AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049435


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049435.t1 MTR_3g093440 96.915 778 23 1 1 777 1 778 0.0 1553
MS.gene049435.t1 MTR_3g073000 28.105 153 93 4 459 596 182 332 5.26e-11 66.2
MS.gene049435.t1 MTR_3g073000 28.105 153 93 4 459 596 182 332 6.40e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049435.t1 AT1G33400 44.697 792 418 7 1 776 1 788 0.0 681
MS.gene049435.t1 AT1G33400 44.667 750 395 7 43 776 55 800 0.0 660
MS.gene049435.t1 AT1G33400 44.160 625 329 7 168 776 2 622 0.0 535

Find 122 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCCATTTGAAAGTAAAT+TGG 0.199937 3.3:+77875576 MS.gene049435:CDS
AACACTGCGCCAGAACAATT+TGG 0.217761 3.3:-77877467 None:intergenic
TTTGCCCACCTGCCTTTATT+TGG 0.225137 3.3:-77875179 None:intergenic
AGAAACTCAAACAAGCAATT+AGG 0.229319 3.3:+77871149 MS.gene049435:CDS
TATTGTCTTAAACATTCTTA+TGG 0.241604 3.3:+77875628 MS.gene049435:CDS
TATGAATAGAAGCGTCATTT+TGG 0.260629 3.3:-77877788 None:intergenic
TACTACTATATTTGTGCTCT+TGG 0.267628 3.3:-77872460 None:intergenic
TCATACAATTCACTTTAATC+TGG 0.303169 3.3:-77875931 None:intergenic
AAGCCTTAATATGCATAAAA+AGG 0.306459 3.3:+77877880 MS.gene049435:CDS
AGAAAATATGCATGAACATT+TGG 0.324630 3.3:-77876308 None:intergenic
ACTGCCTTCTGACATAGTTT+TGG 0.338485 3.3:+77875362 MS.gene049435:CDS
AAATTTGCATGCATACAATA+AGG 0.339149 3.3:+77878182 MS.gene049435:CDS
TTCATCCGTCCAACTTTACT+TGG 0.341657 3.3:+77879756 MS.gene049435:CDS
AGTGGGAGAATTACAATTAT+CGG 0.343600 3.3:+77878820 MS.gene049435:CDS
ACCATGCCTCTTCCTTTATC+AGG 0.346989 3.3:-77874524 None:intergenic
GAAACTCAAACAAGCAATTA+GGG 0.353034 3.3:+77871150 MS.gene049435:CDS
ATTGCTTGTTTGAGTTTCTC+TGG 0.360886 3.3:-77871145 None:intergenic
CACCTGCCTTTATTTGGCAT+TGG 0.370556 3.3:-77875173 None:intergenic
CTATATTTGTGCTCTTGGAT+TGG 0.397564 3.3:-77872455 None:intergenic
ACACTGCGCCAGAACAATTT+GGG 0.399716 3.3:-77877466 None:intergenic
TTCCTTATCTTCAGTACCTT+AGG 0.401357 3.3:+77879860 MS.gene049435:CDS
TGATATAGAGATTCCATTGA+TGG 0.401639 3.3:-77875662 None:intergenic
GGAGCTATGCTTGCCATCAA+TGG 0.404119 3.3:+77875649 MS.gene049435:CDS
CTCGCACCAATGCCAAATAA+AGG 0.406668 3.3:+77875167 MS.gene049435:CDS
GGCAAAGCTATTTATAAAGT+TGG 0.408738 3.3:+77876260 MS.gene049435:CDS
TTGTTTCTTACCATAGCATA+TGG 0.409749 3.3:-77874593 None:intergenic
AGCATATTCAGCAAGATTGT+TGG 0.410224 3.3:-77875247 None:intergenic
TCAATTTCACCAACTTCAAA+AGG 0.415930 3.3:-77871579 None:intergenic
TGTGTGAACCCAAATTGTTC+TGG 0.426197 3.3:+77877458 MS.gene049435:CDS
ATGCAGTTCTTACCGTGATC+TGG 0.426263 3.3:+77877833 MS.gene049435:CDS
ATTTCTAAATTTCTCTCCTA+AGG 0.427458 3.3:-77879876 None:intergenic
