Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065348.t1 | XP_004488117.1 | 92.2 | 103 | 7 | 1 | 1 | 102 | 44 | 146 | 5.00E-44 | 187.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065348.t1 | A0A1S2XHG7 | 92.2 | 103 | 7 | 1 | 1 | 102 | 44 | 146 | 3.6e-44 | 187.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049435 | MS.gene065348 | 0.805883 | 1.08E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene065348 | 0.831309 | 1.80E-55 | -1.69E-46 |
| MS.gene054291 | MS.gene065348 | -0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene057443 | MS.gene065348 | 0.808053 | 3.74E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene065348 | 0.803974 | 2.70E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene065348 | -0.824584 | 7.46E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065348.t1 | MTR_2g043370 | 96.907 | 97 | 3 | 0 | 1 | 97 | 34 | 130 | 2.26e-64 | 196 |
| MS.gene065348.t1 | MTR_7g076600 | 51.546 | 97 | 47 | 0 | 1 | 97 | 48 | 144 | 1.85e-27 | 102 |
| MS.gene065348.t1 | MTR_1g047620 | 57.377 | 61 | 26 | 0 | 1 | 61 | 48 | 108 | 2.22e-18 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAATGCTATTGTTTATA+AGG | 0.183643 | 2.4:-46842044 | MS.gene065348:intron |
| TTGATATTAGCTTGGGGAAT+TGG | 0.256716 | 2.4:-46842145 | MS.gene065348:CDS |
| CCGGTACCGTTTCCATGTTT+TGG | 0.290443 | 2.4:-46841154 | MS.gene065348:CDS |
| AATACCTTCTTGAAAGCATT+AGG | 0.326852 | 2.4:+46840453 | None:intergenic |
| TTGAAAATGTTGGAGTTAGA+AGG | 0.334068 | 2.4:-46840515 | MS.gene065348:CDS |
| TGATATTAGCTTGGGGAATT+GGG | 0.340131 | 2.4:-46842144 | MS.gene065348:CDS |
| TGCTTTATGTACCAGTTAGA+AGG | 0.346663 | 2.4:-46842111 | MS.gene065348:CDS |
| AAACAATAGCATTTGGAGTA+AGG | 0.358216 | 2.4:+46842050 | None:intergenic |
| CTAAGTATAAACCTTCTAAC+TGG | 0.364571 | 2.4:+46842100 | None:intergenic |
| CTCTGTTATTGATATTAGCT+TGG | 0.381718 | 2.4:-46842153 | MS.gene065348:CDS |
| TCTGTTATTGATATTAGCTT+GGG | 0.384025 | 2.4:-46842152 | MS.gene065348:CDS |
| ACCTTATAAACAATAGCATT+TGG | 0.387126 | 2.4:+46842043 | None:intergenic |
| CAGTGACGATGTTAAAATCT+TGG | 0.391514 | 2.4:-46840487 | MS.gene065348:CDS |
| TCTCTTAGAATTGAAAATGT+TGG | 0.435318 | 2.4:-46840525 | MS.gene065348:CDS |
| AGGGTACTTGCAATCCCTTT+CGG | 0.446250 | 2.4:-46840555 | MS.gene065348:CDS |
| AGTGACGATGTTAAAATCTT+GGG | 0.484992 | 2.4:-46840486 | MS.gene065348:CDS |
| AAAGTACCCACTGTACTGTT+TGG | 0.489475 | 2.4:+46842179 | None:intergenic |
| CCAAAACATGGAAACGGTAC+CGG | 0.543194 | 2.4:+46841154 | None:intergenic |
| CTAAGAGAATATACACCGAA+AGG | 0.552833 | 2.4:+46840540 | None:intergenic |
| AAATCCTAATGCTTTCAAGA+AGG | 0.556507 | 2.4:-46840457 | MS.gene065348:intron |
| TAAGAGAATATACACCGAAA+GGG | 0.557565 | 2.4:+46840541 | None:intergenic |
| TTATGCAGCACTCCAAAACA+TGG | 0.560395 | 2.4:+46841142 | None:intergenic |
