGTAG+GGG | - | chr3.4:97928435-97928454 | None:intergenic | 40.0% | |
| CGTTACTGCAATGTCAAAAC+AGG | - | chr3.4:97930271-97930290 | None:intergenic | 40.0% | |
| CTCAACTTTCTCCAGAAGAT+AGG | + | chr3.4:97930555-97930574 | MS.gene064764:CDS | 40.0% | |
| CTCCTTCACTCATATCAAAG+CGG | + | chr3.4:97929876-97929895 | MS.gene064764:CDS | 40.0% | |
| CTTACTTAACCCATTTGGGT+TGG | - | chr3.4:97925971-97925990 | None:intergenic | 40.0% | |
| CTTGGAGGGATGAACAATTT+GGG | + | chr3.4:97925376-97925395 | MS.gene064764:CDS | 40.0% | |
| GACAAAGTTCAAATTCCCTC+AGG | + | chr3.4:97926089-97926108 | MS.gene064764:intron | 40.0% | |
| GACAGAAACAACAAGCCATT+GGG | + | chr3.4:97930530-97930549 | MS.gene064764:CDS | 40.0% | |
| GGGCTCACTTATTCATATCA+TGG | - | chr3.4:97926533-97926552 | None:intergenic | 40.0% | |
| GTGGAAGTTCTTGATACACT+TGG | + | chr3.4:97926798-97926817 | MS.gene064764:CDS | 40.0% | |
| GTTCTTGATACACTTGGAAG+TGG | + | chr3.4:97926804-97926823 | MS.gene064764:CDS | 40.0% | |
| GTTGTTACAGTCTTCTTCCA+TGG | + | chr3.4:97929118-97929137 | MS.gene064764:intron | 40.0% | |
| TACACGCTCTGTATAAATGC+AGG | + | chr3.4:97928245-97928264 | MS.gene064764:intron | 40.0% | |
| TAGAGGAGGTAATTTCAAGG+AGG | + | chr3.4:97930585-97930604 | MS.gene064764:CDS | 40.0% | |
| TATCCACTTCCGCTTCAATT+GGG | + | chr3.4:97925524-97925543 | MS.gene064764:CDS | 40.0% | |
| TCACCTGATAAGGAGTTCTT+GGG | + | chr3.4:97930698-97930717 | MS.gene064764:CDS | 40.0% | |
| TCACGGGAAGTAGTTAGATT+TGG | + | chr3.4:97927175-97927194 | MS.gene064764:CDS | 40.0% | |
| TCAGCTTGGTTTCTTGAACA+TGG | - | chr3.4:97925754-97925773 | None:intergenic | 40.0% | |
| TCATACTGCGGTAAGCTTAT+TGG | + | chr3.4:97927463-97927482 | MS.gene064764:intron | 40.0% | |
| TCCTTGAATCTTCCTCTGAA+AGG | + | chr3.4:97927859-97927878 | MS.gene064764:CDS | 40.0% | |
| TGACATTGCAGTAACGACTT+TGG | + | chr3.4:97930275-97930294 | MS.gene064764:intron | 40.0% | |
| TTACAAGGTCAAGCTCTTAG+AGG | - | chr3.4:97926061-97926080 | None:intergenic | 40.0% | |
| TTCACCTGATAAGGAGTTCT+TGG | + | chr3.4:97930697-97930716 | MS.gene064764:CDS | 40.0% | |
| TTCCGCTTTGATATGAGTGA+AGG | - | chr3.4:97929881-97929900 | None:intergenic | 40.0% | |
| TTGGAGGGATGAACAATTTG+GGG | + | chr3.4:97925377-97925396 | MS.gene064764:CDS | 40.0% | |
| TTGGTCCAGATATTTAGAGG+AGG | + | chr3.4:97928343-97928362 | MS.gene064764:CDS | 40.0% | |
| TTTGAAAGGAGCTCACTCAA+AGG | + | chr3.4:97925924-97925943 | MS.gene064764:intron | 40.0% | |
| TTTGAGTGAGCTCCTTTCAA+AGG | - | chr3.4:97925925-97925944 | None:intergenic | 40.0% | |
| ! | AGGGCACTCTTAATACTGTT+TGG | - | chr3.4:97929664-97929683 | None:intergenic | 40.0% |