GCATATTCAGCAAGATTGTT+GGG 0.430584 3.3:-77875246 None:intergenic
CTCCTAAGGTACTGAAGATA+AGG 0.430916 3.3:-77879862 None:intergenic
GAATCCAATTTACTTTCAAA+TGG 0.433870 3.3:-77875580 None:intergenic
GTAGGTCGTTCAAGCAATAA+TGG 0.435815 3.3:-77875098 None:intergenic
AGATCTCAAAGCGTCTGAAA+TGG 0.439734 3.3:-77878142 None:intergenic
TTTAACTAGTAATGTGGAAC+AGG 0.443391 3.3:+77876033 MS.gene049435:CDS
GAACATTTGGTTGGCAAGAA+TGG 0.445371 3.3:-77876295 None:intergenic
AAATGTACACTGGAATGAAA+TGG 0.446196 3.3:-77876013 None:intergenic
ACAACACAAGCCGTAGCAGC+TGG 0.447881 3.3:+77876353 MS.gene049435:CDS
AATGATTGTGAGCAAAAGAT+TGG 0.447994 3.3:+77875288 MS.gene049435:CDS
GTAGTACGTACCTGGTGAAA+AGG 0.449674 3.3:-77871238 None:intergenic
CCGCCATCTGATGTTTCACC+AGG 0.449958 3.3:+77874548 MS.gene049435:CDS
GCCTCTTCCTTTATCAGGTA+CGG 0.454469 3.3:-77874519 None:intergenic
GCATTTCATTGTCAATGTAC+TGG 0.457687 3.3:+77877389 MS.gene049435:CDS
TTATGGACTTCATGCAGACT+TGG 0.466543 3.3:+77879834 MS.gene049435:CDS
GGAAAGGCAAATATTGCATT+GGG 0.466884 3.3:+77872330 MS.gene049435:CDS
TCTGGCATCAGGCATGGTAT+AGG 0.467429 3.3:+77872304 MS.gene049435:intron
AAACACACCTTTGAATAGCT+TGG 0.472303 3.3:-77871837 None:intergenic
CATACAATTCACTTTAATCT+GGG 0.482197 3.3:-77875930 None:intergenic
ACACTTTGCAGCTTTATTTG+AGG 0.485080 3.3:-77874494 None:intergenic
AATATGCATGAACATTTGGT+TGG 0.489714 3.3:-77876304 None:intergenic
AGTGTCTCCGTACCTGATAA+AGG 0.493636 3.3:+77874512 MS.gene049435:CDS
AAGAGTGTCGAATCATCAAC+AGG 0.494373 3.3:+77872390 MS.gene049435:CDS
TAAGCAATAACTATATCATC+AGG 0.495058 3.3:-77879718 None:intergenic
CGTAGCAGCTGGGTGTCAGC+TGG 0.497449 3.3:+77876364 MS.gene049435:CDS
GTCAACAGCATTGGTCGAAT+AGG 0.497911 3.3:+77879793 MS.gene049435:CDS
AAATTGTTCTGGCGCAGTGT+TGG 0.499251 3.3:+77877469 MS.gene049435:CDS
ATGTCAGAAGGCAGTACAGC+AGG 0.510667 3.3:-77875354 None:intergenic
GGCTTTAGATTATTATACTC+AGG 0.514932 3.3:+77871441 MS.gene049435:CDS
TCATTGTAAAGCATCTAGTC+AGG 0.526287 3.3:+77878847 MS.gene049435:CDS
TGATGTTTCACCAGGTTCGT+TGG 0.526556 3.3:+77874556 MS.gene049435:CDS
TAGTACGTACCTGGTGAAAA+GGG 0.527455 3.3:-77871237 None:intergenic
CTCTAATGCTGATTATGTCA+AGG 0.527726 3.3:+77871420 MS.gene049435:CDS
TGTCAGCTGGAATTGTCTTA+CGG 0.527745 3.3:+77876377 MS.gene049435:CDS
AGGAAAGGCAAATATTGCAT+TGG 0.532015 3.3:+77872329 MS.gene049435:CDS
GGAATTGTCTTACGGTCCAC+AGG 0.539785 3.3:+77876385 MS.gene049435:CDS
TATTGTCACCCAAGTAAAGT+TGG 0.540829 3.3:-77879765 None:intergenic
TTAAAATCAATAGACGCTCA+TGG 0.541128 3.3:+77875965 MS.gene049435:CDS
AAGAACGTAATTATCTTCTG+TGG 0.542033 3.3:-77875214 None:intergenic
CAATGGAATCTCTATATCAC+AGG 0.542199 3.3:+77875666 MS.gene049435:CDS