| CTGTTATTGATATTAGCTTG+GGG | 0.569273 | 2.4:-46842151 | MS.gene065348:CDS |
| TCTAGCTCAGGTCACAAGGC+CGG | 0.575112 | 2.4:-46841173 | MS.gene065348:intron |
| CAAGTACCAAACAGTACAGT+GGG | 0.576403 | 2.4:-46842185 | MS.gene065348:CDS |
| AGCACTCCAAAACATGGAAA+CGG | 0.586314 | 2.4:+46841148 | None:intergenic |
| TATATCTAGCTCAGGTCACA+AGG | 0.589332 | 2.4:-46841177 | MS.gene065348:intron |
| GCATTCTGTGGCTGATGTCG+TGG | 0.596159 | 2.4:-46841101 | MS.gene065348:CDS |
| GCTGATGTCGTGGTTGAACA+AGG | 0.624287 | 2.4:-46841091 | MS.gene065348:intron |
| GCATGTCTTATTGCATTCTG+TGG | 0.631218 | 2.4:-46841113 | MS.gene065348:CDS |
| TCAAGTACCAAACAGTACAG+TGG | 0.671926 | 2.4:-46842186 | MS.gene065348:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTGAAAAAAATAAAAAAA+GGG | + | chr2.4:46841520-46841539 | None:intergenic | 10.0% |
| !! | TACTTGAAAAAAATAAAAAA+AGG | + | chr2.4:46841521-46841540 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATTTTTTTCTGT+TGG | - | chr2.4:46840558-46840577 | MS.gene065348:intron | 10.0% |
| !!! | TTTTTTTATTTTTTTCTGTT+GGG | - | chr2.4:46840559-46840578 | MS.gene065348:intron | 10.0% |
| !! | AATACATTAATATGTATAAG+AGG | - | chr2.4:46840671-46840690 | MS.gene065348:intron | 15.0% |
| !! | CATAATTATATAATTACATG+AGG | + | chr2.4:46841599-46841618 | None:intergenic | 15.0% |
| !! | CTCATGTAATTATATAATTA+TGG | - | chr2.4:46841597-46841616 | MS.gene065348:intron | 15.0% |
| !! | GATATAATTAATCATATACT+AGG | + | chr2.4:46841639-46841658 | None:intergenic | 15.0% |
| !! | GTATATTATTACTGAATATT+GGG | - | chr2.4:46840987-46841006 | MS.gene065348:intron | 15.0% |
| !! | TATAAATTGAAAGAAATAGT+AGG | + | chr2.4:46840539-46840558 | None:intergenic | 15.0% |
| !!! | ATAAACTATGAATTTGTTAT+TGG | - | chr2.4:46840850-46840869 | MS.gene065348:intron | 15.0% |
| !! | ATAATTTATCAAGAAAGTGA+AGG | + | chr2.4:46840780-46840799 | None:intergenic | 20.0% |
| !! | ATGTATTATATTTGCATGTA+TGG | - | chr2.4:46841311-46841330 | MS.gene065348:intron | 20.0% |
| !! | GGTATATTATTACTGAATAT+TGG | - | chr2.4:46840986-46841005 | MS.gene065348:intron | 20.0% |
| !! | TAGAAATTAAACTACAAAAC+CGG | + | chr2.4:46841938-46841957 | None:intergenic | 20.0% |
| !!! | AAATGGCATTAAACTTTTAA+GGG | - | chr2.4:46841122-46841141 | MS.gene065348:CDS | 20.0% |
| !!! | AGAAATCATGGTTTTAAATT+AGG | + | chr2.4:46841865-46841884 | None:intergenic | 20.0% |
| !!! | ATGCTATTTACAATAGTTAT+GGG | - | chr2.4:46841666-46841685 | MS.gene065348:intron | 20.0% |
| !!! | CTATATTAACATCTTTTACT+AGG | + | chr2.4:46840936-46840955 | None:intergenic | 20.0% |
| !!! | GAAATCATGGTTTTAAATTA+GGG | + | chr2.4:46841864-46841883 | None:intergenic | 20.0% |
| !!! | TATGCTATTTACAATAGTTA+TGG | - | chr2.4:46841665-46841684 | MS.gene065348:intron | 20.0% |
| !!! | TGAATTTTTGTTGTTGAAAT+TGG | - | chr2.4:46840626-46840645 | MS.gene065348:intron | 20.0% |