| ! | ATGAACAATTTGGGGTTCTC+TGG | + | chr3.4:97925385-97925404 | MS.gene064764:CDS | 40.0% |
| ! | CCACCACAACTATAACGTTT+TGG | + | chr3.4:97930739-97930758 | MS.gene064764:CDS | 40.0% |
| ! | CTGAACTTCAGTCTAAGATG+CGG | + | chr3.4:97930486-97930505 | MS.gene064764:CDS | 40.0% |
| ! | GAACTCCTGCATTGTCTTTT+CGG | - | chr3.4:97927429-97927448 | None:intergenic | 40.0% |
| ! | GATTTTTGTCCATACCTGTC+AGG | + | chr3.4:97929974-97929993 | MS.gene064764:intron | 40.0% |
| ! | GGTGCTGTCAAGTATACTAA+AGG | + | chr3.4:97929426-97929445 | MS.gene064764:CDS | 40.0% |
| ! | GTAGCACCAGTGTTGTTAAA+CGG | - | chr3.4:97926460-97926479 | None:intergenic | 40.0% |
| ! | GTTTTGCTGAGATGGACAAA+AGG | + | chr3.4:97927045-97927064 | MS.gene064764:CDS | 40.0% |
| ! | TGAAATTGTGGGTTAATGGC+AGG | + | chr3.4:97929399-97929418 | MS.gene064764:intron | 40.0% |
| ! | TGAACAATTTGGGGTTCTCT+GGG | + | chr3.4:97925386-97925405 | MS.gene064764:CDS | 40.0% |
| !! | AACTAGAGGCATTTGTATGG+GGG | - | chr3.4:97926554-97926573 | None:intergenic | 40.0% |
| !! | AGCAACTAGAGGCATTTGTA+TGG | - | chr3.4:97926557-97926576 | None:intergenic | 40.0% |
| !! | AGTATGGCATTGGCATGTTA+TGG | + | chr3.4:97926666-97926685 | MS.gene064764:intron | 40.0% |
| !! | CAACTAGAGGCATTTGTATG+GGG | - | chr3.4:97926555-97926574 | None:intergenic | 40.0% |
| !! | CTGTTTTTCCCCAATTGAAG+CGG | - | chr3.4:97925536-97925555 | None:intergenic | 40.0% |
| !! | GCAACTAGAGGCATTTGTAT+GGG | - | chr3.4:97926556-97926575 | None:intergenic | 40.0% |
| !! | TCCTCACTTTTGCTAATTCC+CGG | - | chr3.4:97930617-97930636 | None:intergenic | 40.0% |
| !!! | TTTTTTTTTTCTCCCCGTGC+TGG | + | chr3.4:97930006-97930025 | MS.gene064764:intron | 40.0% |
| AATAACGCGTGAGCAATTGC+AGG | - | chr3.4:97930061-97930080 | None:intergenic | 45.0% | |
| ACTCATAGCAAACCAGAAGC+AGG | - | chr3.4:97927683-97927702 | None:intergenic | 45.0% | |
| AGACTGAAGTTCAGGTCTCT+TGG | - | chr3.4:97930480-97930499 | None:intergenic | 45.0% | |
| AGATGCCGAAAAGACAATGC+AGG | + | chr3.4:97927421-97927440 | MS.gene064764:CDS | 45.0% | |
| AGCAATGCAGAAGAACTTGG+AGG | + | chr3.4:97925361-97925380 | MS.gene064764:CDS | 45.0% | |
| AGGAGGTAATTTCAAGGAGG+AGG | + | chr3.4:97930588-97930607 | MS.gene064764:CDS | 45.0% | |
| AGGGAGGTTATACCTCTTTC+TGG | - | chr3.4:97929714-97929733 | None:intergenic | 45.0% | |
| ATAACGCGTGAGCAATTGCA+GGG | - | chr3.4:97930060-97930079 | None:intergenic | 45.0% | |
| ATCAGTAGGCCAACCCAAAT+GGG | + | chr3.4:97925959-97925978 | MS.gene064764:intron | 45.0% | |
| ATCCACTTCCGCTTCAATTG+GGG | + | chr3.4:97925525-97925544 | MS.gene064764:CDS | 45.0% | |
| ATTGCGTAGAACTCGTTGGA+AGG | + | chr3.4:97929331-97929350 | MS.gene064764:intron | 45.0% | |