TGCTGAAGAACCATATGCTA+TGG 0.542990 3.3:+77874583 MS.gene049435:CDS
GGAGAACAGCTTGAGTACTA+CGG 0.546828 3.3:+77872497 MS.gene049435:CDS
TTCCCGCACAGAGCATAGCT+AGG 0.547122 3.3:-77871349 None:intergenic
ATACAAGGAACTCTATCAGC+AGG 0.548739 3.3:-77875120 None:intergenic
CACCAATGCCAAATAAAGGC+AGG 0.551316 3.3:+77875171 MS.gene049435:CDS
TCATCCGTCCAACTTTACTT+GGG 0.552845 3.3:+77879757 MS.gene049435:CDS
CAGCTGACACCCAGCTGCTA+CGG 0.561855 3.3:-77876363 None:intergenic
AGTAGTACAGCCGCGACAGA+AGG 0.563195 3.3:+77872476 MS.gene049435:CDS
ACCCTAGCTATGCTCTGTGC+GGG 0.563516 3.3:+77871347 MS.gene049435:CDS
TCCGTACCTGATAAAGGAAG+AGG 0.569385 3.3:+77874518 MS.gene049435:CDS
GAGAACAGCTTGAGTACTAC+GGG 0.569449 3.3:+77872498 MS.gene049435:CDS
TCCCGCACAGAGCATAGCTA+GGG 0.570994 3.3:-77871348 None:intergenic
AATAGTGCTGTCAACAGCAT+TGG 0.571018 3.3:+77879784 MS.gene049435:CDS
TCAGCATGAACCAACGAACC+TGG 0.571881 3.3:-77874566 None:intergenic
GATATGTCCAAGCTATTCAA+AGG 0.573360 3.3:+77871830 MS.gene049435:CDS
CTGCATTTCAAACAGACTCC+AGG 0.574365 3.3:-77877816 None:intergenic
ATGAATGTCAAGGAGTGCAT+TGG 0.576376 3.3:+77875331 MS.gene049435:CDS
TTACTTTATCAGCAACAGCT+AGG 0.576576 3.3:-77877532 None:intergenic
GCTTCTATTCATATTCAACC+TGG 0.579067 3.3:+77877798 MS.gene049435:CDS
CAATGCCAAATAAAGGCAGG+TGG 0.596184 3.3:+77875174 MS.gene049435:CDS
CCAGCCAAAACTATGTCAGA+AGG 0.604974 3.3:-77875366 None:intergenic
TGTACATTTAACTAGTAATG+TGG 0.607675 3.3:+77876027 MS.gene049435:CDS
ATATGGAAATGACAGGCTGC+AGG 0.608699 3.3:+77878086 MS.gene049435:intron
TGAAATATAGGCATTACGAA+AGG 0.609774 3.3:+77871554 MS.gene049435:intron
ATTACTAGTTAAATGTACAC+TGG 0.610954 3.3:-77876023 None:intergenic
GGACTGTCAGATCAGTCTGT+AGG 0.619934 3.3:+77875986 MS.gene049435:CDS
GAACATAAACATGAATGTCA+AGG 0.620275 3.3:+77875321 MS.gene049435:CDS
CATTGGTGCGAGCAGTACAA+TGG 0.620389 3.3:-77875156 None:intergenic
CAACACAAGCCGTAGCAGCT+GGG 0.623688 3.3:+77876354 MS.gene049435:CDS
ACCTGATAAAGGAAGAGGCA+TGG 0.627081 3.3:+77874523 MS.gene049435:CDS
AAGAAGATGGAGACTCTGAA+AGG 0.627632 3.3:+77871115 None:intergenic
GTGTCGAATCATCAACAGGA+GGG 0.630754 3.3:+77872394 MS.gene049435:CDS
GGTATTGAACACGATATACA+AGG 0.636863 3.3:-77875135 None:intergenic
GTCACCCAAGTAAAGTTGGA+CGG 0.637144 3.3:-77879761 None:intergenic
TATATCTCCTAGGTCAGAGT+GGG 0.639961 3.3:+77876239 MS.gene049435:intron
CACGTGAAGACTCCAGATCA+CGG 0.641430 3.3:-77877845 None:intergenic
GCGTTGAAATATAAGCAGCT+TGG 0.647283 3.3:+77871385 MS.gene049435:CDS
ATACAATAAGGTTATTGCAG+AGG 0.648948 3.3:+77878194 MS.gene049435:CDS
GACCCTAGCTATGCTCTGTG+CGG 0.649554 3.3:+77871346 MS.gene049435:CDS
AATGCCAAATAAAGGCAGGT+GGG 0.655407 3.3:+77875175 MS.gene049435:CDS
AAGGAACTCTATCAGCAGGT+AGG 0.661361 3.3:-77875116 None:intergenic