| !!! | TTAAAAGTTTAATGCCATTT+GGG | + | chr2.4:46841122-46841141 | None:intergenic | 20.0% |
| ! | AAGAAAATCACAATTTGATC+AGG | + | chr2.4:46842120-46842139 | None:intergenic | 25.0% |
| ! | AATCAATATCCTTTCTATTG+TGG | - | chr2.4:46841819-46841838 | MS.gene065348:intron | 25.0% |
| ! | ACCTTATAAACAATAGCATT+TGG | + | chr2.4:46840499-46840518 | None:intergenic | 25.0% |
| ! | ATTAATGATACTTGCTCATA+GGG | - | chr2.4:46841965-46841984 | MS.gene065348:intron | 25.0% |
| ! | ATTATATAATTACATGAGGC+TGG | + | chr2.4:46841595-46841614 | None:intergenic | 25.0% |
| ! | CTTAAAAGTTTAATGCCATT+TGG | + | chr2.4:46841123-46841142 | None:intergenic | 25.0% |
| ! | TAATGAGATACTAGAAATCA+TGG | + | chr2.4:46841877-46841896 | None:intergenic | 25.0% |
| ! | TAGTTTCATGCTATAAGATT+TGG | - | chr2.4:46841542-46841561 | MS.gene065348:intron | 25.0% |
| ! | TCCAAATGCTATTGTTTATA+AGG | - | chr2.4:46840495-46840514 | MS.gene065348:CDS | 25.0% |
| ! | TCTCTTAGAATTGAAAATGT+TGG | - | chr2.4:46842014-46842033 | MS.gene065348:intron | 25.0% |
| ! | TTTACTAGGATTTAAACATG+AGG | + | chr2.4:46840922-46840941 | None:intergenic | 25.0% |
| !! | CAAATGGCATTAAACTTTTA+AGG | - | chr2.4:46841121-46841140 | MS.gene065348:CDS | 25.0% |
| !! | TCTGTTATTGATATTAGCTT+GGG | - | chr2.4:46840387-46840406 | MS.gene065348:intron | 25.0% |
| !! | TGCTATTTACAATAGTTATG+GGG | - | chr2.4:46841667-46841686 | MS.gene065348:intron | 25.0% |
| AAATCCTAATGCTTTCAAGA+AGG | - | chr2.4:46842082-46842101 | MS.gene065348:CDS | 30.0% | |
| AGTGACGATGTTAAAATCTT+GGG | - | chr2.4:46842053-46842072 | MS.gene065348:CDS | 30.0% | |
| AGTGAGTGATGTATCATAAA+AGG | + | chr2.4:46841238-46841257 | None:intergenic | 30.0% | |
| ATACCTGGTCTATATTCAAA+AGG | - | chr2.4:46841206-46841225 | MS.gene065348:intron | 30.0% | |
| ATTATATAATTATGGCCCTC+TGG | - | chr2.4:46841605-46841624 | MS.gene065348:intron | 30.0% | |
| CATTAATTGTACCTGTTCAT+AGG | - | chr2.4:46841892-46841911 | MS.gene065348:intron | 30.0% | |
| CTAAGTATAAACCTTCTAAC+TGG | + | chr2.4:46840442-46840461 | None:intergenic | 30.0% | |
| CTCTGTTATTGATATTAGCT+TGG | - | chr2.4:46840386-46840405 | MS.gene065348:intron | 30.0% | |
| GATTAATGATACTTGCTCAT+AGG | - | chr2.4:46841964-46841983 | MS.gene065348:intron | 30.0% | |
| TAAGAGAATATACACCGAAA+GGG | + | chr2.4:46842001-46842020 | None:intergenic | 30.0% | |
| TGTCTAAATTGTGGTTTCAA+TGG | - | chr2.4:46841785-46841804 | MS.gene065348:intron | 30.0% | |
| TTGAAAATGTTGGAGTTAGA+AGG | - | chr2.4:46842024-46842043 | MS.gene065348:intron | 30.0% | |
| ! | AAACAATAGCATTTGGAGTA+AGG | + | chr2.4:46840492-46840511 | None:intergenic | 30.0% |
| ! | ACTCACTTTAGACATGATTT+TGG | - | chr2.4:46841251-46841270 | MS.gene065348:intron | 30.0% |
| ! | CTCACTTTAGACATGATTTT+GGG | - | chr2.4:46841252-46841271 | MS.gene065348:intron | 30.0% |
| ! | CTGTTATTGATATTAGCTTG+GGG | - | chr2.4:46840388-46840407 | MS.gene065348:intron | 30.0% |