| CAAGCAATTCGTGAGTTCCT+TGG | + | chr3.4:97928606-97928625 | MS.gene064764:CDS | 45.0% | |
| CATTCAGTTCCTCAAGAAGG+AGG | + | chr3.4:97926965-97926984 | MS.gene064764:CDS | 45.0% | |
| CCAAAGTTAAACACCAGTGG+TGG | + | chr3.4:97926831-97926850 | MS.gene064764:CDS | 45.0% | |
| CCTTCACAAGTTGTCTATCG+CGG | + | chr3.4:97926397-97926416 | MS.gene064764:intron | 45.0% | |
| CGCATCTTAGACTGAAGTTC+AGG | - | chr3.4:97930488-97930507 | None:intergenic | 45.0% | |
| CGCTTCAATTGGGGAAAAAC+AGG | + | chr3.4:97925534-97925553 | MS.gene064764:CDS | 45.0% | |
| CGTGAGTTCCTTGGAAATCA+TGG | + | chr3.4:97928615-97928634 | MS.gene064764:CDS | 45.0% | |
| CTATCCACTTCCGCTTCAAT+TGG | + | chr3.4:97925523-97925542 | MS.gene064764:CDS | 45.0% | |
| CTCATAGCAAACCAGAAGCA+GGG | - | chr3.4:97927682-97927701 | None:intergenic | 45.0% | |
| CTGAGATGGACAAAAGGTTC+TGG | + | chr3.4:97927051-97927070 | MS.gene064764:intron | 45.0% | |
| CTGTCTTACAGTCTATCAGC+AGG | + | chr3.4:97928174-97928193 | MS.gene064764:intron | 45.0% | |
| CTTTGTCTCTTGGGGTTACA+AGG | - | chr3.4:97926076-97926095 | None:intergenic | 45.0% | |
| GAGAGCAATGCAGAAGAACT+TGG | + | chr3.4:97925358-97925377 | MS.gene064764:CDS | 45.0% | |
| GCAATGCAGAAGAACTTGGA+GGG | + | chr3.4:97925362-97925381 | MS.gene064764:CDS | 45.0% | |
| GCCATATGAACTAGCCATTG+CGG | + | chr3.4:97926348-97926367 | MS.gene064764:intron | 45.0% | |
| GGAGAAAGTTGAGTTCCCAA+TGG | - | chr3.4:97930548-97930567 | None:intergenic | 45.0% | |
| GGTCTCAAGCTAACATCAGT+AGG | + | chr3.4:97925945-97925964 | MS.gene064764:intron | 45.0% | |
| GTACCCAAGAACTCCTTATC+AGG | - | chr3.4:97930704-97930723 | None:intergenic | 45.0% | |
| GTGTAGCCGTGTATATCTTG+CGG | + | chr3.4:97928461-97928480 | MS.gene064764:intron | 45.0% | |
| TCATTCAGGTAGGGGAACAT+GGG | - | chr3.4:97928427-97928446 | None:intergenic | 45.0% | |
| TGAAGTTCAGGTCTCTTGGA+AGG | - | chr3.4:97930476-97930495 | None:intergenic | 45.0% | |
| TGCAAGACAAATGGATGTCC+AGG | - | chr3.4:97929740-97929759 | None:intergenic | 45.0% | |
| TTCATTCAGGTAGGGGAACA+TGG | - | chr3.4:97928428-97928447 | None:intergenic | 45.0% | |
| TTGGTGAATGGGCAAACACA+AGG | + | chr3.4:97930130-97930149 | MS.gene064764:CDS | 45.0% | |
| TTTAAATGACGCCCCACAAG+TGG | - | chr3.4:97925837-97925856 | None:intergenic | 45.0% | |
| ! | AAAGTGTCTGGAGGCGAATT+GGG | - | chr3.4:97930325-97930344 | None:intergenic | 45.0% |
| ! | AGGTATAACCTCCCTTTTCC+TGG | + | chr3.4:97929719-97929738 | MS.gene064764:intron | 45.0% |
| ! | CCACCACTGGTGTTTAACTT+TGG | - | chr3.4:97926834-97926853 | None:intergenic | 45.0% |
| ! | CCCCTACCTGAATGAAGTTT+TGG | + | chr3.4:97928432-97928451 | MS.gene064764:intron | 45.0% |
