Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065393.t1 | XP_003624502.1 | 97.3 | 1023 | 27 | 1 | 10 | 1032 | 1 | 1022 | 0.00E+00 | 1994.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065393.t1 | P94078 | 73.4 | 1010 | 262 | 4 | 10 | 1018 | 1 | 1004 | 0.0e+00 | 1516.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065393.t1 | G7KX96 | 97.3 | 1023 | 27 | 1 | 10 | 1032 | 1 | 1022 | 0.0e+00 | 1994.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033714 | MS.gene065393 | PPI |
| MS.gene033712 | MS.gene065393 | PPI |
| MS.gene065392 | MS.gene065393 | PPI |
| MS.gene024279 | MS.gene065393 | PPI |
| MS.gene73391 | MS.gene065393 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065393.t1 | MTR_7g084040 | 97.263 | 1023 | 27 | 1 | 10 | 1032 | 1 | 1022 | 0.0 | 2066 |
| MS.gene065393.t1 | MTR_7g084030 | 68.281 | 1012 | 313 | 5 | 10 | 1018 | 46 | 1052 | 0.0 | 1454 |
| MS.gene065393.t1 | MTR_3g098650 | 67.632 | 1001 | 314 | 7 | 24 | 1017 | 17 | 1014 | 0.0 | 1444 |
| MS.gene065393.t1 | MTR_8g075330 | 58.992 | 1012 | 397 | 4 | 16 | 1017 | 15 | 1018 | 0.0 | 1277 |
| MS.gene065393.t1 | MTR_7g084030 | 68.719 | 812 | 249 | 3 | 10 | 820 | 1 | 808 | 0.0 | 1186 |
| MS.gene065393.t1 | MTR_6g008850 | 27.721 | 873 | 490 | 25 | 44 | 829 | 137 | 955 | 6.71e-89 | 310 |
| MS.gene065393.t1 | MTR_4g071680 | 26.690 | 873 | 486 | 26 | 44 | 829 | 137 | 942 | 1.96e-78 | 279 |
| MS.gene065393.t1 | MTR_3g013720 | 73.469 | 49 | 13 | 0 | 57 | 105 | 11 | 59 | 1.35e-18 | 81.3 |
| MS.gene065393.t1 | MTR_2g066850 | 47.872 | 94 | 44 | 1 | 827 | 915 | 458 | 551 | 5.13e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065393.t1 | AT3G26720 | 73.366 | 1010 | 262 | 4 | 10 | 1018 | 1 | 1004 | 0.0 | 1562 |
| MS.gene065393.t1 | AT3G26720 | 73.629 | 948 | 245 | 3 | 10 | 956 | 1 | 944 | 0.0 | 1479 |
| MS.gene065393.t1 | AT3G26720 | 73.812 | 947 | 243 | 3 | 10 | 955 | 1 | 943 | 0.0 | 1479 |
| MS.gene065393.t1 | AT3G26720 | 73.889 | 923 | 236 | 3 | 10 | 931 | 1 | 919 | 0.0 | 1446 |
| MS.gene065393.t1 | AT3G26720 | 73.861 | 922 | 236 | 3 | 10 | 930 | 1 | 918 | 0.0 | 1445 |
| MS.gene065393.t1 | AT5G13980 | 65.157 | 1016 | 336 | 7 | 10 | 1015 | 1 | 1008 | 0.0 | 1389 |
| MS.gene065393.t1 | AT5G13980 | 65.157 | 1016 | 336 | 7 | 10 | 1015 | 1 | 1008 | 0.0 | 1389 |
| MS.gene065393.t1 | AT5G13980 | 65.016 | 929 | 309 | 6 | 10 | 930 | 1 | 921 | 0.0 | 1280 |
| MS.gene065393.t1 | AT5G66150 | 57.797 | 1026 | 403 | 6 | 15 | 1017 | 16 | 1034 | 0.0 | 1233 |
| MS.gene065393.t1 | AT5G66150 | 57.838 | 1027 | 402 | 7 | 15 | 1017 | 16 | 1035 | 0.0 | 1230 |
| MS.gene065393.t1 | AT5G66150 | 55.882 | 748 | 299 | 7 | 294 | 1017 | 1 | 741 | 0.0 | 853 |
| MS.gene065393.t1 | AT5G14950 | 27.429 | 875 | 493 | 26 | 44 | 829 | 151 | 972 | 2.74e-87 | 305 |
Find 237 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTATTGGCTTGCATTTC+CGG | 0.117350 | 7.4:+23083228 | MS.gene065393:CDS |
| TTGTGCAGATTCGAGATTTC+AGG | 0.197419 | 7.4:+23085304 | MS.gene065393:intron |
| TGCATCTGCACTTGCTTTAT+TGG | 0.200055 | 7.4:+23080761 | MS.gene065393:CDS |
| TACAAGTAGGCCAGCTTTAA+AGG | 0.202361 | 7.4:+23080336 | MS.gene065393:CDS |
| TCATTCTTTCAGGTTAATTT+AGG | 0.202674 | 7.4:+23085696 | MS.gene065393:intron |
| AACCTGCTGATCAGATTTAA+TGG | 0.241905 | 7.4:-23084537 | None:intergenic |
| TGATGTTTCCCAACCTATTC+AGG | 0.255739 | 7.4:+23079079 | MS.gene065393:CDS |