| ! | GAATGAGTTGAGAAGTTAAA+GGG | - | chr2.4:46840896-46840915 | MS.gene065348:intron | 30.0% |
| ! | TGAATGAGTTGAGAAGTTAA+AGG | - | chr2.4:46840895-46840914 | MS.gene065348:intron | 30.0% |
| ! | TTACCTTTTGAATATAGACC+AGG | + | chr2.4:46841212-46841231 | None:intergenic | 30.0% |
| ! | TTCTGTGTTCTTTAAGCTTT+TGG | - | chr2.4:46841490-46841509 | MS.gene065348:intron | 30.0% |
| ! | TTTCATTTTCCTACATGTTG+CGG | + | chr2.4:46841758-46841777 | None:intergenic | 30.0% |
| ! | TTTTCTGTTGGGAATATTAC+TGG | - | chr2.4:46840570-46840589 | MS.gene065348:intron | 30.0% |
| !! | AAGATTTTAACATCGTCACT+GGG | + | chr2.4:46842053-46842072 | None:intergenic | 30.0% |
| !! | AATACCTTCTTGAAAGCATT+AGG | + | chr2.4:46842089-46842108 | None:intergenic | 30.0% |
| !! | ATGAATTTGTTATTGGAGCT+GGG | - | chr2.4:46840857-46840876 | MS.gene065348:intron | 30.0% |
| !! | CTGTCTTGTTTGTAATCAAA+GGG | + | chr2.4:46841020-46841039 | None:intergenic | 30.0% |
| !! | TATGAATTTGTTATTGGAGC+TGG | - | chr2.4:46840856-46840875 | MS.gene065348:intron | 30.0% |
| !! | TGTCTTGTTTGTAATCAAAG+GGG | + | chr2.4:46841019-46841038 | None:intergenic | 30.0% |
| !!! | AAACTTCTTTTTTCTTTGCC+TGG | - | chr2.4:46842181-46842200 | MS.gene065348:CDS | 30.0% |
| AAACCACAATTTAGACAGCA+AGG | + | chr2.4:46841782-46841801 | None:intergenic | 35.0% | |
| AGGCTGGAAGAATAAAAGTA+AGG | + | chr2.4:46841579-46841598 | None:intergenic | 35.0% | |
| ATACTAGGAATTACAACCAG+AGG | + | chr2.4:46841624-46841643 | None:intergenic | 35.0% | |
| ATAGTAACATTTAGCGTTCG+TGG | - | chr2.4:46840952-46840971 | MS.gene065348:intron | 35.0% | |
| ATCAAGAAAGTGAAGGCAAA+CGG | + | chr2.4:46840773-46840792 | None:intergenic | 35.0% | |
| CAAAACCAATCCTCTTCAAT+AGG | + | chr2.4:46840716-46840735 | None:intergenic | 35.0% | |
| CAGTGACGATGTTAAAATCT+TGG | - | chr2.4:46842052-46842071 | MS.gene065348:CDS | 35.0% | |
| CATTGTTTAAATTGCGACTG+TGG | - | chr2.4:46841703-46841722 | MS.gene065348:intron | 35.0% | |
| CTAAGAGAATATACACCGAA+AGG | + | chr2.4:46842002-46842021 | None:intergenic | 35.0% | |
| CTCTAATCAAAACTCCCAAA+TGG | - | chr2.4:46841105-46841124 | MS.gene065348:CDS | 35.0% | |
| TAACAGCCTAAAAAGAAACC+AGG | + | chr2.4:46842202-46842221 | None:intergenic | 35.0% | |
| TACATGTTGCGGCAATATAA+AGG | + | chr2.4:46841747-46841766 | None:intergenic | 35.0% | |
| TACTAGGAATTACAACCAGA+GGG | + | chr2.4:46841623-46841642 | None:intergenic | 35.0% | |
| TGCTTTATGTACCAGTTAGA+AGG | - | chr2.4:46840428-46840447 | MS.gene065348:intron | 35.0% | |
| TGTTGGGAATATTACTGGTA+TGG | - | chr2.4:46840575-46840594 | MS.gene065348:intron | 35.0% | |
| TTTATATTGCCGCAACATGT+AGG | - | chr2.4:46841746-46841765 | MS.gene065348:intron | 35.0% | |
| TTTCTATTGTGGCTGCAATT+GGG | - | chr2.4:46841830-46841849 | MS.gene065348:intron | 35.0% | |
| ! | AATCCTTGCTGTCTAAATTG+TGG | - | chr2.4:46841776-46841795 | MS.gene065348:intron | 35.0% |