| ! | CTCTGGGAAGGTTCTTAAGA+AGG | + | chr3.4:97925402-97925421 | MS.gene064764:CDS | 45.0% |
| ! | GATGTAGGTTGTGCCATTGT+GGG | - | chr3.4:97927216-97927235 | None:intergenic | 45.0% |
| ! | GCGAATTGGGTTGCTTTCTT+TGG | - | chr3.4:97930312-97930331 | None:intergenic | 45.0% |
| ! | GTATCACTCAGTGCTGTTGA+AGG | + | chr3.4:97926292-97926311 | MS.gene064764:intron | 45.0% |
| ! | TAAAGTGTCTGGAGGCGAAT+TGG | - | chr3.4:97930326-97930345 | None:intergenic | 45.0% |
| ! | TATCGGCGTAGTAAAGTGTC+TGG | - | chr3.4:97930337-97930356 | None:intergenic | 45.0% |
| !! | ACTAGAGGCATTTGTATGGG+GGG | - | chr3.4:97926553-97926572 | None:intergenic | 45.0% |
| !! | CCTCACTTTTGCTAATTCCC+GGG | - | chr3.4:97930616-97930635 | None:intergenic | 45.0% |
| !! | CTCTCAAGACCAAAAGTGCT+GGG | + | chr3.4:97930672-97930691 | MS.gene064764:CDS | 45.0% |
| !! | CTTTGGATGGGTTGGTGAAT+GGG | + | chr3.4:97930119-97930138 | MS.gene064764:CDS | 45.0% |
| !! | GAAATGGATTGCAACCGAGA+TGG | - | chr3.4:97929688-97929707 | None:intergenic | 45.0% |
| !! | TTAAGAGTGCCCTTCCATCT+CGG | + | chr3.4:97929671-97929690 | MS.gene064764:CDS | 45.0% |
| !!! | CAGCACTTTTGGTCTTGAGA+GGG | - | chr3.4:97930673-97930692 | None:intergenic | 45.0% |
| AACAGGGCTCATCAAGGCTT+TGG | + | chr3.4:97930102-97930121 | MS.gene064764:intron | 50.0% | |
| AATTTCAAGGAGGAGGAGCC+CGG | + | chr3.4:97930595-97930614 | MS.gene064764:CDS | 50.0% | |
| ACAAAATGCCTCGAGGCCAA+TGG | + | chr3.4:97930430-97930449 | MS.gene064764:CDS | 50.0% | |
| ACTAAAGCTCCCGCATAAGC+AGG | - | chr3.4:97926246-97926265 | None:intergenic | 50.0% | |
| AGAAGGAATGTGGGCAACAG+AGG | - | chr3.4:97928765-97928784 | None:intergenic | 50.0% | |
| AGCAGTAAGCCAGCAACTAG+AGG | - | chr3.4:97926568-97926587 | None:intergenic | 50.0% | |
| AGTTCAGGTCTCTTGGAAGG+AGG | - | chr3.4:97930473-97930492 | None:intergenic | 50.0% | |
| ATGGATGTCCAGGAAAAGGG+AGG | - | chr3.4:97929730-97929749 | None:intergenic | 50.0% | |
| CATCAGTAGGCCAACCCAAA+TGG | + | chr3.4:97925958-97925977 | MS.gene064764:intron | 50.0% | |
| CATTGGCATGTTATGGCCTG+TGG | + | chr3.4:97926673-97926692 | MS.gene064764:intron | 50.0% | |
| CCCGGGAATTAGCAAAAGTG+AGG | + | chr3.4:97930613-97930632 | MS.gene064764:CDS | 50.0% | |
| CCGCGATAGACAACTTGTGA+AGG | - | chr3.4:97926400-97926419 | None:intergenic | 50.0% | |
| CCTCAAAGACTAGGTGAAGC+TGG | + | chr3.4:97929450-97929469 | MS.gene064764:CDS | 50.0% | |
| CTAAAGCTCCCGCATAAGCA+GGG | - | chr3.4:97926245-97926264 | None:intergenic | 50.0% | |
| CTACGAAAACAAGGCCAGCA+CGG | - | chr3.4:97930023-97930042 | None:intergenic | 50.0% | |
| CTGCAGCCGCAAGATATACA+CGG | - | chr3.4:97928470-97928489 | None:intergenic | 50.0% | |