CATCAGGCATGGTATAGGAG+AGG 0.668519 3.3:+77872309 MS.gene049435:intron
AAGACAATATAACAATACAA+TGG 0.671651 3.3:-77875614 None:intergenic
GAACCTGGTGAAACATCAGA+TGG 0.672386 3.3:-77874551 None:intergenic
TCACACAATGAAAAGCATTG+AGG 0.676894 3.3:-77877442 None:intergenic
GGGAGAATTACAATTATCGG+CGG 0.684311 3.3:+77878823 MS.gene049435:CDS
AAGCTGTTCTCCTTCTGTCG+CGG 0.691374 3.3:-77872486 None:intergenic
AGTGTCGAATCATCAACAGG+AGG 0.693713 3.3:+77872393 MS.gene049435:CDS
GGCATGGTATAGGAGAGGAA+AGG 0.699336 3.3:+77872314 MS.gene049435:intron
CCTGGTGAAACATCAGATGG+CGG 0.706873 3.3:-77874548 None:intergenic
TTATATCTCCTAGGTCAGAG+TGG 0.711387 3.3:+77876238 MS.gene049435:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 77871121 77879894 77871121 ID=MS.gene049435
chr3.3 mRNA 77871121 77879894 77871121 ID=MS.gene049435.t1;Parent=MS.gene049435
chr3.3 exon 77871121 77871249 77871121 ID=MS.gene049435.t1.exon1;Parent=MS.gene049435.t1
chr3.3 CDS 77871121 77871249 77871121 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77871328 77871462 77871328 ID=MS.gene049435.t1.exon2;Parent=MS.gene049435.t1
chr3.3 CDS 77871328 77871462 77871328 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77871564 77871650 77871564 ID=MS.gene049435.t1.exon3;Parent=MS.gene049435.t1
chr3.3 CDS 77871564 77871650 77871564 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77871780 77871851 77871780 ID=MS.gene049435.t1.exon4;Parent=MS.gene049435.t1
chr3.3 CDS 77871780 77871851 77871780 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77872315 77872519 77872315 ID=MS.gene049435.t1.exon5;Parent=MS.gene049435.t1
chr3.3 CDS 77872315 77872519 77872315 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77874486 77874604 77874486 ID=MS.gene049435.t1.exon6;Parent=MS.gene049435.t1
chr3.3 CDS 77874486 77874604 77874486 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77875066 77875455 77875066 ID=MS.gene049435.t1.exon7;Parent=MS.gene049435.t1
chr3.3 CDS 77875066 77875455 77875066 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77875553 77875687 77875553 ID=MS.gene049435.t1.exon8;Parent=MS.gene049435.t1
chr3.3 CDS 77875553 77875687 77875553 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77875914 77876054 77875914 ID=MS.gene049435.t1.exon9;Parent=MS.gene049435.t1
chr3.3 CDS 77875914 77876054 77875914 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77876251 77876406 77876251 ID=MS.gene049435.t1.exon10;Parent=MS.gene049435.t1
chr3.3 CDS 77876251 77876406 77876251 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77877338 77877550 77877338 ID=MS.gene049435.t1.exon11;Parent=MS.gene049435.t1