| ! | ACTTTAGACATGATTTTGGG+TGG | - | chr2.4:46841255-46841274 | MS.gene065348:intron | 35.0% |
| ! | ATCTGTGTTATATCTAGCTC+AGG | - | chr2.4:46841354-46841373 | MS.gene065348:intron | 35.0% |
| ! | TCTTTGCCTGGTTTCTTTTT+AGG | - | chr2.4:46842193-46842212 | MS.gene065348:CDS | 35.0% |
| ! | TGATATTAGCTTGGGGAATT+GGG | - | chr2.4:46840395-46840414 | MS.gene065348:intron | 35.0% |
| ! | TTGATATTAGCTTGGGGAAT+TGG | - | chr2.4:46840394-46840413 | MS.gene065348:intron | 35.0% |
| !! | CAAGATTTTAACATCGTCAC+TGG | + | chr2.4:46842054-46842073 | None:intergenic | 35.0% |
| !! | GCTGTCTTGTTTGTAATCAA+AGG | + | chr2.4:46841021-46841040 | None:intergenic | 35.0% |
| !!! | AGAGGATTTGTTTTGTCTTC+TGG | - | chr2.4:46840689-46840708 | MS.gene065348:intron | 35.0% |
| !!! | GAGGATTTGTTTTGTCTTCT+GGG | - | chr2.4:46840690-46840709 | MS.gene065348:intron | 35.0% |
| !!! | TTGGGAGTTTTGATTAGAGA+GGG | + | chr2.4:46841104-46841123 | None:intergenic | 35.0% |
| !!! | TTTGGGAGTTTTGATTAGAG+AGG | + | chr2.4:46841105-46841124 | None:intergenic | 35.0% |
| AGCACTCCAAAACATGGAAA+CGG | + | chr2.4:46841394-46841413 | None:intergenic | 40.0% | |
| AGGAATAGAGCCTTTGTCAT+CGG | + | chr2.4:46841062-46841081 | None:intergenic | 40.0% | |
| CAAGTACCAAACAGTACAGT+GGG | - | chr2.4:46840354-46840373 | MS.gene065348:intron | 40.0% | |
| CAATTGCAGCCACAATAGAA+AGG | + | chr2.4:46841831-46841850 | None:intergenic | 40.0% | |
| CTTTCTATTGTGGCTGCAAT+TGG | - | chr2.4:46841829-46841848 | MS.gene065348:intron | 40.0% | |
| GTGAGTAGTATCCTATGAAC+AGG | + | chr2.4:46841906-46841925 | None:intergenic | 40.0% | |
| TACTACTCACAAAGTTGCAC+CGG | - | chr2.4:46841916-46841935 | MS.gene065348:intron | 40.0% | |
| TCAAGAAAGTGAAGGCAAAC+GGG | + | chr2.4:46840772-46840791 | None:intergenic | 40.0% | |
| TCAAGTACCAAACAGTACAG+TGG | - | chr2.4:46840353-46840372 | MS.gene065348:intron | 40.0% | |
| TTAAATTGCGACTGTGGTTG+CGG | - | chr2.4:46841709-46841728 | MS.gene065348:intron | 40.0% | |
| TTATGCAGCACTCCAAAACA+TGG | + | chr2.4:46841400-46841419 | None:intergenic | 40.0% | |
| TTCTATTGTGGCTGCAATTG+GGG | - | chr2.4:46841831-46841850 | MS.gene065348:intron | 40.0% | |
| ! | AAAGTACCCACTGTACTGTT+TGG | + | chr2.4:46840363-46840382 | None:intergenic | 40.0% |
| ! | AGGGCAACATCTTGTCATTT+GGG | + | chr2.4:46841085-46841104 | None:intergenic | 40.0% |
| ! | GCATGTCTTATTGCATTCTG+TGG | - | chr2.4:46841426-46841445 | MS.gene065348:intron | 40.0% |
| ! | TATATCTAGCTCAGGTCACA+AGG | - | chr2.4:46841362-46841381 | MS.gene065348:intron | 40.0% |
| !! | ATTTTAACATCGTCACTGGG+TGG | + | chr2.4:46842050-46842069 | None:intergenic | 40.0% |
| !! | GACATGATTTTGGGTGGTTT+TGG | - | chr2.4:46841261-46841280 | MS.gene065348:intron | 40.0% |
| !! | TGTCATCCAGAAAGTGTTAG+CGG | - | chr2.4:46840734-46840753 | MS.gene065348:intron | 40.0% |