| CTGCCAAGAAAACTCATGCC+AGG | + | chr3.4:97930645-97930664 | MS.gene064764:CDS | 50.0% | |
| CTGGTCTAGTCGTTCTGTGT+TGG | + | chr3.4:97926153-97926172 | MS.gene064764:intron | 50.0% | |
| GATCCAGACAAAATGCCTCG+AGG | + | chr3.4:97930423-97930442 | MS.gene064764:CDS | 50.0% | |
| GGATTGCAACCGAGATGGAA+GGG | - | chr3.4:97929683-97929702 | None:intergenic | 50.0% | |
| GGGTAAAGCTAGCTATAGGG+CGG | + | chr3.4:97926776-97926795 | MS.gene064764:CDS | 50.0% | |
| TAAAGCTAGCTATAGGGCGG+TGG | + | chr3.4:97926779-97926798 | MS.gene064764:CDS | 50.0% | |
| TACCCCATGACATTCCACCA+TGG | + | chr3.4:97926431-97926450 | MS.gene064764:intron | 50.0% | |
| TACGAAAACAAGGCCAGCAC+GGG | - | chr3.4:97930022-97930041 | None:intergenic | 50.0% | |
| TCAGTGGCTCGTACCATTTG+CGG | + | chr3.4:97929915-97929934 | MS.gene064764:CDS | 50.0% | |
| TCCACCGAAATTGCTACCGA+AGG | + | chr3.4:97925884-97925903 | MS.gene064764:intron | 50.0% | |
| TCCTTCGGTAGCAATTTCGG+TGG | - | chr3.4:97925888-97925907 | None:intergenic | 50.0% | |
| TCTCTGGCAAGCTTTCCAGA+GGG | + | chr3.4:97926859-97926878 | MS.gene064764:CDS | 50.0% | |
| TGCTGGGAGTTCACCTGATA+AGG | + | chr3.4:97930688-97930707 | MS.gene064764:CDS | 50.0% | |
| TGGATTGCAACCGAGATGGA+AGG | - | chr3.4:97929684-97929703 | None:intergenic | 50.0% | |
| TGGCCTCCGTTTAACAACAC+TGG | + | chr3.4:97926451-97926470 | MS.gene064764:intron | 50.0% | |
| TTCCCCAATTGAAGCGGAAG+TGG | - | chr3.4:97925530-97925549 | None:intergenic | 50.0% | |
| TTGTTAAACGGAGGCCATGG+TGG | - | chr3.4:97926448-97926467 | None:intergenic | 50.0% | |
| ! | AGGCCATGGTGGAATGTCAT+GGG | - | chr3.4:97926437-97926456 | None:intergenic | 50.0% |
| ! | AGGTGAACTCCCAGCACTTT+TGG | - | chr3.4:97930684-97930703 | None:intergenic | 50.0% |
| ! | ATGCGGGAGCTTTAGTGCAA+TGG | + | chr3.4:97926250-97926269 | MS.gene064764:intron | 50.0% |
| ! | CAATTTGGGGTTCTCTGGGA+AGG | + | chr3.4:97925390-97925409 | MS.gene064764:CDS | 50.0% |
| ! | CCAGCTTCACCTAGTCTTTG+AGG | - | chr3.4:97929453-97929472 | None:intergenic | 50.0% |
| ! | CCTCTCAAGACCAAAAGTGC+TGG | + | chr3.4:97930671-97930690 | MS.gene064764:CDS | 50.0% |
| ! | CGATGTAGGTTGTGCCATTG+TGG | - | chr3.4:97927217-97927236 | None:intergenic | 50.0% |
| ! | GCACCAGTGTTGTTAAACGG+AGG | - | chr3.4:97926457-97926476 | None:intergenic | 50.0% |
| ! | GCCGCAATGGCTAGTTCATA+TGG | - | chr3.4:97926352-97926371 | None:intergenic | 50.0% |
| ! | GTGCCTGGCATGAGTTTTCT+TGG | - | chr3.4:97930651-97930670 | None:intergenic | 50.0% |
| ! | GTGTTGTTAAACGGAGGCCA+TGG | - | chr3.4:97926451-97926470 | None:intergenic | 50.0% |
| ! | TCGTTCTGTGTTGGCCGATA+TGG | + | chr3.4:97926162-97926181 | MS.gene064764:intron | 50.0% |