| AGATAGAGCCAAACGATTAA+AGG | 0.256000 | 7.4:+23078832 | MS.gene065393:CDS |
| TGTCCTGCGCGGTCCGATAT+TGG | 0.263077 | 7.4:+23084665 | MS.gene065393:CDS |
| ACTTCATTTCAGATATTTAC+TGG | 0.278999 | 7.4:+23079005 | MS.gene065393:intron |
| ACCTGCTGGAAGCCTGTTAC+AGG | 0.280988 | 7.4:-23080816 | None:intergenic |
| ATGGACGCGACTTCATTAAA+AGG | 0.290746 | 7.4:+23085165 | MS.gene065393:CDS |
| AGATTAGTTTGGAAGGTAGA+AGG | 0.292289 | 7.4:+23088144 | MS.gene065393:CDS |
| AGGTTGTTTGGCAAGGTTCC+AGG | 0.308728 | 7.4:+23078867 | MS.gene065393:CDS |
| TGGAAAAGAAGAGATTAGTT+TGG | 0.318017 | 7.4:+23088133 | MS.gene065393:CDS |
| GCAGTTCAGGCTTACTTACT+TGG | 0.318307 | 7.4:+23078617 | MS.gene065393:CDS |
| CACCTATACGGTCAATTCTA+AGG | 0.318459 | 7.4:-23086365 | None:intergenic |
| GCTATCAATATGCTAATTCA+TGG | 0.319606 | 7.4:+23079624 | MS.gene065393:CDS |
| ACATAGATAAACTTGCGATT+TGG | 0.321410 | 7.4:-23077947 | None:intergenic |
| TCACATGCGAACTTGATCTT+TGG | 0.334210 | 7.4:-23080788 | None:intergenic |
| ACCGTTGCTGTTGGCTTTCA+CGG | 0.335617 | 7.4:+23086431 | MS.gene065393:CDS |
| AGTTCAACAACCAGCTTTGT+AGG | 0.342923 | 7.4:-23088213 | None:intergenic |
| TCTTGGTGGACCGCTCAGTT+GGG | 0.352125 | 7.4:+23085754 | MS.gene065393:CDS |
| AGGCTCCAGTGAAGAGTCTA+AGG | 0.354287 | 7.4:+23088167 | MS.gene065393:CDS |
| CTGATCATCCAAATGCATAT+TGG | 0.358385 | 7.4:+23080302 | MS.gene065393:CDS |
| AGAAAACTCTAGAGGTTGTT+TGG | 0.360019 | 7.4:+23078855 | MS.gene065393:CDS |
| CAATTTATCAAAGATGAGTT+TGG | 0.360039 | 7.4:+23078548 | MS.gene065393:CDS |
| TTTGCTGCCTCCACCATCTC+TGG | 0.360724 | 7.4:-23078107 | None:intergenic |
| GTCTTGGTGGACCGCTCAGT+TGG | 0.363453 | 7.4:+23085753 | MS.gene065393:CDS |
| AATATGCTAATTCATGGTTT+AGG | 0.365634 | 7.4:+23079630 | MS.gene065393:CDS |
| TAAAAGAACTCTACCTGAAT+AGG | 0.365941 | 7.4:-23079092 | None:intergenic |
| GTTTGGCCATTCTGCAGTTC+AGG | 0.369063 | 7.4:+23078604 | MS.gene065393:CDS |
| TAATCAAGAAAGAGCTGAAA+TGG | 0.371503 | 7.4:+23088113 | MS.gene065393:CDS |
| GTTAGAAGAGCGGTGTTGTT+TGG | 0.372444 | 7.4:-23086601 | None:intergenic |
| TTCGAGATTTCAGGACTGAT+TGG | 0.376321 | 7.4:+23085313 | MS.gene065393:CDS |
| GAGGACAGTAGCTTATATTA+AGG | 0.378777 | 7.4:-23081188 | None:intergenic |
| CTGCTGCAGGAACTGTTTGA+AGG | 0.383150 | 7.4:-23088278 | None:intergenic |
| TATGCAAAGCGGATTTCAAT+AGG | 0.386527 | 7.4:+23080638 | MS.gene065393:CDS |
| ACAGATTGTGAGGATATATA+AGG | 0.393438 | 7.4:+23084905 | MS.gene065393:intron |
| CTGATTGATCAGACTACTCT+TGG | 0.394062 | 7.4:+23078521 | MS.gene065393:CDS |
| ACCTGCTGATCAGATTTAAT+GGG | 0.394847 | 7.4:-23084536 | None:intergenic |
| CAAGTTTATCTATGTTGAAA+TGG | 0.396778 | 7.4:+23077955 | MS.gene065393:CDS |
| AATGGAGATTCGGACATTCT+TGG | 0.400784 | 7.4:+23088242 | MS.gene065393:CDS |
| ATTTAGCACCCTCACCTATA+CGG | 0.405622 | 7.4:-23086377 | None:intergenic |
| AACTTGTTCCAATGGAGATT+CGG | 0.406586 | 7.4:+23088232 | MS.gene065393:CDS |
| ACCACTCTTACCTTCTTGTT+AGG | 0.407090 | 7.4:-23087989 | None:intergenic |
| TTTCAAGGGAGGAATGAATC+AGG | 0.407807 | 7.4:+23080524 | MS.gene065393:CDS |
| AACAATGAGTGGTTACTATC+AGG | 0.407898 | 7.4:+23080369 | MS.gene065393:CDS |
| TGGCAAGGTTCCAGGTCCCT+TGG | 0.410907 | 7.4:+23078875 | MS.gene065393:CDS |
| TAACCAGTCCAATATGCATT+TGG | 0.411552 | 7.4:-23080310 | None:intergenic |
| GTATAGGTGAGGGTGCTAAA+TGG | 0.417846 | 7.4:+23086379 | MS.gene065393:CDS |
