AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064860.t1 MTR_5g024340 65.278 360 118 3 26 384 23 376 7.89e-173 487
MS.gene064860.t1 MTR_1g086350 51.989 352 138 5 59 385 24 369 2.37e-121 356
MS.gene064860.t1 MTR_1g086350 52.161 347 135 5 64 385 45 385 1.33e-120 355
MS.gene064860.t1 MTR_3g107880 53.216 342 149 4 47 385 44 377 1.84e-120 354
MS.gene064860.t1 MTR_3g107880 53.509 342 147 5 47 385 44 376 1.38e-119 352
MS.gene064860.t1 MTR_3g107880 54.430 316 141 2 73 385 4 319 1.69e-119 349
MS.gene064860.t1 MTR_4g116420 52.500 320 143 4 72 385 67 383 4.25e-114 338
MS.gene064860.t1 MTR_2g033000 52.733 311 134 3 88 385 56 366 3.45e-110 327
MS.gene064860.t1 MTR_4g123080 52.733 311 134 2 88 385 51 361 1.50e-109 325
MS.gene064860.t1 MTR_4g123080 52.733 311 134 2 88 385 69 379 2.71e-109 325
MS.gene064860.t1 MTR_1g086350 53.285 274 102 4 132 385 16 283 1.86e-96 289
MS.gene064860.t1 MTR_4g123080 54.140 157 69 1 232 385 110 266 7.92e-51 171
MS.gene064860.t1 MTR_1g115570 40.435 230 121 7 131 357 125 341 5.37e-44 156
MS.gene064860.t1 MTR_1g014640 37.828 267 142 8 92 353 76 323 3.76e-43 153
MS.gene064860.t1 MTR_1g013400 37.828 267 142 8 92 353 76 323 3.76e-43 153
MS.gene064860.t1 MTR_3g105730 37.828 267 142 8 92 353 33 280 8.55e-43 151
MS.gene064860.t1 MTR_3g105730 39.648 227 123 5 131 353 42 258 1.13e-42 150
MS.gene064860.t1 MTR_1g050520 34.629 283 152 8 88 355 382 646 4.23e-40 150
MS.gene064860.t1 MTR_2g008850 37.008 254 134 7 106 353 1 234 8.17e-40 142
MS.gene064860.t1 MTR_5g071550 35.094 265 139 7 99 351 129 372 8.47e-40 145
MS.gene064860.t1 MTR_2g008850 36.059 269 145 8 92 353 32 280 2.28e-39 142
MS.gene064860.t1 MTR_4g094208 33.333 282 158 7 80 353 17 276 9.56e-39 140
MS.gene064860.t1 MTR_5g063940 35.039 254 139 7 106 353 1 234 3.01e-38 137
MS.gene064860.t1 MTR_3g074610 36.245 229 128 5 131 353 65 281 7.21e-38 138
MS.gene064860.t1 MTR_5g063940 35.039 254 139 7 106 353 48 281 2.05e-37 137
MS.gene064860.t1 MTR_6g081850 33.333 330 175 12 54 356 10 321 9.01e-37 136
MS.gene064860.t1 MTR_3g091060 36.364 231 131 6 132 357 125 344 4.07e-36 135
MS.gene064860.t1 MTR_1g014190 27.987 318 163 8 92 353 22 329 4.58e-36 135
MS.gene064860.t1 MTR_1g014190 27.987 318 163 8 92 353 60 367 1.17e-35 135
MS.gene064860.t1 MTR_3g464700 36.161 224 120 6 99 316 93 299 2.69e-35 132
MS.gene064860.t1 MTR_3g464650 32.950 261 150 7 99 351 69 312 6.36e-35 131
MS.gene064860.t1 MTR_3g105880 28.302 318 162 8 92 353 22 329 2.96e-34 130
MS.gene064860.t1 MTR_4g125810 29.296 355 181 11 38 351 176 501 2.85e-33 130
MS.gene064860.t1 MTR_8g463130 35.371 229 130 7 131 353 65 281 6.42e-33 125
MS.gene064860.t1 MTR_8g463130 35.371 229 130 7 131 353 37 253 7.25e-33 124
MS.gene064860.t1 MTR_5g071550 35.683 227 115 6 99 315 129 334 9.01e-33 126
MS.gene064860.t1 MTR_4g007440 27.673 318 165 7 91 353 21 328 2.33e-32 125
MS.gene064860.t1 MTR_2g078760 35.776 232 121 8 131 351 37 251 5.74e-32 121
MS.gene064860.t1 MTR_3g105880 28.214 280 140 6 92 320 22 291 6.46e-32 123
MS.gene064860.t1 MTR_2g078760 35.776 232 121 8 131 351 116 330 2.04e-31 122
MS.gene064860.t1 MTR_1g015110 33.588 262 130 9 132 355 290 545 3.07e-31 125
MS.gene064860.t1 MTR_2g040500 30.351 313 149 10 101 351 228 533 6.77e-30 121
MS.gene064860.t1 MTR_3g104710 34.884 258 124 9 132 351 286 537 1.47e-29 120
MS.gene064860.t1 MTR_3g491830 28.402 338 180 10 54 350 30 346 1.93e-29 117
MS.gene064860.t1 MTR_4g094542 31.878 229 137 6 131 353 149 364 1.36e-28 115
MS.gene064860.t1 MTR_1g028300 33.213 277 152 9 95 351 114 377 3.79e-27 111
MS.gene064860.t1 MTR_3g068200 32.308 260 133 9 129 351 120 373 2.35e-26 109
MS.gene064860.t1 MTR_3g115900 90.141 71 5 1 1 71 9 77 4.00e-26 100
MS.gene064860.t1 MTR_8g102550 29.524 315 177 9 75 366 108 400 4.22e-26 108
MS.gene064860.t1 MTR_5g009370 33.473 239 130 8 101 323 60 285 8.52e-25 103
MS.gene064860.t1 MTR_2g078760 34.759 187 98 7 131 306 116 289 1.10e-22 97.1
MS.gene064860.t1 MTR_1g067210 30.000 290 136 8 122 351 66 348 2.45e-22 97.8
MS.gene064860.t1 MTR_7g100240 28.322 286 136 9 130 354 69 346 2.97e-21 94.4
MS.gene064860.t1 MTR_3g032700 30.000 230 112 9 132 318 68 291 3.05e-21 95.1
MS.gene064860.t1 MTR_5g080680 32.353 204 114 5 132 317 132 329 6.75e-21 93.6
MS.gene064860.t1 MTR_1g116260 28.028 289 141 9 130 358 78 359 7.23e-21 93.6
MS.gene064860.t1 MTR_3g032660 29.310 232 115 9 130 318 66 291 1.04e-20 93.6
MS.gene064860.t1 MTR_4g118340 29.008 262 135 10 132 351 86 338 1.42e-20 92.8
MS.gene064860.t1 MTR_3g105730 40.336 119 70 1 131 248 64 182 2.21e-20 89.4
MS.gene064860.t1 MTR_7g090530 27.922 308 127 14 132 364 69 356 1.62e-19 90.1
MS.gene064860.t1 MTR_5g071550 36.184 152 76 4 99 244 129 265 1.88e-19 88.2
MS.gene064860.t1 MTR_7g090550 28.736 261 131 12 132 345 70 322 3.54e-19 89.0
MS.gene064860.t1 MTR_2g033910 26.471 306 157 10 130 373 73 372 3.61e-19 88.6
MS.gene064860.t1 MTR_0015s0140 28.049 246 134 8 130 338 77 316 2.02e-18 86.3
MS.gene064860.t1 MTR_8g074930 26.299 308 147 12 130 369 77 372 2.75e-18 86.3
MS.gene064860.t1 MTR_2g020970 29.181 281 155 11 132 375 87 360 3.43e-18 85.5
MS.gene064860.t1 MTR_4g120410 28.467 274 146 9 132 360 91 359 4.03e-18 85.1
MS.gene064860.t1 MTR_7g080170 34.545 165 84 4 168 313 74 233 5.28e-18 85.1
MS.gene064860.t1 MTR_1g016620 30.702 228 112 8 130 316 66 288 6.61e-18 84.3
MS.gene064860.t1 MTR_2g020970 29.961 257 139 9 132 351 87 339 1.24e-17 84.3
MS.gene064860.t1 MTR_7g080170 34.545 165 84 4 168 313 182 341 1.54e-17 84.3