| ! | TGTGGGTTAATGGCAGGTAC+TGG | + | chr3.4:97929405-97929424 | MS.gene064764:intron | 50.0% |
| !! | CATCAAGGCTTTGGATGGGT+TGG | + | chr3.4:97930111-97930130 | MS.gene064764:CDS | 50.0% |
| !! | GCTTTGGATGGGTTGGTGAA+TGG | + | chr3.4:97930118-97930137 | MS.gene064764:CDS | 50.0% |
| !! | GGCTCATCAAGGCTTTGGAT+GGG | + | chr3.4:97930107-97930126 | MS.gene064764:CDS | 50.0% |
| !!! | CCAGCACTTTTGGTCTTGAG+AGG | - | chr3.4:97930674-97930693 | None:intergenic | 50.0% |
| AATGACGCCCCACAAGTGGA+CGG | - | chr3.4:97925833-97925852 | None:intergenic | 55.0% | |
| ACGAAAACAAGGCCAGCACG+GGG | - | chr3.4:97930021-97930040 | None:intergenic | 55.0% | |
| ATGGGAGCTGTTTGTTCGGC+GGG | + | chr3.4:97925328-97925347 | MS.gene064764:CDS | 55.0% | |
| ATTTCAAGGAGGAGGAGCCC+GGG | + | chr3.4:97930596-97930615 | MS.gene064764:CDS | 55.0% | |
| CAGGTAGGGGAACATGGGAA+GGG | - | chr3.4:97928422-97928441 | None:intergenic | 55.0% | |
| GGAATGTGGGCAACAGAGGT+AGG | - | chr3.4:97928761-97928780 | None:intergenic | 55.0% | |
| GTCTCTGGCAAGCTTTCCAG+AGG | + | chr3.4:97926858-97926877 | MS.gene064764:CDS | 55.0% | |
| TCAGGTAGGGGAACATGGGA+AGG | - | chr3.4:97928423-97928442 | None:intergenic | 55.0% | |
| TGGCATGTTATGGCCTGTGG+TGG | + | chr3.4:97926676-97926695 | MS.gene064764:intron | 55.0% | |
| TTGGAAGGAGGAGACCGTGT+GGG | - | chr3.4:97930461-97930480 | None:intergenic | 55.0% | |
| ! | CGGCGTAGTAAAGTGTCTGG+AGG | - | chr3.4:97930334-97930353 | None:intergenic | 55.0% |
| ! | GAGGCCATGGTGGAATGTCA+TGG | - | chr3.4:97926438-97926457 | None:intergenic | 55.0% |
| ! | GGCCATGGTGGAATGTCATG+GGG | - | chr3.4:97926436-97926455 | None:intergenic | 55.0% |
| !! | ACCAGTGGTGGGTTTGTCTC+TGG | + | chr3.4:97926843-97926862 | MS.gene064764:CDS | 55.0% |
| !! | GACGGTGGGATCGGATTAGT+CGG | - | chr3.4:97925815-97925834 | None:intergenic | 55.0% |
| !! | GGGCTCATCAAGGCTTTGGA+TGG | + | chr3.4:97930106-97930125 | MS.gene064764:intron | 55.0% |
| !! | TGGCCTCGAGGCATTTTGTC+TGG | - | chr3.4:97930429-97930448 | None:intergenic | 55.0% |
| !! | TTTGGTCTTGAGAGGGTGCC+TGG | - | chr3.4:97930666-97930685 | None:intergenic | 55.0% |
| !!! | GCTGGCCTTGTTTTCGTAGC+TGG | + | chr3.4:97930024-97930043 | MS.gene064764:intron | 55.0% |
| ACTTTGCTGGGACCCCTTCC+CGG | + | chr3.4:97926218-97926237 | MS.gene064764:intron | 60.0% | |
| AGCTGTTTGTTCGGCGGGGA+TGG | + | chr3.4:97925333-97925352 | MS.gene064764:CDS | 60.0% | |
| CATAAGCAGGGTCCGGGAAG+GGG | - | chr3.4:97926233-97926252 | None:intergenic | 60.0% | |
| CCACAAGTGGACGGTGGGAT+CGG | - | chr3.4:97925824-97925843 | None:intergenic | 60.0% | |
| CGATCCCACCGTCCACTTGT+GGG | + | chr3.4:97925822-97925841 | MS.gene064764:intron | 60.0% | |