| GGCTGGCAGATTGATCCGTT+TGG | 0.418749 | 7.4:+23078587 | MS.gene065393:CDS |
| CATGTGATAAACCCTGTAAC+AGG | 0.420690 | 7.4:+23080804 | MS.gene065393:CDS |
| ACAAACTCTAATGGAGTTGT+TGG | 0.420725 | 7.4:-23077788 | None:intergenic |
| ACCAGCTTTGTAGGATCAAC+TGG | 0.421591 | 7.4:-23088204 | None:intergenic |
| TCAATCTGCCAGCCAACTCT+TGG | 0.422596 | 7.4:-23078578 | None:intergenic |
| TTTGCATCAGTGTAGATAGA+TGG | 0.423252 | 7.4:-23079853 | None:intergenic |
| GTTTATTCACTATGTCAATC+AGG | 0.425293 | 7.4:+23079664 | MS.gene065393:CDS |
| TCAGAAGCTACCTTGGCTAA+TGG | 0.425782 | 7.4:+23081213 | MS.gene065393:CDS |
| GACGGAGAAACAAACTCTAA+TGG | 0.431950 | 7.4:-23077797 | None:intergenic |
| TTAATCGTTTGGCTCTATCT+TGG | 0.432559 | 7.4:-23078829 | None:intergenic |
| TATTTGACCATCTACCAAAC+TGG | 0.432627 | 7.4:-23085781 | None:intergenic |
| ACAAGTAGGCCAGCTTTAAA+GGG | 0.433645 | 7.4:+23080337 | MS.gene065393:CDS |
| TCCCATTAAATCTGATCAGC+AGG | 0.434621 | 7.4:+23084535 | MS.gene065393:CDS |
| TATTTAGGCAGCAAGGCAAT+TGG | 0.434701 | 7.4:+23080496 | MS.gene065393:intron |
| CGATATAGAACTCTCGGTCT+TGG | 0.435660 | 7.4:+23085737 | MS.gene065393:CDS |
| TCGAGATTTCAGGACTGATT+GGG | 0.436029 | 7.4:+23085314 | MS.gene065393:CDS |
| AGGCCATCATCCACAGGTAT+AGG | 0.440290 | 7.4:-23085074 | None:intergenic |
| TCAGCTAACGCGTCAGTGTT+TGG | 0.440480 | 7.4:-23080548 | None:intergenic |
| AAGACTGGCTCACCTTTATG+AGG | 0.440774 | 7.4:+23087381 | MS.gene065393:CDS |
| CTTGGTGGACCGCTCAGTTG+GGG | 0.442323 | 7.4:+23085755 | MS.gene065393:CDS |
| TTCTGTGATATCATCACTCT+TGG | 0.442682 | 7.4:+23077919 | MS.gene065393:CDS |
| TGTGAGGATATATAAGGAAA+AGG | 0.447116 | 7.4:+23084911 | MS.gene065393:CDS |
| AAATAATTACAACCTCATAA+AGG | 0.448484 | 7.4:-23087393 | None:intergenic |
| AATCACATAATGTGGGCAAT+GGG | 0.449122 | 7.4:+23079590 | MS.gene065393:CDS |
| GCTGTTGGCTTTCACGGAGC+AGG | 0.451967 | 7.4:+23086437 | MS.gene065393:CDS |
| CTACTTTATTCCGCAGATGA+AGG | 0.452311 | 7.4:+23083687 | MS.gene065393:CDS |
| TGTATCTGCTGCCTTGGCTC+AGG | 0.455607 | 7.4:+23079245 | MS.gene065393:CDS |
| GCTCAATTCGTGGGTATCTC+AGG | 0.456024 | 7.4:+23084704 | MS.gene065393:CDS |
| TGACTTTGTATCTGCTGCCT+TGG | 0.457211 | 7.4:+23079239 | MS.gene065393:CDS |
| TGATGTACTTCATCCAATAT+CGG | 0.457448 | 7.4:-23084678 | None:intergenic |
| TTGTTTATAATCCTCTTGCT+TGG | 0.459312 | 7.4:+23081378 | MS.gene065393:CDS |
| GAAGTGAACCAACCCGTAGC+TGG | 0.459418 | 7.4:+23085342 | MS.gene065393:CDS |
| ACATTCTACACAGATTCTAA+TGG | 0.461165 | 7.4:+23085146 | MS.gene065393:CDS |
| ACTAATAATAGCATAGAAGT+TGG | 0.461610 | 7.4:+23083648 | MS.gene065393:CDS |
| ATCTCGAACGTGAATCCATC+AGG | 0.466466 | 7.4:-23079053 | None:intergenic |
| ATCTGTGTAGAATGTCTTGT+TGG | 0.467544 | 7.4:-23085138 | None:intergenic |
| GCAACGGTGAATATAATTCC+TGG | 0.467778 | 7.4:-23086416 | None:intergenic |
| ACCTGGTATTTCCAGATACA+AGG | 0.471130 | 7.4:+23086333 | MS.gene065393:intron |
| CTGCTGGGGACCTCAAGTAT+TGG | 0.471878 | 7.4:+23083215 | MS.gene065393:CDS |
| TTCCTTAGAATTGACCGTAT+AGG | 0.472302 | 7.4:+23086363 | MS.gene065393:CDS |
| TATTTACTGGGATATTTCCC+AGG | 0.474860 | 7.4:+23079018 | MS.gene065393:CDS |
| TAATTTGCAGGCAGAAGGCT+TGG | 0.477127 | 7.4:+23080737 | MS.gene065393:intron |
| CAAGAGTAGTCTGATCAATC+AGG | 0.477934 | 7.4:-23078520 | None:intergenic |
| GAACTCTACCTGAATAGGTT+GGG | 0.478148 | 7.4:-23079087 | None:intergenic |