MS.gene064860.t1 MTR_6g087000 26.038 265 142 8 132 351 124 379 3.24e-17 84.3
MS.gene064860.t1 MTR_6g087000 26.038 265 142 8 132 351 124 379 3.33e-17 84.0
MS.gene064860.t1 MTR_2g435550 30.000 280 132 13 134 361 94 361 4.45e-17 82.4
MS.gene064860.t1 MTR_2g435550 30.000 280 132 13 134 361 80 347 5.14e-17 82.0
MS.gene064860.t1 MTR_7g081020 26.897 290 147 9 130 360 74 357 6.33e-17 82.0
MS.gene064860.t1 MTR_1g112840 26.014 296 163 9 130 369 79 374 1.54e-16 80.9
MS.gene064860.t1 MTR_1g106855 28.873 284 136 14 129 351 57 335 1.65e-16 80.9
MS.gene064860.t1 MTR_1g106855 31.064 235 112 11 129 318 57 286 3.87e-16 78.6
MS.gene064860.t1 MTR_2g435550 32.743 226 103 11 134 316 94 313 1.00e-15 78.6
MS.gene064860.t1 MTR_7g021530 32.749 171 87 6 169 316 113 278 3.67e-15 76.6
MS.gene064860.t1 MTR_7g021530 32.558 172 84 6 169 315 163 327 1.29e-14 75.1
MS.gene064860.t1 MTR_7g081020 27.848 237 124 9 130 327 74 302 1.37e-14 74.3
MS.gene064860.t1 MTR_7g021530 32.558 172 84 6 169 315 204 368 1.89e-14 75.1
MS.gene064860.t1 MTR_3g032590 32.278 158 73 7 192 318 143 297 4.33e-14 73.9
MS.gene064860.t1 MTR_2g090190 27.517 298 136 13 82 315 41 322 6.50e-14 73.2
MS.gene064860.t1 MTR_4g113480 24.803 254 142 8 132 347 74 316 6.52e-14 73.6
MS.gene064860.t1 MTR_7g060770 24.597 248 143 6 131 336 262 507 6.89e-14 73.6
MS.gene064860.t1 MTR_1g110210 27.206 272 146 14 131 372 67 316 1.30e-13 71.6
MS.gene064860.t1 MTR_4g037470 27.698 278 130 12 95 315 66 329 2.14e-13 71.6
MS.gene064860.t1 MTR_8g074930 28.205 234 104 9 192 369 35 260 2.26e-13 70.5
MS.gene064860.t1 MTR_4g013295 26.596 282 139 13 132 357 78 347 3.16e-13 70.9
MS.gene064860.t1 MTR_4g037470 28.750 240 111 10 132 316 105 339 4.06e-13 70.9
MS.gene064860.t1 MTR_5g005810 27.309 249 155 9 127 353 327 571 4.50e-13 70.9
MS.gene064860.t1 MTR_0015s0140 29.545 176 89 6 192 338 93 262 5.71e-13 69.7
MS.gene064860.t1 MTR_1g083690 31.383 188 95 6 191 353 172 350 6.22e-13 69.7
MS.gene064860.t1 MTR_5g080680 32.237 152 85 4 132 265 132 283 1.38e-12 68.2
MS.gene064860.t1 MTR_4g094208 29.070 172 107 4 80 248 17 176 3.45e-12 65.9
MS.gene064860.t1 MTR_2g078760 33.065 124 70 4 131 248 116 232 9.50e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064860.t1 AT2G33700 70.725 386 101 6 3 385 1 377 0.0 550
MS.gene064860.t1 AT3G51470 65.730 356 107 3 29 384 18 358 1.49e-169 478
MS.gene064860.t1 AT3G51470 70.740 311 86 1 74 384 9 314 3.02e-164 463
MS.gene064860.t1 AT2G25620 52.450 347 151 5 46 385 49 388 1.59e-117 347
MS.gene064860.t1 AT2G25620 52.450 347 151 5 46 385 49 388 1.59e-117 347
MS.gene064860.t1 AT3G62260 47.765 358 165 4 50 385 26 383 5.05e-109 325
MS.gene064860.t1 AT3G62260 47.899 357 165 4 50 385 26 382 9.17e-109 324
MS.gene064860.t1 AT1G48040 46.628 341 155 4 70 384 41 380 3.88e-101 305
MS.gene064860.t1 AT3G62260 51.877 293 128 3 106 385 1 293 2.97e-100 299
MS.gene064860.t1 AT3G17250 49.062 320 141 8 83 385 107 421 2.20e-97 296
MS.gene064860.t1 AT5G10740 39.326 267 138 8 92 353 32 279 8.92e-47 163
MS.gene064860.t1 AT5G10740 39.326 267 138 8 92 353 32 279 8.92e-47 163
MS.gene064860.t1 AT4G31750 37.288 295 155 9 72 361 18 287 9.89e-45 157
MS.gene064860.t1 AT4G31750 37.288 295 155 9 72 361 18 287 9.89e-45 157
MS.gene064860.t1 AT4G31750 37.288 295 155 9 72 361 18 287 1.26e-44 156
MS.gene064860.t1 AT1G43900 37.407 270 138 10 92 353 122 368 3.63e-43 154
MS.gene064860.t1 AT5G24940 40.708 226 120 6 132 353 64 279 4.95e-43 155
MS.gene064860.t1 AT1G78200 36.471 255 137 7 106 353 1 237 1.57e-41 146
MS.gene064860.t1 AT1G78200 36.471 255 137 7 106 353 1 237 1.57e-41 146
MS.gene064860.t1 AT5G53140 33.835 266 154 6 95 356 103 350 3.03e-41 150
MS.gene064860.t1 AT5G53140 33.835 266 154 6 95 356 103 350 3.03e-41 150
MS.gene064860.t1 AT1G78200 36.471 255 137 7 106 353 46 282 1.39e-40 145
MS.gene064860.t1 AT1G78200 36.471 255 137 7 106 353 46 282 1.39e-40 145
MS.gene064860.t1 AT1G78200 36.471 255 137 7 106 353 46 282 1.39e-40 145
MS.gene064860.t1 AT2G40860 33.553 304 168 8 67 355 268 552 1.65e-39 148
MS.gene064860.t1 AT2G40860 33.553 304 168 8 67 355 366 650 1.72e-39 149
MS.gene064860.t1 AT1G67820 37.247 247 127 8 95 332 86 313 5.43e-39 144
MS.gene064860.t1 AT1G67820 37.247 247 127 8 95 332 122 349 6.53e-39 144
MS.gene064860.t1 AT1G22280 34.766 256 137 7 106 353 47 280 1.77e-37 137
MS.gene064860.t1 AT4G31860 27.879 330 172 6 92 365 22 341 2.07e-37 139
MS.gene064860.t1 AT1G34750 34.118 255 136 7 106 351 48 279 2.64e-37 136
MS.gene064860.t1 AT1G34750 34.118 255 136 7 106 351 48 279 2.64e-37 136
MS.gene064860.t1 AT1G34750 34.118 255 136 7 106 351 48 279 2.64e-37 136
MS.gene064860.t1 AT2G20630 34.498 229 132 5 131 353 62 278 6.56e-37 135
MS.gene064860.t1 AT2G20630 34.498 229 132 5 131 353 62 278 1.33e-36 134
MS.gene064860.t1 AT2G25070 28.313 332 172 6 92 367 22 343 3.43e-36 135
MS.gene064860.t1 AT2G25070 28.313 332 172 6 92 367 22 343 3.43e-36 135
MS.gene064860.t1 AT2G30020 35.496 262 144 8 99 351 145 390 4.96e-36 135
MS.gene064860.t1 AT1G18030 32.372 312 163 10 76 353 51 348 5.29e-36 135
MS.gene064860.t1 AT1G22280 35.115 262 134 9 106 353 47 286 2.68e-35 131
MS.gene064860.t1 AT4G28400 34.498 229 132 6 131 353 44 260 8.02e-35 129
MS.gene064860.t1 AT4G28400 34.498 229 132 6 131 353 66 282 1.77e-34 129
MS.gene064860.t1 AT2G40860 32.180 289 162 8 67 340 366 635 8.13e-34 133
MS.gene064860.t1 AT1G07160 33.712 264 147 8 99 351 128 374 1.10e-33 129
MS.gene064860.t1 AT2G40180 33.208 265 150 7 99 351 134 383 3.00e-32 125
MS.gene064860.t1 AT4G31860 28.214 280 140 5 92 320 22 291 6.46e-32 122