chr3.3 CDS 77877338 77877550 77877338 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77877744 77877901 77877744 ID=MS.gene049435.t1.exon12;Parent=MS.gene049435.t1
chr3.3 CDS 77877744 77877901 77877744 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77878101 77878215 77878101 ID=MS.gene049435.t1.exon13;Parent=MS.gene049435.t1
chr3.3 CDS 77878101 77878215 77878101 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77878788 77878868 77878788 ID=MS.gene049435.t1.exon14;Parent=MS.gene049435.t1
chr3.3 CDS 77878788 77878868 77878788 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
chr3.3 exon 77879697 77879894 77879697 ID=MS.gene049435.t1.exon15;Parent=MS.gene049435.t1
chr3.3 CDS 77879697 77879894 77879697 ID=cds.MS.gene049435.t1;Parent=MS.gene049435.t1
Gene Sequence

>MS.gene049435

ATGGAGACTCTGAAAGGTGCGATTCCAGAGAAACTCAAACAAGCAATTAGGGATAGCACTGTAAACACTCTTAGCGACACTTGTTTTTCTCTTCATAACTTCTTTCTTCATTTCGACCCTTTTCACCAGGTACGTACTACCTTCTCCCATTTCAACTAAATCCCTAATTTCTCACTATTAATAACTTAACTCTTTCGTTGTTTTCAGACTATGACTCAACTTGCAGACCCTAGCTATGCTCTGTGCGGGAAAAGCAAAGAAGCTGCGTTGAAATATAAGCAGCTTGGTAATCAATGCTTCTCTAATGCTGATTATGTCAAGGCTTTAGATTATTATACTCAGGTATTATTTTGTTTTGTTTTTATTTAATAATGATAATGATAACATTCTCTCTTTTCTTTATTTTTGGTGAAATTAATCTGTTTTTGCAATTTGAAATATAGGCATTACGAAAGGCTCCTTTTGAAGTTGGTGAAATTGAAAATAATCTCATTGCGACATTGTATATTAATCGAGCTACTGTATTGCATGTAAGTTAAATTTAAATTTTTTGATATTAGCCTTAACCACATTCATAATCACTTTTTAATTATGAAATACAAGTCTTGATTGATGTAATTTCCATTTATTCATGTGTATGTGTGTGTGCCCTGCTGCAGAAAATGAATCTTTCAGTAGAATGTTTGCGCGACTGTGATCGAGCTCTTCAGATATGTCCAAGCTATTCAAAGGTGTGTTTTGCTTCAGTTACCTTTTTGTAATCTTAGTTTATTTGTATTATTAGGTTTGTTTTGATATGCGCAATAAATGTTTGTAGATTAAGTTGTTTATGAGCGATTAAAGAAATTTGATGAAAATACACACACATACAAACATAGATATGCATGTATGTGTCTATATATGAGTTAATTTATCAAAACAAAGTAATTGGTTTTTGTTTTGTTTCTTTGCCTAATTGCCACGTGGGAAAGTTTATTGGGGCTGACTCCACTTACAAACGTAATTTGAAATTATGTGTATTTTGAAATGCTTTGCTTACTCATCCGAATGATCAAGTTTCTGTCGAGAGACAGATTTTGGGGTTTGTTGTGTGCATTGAAGTTTGATGTAGTTGGCTACTGTAAAGAATAATGATGCAAACTTTCATTCTAGTTTTTATTCTTCTTTTTGATAACTTCATTATTCTGGCATCAGGCATGGTATAGGAGAGGAAAGGCAAATATTGCATTGGGAAATAATAGAGATGCAATCTGTGACTTAAATATAGCTAAGAGTGTCGAATCATCAACAGGAGGGAAGCGACAAATAGAATGTGAGCTGAAAATTATTTTAGACCAATCCAAGAGCACAAATATAGTAGTACAGCCGCGACAGAAGGAGAACAGCTTGAGTACTACGGGTAAGAAACTTTCCTTGTTAAGCAGCTAGCAAATTGGTTAAGGCCTCTGAAGCCCCGATACTCCAAAAATGGTGAAGTATCGTATCCGACACGTATCCGATACCGATACGTCCCGATACGTCCCGATACGCGTATCGGAAAAGTATCGGGCAATTAATATTTATTTTTTTGAAAAACAATGACCGATACGTGTCGGATACTTCCCGATACGCGTATCGGAGAAGTATCGGGCAGTTAATATTTATTTTTTGAAGGAAAAAAATGACCGATACGTGTCGGATACGACTAATTTGTACTTCGACACAGCTTACTTATACTCTGACACCTATACTTCTGTCTTACATATTTCCTTTAAAAAAAAGAAAAAATAAAATGATAAGAAATAAAACTACAAGTCTGGCAACGCTATCAAAATCATATTGTCTCTTCTAACCTAAAAAAATAGGGTTTCTCGTCACCACATAGCAATATCTATTCTCTCTTCTAACCATTACCACTGATTGAATTCTACTATGTTTCTCTTCTCTCTAATGTTACGTTTCTTCTGCTGTTTGTTTTCGATATAAATTAGTGTTAACTATTAAGTAGTCAACATTAGACAAAGATTTTTTTTTTTTATAGTACTTATGATGTTCTCTTTGGATGGTACTAATGATGTTTAGCTATATTCTATCTAATTTGTGCGGAAAAAAATATGTAATTGTCACTTGTTTTGATCATTTTCATTAATGTGAATGTTTGTTTATTATCATTTTTAGTTATGTTTATACATTGTGCACTTATACTAGTAATTTTAAATTTAATTTTTTTAATAACGTATCGAAGCCGTATCGTATCGGGAATTTTGAAAATTTTCCCGTATCGCCGTATCGGTATCGTATCGTATCGGTATCGTGTCAGGTATCTGGGCTTCATAGGTTAAGGCTTGTTGAGGACACTTTTGTTATAGTAATAGCATTTGAAGTATGTTTAAAAAGTAGCATGTTGCATTTTGAATTCATCGTGTTTCACTTTTGAATTCTGGGTGATTCTTTGGGCTGCTTATGTTTTCAACTTTTCTGTCCATAAGATATATGTCCACAATCATTTCTTAATCATGCCAAAAACCAGAAATGTACTTCAATCCTTGAAACAGTATGTTGATTTAAGATACATGTGGAGATGAGCCTATAGCAATAGTAGGTAAATAGGGTTTCCGAGGAAAGATTGAAATATTTATGTCGGCTTAGAGCTTGAGGTGCCTATTCAGTCTTGGATACCTTTAGTTCCCCAAAATTAAGCATGAGAAAATAGATTCAAACACAAAAGACTAGAAGATGAATGAAACTAAGGTTCAATGATCAACTCCAAGAAACTCAGCCAAAACACCCTCTTCCTTATAGAATTAAATTATGCACCTTATGGACTAGGGAGAACAACTCACTGTTTTGGAGCAGAAGTAGACTTATACTTCCCCTTGAAAGCCCCCTGCCTTTGTTTAAACATGTGGCTTACTTTCTCTTTACATATTTGATTTTCCATCCCTAAAAAGCCTTCAAAAAGTCACTTGCATACATCAAGAGGACCTTACTTTATTCTTCTCATTCCTGGAATGAAATGTGTGCAAACGTTTGAGATTGTATGCTAGACGAGTTAGGTGTTTCTTGAACTAACCCTTCTCCATTCTCTCAGAACTTTACCTCAGTACTAATTCACATCAAATGCTTCACTTTAATCCCATATTAAGAAACTAATATGCTAGAAAACTTCAATCAGAGGTTTCTAATATGTAAAGCTGTTCAGAAACAATCGTTGCCTCGTTGGTCACATTTTGTTTGCCCTGACCGCTATTCAATCCTATTTTACATATGGTGTAATCCGTATGCATTCTATACTATGGTCTAGTCCTTGCATTTATTTATGAAAGATCCATTTATTTTTCCTCTCCTTTTTGAGATAATAAGATGGTACAGTGCGTTTGTGGCAGGTGAGATGCCTCAAATAAAGCTGCAAAGTGTCTCCGTACCTGATAAAGGAAGAGGCATGGTGCCGCCATCTGATGTTTCACCAGGTTCGTTGGTTCATGCTGAAGAACCATATGCTATGGTAAGAAACAACTATTTTCTTTTTAATATTGAGTTTATTTTATCATACACATGCACATACAAAATGCTTTTAGATAAATGGAAAGTAGAAATGTGTGTTTTACAATCTCGCAAGTTTAGGGAAATAAGTGCTTCAATTGAAAGTACAAGAGGTTCTATTGCAAATGATCTGTTATTCAGCATTTTTTTATTGCCTGGTTTTCTTTCCAGAGAACTGGAGACTCCTGACCTCCCTTGGAACTGTACTTAATAGTTCAGATCTCAAACTTGTAAACCCAATTAATTCAAAGCAAATTCATACTTGTCATCTATAATAACTACAAGAGTTTGCTTATATTGGCGATTCTGTAAGCAAATAGGAACATGATTTTAATTTGTCCATATTTTATAAGCATTAATCCACAGTCTTCTTGAGATGAATGGGTTTGTTTAACTTTAACTTGATACTGTTTTTCTTTTCAGGTAATATTAAAGCAATGTCGTGAAACTCATTGCCATTATTGCTTGAACGACCTACCTGCTGATAGAGTTCCTTGTATATCGTGTTCAATACCATTGTACTGCTCGCACCAATGCCAAATAAAGGCAGGTGGGCAAATGTTCATGATATCCACAGAAGATAATTACGTTCTTAAAAACTTACCCAACAATCTTGCTGAATATGCTGCTGAAGTGATTCAATACAATGATTGTGAGCAAAAGATTGGTAATGTTACTGAACATAAACATGAATGTCAAGGAGTGCATTGGCCTGCTGTACTGCCTTCTGACATAGTTTTGGCTGGCAGACTTCTAGCGAAGTTTTTGTCAAAGAACTCATCTGGAGATATCACAAGTTTTGTGGAAAAGTTGGTATGTTTTAATTGCTTGCATTTCTGTTAGCTGATTGCATCATTGTTATCTGATTATAGGTATCTGGAAGCTTACAGCTTTTATTCTTACTGTGCAGGAGCTTTCTCATTGTTACGAACATATGCCATTTGAAAGTAAATTGGATTCACATTTGTACGCCATTGTATTGTTATATTGTCTTAAACATTCTTATGGAGCTATGCTTGCCATCAATGGAATCTCTATATCACAGGTTGTTTTGGCACTCTTTTTTTCCTTTGTTTTTTTGGGTATGGATGTGTCTATTTGTACAATAACATAACAATCATATCATAATAGAACCATCATAAACCTTGTGTAGCAGAATATTTTTTCAATATGATAGGGCAAGTATTTGTTGTTGAAGATATCAATTTATTTTGATATAATCATTAGAATAATAAATCATAACCAAGTTTCATCTTGTTTTGTCAATACAGGTGGTCATAGTTATTTCCCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCATGGACTGTCAGATCAGTCTGTAGGATTTCCATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTACATATTTCGCTGCACATATACTTATCAATTGGTTGCATATTTTCTTTCTTCATACATTTATTAGCCTGTTCTATATTTATGCATTTTTCACTGCAAGTCCTACTATGATAATTTAGACATTATTGGCGATGGCAATTTTTTTTTTGGGTGATATCCTTCGTGATTCTGAGCCATATTCCATTATATCTCCTAGGTCAGAGTGGGCAAAGCTATTTATAAAGTTGGCAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCGCGCACACTCTATTTACGAACAACACAAGCCGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTACGGTCCACAGGTAACTTATTTTTGGAGATTAACACCTGTAATTATTATTACTTGTTAGTTTTTTGGTTTGAGATTTCAGTTTTGAATTATGTCTATACATTTTTCTTGATATTGAAAGCCAGTAATCAAGCATCCCTAAAGCTTGATCTGATAAAGAATAGTTTTATTTTTATCTCAAGCATGCCTTGCACAGATGCGCTTTGTGCTTGAAGCATATATAAAAGAGTGACCTGGCAAAATTTCTGTTGAAATATTGATTTCATAATTAGCACATTTGGGGTTGCATGGTTCATATTCTTGACAACATGGCTGAAAAGGCTCTCTTGTCTTGTCAAGAAACCAATTTCAAAAGGTTAAGAGTGAAAAGAAGGATCATGAGTGAGTTTTCCTATGGCTAATAATGGCATCGAGGGGTATTTTTGCTACGATAGGCAAACATGAGGCTCAAAATAATATAGTAGTAGGTTGATACAGCGTGCGTTATGATATAAAGCACATAAAATTATCTTATACCAAGAGTTAGGTCAGGTATTGTTGTTACTACTAGTACAAGCCCAAGCCCACTAATAGAAGATTGCTGCGACTACTGATCTTCCCGTAGAGAAAATGTAGTCTTCCCCCACATAAAATTAGAGGAAAGGACAAAAGAAATCATATGCATTTGAAATGAATCACACTTCTATACATGAGTAGCATTGACCCCAATCTTGGCATATAACCATTTTGAAGCAATTGTAACAACTTTTTGTTGAGCTTTTAGGAAGTTATAGGAATTGTATTTCCACGACATATGGTTTCCGATCATTTCCACTCAACATAAAAAAAATAAATAAATCAAAACATGGAAAAAAAAGTTGTTTTGTCAGACTTTCAACAATCAAGTCTGCTGTATAAACACCTTGTTCAATGGTTCAATATACAGATAAAGTTCTGTTTTGCAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAGTTTTCTAAAAGATGAATACGCATTTCATTGTCAATGTACTGGTTGTTCAGAAGTCAATCTATCTGACATCGTCCTCAATGCTTTTCATTGTGTGAACCCAAATTGTTCTGGCGCAGTGTTGGAAAGCAGAGTACTTGAATGTGAAAAGCAGAAAATCAAACACCTAGCTGTTGCTGATAAAGTAAGCTACTTTGAGGGACATTTATCAATACTTAATTACTACTTTTTTTTTACATTATAAATATATGTAGAGTTGAGTGACTTGGCATTTCTGTGCTGTCACATATGTTGCTTAGCATTTAGGAGTTGGGAGCTTGGATATATGGTCCTATGTTTGAACTATTTTCTCCCTTTAAAACACTTCATTTTTTCAGGTTATCAAGAACGATGACATCTATGAAGTTTGTCTTCAATTTAACCAAAATGACGCTTCTATTCATATTCAACCTGGAGTCTGTTTGAAATGCAGTTCTTACCGTGATCTGGAGTCTTCACGTGCAACAGTTGATAAAGCCTTAATATGCATAAAAAGGTACACACTGTTCAATTTGGACCCTAATAACAGCTTTTCCCTCACCTTTGAAAATTATTCAGAACTACTATTGAATAGTTTCCAATTGGGGGCTAGCTAGATAAATACACCAGTTATCAATCCTGCATGAGCTGATAGTAAATATTAGATGGCTGCTTAATTTTTCAACAGTTTACAGACTGAAATATGGAAATGACAGGCTGCAGGATGCAATACTGTCAAAAGAAATTTCAAATACTTCCATTTCAGACGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAATAAGGTTATTGCAGAGGTGAGTTCAAGCCTTCACAAAAGTTCTTCATCCTAAGTACAGTTTTCATATGTTTGTTGGACTATTTATATTGGAAAAAAATTACACTAGTAGTTGTCCTATTAATTGTGAATTAGGACTAATAATTACATAGTCAAATAAAATAAAAATAAAGAGAATAAAGTAAAATCATGGAGAATCAAATCAGATATATTATGATTCTCCTACAATATCAAACTTGGCATGCATAATAGTATGACAAGATTCATGAAATGTTTGGCGTAGTTTTTTGTTTTGTTCTGCAAAAGCATTCTCCTGAAGCTTGGTTAAAAGATTTATTTAACTCAGAATATGCTAATCCAAACACAGTCAGAGATAGGATGAGTGAAACTTAATTTTTATGCTTTTTAAAATGTTATTAATGTTGTTAAGTGTCCAAGACTTGATAGTGTAAGTAGATCTCCTCCTCCTTTTTTCTCGGTGTGTTTGTGCGACCTCAATTGAAAGGCATGGACTGTGTTCGACAAACAAGGTCTCATGTTTTGAATATGACGATTTAACTTTCATTTTCTTGTCATGGTCTGCTGTTGCAGGCAGAAGACAACCTTGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCGGCGGATCATTGTAAAGCATCTAGTCAGGTAATTTTCTTTTTAACAAACCTACTATCTTAGTTTGGCTGGTTTCTGCCATTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGCGGGGGAGTAGAAGTTTGGTTATTGGCATATTTTTAGCTACTAGTATCTCTTTCTGAATAGCTAGGACTTGACAGTTTCCAAGTAACTTTTTTCGGCAGTGGAAATATAAATAATTCTTGGTGGAACTCACGAAATTGGCCTTCCTGTAGCGTTACACTGGAAATCATGGTGCATTTACAATGGATGCCTTGCTATGAGAATTAGCGTGATAACCAAGTGCATGTAACCATATGGAGAGGGAAATGACCTATGGTGCCGCTGAGAAGTGCAATGAGAATTAACGTGATAACCAACTGCACGTAGCCATATGGAGAGGGAAATGAAAAAATGGCTAGTTGCTGCATTTGGGATAGAGGGGAAGCGTGATCTAGTAGGCTCCACAAGTTTATGTGTTCATTAGGAGGAGCTATTATATACGTCCTGGGTAGAATTTGAGTGACTTGTGGTGCCATTGAGAAATGAGAGGTCTTTTAATGCACATAGCCATACAGGTCGTGAGCATTTTATCATGGGAATGTTTTTAGCTTGGGCTGTCTGATTTGTTGAGATTGACGATTGCAATTACAGATTCGTTGTTATTGAATTAAGTCTTGTAGAGCCATGGATGCACCCATAAGCAAGCTTTTGTTTGTTGTATTCTGTTTTGTTTGAGTGAATGCATTTCCCATATGGTCTTGTTATCAATCTAATCAGACTTTCCAAGAATGATGGTTAAAGTAATTCATTCTTTTTTCCGTTGCAGATTTTGGAGAAGATATATGATCCTGATGATATAGTTATTGCTTATGAACTTGTGAAGCTTTCATCCGTCCAACTTTACTTGGGTGACAATAGTGCTGTCAACAGCATTGGTCGAATAGGTGCTATTTTCTCACGTTATTATGGACTTCATGCAGACTTGGTCTTTCCTTATCTTCAGTACCTTAGGAGAGAAATTTAG

Protein sequence

>MS.gene049435.t1

METLKGAIPEKLKQAIRDSTVNTLSDTCFSLHNFFLHFDPFHQTMTQLADPSYALCGKSKEAALKYKQLGNQCFSNADYVKALDYYTQALRKAPFEVGEIENNLIATLYINRATVLHKMNLSVECLRDCDRALQICPSYSKAWYRRGKANIALGNNRDAICDLNIAKSVESSTGGKRQIECELKIILDQSKSTNIVVQPRQKENSLSTTGEMPQIKLQSVSVPDKGRGMVPPSDVSPGSLVHAEEPYAMVILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQIKAGGQMFMISTEDNYVLKNLPNNLAEYAAEVIQYNDCEQKIGNVTEHKHECQGVHWPAVLPSDIVLAGRLLAKFLSKNSSGDITSFVEKLELSHCYEHMPFESKLDSHLYAIVLLYCLKHSYGAMLAINGISISQVVIVISQIKVNCMTVVRLKSIDAHGLSDQSVGFPFHSSVHLTSNVEQVRVGKAIYKVGSLFNHSCQPNVHAYFLSRTLYLRTTQAVAAGCQLELSYGPQVGLWDCKDRQSFLKDEYAFHCQCTGCSEVNLSDIVLNAFHCVNPNCSGAVLESRVLECEKQKIKHLAVADKVIKNDDIYEVCLQFNQNDASIHIQPGVCLKCSSYRDLESSRATVDKALICIKRLQDAILSKEISNTSISDALRSLHLLRSNLHAYNKVIAEAEDNLAQAFCLVGELQLSADHCKASSQILEKIYDPDDIVIAYELVKLSSVQLYLGDNSAVNSIGRIGAIFSRYYGLHADLVFPYLQYLRREI