| ATCAGGAGGATCATAATGCC+TGG | 0.478368 | 7.4:-23079036 | None:intergenic |
| TATGTAGGAACAGCCCCTGC+TGG | 0.480936 | 7.4:+23083199 | MS.gene065393:CDS |
| CAATCAGGTCAATGTAATGC+GGG | 0.481134 | 7.4:-23078505 | None:intergenic |
| TTAATGGGAAACGAGCCATT+TGG | 0.481967 | 7.4:-23084521 | None:intergenic |
| CTCAAAGTAATATTAGATAT+AGG | 0.489671 | 7.4:-23083151 | None:intergenic |
| TTTCCTTCCCAGAAGAGTCC+TGG | 0.490072 | 7.4:-23083111 | None:intergenic |
| ATTATATTCACCGTTGCTGT+TGG | 0.492362 | 7.4:+23086422 | MS.gene065393:CDS |
| ATACCTGTGGATGATGGCCT+TGG | 0.493634 | 7.4:+23085077 | MS.gene065393:CDS |
| CAGCACCATGATGCTGTTAG+TGG | 0.494009 | 7.4:+23080587 | MS.gene065393:CDS |
| TGCTGCAGGAACTGTTTGAA+GGG | 0.496123 | 7.4:-23088277 | None:intergenic |
| CCTCACTCTCATGATGATGT+TGG | 0.496579 | 7.4:+23077730 | MS.gene065393:CDS |
| ATAATCCTCTTGCTTGGACG+AGG | 0.496901 | 7.4:+23081384 | MS.gene065393:CDS |
| CTCACGTAACCCTTTAAAGC+TGG | 0.497153 | 7.4:-23080346 | None:intergenic |
| AAAGAAGAGATTAGTTTGGA+AGG | 0.497971 | 7.4:+23088137 | MS.gene065393:CDS |
| CCGGTATCTGTACCTCCCAT+TGG | 0.498659 | 7.4:+23083247 | MS.gene065393:CDS |
| GGGTAATAGTTTCCAGCTAC+GGG | 0.500717 | 7.4:-23085354 | None:intergenic |
| ATGTAGGAACAGCCCCTGCT+GGG | 0.502770 | 7.4:+23083200 | MS.gene065393:CDS |
| ATGGCGTCGTACACTTGGCC+AGG | 0.506930 | 7.4:+23086398 | MS.gene065393:CDS |
| CGGAAAAGTACTATTAAGAC+TGG | 0.508368 | 7.4:+23087366 | MS.gene065393:CDS |
| AAATAGAGCTGATGCTCCAC+AGG | 0.510798 | 7.4:+23085799 | MS.gene065393:CDS |
| AGAACTCTACCTGAATAGGT+TGG | 0.512423 | 7.4:-23079088 | None:intergenic |
| CATGATGATGTAAGAGGTGT+TGG | 0.512514 | 7.4:+23085977 | MS.gene065393:CDS |
| AAGAATGTCCGAATCTCCAT+TGG | 0.513779 | 7.4:-23088240 | None:intergenic |
| TGAAGAGTCTAAGGTGGTGA+GGG | 0.513966 | 7.4:+23088176 | MS.gene065393:CDS |
| TGTGATATCATCACTCTTGG+AGG | 0.514448 | 7.4:+23077922 | MS.gene065393:CDS |
| GCTAAATGGCGTCGTACACT+TGG | 0.514919 | 7.4:+23086393 | MS.gene065393:CDS |
| TGGGTAATAGTTTCCAGCTA+CGG | 0.515329 | 7.4:-23085355 | None:intergenic |
| TATAGAACTCTCGGTCTTGG+TGG | 0.519296 | 7.4:+23085740 | MS.gene065393:CDS |
| AGTATCAAGTCGTAAGCATA+CGG | 0.519696 | 7.4:+23083285 | MS.gene065393:CDS |
| ACTCTAGAGGTTGTTTGGCA+AGG | 0.521960 | 7.4:+23078860 | MS.gene065393:CDS |
| AGTCAAAGATCTTGTCAACT+CGG | 0.525179 | 7.4:+23078149 | MS.gene065393:CDS |
| ACTCTCATGATGATGTTGGT+TGG | 0.525408 | 7.4:+23077734 | MS.gene065393:CDS |
| CCAATGGGAGGTACAGATAC+CGG | 0.526896 | 7.4:-23083247 | None:intergenic |
| CTTCATTTCAGATATTTACT+GGG | 0.527545 | 7.4:+23079006 | MS.gene065393:intron |
| TTTCTTAATTTGCAGGCAGA+AGG | 0.528909 | 7.4:+23080732 | MS.gene065393:intron |
| GCATACGTCTTCCGTCCAAA+TGG | 0.530662 | 7.4:+23084506 | MS.gene065393:CDS |
| CCCTGTAACAGGCTTCCAGC+AGG | 0.531458 | 7.4:+23080815 | MS.gene065393:CDS |
| ACCAGTTGATCCTACAAAGC+TGG | 0.532090 | 7.4:+23088203 | MS.gene065393:CDS |
| CAATACTTGAGGTCCCCAGC+AGG | 0.532366 | 7.4:-23083214 | None:intergenic |
| TTCTTCTTGTACAGATTGTG+AGG | 0.533573 | 7.4:+23084895 | MS.gene065393:intron |
| TAATTCATGGTTTAGGCAGA+TGG | 0.534719 | 7.4:+23079637 | MS.gene065393:CDS |
| CACCGCTCTTCTAACTCTGC+AGG | 0.536765 | 7.4:+23086609 | MS.gene065393:CDS |
| ACATAGGTGCTGAAACCAAT+GGG | 0.537404 | 7.4:-23083262 | None:intergenic |
| AAATATGTCAAAGCATATGT+AGG | 0.537444 | 7.4:+23083184 | MS.gene065393:CDS |