| CTGTTTGTTCGGCGGGGATG+GGG | + | chr3.4:97925335-97925354 | MS.gene064764:CDS | 60.0% | |
| CTTCCCGGACCCTGCTTATG+CGG | + | chr3.4:97926233-97926252 | MS.gene064764:intron | 60.0% | |
| CTTGGAAGGAGGAGACCGTG+TGG | - | chr3.4:97930462-97930481 | None:intergenic | 60.0% | |
| GAACTAGCCATTGCGGCCCA+TGG | + | chr3.4:97926355-97926374 | MS.gene064764:intron | 60.0% | |
| GATCCCACCGTCCACTTGTG+GGG | + | chr3.4:97925823-97925842 | MS.gene064764:intron | 60.0% | |
| GCATAAGCAGGGTCCGGGAA+GGG | - | chr3.4:97926234-97926253 | None:intergenic | 60.0% | |
| GCCAGAGACAAACCCACCAC+TGG | - | chr3.4:97926847-97926866 | None:intergenic | 60.0% | |
| GCTGTTTGTTCGGCGGGGAT+GGG | + | chr3.4:97925334-97925353 | MS.gene064764:CDS | 60.0% | |
| GGCCAATGGCAATGCCCACA+CGG | + | chr3.4:97930444-97930463 | MS.gene064764:CDS | 60.0% | |
| GTGGTGGTTGGCGATGAGTG+TGG | - | chr3.4:97930726-97930745 | None:intergenic | 60.0% | |
| TGAAGGAACGCCCGCCATTG+TGG | - | chr3.4:97926383-97926402 | None:intergenic | 60.0% | |
| TGGGAGCTGTTTGTTCGGCG+GGG | + | chr3.4:97925329-97925348 | MS.gene064764:CDS | 60.0% | |
| TGTTTGTTCGGCGGGGATGG+GGG | + | chr3.4:97925336-97925355 | MS.gene064764:CDS | 60.0% | |
| TTCCCGGACCCTGCTTATGC+GGG | + | chr3.4:97926234-97926253 | MS.gene064764:intron | 60.0% | |
| ! | GACCGTGTGGGCATTGCCAT+TGG | - | chr3.4:97930449-97930468 | None:intergenic | 60.0% |
| ACGCCCCACAAGTGGACGGT+GGG | - | chr3.4:97925829-97925848 | None:intergenic | 65.0% | |
| CCGATCCCACCGTCCACTTG+TGG | + | chr3.4:97925821-97925840 | MS.gene064764:intron | 65.0% | |
| CGCATAAGCAGGGTCCGGGA+AGG | - | chr3.4:97926235-97926254 | None:intergenic | 65.0% | |
| CTCCCGCATAAGCAGGGTCC+GGG | - | chr3.4:97926239-97926258 | None:intergenic | 65.0% | |
| GCCCATGGCACCACAATGGC+GGG | + | chr3.4:97926370-97926389 | MS.gene064764:intron | 65.0% | |
| GCTCCCGCATAAGCAGGGTC+CGG | - | chr3.4:97926240-97926259 | None:intergenic | 65.0% | |
| GGCCCATGGCACCACAATGG+CGG | + | chr3.4:97926369-97926388 | MS.gene064764:intron | 65.0% | |
| GGGAAGGGGTCCCAGCAAAG+TGG | - | chr3.4:97926219-97926238 | None:intergenic | 65.0% | |
| TGCGGCCCATGGCACCACAA+TGG | + | chr3.4:97926366-97926385 | MS.gene064764:intron | 65.0% | |
| ! | GGGCATTGCCATTGGCCTCG+AGG | - | chr3.4:97930441-97930460 | None:intergenic | 65.0% |
| !! | GCCCGCCATTGTGGTGCCAT+GGG | - | chr3.4:97926374-97926393 | None:intergenic | 65.0% |
| !! | TGTGGTGCCATGGGCCGCAA+TGG | - | chr3.4:97926365-97926384 | None:intergenic | 65.0% |
| GACGCCCCACAAGTGGACGG+TGG | - | chr3.4:97925830-97925849 | None:intergenic | 70.0% | |