MS.gene064860.t1 AT3G15260 34.649 228 131 6 132 353 73 288 8.79e-31 119
MS.gene064860.t1 AT3G15260 34.649 228 131 6 132 353 73 288 8.79e-31 119
MS.gene064860.t1 AT5G57050 29.752 363 177 14 56 351 58 409 1.13e-30 122
MS.gene064860.t1 AT5G57050 30.556 324 164 13 78 351 57 369 1.17e-29 118
MS.gene064860.t1 AT4G26080 30.145 345 171 15 68 355 93 424 1.67e-29 119
MS.gene064860.t1 AT4G31860 28.030 264 129 5 92 304 22 275 1.15e-28 113
MS.gene064860.t1 AT1G18030 31.439 264 134 9 76 306 51 300 3.71e-28 112
MS.gene064860.t1 AT2G29380 31.930 285 149 11 101 351 85 358 1.28e-27 112
MS.gene064860.t1 AT1G07430 33.171 205 112 5 132 317 157 355 2.32e-26 110
MS.gene064860.t1 AT2G34740 30.870 230 139 7 131 353 118 334 3.70e-26 107
MS.gene064860.t1 AT1G72770 29.762 336 160 12 79 351 177 499 8.63e-26 108
MS.gene064860.t1 AT1G72770 29.762 336 160 12 79 351 177 499 8.63e-26 108
MS.gene064860.t1 AT1G72770 29.762 336 160 12 79 351 177 499 8.63e-26 108
MS.gene064860.t1 AT1G34750 33.516 182 107 4 131 306 65 238 5.27e-25 102
MS.gene064860.t1 AT5G51760 30.714 280 134 8 125 351 107 379 1.16e-24 104
MS.gene064860.t1 AT4G27800 27.869 305 168 7 86 350 53 345 1.40e-24 104
MS.gene064860.t1 AT5G51760 30.714 280 134 8 125 351 137 409 1.43e-24 104
MS.gene064860.t1 AT4G28400 32.418 182 109 4 131 306 66 239 7.49e-24 99.8
MS.gene064860.t1 AT2G40860 31.301 246 138 7 67 297 366 595 2.07e-23 102
MS.gene064860.t1 AT3G11410 29.259 270 152 7 75 317 86 343 2.21e-23 100
MS.gene064860.t1 AT5G02760 29.553 291 142 10 124 357 64 348 2.76e-23 100
MS.gene064860.t1 AT1G17550 28.521 284 145 7 119 351 223 499 4.14e-23 101
MS.gene064860.t1 AT1G17550 28.521 284 145 7 119 351 223 499 4.14e-23 101
MS.gene064860.t1 AT5G59220 30.901 233 137 7 101 317 119 343 1.68e-22 98.6
MS.gene064860.t1 AT3G06270 28.137 263 136 8 132 351 88 340 1.68e-21 95.1
MS.gene064860.t1 AT4G27800 27.304 293 161 7 86 338 53 333 1.01e-20 92.4
MS.gene064860.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.16e-20 92.4
MS.gene064860.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.16e-20 92.4
MS.gene064860.t1 AT3G16800 30.818 318 155 14 81 355 55 350 1.16e-20 92.4
MS.gene064860.t1 AT3G17090 29.010 293 143 11 130 363 82 368 1.37e-20 92.8
MS.gene064860.t1 AT4G27800 27.305 282 153 7 86 327 53 322 8.07e-20 89.7
MS.gene064860.t1 AT2G34740 31.016 187 113 6 131 310 114 291 1.05e-19 89.4
MS.gene064860.t1 AT3G16800 34.419 215 105 8 168 355 50 255 1.07e-19 88.2
MS.gene064860.t1 AT3G16800 34.419 215 105 8 168 355 50 255 1.07e-19 88.2
MS.gene064860.t1 AT2G34740 31.016 187 113 6 131 310 132 309 1.15e-19 89.4
MS.gene064860.t1 AT2G20050 27.757 263 137 8 132 351 143 395 2.57e-19 90.5
MS.gene064860.t1 AT2G20050 27.757 263 137 8 132 351 143 395 2.64e-19 90.5
MS.gene064860.t1 AT4G08260 31.839 223 116 8 131 351 18 206 4.81e-19 85.1
MS.gene064860.t1 AT3G51370 25.753 299 157 8 130 369 77 369 8.82e-19 87.4
MS.gene064860.t1 AT3G51370 25.753 299 157 8 130 369 77 369 8.82e-19 87.4
MS.gene064860.t1 AT5G06750 28.514 249 133 8 130 338 80 323 9.31e-19 87.4
MS.gene064860.t1 AT5G06750 28.514 249 133 8 130 338 80 323 9.31e-19 87.4
MS.gene064860.t1 AT5G26010 28.620 297 162 11 89 349 38 320 3.45e-18 85.1
MS.gene064860.t1 AT3G27140 31.624 234 101 8 131 362 18 194 4.92e-18 83.2
MS.gene064860.t1 AT3G17090 29.289 239 126 9 130 331 82 314 5.15e-18 84.3
MS.gene064860.t1 AT4G38520 26.298 289 150 8 130 360 79 362 5.60e-18 85.5
MS.gene064860.t1 AT4G38520 26.298 289 150 8 130 360 79 362 5.60e-18 85.5
MS.gene064860.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.15e-17 84.7
MS.gene064860.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.15e-17 84.7
MS.gene064860.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.15e-17 84.7
MS.gene064860.t1 AT1G68410 28.053 303 167 13 90 366 37 314 1.15e-17 84.7
MS.gene064860.t1 AT5G57050 29.688 256 130 10 56 266 58 308 1.66e-17 82.8
MS.gene064860.t1 AT3G12620 28.571 294 137 10 130 360 81 364 1.85e-17 83.6
MS.gene064860.t1 AT3G12620 28.571 294 137 10 130 360 81 364 1.85e-17 83.6
MS.gene064860.t1 AT5G19280 31.496 254 139 11 127 353 332 577 3.10e-16 80.9
MS.gene064860.t1 AT4G32950 29.279 222 111 8 130 318 70 278 8.68e-16 78.2
MS.gene064860.t1 AT3G55050 26.950 282 139 9 130 351 82 356 1.07e-15 78.6
MS.gene064860.t1 AT3G55050 26.950 282 139 9 130 351 82 356 1.07e-15 78.6
MS.gene064860.t1 AT3G02750 32.934 167 88 5 168 315 191 352 4.00e-15 77.0
MS.gene064860.t1 AT3G02750 32.934 167 88 5 168 315 191 352 4.00e-15 77.0
MS.gene064860.t1 AT5G66080 25.166 302 158 10 130 369 80 375 5.27e-15 76.3
MS.gene064860.t1 AT5G36250 28.986 207 115 6 154 339 168 363 5.74e-15 76.6
MS.gene064860.t1 AT5G27930 29.057 265 135 11 132 349 92 350 7.80e-15 75.9
MS.gene064860.t1 AT5G27930 29.057 265 135 11 132 349 92 350 7.80e-15 75.9
MS.gene064860.t1 AT1G47380 27.203 261 150 10 131 367 63 307 9.87e-15 75.9
MS.gene064860.t1 AT5G19280 30.303 264 139 12 127 353 332 587 2.03e-14 75.1
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 151 352 2.79e-14 74.3
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 151 352 2.79e-14 74.3
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.24e-14 73.9
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.24e-14 73.9
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.24e-14 73.9
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 111 312 3.24e-14 73.9
MS.gene064860.t1 AT1G09160 25.703 249 145 10 131 355 67 299 3.93e-14 73.9
MS.gene064860.t1 AT1G09160 25.703 249 145 10 131 355 67 299 3.93e-14 73.9