| CCACATTATGTGATTCGTCC+TGG | 0.539153 | 7.4:-23079582 | None:intergenic |
| TTGCCAAGGCCATCATCCAC+AGG | 0.540002 | 7.4:-23085080 | None:intergenic |
| GTCAAAGATCTTGTCAACTC+GGG | 0.540144 | 7.4:+23078150 | MS.gene065393:CDS |
| GGGCCTATACCTGTGGATGA+TGG | 0.540711 | 7.4:+23085071 | MS.gene065393:CDS |
| CATCCAAATGCATATTGGAC+TGG | 0.541163 | 7.4:+23080307 | MS.gene065393:CDS |
| ACATTTATCAGCAATGCAAA+CGG | 0.541893 | 7.4:-23086017 | None:intergenic |
| AGATAAAATAAACGTGCACT+TGG | 0.542140 | 7.4:+23077705 | MS.gene065393:CDS |
| TGAAGAAGAACCAAGGGACC+TGG | 0.542740 | 7.4:-23078885 | None:intergenic |
| TGTCCAGGACTCTTCTGGGA+AGG | 0.542814 | 7.4:+23083108 | MS.gene065393:CDS |
| ACAAAGCACAGCCACTAAAA+CGG | 0.545979 | 7.4:-23077632 | None:intergenic |
| TCCTCCGTCAGAAGCTACCT+TGG | 0.546594 | 7.4:+23081206 | MS.gene065393:CDS |
| GAATCACATAATGTGGGCAA+TGG | 0.546667 | 7.4:+23079589 | MS.gene065393:CDS |
| TTTGGTAAGATTCCAAGAGT+TGG | 0.547022 | 7.4:+23078566 | MS.gene065393:CDS |
| GTAAGATTCCAAGAGTTGGC+TGG | 0.547281 | 7.4:+23078570 | MS.gene065393:CDS |
| GGTTGTTGAACTTGTTCCAA+TGG | 0.548030 | 7.4:+23088224 | MS.gene065393:CDS |
| CACCACCTTAGACTCTTCAC+TGG | 0.548230 | 7.4:-23088172 | None:intergenic |
| TTCTTGATATTTAGGCAGCA+AGG | 0.550166 | 7.4:+23080489 | MS.gene065393:intron |
| AGGCATTATGATCCTCCTGA+TGG | 0.552489 | 7.4:+23079038 | MS.gene065393:CDS |
| TGGACGCGACTTCATTAAAA+GGG | 0.554065 | 7.4:+23085166 | MS.gene065393:CDS |
| ATACTTGAGGTCCCCAGCAG+GGG | 0.555820 | 7.4:-23083212 | None:intergenic |
| TACATCAACAGCTCAATTCG+TGG | 0.556275 | 7.4:+23084694 | MS.gene065393:CDS |
| TGATTGATCAGACTACTCTT+GGG | 0.560165 | 7.4:+23078522 | MS.gene065393:CDS |
| TAATCCTCTTGCTTGGACGA+GGG | 0.560961 | 7.4:+23081385 | MS.gene065393:CDS |
| AATACTTGAGGTCCCCAGCA+GGG | 0.563201 | 7.4:-23083213 | None:intergenic |
| GGCTTACTTACTTGGAGCTG+AGG | 0.563211 | 7.4:+23078625 | MS.gene065393:CDS |
| CCTGCTGGAAGCCTGTTACA+GGG | 0.563293 | 7.4:-23080815 | None:intergenic |
| AGATAGCGATATAGAACTCT+CGG | 0.564919 | 7.4:+23085731 | MS.gene065393:CDS |
| ACCAGGCCTCACCTGAGCCA+AGG | 0.567720 | 7.4:-23079256 | None:intergenic |
| CTGTGCCACTAACAGCATCA+TGG | 0.569031 | 7.4:-23080592 | None:intergenic |
| GCCACAGGTTTCCACTGCAG+AGG | 0.569097 | 7.4:+23083081 | MS.gene065393:intron |
| GAGTAATAACTTCTTTGCCA+AGG | 0.569342 | 7.4:-23085094 | None:intergenic |
| CTTACGACTTGATACTACAT+AGG | 0.571591 | 7.4:-23083278 | None:intergenic |
| TGGGGATAATAAAGATTCCC+AGG | 0.573380 | 7.4:+23083960 | MS.gene065393:CDS |
| CCAGGACGAATCACATAATG+TGG | 0.574825 | 7.4:+23079582 | MS.gene065393:CDS |
| TCCTCCCTCGTCCAAGCAAG+AGG | 0.575053 | 7.4:-23081389 | None:intergenic |
| ATGCTTCATGATGATGTAAG+AGG | 0.581510 | 7.4:+23085971 | MS.gene065393:CDS |
| AATAGTTTCCAGCTACGGGT+TGG | 0.584416 | 7.4:-23085350 | None:intergenic |
| GGTGTTGTTTGGTAAACTGT+AGG | 0.586286 | 7.4:-23086590 | None:intergenic |
| TGAACTGCAGAATGGCCAAA+CGG | 0.588119 | 7.4:-23078602 | None:intergenic |
| GTTTCTAGGCTAATGTGACC+AGG | 0.588358 | 7.4:+23079564 | MS.gene065393:intron |
| TTGGTGGACCGCTCAGTTGG+GGG | 0.588993 | 7.4:+23085756 | MS.gene065393:CDS |
| TCATATTTCAATTATCTCAA+CGG | 0.590231 | 7.4:+23083605 | MS.gene065393:CDS |
| TGGACGGAAGACGTATGCCC+CGG | 0.590238 | 7.4:-23084501 | None:intergenic |
| GCTGCAGGAACTGTTTGAAG+GGG | 0.591936 | 7.4:-23088276 | None:intergenic |