| ! | CGCCCGCCATTGTGGTGCCA+TGG | - | chr3.4:97926375-97926394 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97925328 | 97930787 | 97925328 | ID=MS.gene064764 |
| chr3.4 | mRNA | 97925328 | 97930787 | 97925328 | ID=MS.gene064764.t1;Parent=MS.gene064764 |
| chr3.4 | exon | 97925328 | 97925555 | 97925328 | ID=MS.gene064764.t1.exon1;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97925328 | 97925555 | 97925328 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97926753 | 97927066 | 97926753 | ID=MS.gene064764.t1.exon2;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97926753 | 97927066 | 97926753 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97927156 | 97927248 | 97927156 | ID=MS.gene064764.t1.exon3;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97927156 | 97927248 | 97927156 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97927382 | 97927472 | 97927382 | ID=MS.gene064764.t1.exon4;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97927382 | 97927472 | 97927382 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97927787 | 97927880 | 97927787 | ID=MS.gene064764.t1.exon5;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97927787 | 97927880 | 97927787 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97928267 | 97928364 | 97928267 | ID=MS.gene064764.t1.exon6;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97928267 | 97928364 | 97928267 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97928567 | 97928636 | 97928567 | ID=MS.gene064764.t1.exon7;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97928567 | 97928636 | 97928567 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97929421 | 97929518 | 97929421 | ID=MS.gene064764.t1.exon8;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97929421 | 97929518 | 97929421 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97929604 | 97929720 | 97929604 | ID=MS.gene064764.t1.exon9;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97929604 | 97929720 | 97929604 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97929874 | 97929950 | 97929874 | ID=MS.gene064764.t1.exon10;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97929874 | 97929950 | 97929874 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97930107 | 97930151 | 97930107 | ID=MS.gene064764.t1.exon11;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97930107 | 97930151 | 97930107 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| chr3.4 | exon | 97930286 | 97930787 | 97930286 | ID=MS.gene064764.t1.exon12;Parent=MS.gene064764.t1 |
| chr3.4 | CDS | 97930286 | 97930787 | 97930286 | ID=cds.MS.gene064764.t1;Parent=MS.gene064764.t1 |
| Gene Sequence |
| Protein sequence |