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 217 418 4.43e-14 73.9
MS.gene064860.t1 AT1G79630 30.986 213 110 8 191 377 221 422 4.54e-14 73.9
MS.gene064860.t1 AT3G51370 27.074 229 110 6 192 369 62 284 4.89e-14 72.4
MS.gene064860.t1 AT1G16220 34.043 141 70 4 191 313 198 333 6.18e-14 73.6
MS.gene064860.t1 AT1G22280 32.877 146 83 4 106 248 47 180 4.23e-13 68.2
MS.gene064860.t1 AT4G33920 25.079 315 151 12 113 359 47 344 5.01e-13 70.5
MS.gene064860.t1 AT5G59220 30.000 180 108 6 101 264 119 296 5.12e-13 69.7
MS.gene064860.t1 AT4G03415 28.994 169 96 4 167 316 169 332 7.32e-13 70.1
MS.gene064860.t1 AT4G03415 28.994 169 96 4 167 316 169 332 7.32e-13 70.1
MS.gene064860.t1 AT4G03415 28.994 169 96 4 167 316 169 332 7.32e-13 70.1
MS.gene064860.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.17e-12 68.9
MS.gene064860.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.17e-12 68.9
MS.gene064860.t1 AT3G05640 29.150 247 125 12 132 339 93 328 1.17e-12 68.9
MS.gene064860.t1 AT1G72770 28.017 232 114 7 79 264 177 401 1.45e-12 68.9
MS.gene064860.t1 AT1G72770 28.017 232 114 7 79 264 177 401 1.45e-12 68.9
MS.gene064860.t1 AT5G01700 27.393 303 158 12 132 386 29 317 1.46e-12 68.6
MS.gene064860.t1 AT5G01700 27.393 303 158 12 132 386 78 366 2.87e-12 68.2
MS.gene064860.t1 AT5G06750 30.726 179 87 6 192 338 68 241 6.36e-12 66.2
MS.gene064860.t1 AT5G36250 27.064 218 113 7 157 339 171 377 1.10e-11 66.6
MS.gene064860.t1 AT1G03590 28.571 168 96 5 168 316 160 322 1.41e-11 66.2

Find 112 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAATACAATTTGGTTTC+TGG 0.063429 3.3:+94521917 None:intergenic
GCTTTAACTGCACTTGTATT+TGG 0.106810 3.3:-94522363 MS.gene064860:CDS
GGATGATGAATTCTTGATTA+TGG 0.180271 3.3:-94521731 MS.gene064860:CDS
CCTCTTCCCGGAGCTTTCTA+TGG 0.196448 3.3:-94523073 MS.gene064860:CDS
AGTCTTTCTGAAATACAATT+TGG 0.227111 3.3:+94521910 None:intergenic
AGTCCTCAACAATGAGTTTA+AGG 0.235742 3.3:+94522490 None:intergenic
TCGCCTTCTAGTATTGTAAT+TGG 0.239407 3.3:+94523987 None:intergenic
GATAATGATGATGACAAATT+AGG 0.274200 3.3:-94523939 MS.gene064860:CDS
TGCAGCCAGTTTCAATCTAT+TGG 0.280570 3.3:+94523839 None:intergenic
AAGAGGACCTAAACAATATA+TGG 0.314058 3.3:-94523155 MS.gene064860:CDS
ACTTCAAATGTTCCTCTTCC+CGG 0.314733 3.3:-94523085 MS.gene064860:CDS
CTTTAACTGCACTTGTATTT+GGG 0.315593 3.3:-94522362 MS.gene064860:CDS
GATTGTTATGCATGTGGATA+TGG 0.322652 3.3:-94524021 None:intergenic
CTCATTGTTCAGGTGTTTGA+TGG 0.330417 3.3:-94522555 MS.gene064860:intron
AGAAAGCCTTACTTTACTTA+AGG 0.331641 3.3:-94521482 MS.gene064860:CDS
CTCTTCCCGGAGCTTTCTAT+GGG 0.334929 3.3:-94523072 MS.gene064860:CDS
TCATCTTCCATATATTGTTT+AGG 0.337678 3.3:+94523148 None:intergenic
TCTCCCCAGATCCTCCTTCC+AGG 0.343292 3.3:-94521546 MS.gene064860:CDS
GAGTGCCGAGCCAGAGTTGC+AGG 0.350375 3.3:-94521770 MS.gene064860:CDS
TCTATCCTGGAAGGAGGATC+TGG 0.353595 3.3:+94521541 None:intergenic
GAAACTGGCTGCATCAGATT+TGG 0.357220 3.3:-94523829 MS.gene064860:intron
AGGCACGTGAAACAGATAAT+TGG 0.379392 3.3:+94521839 None:intergenic
GAAAGCCTTACTTTACTTAA+GGG 0.380886 3.3:-94521481 MS.gene064860:CDS
GATGATGAATTCTTGATTAT+GGG 0.388378 3.3:-94521730 MS.gene064860:CDS
TTATCTGTTTCACGTGCCTT+AGG 0.408033 3.3:-94521835 MS.gene064860:CDS
ATTGTATTTCAGAAAGACTA+AGG 0.408240 3.3:-94521906 MS.gene064860:CDS
AATCTTAAACCAACCACAAT+TGG 0.411304 3.3:-94523906 MS.gene064860:CDS
AATAAGATTTCCTGCAACTC+TGG 0.414668 3.3:+94521760 None:intergenic
TAGCTCCAATAGATTGAAAC+TGG 0.425800 3.3:-94523844 MS.gene064860:CDS
CAACTTCCTGATCGAAATAT+CGG 0.427335 3.3:+94523184 None:intergenic
AGTGTGGATGCAGAGGTTAC+TGG 0.429225 3.3:-94523244 MS.gene064860:CDS
TAACTCATGTGATAATTTAA+CGG 0.431939 3.3:-94521584 MS.gene064860:CDS
TGCTGTGACCATGGCAAGAA+AGG 0.436779 3.3:-94521671 MS.gene064860:CDS
TTTCACGTGCCTTAGGTGAC+TGG 0.440786 3.3:-94521828 MS.gene064860:CDS
CTCAAACTGGAAGCATGTCT+TGG 0.449022 3.3:+94523876 None:intergenic
AGATACCTCCTTCTCGAGTC+AGG 0.452138 3.3:-94521519 MS.gene064860:CDS
AACTCTCTCGAACACCTTTG+AGG 0.459406 3.3:+94521628 None:intergenic
CCTCCAATTACAATACTAGA+AGG 0.459410 3.3:-94523990 MS.gene064860:CDS
CAAAGGACAGGCAGAACCCT+TGG 0.469942 3.3:+94521792 None:intergenic
AGAAGGAGGTATCTCTATCC+TGG 0.471146 3.3:+94521528 None:intergenic
ATACACCCTTAAGTAAAGTA+AGG 0.471953 3.3:+94521476 None:intergenic
AGAGGAGATATCAAGCGAAC+TGG 0.473514 3.3:+94522395 None:intergenic
CCATAGAAAGCTCCGGGAAG+AGG 0.477635 3.3:+94523073 None:intergenic
GCTAAGGCTATGTCTCAAAC+TGG 0.485089 3.3:+94523863 None:intergenic
GTTCAGGTGTTTGATGGCCA+TGG 0.485255 3.3:-94522549 MS.gene064860:intron
TTCTTGATTATGGGCTGTGA+TGG 0.488636 3.3:-94521721 MS.gene064860:CDS
AGTTCGCTTGATATCTCCTC+TGG 0.489115 3.3:-94522393 MS.gene064860:CDS
CTATCCTGGAAGGAGGATCT+GGG 0.492994 3.3:+94521542 None:intergenic
AAACTGGAAGCATGTCTTGG+AGG 0.497115 3.3:+94523879 None:intergenic
AACATGGTAATTGCAAATGC+GGG 0.500584 3.3:-94521994 MS.gene064860:CDS
TCTTGGAGGTTTACCAATTG+TGG 0.502037 3.3:+94523893 None:intergenic
CCTTCTAGTATTGTAATTGG+AGG 0.506725 3.3:+94523990 None:intergenic
TCTCAGTTTCCAACTTGTGT+GGG 0.508801 3.3:-94522468 MS.gene064860:CDS
GTTTCCAACTTGTGTGGGGA+AGG 0.512554 3.3:-94522463 MS.gene064860:CDS
CTCTCAGTTTCCAACTTGTG+TGG 0.515279 3.3:-94522469 MS.gene064860:CDS
GGAGGTTTACCAATTGTGGT+TGG 0.517867 3.3:+94523897 None:intergenic
TGATAATTTAACGGTTATTG+TGG 0.519496 3.3:-94521575 MS.gene064860:CDS
GTTTCAATCTATTGGAGCTA+AGG 0.520235 3.3:+94523847 None:intergenic
CATCAACTCCTTTCTTGCCA+TGG 0.520543 3.3:+94521663 None:intergenic