| TACATAGGTGCTGAAACCAA+TGG | 0.592627 | 7.4:-23083263 | None:intergenic |
| TCAACGGAGTTCAGATCAGA+AGG | 0.595112 | 7.4:+23083621 | MS.gene065393:CDS |
| CATCACTGTGGTGAGTGAGT+TGG | 0.595389 | 7.4:-23077584 | None:intergenic |
| CACAGTGATGATGATCAATA+CGG | 0.600911 | 7.4:+23077597 | MS.gene065393:CDS |
| TCAGGAGGATCATAATGCCT+GGG | 0.602840 | 7.4:-23079035 | None:intergenic |
| TGCATTGCTGATAAATGTGA+AGG | 0.602938 | 7.4:+23086022 | MS.gene065393:CDS |
| GTGAAGAGTCTAAGGTGGTG+AGG | 0.606014 | 7.4:+23088175 | MS.gene065393:CDS |
| ATGAATTAGCATATTGATAG+CGG | 0.606108 | 7.4:-23079622 | None:intergenic |
| AGTAAGCCTGAACTGCAGAA+TGG | 0.616488 | 7.4:-23078610 | None:intergenic |
| AGTAGCTTATATTAAGGAGA+GGG | 0.617083 | 7.4:-23081182 | None:intergenic |
| TTAGTTTGGAAGGTAGAAGG+AGG | 0.619123 | 7.4:+23088147 | MS.gene065393:CDS |
| TCCTCTTGCTTGGACGAGGG+AGG | 0.619804 | 7.4:+23081388 | MS.gene065393:CDS |
| AGAATTGACCGTATAGGTGA+GGG | 0.620881 | 7.4:+23086369 | MS.gene065393:CDS |
| TAGAATTGACCGTATAGGTG+AGG | 0.622322 | 7.4:+23086368 | MS.gene065393:CDS |
| ATAGATTGGGCCTATACCTG+TGG | 0.623623 | 7.4:+23085064 | MS.gene065393:intron |
| GAGTCTAAGGTGGTGAGGGG+AGG | 0.623763 | 7.4:+23088180 | MS.gene065393:CDS |
| GCCAAGGTAGCTTCTGACGG+AGG | 0.624916 | 7.4:-23081207 | None:intergenic |
| TCCGTGAAAGCCAACAGCAA+CGG | 0.625680 | 7.4:-23086432 | None:intergenic |
| TGTAGGAACAGCCCCTGCTG+GGG | 0.627495 | 7.4:+23083201 | MS.gene065393:CDS |
| ACATCAACAGCTCAATTCGT+GGG | 0.627777 | 7.4:+23084695 | MS.gene065393:CDS |
| GTATCAAGTCGTAAGCATAC+GGG | 0.629566 | 7.4:+23083286 | MS.gene065393:CDS |
| TTAGCCAAGGTAGCTTCTGA+CGG | 0.631493 | 7.4:-23081210 | None:intergenic |
| TACTTGTGAAGAAGAACCAA+GGG | 0.636369 | 7.4:-23078891 | None:intergenic |
| ATTAAAGGAGAAAACTCTAG+AGG | 0.636570 | 7.4:+23078847 | MS.gene065393:CDS |
| TGGGAAACGAGCCATTTGGA+CGG | 0.639577 | 7.4:-23084517 | None:intergenic |
| GAGTCTATGCCAGAAAATGT+TGG | 0.639708 | 7.4:-23086565 | None:intergenic |
| CAGTAGCTTATATTAAGGAG+AGG | 0.640047 | 7.4:-23081183 | None:intergenic |
| ACCGTTGATCAGTACTACGT+TGG | 0.642186 | 7.4:+23077763 | MS.gene065393:CDS |
| GAAATGCAAGCCAATACTTG+AGG | 0.645892 | 7.4:-23083225 | None:intergenic |
| GAAGAGTCTAAGGTGGTGAG+GGG | 0.652985 | 7.4:+23088177 | MS.gene065393:CDS |
| TCAATCAGGTCAATGTAATG+CGG | 0.655563 | 7.4:-23078506 | None:intergenic |
| CCAACATCATCATGAGAGTG+AGG | 0.655998 | 7.4:-23077730 | None:intergenic |
| ACTACATGTAAAGGTTGGAG+AGG | 0.656333 | 7.4:+23087919 | MS.gene065393:intron |
| CATCCAATATCGGACCGCGC+AGG | 0.657281 | 7.4:-23084668 | None:intergenic |
| AATATGCAGCTAATGAGCAG+TGG | 0.661561 | 7.4:+23079875 | MS.gene065393:CDS |
| TTACTTGTGAAGAAGAACCA+AGG | 0.666220 | 7.4:-23078892 | None:intergenic |
| ATCACATAATGTGGGCAATG+GGG | 0.676792 | 7.4:+23079591 | MS.gene065393:CDS |
| AATAGCATAGAAGTTGGACA+AGG | 0.679887 | 7.4:+23083654 | MS.gene065393:CDS |
| TCCAACGTAGTACTGATCAA+CGG | 0.683225 | 7.4:-23077764 | None:intergenic |
| CTCCAGTGAAGAGTCTAAGG+TGG | 0.687062 | 7.4:+23088170 | MS.gene065393:CDS |
| CAGGACGAATCACATAATGT+GGG | 0.687103 | 7.4:+23079583 | MS.gene065393:CDS |
| CAGGTCAATGTAATGCGGGG+TGG | 0.688828 | 7.4:-23078501 | None:intergenic |
| ATAGCATAGAAGTTGGACAA+GGG | 0.691079 | 7.4:+23083655 | MS.gene065393:CDS |
| AATCAGGTCAATGTAATGCG+GGG | 0.692814 | 7.4:-23078504 | None:intergenic |
| GGTTACGTGAGAACAATGAG+TGG | 0.698149 | 7.4:+23080358 | MS.gene065393:CDS |