| ACAAACAAGACAGCACTTCG+AGG | - | chr2.4:46841027-46841046 | MS.gene065348:intron | 45.0% | |
| CAAACAAGACAGCACTTCGA+GGG | - | chr2.4:46841028-46841047 | MS.gene065348:intron | 45.0% | |
| CCAAAACATGGAAACGGTAC+CGG | + | chr2.4:46841388-46841407 | None:intergenic | 45.0% | |
| GAGGGCAACATCTTGTCATT+TGG | + | chr2.4:46841086-46841105 | None:intergenic | 45.0% | |
| GGAATAGAGCCTTTGTCATC+GGG | + | chr2.4:46841061-46841080 | None:intergenic | 45.0% | |
| ! | AGGGTACTTGCAATCCCTTT+CGG | - | chr2.4:46841984-46842003 | MS.gene065348:intron | 45.0% |
| ! | GCAACATCTTGTCATTTGGG+AGG | + | chr2.4:46841082-46841101 | None:intergenic | 45.0% |
| ! | GTTGCTCATGTGGTTCTATC+TGG | - | chr2.4:46841151-46841170 | MS.gene065348:CDS | 45.0% |
| !!! | AGGGAGTTTTGTTGCTCATG+TGG | - | chr2.4:46841141-46841160 | MS.gene065348:CDS | 45.0% |
| CTGGGCCTATTGAAGAGGAT+TGG | - | chr2.4:46840708-46840727 | MS.gene065348:intron | 50.0% | |
| GCGTTCGTGGTAGAACAAAC+TGG | - | chr2.4:46840965-46840984 | MS.gene065348:intron | 50.0% | |
| GCTGATGTCGTGGTTGAACA+AGG | - | chr2.4:46841448-46841467 | MS.gene065348:intron | 50.0% | |
| GTCTTCTGGGCCTATTGAAG+AGG | - | chr2.4:46840703-46840722 | MS.gene065348:intron | 50.0% | |
| TTGTGGTTTCAATGGCGTCG+CGG | - | chr2.4:46841793-46841812 | MS.gene065348:intron | 50.0% | |
| ! | CCGGTACCGTTTCCATGTTT+TGG | - | chr2.4:46841385-46841404 | MS.gene065348:intron | 50.0% |
| CTAGTTGCGCGCAAGATACC+TGG | - | chr2.4:46841191-46841210 | MS.gene065348:intron | 55.0% | |
| GCATTCTGTGGCTGATGTCG+TGG | - | chr2.4:46841438-46841457 | MS.gene065348:intron | 55.0% | |
| GGTCTGCTTCCCGATGACAA+AGG | - | chr2.4:46841049-46841068 | MS.gene065348:intron | 55.0% | |
| ! | TCTAGCTCAGGTCACAAGGC+CGG | - | chr2.4:46841366-46841385 | MS.gene065348:intron | 55.0% |
| GCTGCGCCGCTAACACTTTC+TGG | + | chr2.4:46840743-46840762 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 46840337 | 46842224 | 46840337 | ID=MS.gene065348 |
| chr2.4 | mRNA | 46840337 | 46842224 | 46840337 | ID=MS.gene065348.t1;Parent=MS.gene065348 |
| chr2.4 | exon | 46842045 | 46842224 | 46842045 | ID=MS.gene065348.t1.exon1;Parent=MS.gene065348.t1 |
| chr2.4 | CDS | 46842045 | 46842224 | 46842045 | ID=cds.MS.gene065348.t1;Parent=MS.gene065348.t1 |
| chr2.4 | exon | 46841092 | 46841185 | 46841092 | ID=MS.gene065348.t1.exon2;Parent=MS.gene065348.t1 |
| chr2.4 | CDS | 46841092 | 46841185 | 46841092 | ID=cds.MS.gene065348.t1;Parent=MS.gene065348.t1 |
| chr2.4 | exon | 46840458 | 46840575 | 46840458 | ID=MS.gene065348.t1.exon3;Parent=MS.gene065348.t1 |
| chr2.4 | CDS | 46840458 | 46840575 | 46840458 | ID=cds.MS.gene065348.t1;Parent=MS.gene065348.t1 |
| chr2.4 | exon | 46840337 | 46840346 | 46840337 | ID=MS.gene065348.t1.exon4;Parent=MS.gene065348.t1 |
| chr2.4 | CDS | 46840337 | 46840346 | 46840337 | ID=cds.MS.gene065348.t1;Parent=MS.gene065348.t1 |
| Gene Sequence |
| Protein sequence |