ACGAACCCCATAGAAAGCTC+CGG 0.522866 3.3:+94523066 None:intergenic
ATTGCCTTCCCCACACAAGT+TGG 0.523655 3.3:+94522459 None:intergenic
TTTGTTCCGATATTTCGATC+AGG 0.526490 3.3:-94523190 MS.gene064860:CDS
CTTAGGTGACTGGCACATGA+AGG 0.537656 3.3:-94521818 MS.gene064860:CDS
CTTGGTGGGGTGGTATATGA+TGG 0.541375 3.3:-94521874 MS.gene064860:CDS
TTGCCATGGTCACAGCACCT+TGG 0.547224 3.3:+94521677 None:intergenic
AAAGGACAGGCAGAACCCTT+GGG 0.548931 3.3:+94521793 None:intergenic
GGGGATTGTCGAGCTGTACT+GGG 0.549473 3.3:-94521973 MS.gene064860:CDS
TCTTACAAACAAAGCAGCAT+CGG 0.551613 3.3:+94522521 None:intergenic
GATTTCCTGCAACTCTGGCT+CGG 0.555836 3.3:+94521765 None:intergenic
AACTCTGGCTCGGCACTCAA+AGG 0.558498 3.3:+94521775 None:intergenic
CTTCATGTGCCAGTCACCTA+AGG 0.565352 3.3:+94521819 None:intergenic
CTGGCACATGAAGGGTCCCA+AGG 0.566388 3.3:-94521809 MS.gene064860:CDS
CGAGCTGTACTGGGAAGGCG+AGG 0.567777 3.3:-94521964 MS.gene064860:CDS
TCAGGAAGTTGTGCTGAAAG+AGG 0.568890 3.3:-94523172 MS.gene064860:CDS
CTCAGTTTCCAACTTGTGTG+GGG 0.570395 3.3:-94522467 MS.gene064860:CDS
CGAACCCCATAGAAAGCTCC+GGG 0.570787 3.3:+94523067 None:intergenic
AATCAAGAATTCATCATCCT+CGG 0.573522 3.3:+94521735 None:intergenic
TTAGGTGACTGGCACATGAA+GGG 0.574484 3.3:-94521817 MS.gene064860:CDS
TCAAAGGTGTTCGAGAGAGT+TGG 0.583518 3.3:-94521626 MS.gene064860:CDS
TTATGGGCTGTGATGGCCTG+TGG 0.583612 3.3:-94521714 MS.gene064860:CDS
TGGCTCGGCACTCAAAGGAC+AGG 0.584284 3.3:+94521780 None:intergenic
GAACATGGTAATTGCAAATG+CGG 0.589776 3.3:-94521995 MS.gene064860:CDS
GTATATGATGGATACTTGAA+TGG 0.591854 3.3:-94521862 MS.gene064860:CDS
TTTCATCATTGACAGGAACA+TGG 0.594549 3.3:-94522010 MS.gene064860:intron
TATGGGCTGTGATGGCCTGT+GGG 0.595224 3.3:-94521713 MS.gene064860:CDS
AAGCAGCATCGGTTCCTCCA+TGG 0.595456 3.3:+94522532 None:intergenic
ATACTCCTCCTGACTCGAGA+AGG 0.595732 3.3:+94521511 None:intergenic
TAACCAAGGTGCTGTGACCA+TGG 0.601204 3.3:-94521680 MS.gene064860:CDS
TAACTGCACTTGTATTTGGG+AGG 0.603179 3.3:-94522359 MS.gene064860:intron
TGGCACATGAAGGGTCCCAA+GGG 0.607482 3.3:-94521808 MS.gene064860:CDS
ATTGTCGAGCTGTACTGGGA+AGG 0.608398 3.3:-94521969 MS.gene064860:CDS
CATCCTTAAACTCATTGTTG+AGG 0.608747 3.3:-94522493 MS.gene064860:CDS
GGTTACTCATTACATCCCAC+AGG 0.609793 3.3:+94521698 None:intergenic
GGAAGAGATTGTTATGCATG+TGG 0.615504 3.3:-94524027 None:intergenic
TTCGAGAGAGTTGGTCAGAG+AGG 0.616595 3.3:-94521617 MS.gene064860:CDS
TACAAGTGCAGTTAAAGCGG+TGG 0.621319 3.3:+94522368 None:intergenic
GATGATCTTACTCAACACAT+AGG 0.621620 3.3:-94523112 MS.gene064860:CDS
CTCCTCCTGACTCGAGAAGG+AGG 0.623337 3.3:+94521514 None:intergenic
GGAGGTATCTCTATCCTGGA+AGG 0.623574 3.3:+94521532 None:intergenic
AGTTAAAGCGGTGGTGCCAG+AGG 0.623929 3.3:+94522377 None:intergenic
ACATGGTAATTGCAAATGCG+GGG 0.624191 3.3:-94521993 MS.gene064860:CDS
TGATACATAATGATCCTCAA+AGG 0.634106 3.3:-94521642 MS.gene064860:CDS
AAATACAAGTGCAGTTAAAG+CGG 0.641797 3.3:+94522365 None:intergenic
GAGCTGTACTGGGAAGGCGA+GGG 0.651369 3.3:-94521963 MS.gene064860:CDS
TACCTCCTTCTCGAGTCAGG+AGG 0.654982 3.3:-94521516 MS.gene064860:CDS
CATGGTAATTGCAAATGCGG+GGG 0.660694 3.3:-94521992 MS.gene064860:CDS
GCAGGAAATCTTATTGACCG+AGG 0.667282 3.3:-94521752 MS.gene064860:CDS
TATCCTGGAAGGAGGATCTG+GGG 0.673089 3.3:+94521543 None:intergenic
GGTATCTCTATCCTGGAAGG+AGG 0.683404 3.3:+94521535 None:intergenic
CAGGTGTTTGATGGCCATGG+AGG 0.686582 3.3:-94522546 MS.gene064860:CDS
TCTTCCCGGAGCTTTCTATG+GGG 0.694705 3.3:-94523071 MS.gene064860:intron
TGGGATGTAATGAGTAACCA+AGG 0.735826 3.3:-94521694 MS.gene064860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATATTTTGACATTT+TGG - chr3.3:94521734-94521753 MS.gene064860:CDS 10.0%
!!! CATAAAATATATTGTTTTAA+TGG - chr3.3:94522818-94522837 MS.gene064860:intron 10.0%
!! AAAATTAATGAAAAGAATCA+TGG + chr3.3:94523167-94523186 None:intergenic 15.0%
!! AATGTTTGGAAACAATATAA+TGG - chr3.3:94523274-94523293 MS.gene064860:intron 20.0%
!! AGTAAAGTATAAAGTAGTAT+TGG + chr3.3:94522145-94522164 None:intergenic 20.0%
!! ATTGGTTAAGGAATAAAAAA+AGG - chr3.3:94521902-94521921 MS.gene064860:CDS 20.0%
!! GATGAAATTTCACAAATTTA+GGG + chr3.3:94523456-94523475 None:intergenic 20.0%
!! TAAAAAAAGGTAAGTTTGTA+TGG - chr3.3:94521915-94521934 MS.gene064860:CDS 20.0%
!! TAACATGCAAACAAAAATAA+AGG + chr3.3:94522877-94522896 None:intergenic 20.0%
!! TAACTCATGTGATAATTTAA+CGG - chr3.3:94523895-94523914 MS.gene064860:CDS 20.0%
!! TGATGAAATTTCACAAATTT+AGG + chr3.3:94523457-94523476 None:intergenic 20.0%
!!! AGATCCTATTATTTTTAAGT+GGG - chr3.3:94523228-94523247 MS.gene064860:CDS 20.0%
!!! CATTAATTTTAGCAAGTTTT+AGG - chr3.3:94523177-94523196 MS.gene064860:CDS 20.0%
!!! TAAGATAAACTTTCCTTTTA+TGG - chr3.3:94521972-94521991 MS.gene064860:CDS 20.0%
!!! TAGATCCTATTATTTTTAAG+TGG - chr3.3:94523227-94523246 MS.gene064860:CDS 20.0%
! AAACAACCAATAAAATCTGA+AGG + chr3.3:94523205-94523224 None:intergenic 25.0%
! AACACCCACTTAAAAATAAT+AGG + chr3.3:94523235-94523254 None:intergenic 25.0%
! ATTGTATTTCAGAAAGACTA+AGG - chr3.3:94523573-94523592 MS.gene064860:intron 25.0%
! CATTTGTTTACTTTGCTTAA+AGG - chr3.3:94522547-94522566 MS.gene064860:intron 25.0%
! CTAACTAGTAATCTAAACAT+TGG + chr3.3:94522007-94522026 None:intergenic 25.0%
! GATGATGAATTCTTGATTAT+GGG - chr3.3:94523749-94523768 MS.gene064860:intron 25.0%
! TCATCTTCCATATATTGTTT+AGG + chr3.3:94522334-94522353 None:intergenic 25.0%
! TGATAATTTAACGGTTATTG+TGG - chr3.3:94523904-94523923 MS.gene064860:CDS 25.0%
! TTCTGATGGAAATTAAACAT+CGG + chr3.3:94522732-94522751 None:intergenic 25.0%