| TCGAACGTGAATCCATCAGG+AGG | 0.700399 | 7.4:-23079050 | None:intergenic |
| TACCTGCAGAGTTAGAAGAG+CGG | 0.704633 | 7.4:-23086611 | None:intergenic |
| TGGTATGTGCATGCATGACG+AGG | 0.712035 | 7.4:+23078478 | MS.gene065393:CDS |
| TAGCTGCTGATTATGCAAAG+CGG | 0.723096 | 7.4:+23080627 | MS.gene065393:CDS |
| GATTTCAATAGGCTATGACG+AGG | 0.742371 | 7.4:+23080649 | MS.gene065393:CDS |
| TAGGTGCTGAAACCAATGGG+AGG | 0.751093 | 7.4:-23083259 | None:intergenic |
| CGTATTGATCATCATCACTG+TGG | 0.752731 | 7.4:-23077596 | None:intergenic |
| TAGAATACAACATCACACAG+AGG | 0.780508 | 7.4:+23077674 | MS.gene065393:CDS |
| AGTGATGATGATCAATACGG+TGG | 0.815070 | 7.4:+23077600 | MS.gene065393:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 23077577 | 23088320 | 23077577 | ID=MS.gene065393 |
| chr7.4 | mRNA | 23077577 | 23088320 | 23077577 | ID=MS.gene065393.t1;Parent=MS.gene065393 |
| chr7.4 | exon | 23077577 | 23077804 | 23077577 | ID=MS.gene065393.t1.exon1;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23077577 | 23077804 | 23077577 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23077893 | 23077976 | 23077893 | ID=MS.gene065393.t1.exon2;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23077893 | 23077976 | 23077893 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23078099 | 23078187 | 23078099 | ID=MS.gene065393.t1.exon3;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23078099 | 23078187 | 23078099 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23078472 | 23078646 | 23078472 | ID=MS.gene065393.t1.exon4;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23078472 | 23078646 | 23078472 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23078791 | 23078910 | 23078791 | ID=MS.gene065393.t1.exon5;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23078791 | 23078910 | 23078791 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23079017 | 23079100 | 23079017 | ID=MS.gene065393.t1.exon6;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23079017 | 23079100 | 23079017 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23079195 | 23079266 | 23079195 | ID=MS.gene065393.t1.exon7;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23079195 | 23079266 | 23079195 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23079572 | 23079685 | 23079572 | ID=MS.gene065393.t1.exon8;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23079572 | 23079685 | 23079572 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23079823 | 23079923 | 23079823 | ID=MS.gene065393.t1.exon9;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23079823 | 23079923 | 23079823 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23080297 | 23080390 | 23080297 | ID=MS.gene065393.t1.exon10;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23080297 | 23080390 | 23080297 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23080503 | 23080670 | 23080503 | ID=MS.gene065393.t1.exon11;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23080503 | 23080670 | 23080503 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23080747 | 23080836 | 23080747 | ID=MS.gene065393.t1.exon12;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23080747 | 23080836 | 23080747 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23081180 | 23081245 | 23081180 | ID=MS.gene065393.t1.exon13;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23081180 | 23081245 | 23081180 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23081371 | 23081427 | 23081371 | ID=MS.gene065393.t1.exon14;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23081371 | 23081427 | 23081371 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23083088 | 23083307 | 23083088 | ID=MS.gene065393.t1.exon15;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23083088 | 23083307 | 23083088 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23083604 | 23083743 | 23083604 | ID=MS.gene065393.t1.exon16;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23083604 | 23083743 | 23083604 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23083913 | 23083981 | 23083913 | ID=MS.gene065393.t1.exon17;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23083913 | 23083981 | 23083913 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23084497 | 23084556 | 23084497 | ID=MS.gene065393.t1.exon18;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23084497 | 23084556 | 23084497 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23084654 | 23084725 | 23084654 | ID=MS.gene065393.t1.exon19;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23084654 | 23084725 | 23084654 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23084909 | 23084956 | 23084909 | ID=MS.gene065393.t1.exon20;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23084909 | 23084956 | 23084909 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23085068 | 23085187 | 23085068 | ID=MS.gene065393.t1.exon21;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23085068 | 23085187 | 23085068 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23085312 | 23085377 | 23085312 | ID=MS.gene065393.t1.exon22;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23085312 | 23085377 | 23085312 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23085708 | 23085820 | 23085708 | ID=MS.gene065393.t1.exon23;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23085708 | 23085820 | 23085708 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23085967 | 23086051 | 23085967 | ID=MS.gene065393.t1.exon24;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23085967 | 23086051 | 23085967 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23086348 | 23086458 | 23086348 | ID=MS.gene065393.t1.exon25;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23086348 | 23086458 | 23086348 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23086535 | 23086630 | 23086535 | ID=MS.gene065393.t1.exon26;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23086535 | 23086630 | 23086535 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23087355 | 23087402 | 23087355 | ID=MS.gene065393.t1.exon27;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23087355 | 23087402 | 23087355 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23087932 | 23088000 | 23087932 | ID=MS.gene065393.t1.exon28;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23087932 | 23088000 | 23087932 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| chr7.4 | exon | 23088081 | 23088320 | 23088081 | ID=MS.gene065393.t1.exon29;Parent=MS.gene065393.t1 |
| chr7.4 | CDS | 23088081 | 23088320 | 23088081 | ID=cds.MS.gene065393.t1;Parent=MS.gene065393.t1 |
| Gene Sequence |
| Protein sequence |