! TTGGTTAATGAATCCATAAA+AGG + chr3.3:94521988-94522007 None:intergenic 25.0%
!! GATAATGATGATGACAAATT+AGG - chr3.3:94521540-94521559 MS.gene064860:CDS 25.0%
!! TTTTTATTCCTTAACCAATG+TGG + chr3.3:94521901-94521920 None:intergenic 25.0%
!!! AGTCTTTCTGAAATACAATT+TGG + chr3.3:94523572-94523591 None:intergenic 25.0%
AAATACAAGTGCAGTTAAAG+CGG + chr3.3:94523117-94523136 None:intergenic 30.0%
AAGAGGACCTAAACAATATA+TGG - chr3.3:94522324-94522343 MS.gene064860:intron 30.0%
AATCAAGAATTCATCATCCT+CGG + chr3.3:94523747-94523766 None:intergenic 30.0%
AATCATGGAATCATAATGCA+AGG + chr3.3:94523152-94523171 None:intergenic 30.0%
AATCTTAAACCAACCACAAT+TGG - chr3.3:94521573-94521592 MS.gene064860:CDS 30.0%
AGAAAGCCTTACTTTACTTA+AGG - chr3.3:94523997-94524016 MS.gene064860:CDS 30.0%
AGACTAAGGATTGAAAAACT+TGG - chr3.3:94523587-94523606 MS.gene064860:intron 30.0%
ATACACCCTTAAGTAAAGTA+AGG + chr3.3:94524006-94524025 None:intergenic 30.0%
CATGCAAACAAAAATAAAGG+TGG + chr3.3:94522874-94522893 None:intergenic 30.0%
CTGTTAAGAATAGTAATGCA+TGG + chr3.3:94522701-94522720 None:intergenic 30.0%
CTTTAACTGCACTTGTATTT+GGG - chr3.3:94523117-94523136 MS.gene064860:CDS 30.0%
GAAAGCCTTACTTTACTTAA+GGG - chr3.3:94523998-94524017 MS.gene064860:CDS 30.0%
GATTAGGACAAATGAGTAAT+AGG - chr3.3:94522767-94522786 MS.gene064860:intron 30.0%
GGATGATGAATTCTTGATTA+TGG - chr3.3:94523748-94523767 MS.gene064860:intron 30.0%
GTATTTATGTCTCATCTCAT+TGG - chr3.3:94523350-94523369 MS.gene064860:intron 30.0%
TAAGGATTGAAAAACTTGGT+GGG - chr3.3:94523591-94523610 MS.gene064860:intron 30.0%
TACAACGAATATGACAACAT+AGG + chr3.3:94522169-94522188 None:intergenic 30.0%
TACTATTCTTAACAGAATCG+TGG - chr3.3:94522706-94522725 MS.gene064860:intron 30.0%
TCATATTCGTTGTAAAGCTT+AGG - chr3.3:94522175-94522194 MS.gene064860:intron 30.0%
TGATACATAATGATCCTCAA+AGG - chr3.3:94523837-94523856 MS.gene064860:CDS 30.0%
TGTGAAATTTCATCATTGAC+AGG - chr3.3:94523462-94523481 MS.gene064860:intron 30.0%
TTCTTCAACCGTAATTTATC+CGG - chr3.3:94523304-94523323 MS.gene064860:intron 30.0%
! CTGAAATACAATTTGGTTTC+TGG + chr3.3:94523565-94523584 None:intergenic 30.0%
! TGTTTTTCCCGGATAAATTA+CGG + chr3.3:94523315-94523334 None:intergenic 30.0%
!! GTATATGATGGATACTTGAA+TGG - chr3.3:94523617-94523636 MS.gene064860:intron 30.0%
AAACACCTGAACAATGAGTA+TGG + chr3.3:94522922-94522941 None:intergenic 35.0%
AAATGAGTAATAGGCTAGAG+AGG - chr3.3:94522776-94522795 MS.gene064860:intron 35.0%
AACACCTGAACAATGAGTAT+GGG + chr3.3:94522921-94522940 None:intergenic 35.0%
AACATGGTAATTGCAAATGC+GGG - chr3.3:94523485-94523504 MS.gene064860:intron 35.0%
AATAAGATTTCCTGCAACTC+TGG + chr3.3:94523722-94523741 None:intergenic 35.0%
AATAGTAATGCATGGAGAAG+AGG + chr3.3:94522693-94522712 None:intergenic 35.0%
AGTCCTCAACAATGAGTTTA+AGG + chr3.3:94522992-94523011 None:intergenic 35.0%
AGTTGACATTGCTGAAGATT+AGG - chr3.3:94522751-94522770 MS.gene064860:intron 35.0%
ATATGCAGTACGATCAATGA+TGG + chr3.3:94522629-94522648 None:intergenic 35.0%
ATGGGAAATACAAAGAGTAG+TGG + chr3.3:94522610-94522629 None:intergenic 35.0%
ATGTGTGTATCAGTTTAGCA+AGG + chr3.3:94522093-94522112 None:intergenic 35.0%
CAACTTCCTGATCGAAATAT+CGG + chr3.3:94522298-94522317 None:intergenic 35.0%
CATCCTTAAACTCATTGTTG+AGG - chr3.3:94522986-94523005 MS.gene064860:intron 35.0%
CCTCCAATTACAATACTAGA+AGG - chr3.3:94521489-94521508 MS.gene064860:CDS 35.0%
CCTTCTAGTATTGTAATTGG+AGG + chr3.3:94521492-94521511 None:intergenic 35.0%
CGGGAAAAACATAAGATTCT+GGG - chr3.3:94523324-94523343 MS.gene064860:intron 35.0%
CTAAGGATTGAAAAACTTGG+TGG - chr3.3:94523590-94523609 MS.gene064860:intron 35.0%
GAACATGGTAATTGCAAATG+CGG - chr3.3:94523484-94523503 MS.gene064860:intron 35.0%
GATGATCTTACTCAACACAT+AGG - chr3.3:94522367-94522386 MS.gene064860:CDS 35.0%
GCTTTAACTGCACTTGTATT+TGG - chr3.3:94523116-94523135 MS.gene064860:CDS 35.0%
GTTTCAATCTATTGGAGCTA+AGG + chr3.3:94521635-94521654 None:intergenic 35.0%
TAGCTCCAATAGATTGAAAC+TGG - chr3.3:94521635-94521654 MS.gene064860:CDS 35.0%
TATGCAGTACGATCAATGAT+GGG + chr3.3:94522628-94522647 None:intergenic 35.0%
TCGCCTTCTAGTATTGTAAT+TGG + chr3.3:94521495-94521514 None:intergenic 35.0%
TCTTACAAACAAAGCAGCAT+CGG + chr3.3:94522961-94522980 None:intergenic 35.0%
TCTTCAACCGTAATTTATCC+GGG - chr3.3:94523305-94523324 MS.gene064860:intron 35.0%
TTTAAGTGGGTGTTAGAACA+CGG - chr3.3:94523241-94523260 MS.gene064860:CDS 35.0%
TTTCATCATTGACAGGAACA+TGG - chr3.3:94523469-94523488 MS.gene064860:intron 35.0%
TTTGTTCCGATATTTCGATC+AGG - chr3.3:94522289-94522308 MS.gene064860:intron 35.0%
! AACAAGTTCCACATTGGTTA+AGG - chr3.3:94521890-94521909 MS.gene064860:CDS 35.0%
! AAGGATTGAAAAACTTGGTG+GGG - chr3.3:94523592-94523611 MS.gene064860:intron 35.0%
! CCAGAATCTTATGTTTTTCC+CGG + chr3.3:94523326-94523345 None:intergenic 35.0%
! TAGGTGCCTTCAGATTTTAT+TGG - chr3.3:94523196-94523215 MS.gene064860:CDS 35.0%
!! CACAAAGCTTGTTATCTAAC+AGG + chr3.3:94522523-94522542 None:intergenic 35.0%
!!! CTCTCTCTTTTTTAAGAGTG+TGG - chr3.3:94522219-94522238 MS.gene064860:intron 35.0%
ACATGGTAATTGCAAATGCG+GGG - chr3.3:94523486-94523505 MS.gene064860:intron 40.0%
ACTTCAAATGTTCCTCTTCC+CGG - chr3.3:94522394-94522413 MS.gene064860:CDS 40.0%
AGGCACGTGAAACAGATAAT+TGG + chr3.3:94523643-94523662 None:intergenic 40.0%
ATGTCTCATCTCATTGGAGA+TGG - chr3.3:94523356-94523375 MS.gene064860:intron 40.0%
CCAAGTAACAAGTTCCACAT+TGG - chr3.3:94521884-94521903 MS.gene064860:CDS 40.0%
CCGGGAAAAACATAAGATTC+TGG - chr3.3:94523323-94523342 MS.gene064860:intron 40.0%
CTCATTGTTCAGGTGTTTGA+TGG - chr3.3:94522924-94522943 MS.gene064860:intron 40.0%
GTAACCCATACTCATTGTTC+AGG - chr3.3:94522914-94522933 MS.gene064860:intron 40.0%
GTTTCCAAACATTGACAGAG+CGG + chr3.3:94523267-94523286 None:intergenic 40.0%
TAACTGCACTTGTATTTGGG+AGG - chr3.3:94523120-94523139 MS.gene064860:CDS 40.0%
TCAGCAATGTCAACTTCTGA+TGG + chr3.3:94522746-94522765 None:intergenic 40.0%
TCTCAGTTTCCAACTTGTGT+GGG - chr3.3:94523011-94523030 MS.gene064860:intron 40.0%
TCTTGGAGGTTTACCAATTG+TGG + chr3.3:94521589-94521608 None:intergenic 40.0%
TGCAGCCAGTTTCAATCTAT+TGG + chr3.3:94521643-94521662 None:intergenic 40.0%
TGGGATGTAATGAGTAACCA+AGG - chr3.3:94523785-94523804 MS.gene064860:intron 40.0%
TTATCTGTTTCACGTGCCTT+AGG - chr3.3:94523644-94523663 MS.gene064860:intron 40.0%
! AGTATGGGTTACTGAACTGT+TGG + chr3.3:94522906-94522925 None:intergenic 40.0%
! TTCTTGATTATGGGCTGTGA+TGG - chr3.3:94523758-94523777 MS.gene064860:intron 40.0%
!! CCAATGTGGAACTTGTTACT+TGG + chr3.3:94521887-94521906 None:intergenic 40.0%
!! GCTTGTTATCTAACAGGTAC+AGG + chr3.3:94522517-94522536 None:intergenic 40.0%
!! TTTTAAGAGTGTGGATGCAG+AGG - chr3.3:94522228-94522247 MS.gene064860:intron 40.0%
AAAGGGGAAGAAACTCTGCT+AGG + chr3.3:94522657-94522676 None:intergenic 45.0%
AACTCTCTCGAACACCTTTG+AGG + chr3.3:94523854-94523873 None:intergenic 45.0%
AAGGGGAAGAAACTCTGCTA+GGG + chr3.3:94522656-94522675 None:intergenic 45.0%
AGAGGAGATATCAAGCGAAC+TGG + chr3.3:94523087-94523106 None:intergenic 45.0%
AGTTCGCTTGATATCTCCTC+TGG - chr3.3:94523086-94523105 MS.gene064860:CDS 45.0%
CATCAACTCCTTTCTTGCCA+TGG + chr3.3:94523819-94523838 None:intergenic 45.0%
CATGGTAATTGCAAATGCGG+GGG - chr3.3:94523487-94523506 MS.gene064860:intron 45.0%
CTCAGTTTCCAACTTGTGTG+GGG - chr3.3:94523012-94523031 MS.gene064860:intron 45.0%
CTCTCAGTTTCCAACTTGTG+TGG - chr3.3:94523010-94523029 MS.gene064860:intron 45.0%
GAAACTGGCTGCATCAGATT+TGG - chr3.3:94521650-94521669 MS.gene064860:CDS 45.0%
GCAGGAAATCTTATTGACCG+AGG - chr3.3:94523727-94523746 MS.gene064860:intron 45.0%
GCTAAGGCTATGTCTCAAAC+TGG + chr3.3:94521619-94521638 None:intergenic 45.0%
GGAGGTTTACCAATTGTGGT+TGG + chr3.3:94521585-94521604 None:intergenic 45.0%
GGTTACTCATTACATCCCAC+AGG + chr3.3:94523784-94523803 None:intergenic 45.0%
TACAAGTGCAGTTAAAGCGG+TGG + chr3.3:94523114-94523133 None:intergenic 45.0%
TCAGGAAGTTGTGCTGAAAG+AGG - chr3.3:94522307-94522326 MS.gene064860:intron 45.0%
TTAGGTGACTGGCACATGAA+GGG - chr3.3:94523662-94523681 MS.gene064860:intron 45.0%
! AAACTGGAAGCATGTCTTGG+AGG + chr3.3:94521603-94521622 None:intergenic 45.0%
! CTCAAACTGGAAGCATGTCT+TGG + chr3.3:94521606-94521625 None:intergenic 45.0%
! GATTGAAAAACTTGGTGGGG+TGG - chr3.3:94523595-94523614 MS.gene064860:intron 45.0%
!! AGAAGGAGGTATCTCTATCC+TGG + chr3.3:94523954-94523973 None:intergenic 45.0%
!! TCAAAGGTGTTCGAGAGAGT+TGG - chr3.3:94523853-94523872 MS.gene064860:CDS 45.0%
AAAGGACAGGCAGAACCCTT+GGG + chr3.3:94523689-94523708 None:intergenic 50.0%
ACGAACCCCATAGAAAGCTC+CGG + chr3.3:94522416-94522435 None:intergenic 50.0%
AGAGGCGAAAGAGGGAACAA+AGG + chr3.3:94522675-94522694 None:intergenic 50.0%
AGATACCTCCTTCTCGAGTC+AGG - chr3.3:94523960-94523979 MS.gene064860:CDS 50.0%
AGGCGAAAGAGGGAACAAAG+GGG + chr3.3:94522673-94522692 None:intergenic 50.0%
AGTGTGGATGCAGAGGTTAC+TGG - chr3.3:94522235-94522254 MS.gene064860:intron 50.0%
ATTGCCTTCCCCACACAAGT+TGG + chr3.3:94523023-94523042 None:intergenic 50.0%
ATTGTCGAGCTGTACTGGGA+AGG - chr3.3:94523510-94523529 MS.gene064860:intron 50.0%
CATGGAGAAGAGGCGAAAGA+GGG + chr3.3:94522683-94522702 None:intergenic 50.0%
CTATCCTGGAAGGAGGATCT+GGG + chr3.3:94523940-94523959 None:intergenic 50.0%
CTCTTCCCGGAGCTTTCTAT+GGG - chr3.3:94522407-94522426 MS.gene064860:CDS 50.0%
CTTAGGTGACTGGCACATGA+AGG - chr3.3:94523661-94523680 MS.gene064860:intron 50.0%
CTTCATGTGCCAGTCACCTA+AGG + chr3.3:94523663-94523682 None:intergenic 50.0%
CTTGGTGGGGTGGTATATGA+TGG - chr3.3:94523605-94523624 MS.gene064860:intron 50.0%
GAGATGGAAGAGAGAAGCTG+CGG - chr3.3:94523372-94523391 MS.gene064860:intron 50.0%
GAGGCGAAAGAGGGAACAAA+GGG + chr3.3:94522674-94522693 None:intergenic 50.0%
GATTTCCTGCAACTCTGGCT+CGG + chr3.3:94523717-94523736 None:intergenic 50.0%
GGTATCTCTATCCTGGAAGG+AGG + chr3.3:94523947-94523966 None:intergenic 50.0%
GTTTCCAACTTGTGTGGGGA+AGG - chr3.3:94523016-94523035 MS.gene064860:intron 50.0%
TATCCTGGAAGGAGGATCTG+GGG + chr3.3:94523939-94523958 None:intergenic 50.0%
TCTATCCTGGAAGGAGGATC+TGG + chr3.3:94523941-94523960 None:intergenic 50.0%
TCTTCCCGGAGCTTTCTATG+GGG - chr3.3:94522408-94522427 MS.gene064860:CDS 50.0%
TGCTGTGACCATGGCAAGAA+AGG - chr3.3:94523808-94523827 MS.gene064860:intron 50.0%
TTTCACGTGCCTTAGGTGAC+TGG - chr3.3:94523651-94523670 MS.gene064860:intron 50.0%
! ATACTCCTCCTGACTCGAGA+AGG + chr3.3:94523971-94523990 None:intergenic 50.0%
! GTTCAGGTGTTTGATGGCCA+TGG - chr3.3:94522930-94522949 MS.gene064860:intron 50.0%
! TTCGAGAGAGTTGGTCAGAG+AGG - chr3.3:94523862-94523881 MS.gene064860:CDS 50.0%
!! GGAGGTATCTCTATCCTGGA+AGG + chr3.3:94523950-94523969 None:intergenic 50.0%
!! TAACCAAGGTGCTGTGACCA+TGG - chr3.3:94523799-94523818 MS.gene064860:intron 50.0%
ACGGCCGCTCTGTCAATGTT+TGG - chr3.3:94523260-94523279 MS.gene064860:intron 55.0%
CAAAGGACAGGCAGAACCCT+TGG + chr3.3:94523690-94523709 None:intergenic 55.0%
CCATAGAAAGCTCCGGGAAG+AGG + chr3.3:94522409-94522428 None:intergenic 55.0%
CCTCTTCCCGGAGCTTTCTA+TGG - chr3.3:94522406-94522425 MS.gene064860:CDS 55.0%
CGAACCCCATAGAAAGCTCC+GGG + chr3.3:94522415-94522434 None:intergenic 55.0%
GCATGGAGAAGAGGCGAAAG+AGG + chr3.3:94522684-94522703 None:intergenic 55.0%
GGGGATTGTCGAGCTGTACT+GGG - chr3.3:94523506-94523525 MS.gene064860:intron 55.0%
TACCTCCTTCTCGAGTCAGG+AGG - chr3.3:94523963-94523982 MS.gene064860:CDS 55.0%
TGGCACATGAAGGGTCCCAA+GGG - chr3.3:94523671-94523690 MS.gene064860:intron 55.0%
TTGCCATGGTCACAGCACCT+TGG + chr3.3:94523805-94523824 None:intergenic 55.0%
! AGTTAAAGCGGTGGTGCCAG+AGG + chr3.3:94523105-94523124 None:intergenic 55.0%
! CAGGTGTTTGATGGCCATGG+AGG - chr3.3:94522933-94522952 MS.gene064860:intron 55.0%
! TATGGGCTGTGATGGCCTGT+GGG - chr3.3:94523766-94523785 MS.gene064860:intron 55.0%
! TTATGGGCTGTGATGGCCTG+TGG - chr3.3:94523765-94523784 MS.gene064860:intron 55.0%
!! AACTCTGGCTCGGCACTCAA+AGG + chr3.3:94523707-94523726 None:intergenic 55.0%
!! AAGCAGCATCGGTTCCTCCA+TGG + chr3.3:94522950-94522969 None:intergenic 55.0%
CTGGCACATGAAGGGTCCCA+AGG - chr3.3:94523670-94523689 MS.gene064860:intron 60.0%
GAGCTGTACTGGGAAGGCGA+GGG - chr3.3:94523516-94523535 MS.gene064860:intron 60.0%
GGGGGATTGTCGAGCTGTAC+TGG - chr3.3:94523505-94523524 MS.gene064860:intron 60.0%
TCTCCCCAGATCCTCCTTCC+AGG - chr3.3:94523933-94523952 MS.gene064860:CDS 60.0%
! CTCCTCCTGACTCGAGAAGG+AGG + chr3.3:94523968-94523987 None:intergenic 60.0%
! TGGCTCGGCACTCAAAGGAC+AGG + chr3.3:94523702-94523721 None:intergenic 60.0%
CGAGCTGTACTGGGAAGGCG+AGG - chr3.3:94523515-94523534 MS.gene064860:intron 65.0%
!! GAGTGCCGAGCCAGAGTTGC+AGG - chr3.3:94523709-94523728 MS.gene064860:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 94521465 94524036 94521465 ID=MS.gene064860
chr3.3 mRNA 94521465 94524036 94521465 ID=MS.gene064860.t1;Parent=MS.gene064860
chr3.3 exon 94523830 94524036 94523830 ID=MS.gene064860.t1.exon1;Parent=MS.gene064860.t1
chr3.3 CDS 94523830 94524036 94523830 ID=cds.MS.gene064860.t1;Parent=MS.gene064860.t1
chr3.3 exon 94523072 94523266 94523072 ID=MS.gene064860.t1.exon2;Parent=MS.gene064860.t1
chr3.3 CDS 94523072 94523266 94523072 ID=cds.MS.gene064860.t1;Parent=MS.gene064860.t1
chr3.3 exon 94522360 94522565 94522360 ID=MS.gene064860.t1.exon3;Parent=MS.gene064860.t1
chr3.3 CDS 94522360 94522565 94522360 ID=cds.MS.gene064860.t1;Parent=MS.gene064860.t1
chr3.3 exon 94521465 94522017 94521465 ID=MS.gene064860.t1.exon4;Parent=MS.gene064860.t1
chr3.3 CDS 94521465 94522017 94521465 ID=cds.MS.gene064860.t1;Parent=MS.gene064860.t1
Gene Sequence

>MS.gene064860

ATGCATGTGGATATGGATTATTCTCCTCCAATTACAATACTAGAAGGCGATGATTGCAACAAAGACAATGATAATGATAATGATGATGACAAATTAGGAGATTTCAATAATCTTAAACCAACCACAATTGGTAAACCTCCAAGACATGCTTCCAGTTTGAGACATAGCCTTAGCTCCAATAGATTGAAACTGGCTGCATCAGATTTGGTATGTTATTCAACTTTTTCATAAAGTTTGATTTTTTTGCTAATATTTTTTTTTGTTGTAATAATTATATATTTTGACATTTTGGTTCATGTCATGTTTTGTGTCTTTGTTGTTCTTACTTTGTAGTATTAATTTCTTTTGTTGCTTTGCTTGCTATAATTTTCAGATAATTTTAAATTTTCGTTTATGTTTTTATTACAAAGAAAATGCTACCAAGTAACAAGTTCCACATTGGTTAAGGAATAAAAAAAGGTAAGTTTGTATGGAAGATGATGTATTTATTACATTAACTTGTATTGTTAAGATAAACTTTCCTTTTATGGATTCATTAACCAATGTTTAGATTACTAGTTAGCAAGATACTACTTGTTAGTTTTTTTTAGCAAGCTTTAATGCTCTTGTTAGTCTTCATAATTCACCTTGCTAAACTGATACACACATAAATGCTGTGAACTTCATTTCAATTTTTACCAATACTACTTTATACTTTACTTCCTATGTTGTCATATTCGTTGTAAAGCTTAGGTTATCTGATTTGTCTGTTTCTCTCTCTCTTTTTTAAGAGTGTGGATGCAGAGGTTACTGGAAGTAAGTCATCTTCTGAAAACAAGACAGATTTTGTTCCGATATTTCGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGATGAACACGTATGTATAGATGATCTTACTCAACACATAGGTTCTACTTCAAATGTTCCTCTTCCCGGAGCTTTCTATGGGGTTCGTATGTTATTCTTACTCGAGATTACAGTTTATATACATTTGATATGATATAAAGCTTCATATTTACATTCACATGTTGAACCTGTACCTGTTAGATAACAAGCTTTGTGTTTTCATTTGTTTACTTTGCTTAAAGGTAGTTTAGTCTTTTGTTACTTTTTGTTCATACATTTACCACTACTCTTTGTATTTCCCATCATTGATCGTACTGCATATTGTACCCTAGCAGAGTTTCTTCCCCTTTGTTCCCTCTTTCGCCTCTTCTCCATGCATTACTATTCTTAACAGAATCGTGGCCGATGTTTAATTTCCATCAGAAGTTGACATTGCTGAAGATTAGGACAAATGAGTAATAGGCTAGAGAGGTCTTTACTTTTGATATTTTCATAAAATATATTGTTTTAATGGATTGAAGTTTGTTGCTCATACAATGAGTTTCCACCTTTATTTTTGTTTGCATGTTAAAAAATCCAACAGTTCAGTAACCCATACTCATTGTTCAGGTGTTTGATGGCCATGGAGGAACCGATGCTGCTTTGTTTGTAAGAAATAACATCCTTAAACTCATTGTTGAGGACTCTCAGTTTCCAACTTGTGTGGGGAAGGCAATTACAAGTGCGTTTATGAAAGCTGATTATACATTTGCAGATTCCAGTTCGCTTGATATCTCCTCTGGCACCACCGCTTTAACTGCACTTGTATTTGGGAGGTAATGACCTTGCATTATGATTCCATGATTCTTTTCATTAATTTTAGCAAGTTTTAGGTGCCTTCAGATTTTATTGGTTGTTTGTTAGATCCTATTATTTTTAAGTGGGTGTTAGAACACGGCCGCTCTGTCAATGTTTGGAAACAATATAATGGCATTTGCTTCTTCAACCGTAATTTATCCGGGAAAAACATAAGATTCTGGGATAGTATTTATGTCTCATCTCATTGGAGATGGAAGAGAGAAGCTGCGGAAAGAAAACTTATATGCATTGTGTTCTCTGTTGTTGCATGATTTCTTATGAGCTCTCTCCCTAAATTTGTGAAATTTCATCATTGACAGGAACATGGTAATTGCAAATGCGGGGGATTGTCGAGCTGTACTGGGAAGGCGAGGGAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGTATTTCAGAAAGACTAAGGATTGAAAAACTTGGTGGGGTGGTATATGATGGATACTTGAATGGCCAATTATCTGTTTCACGTGCCTTAGGTGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGTCCTTTGAGTGCCGAGCCAGAGTTGCAGGAAATCTTATTGACCGAGGATGATGAATTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGTAACCAAGGTGCTGTGACCATGGCAAGAAAGGAGTTGATGATACATAATGATCCTCAAAGGTGTTCGAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCATGTGATAATTTAACGGTTATTGTGGTATGTTTCTCCCCAGATCCTCCTTCCAGGATAGAGATACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAAGCCTTACTTTACTTAAGGGTGTATTAGAGTGTTAG
Protein sequence

>MS.gene064860.t1

MHVDMDYSPPITILEGDDCNKDNDNDNDDDKLGDFNNLKPTTIGKPPRHASSLRHSLSSNRLKLAASDLSVDAEVTGSKSSSENKTDFVPIFRSGSCAERGPKQYMEDEHVCIDDLTQHIGSTSNVPLPGAFYGVFDGHGGTDAALFVRNNILKLIVEDSQFPTCVGKAITSAFMKADYTFADSSSLDISSGTTALTALVFGRNMVIANAGDCRAVLGRRGRAIEMSKDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQGAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSPDPPSRIEIPPSRVRRSISAESLTLLKGVLEC