AlfalfaGEDB | MS.gene065826

M. sativa cultivar XinJiangDaYe / MS.gene065826

KEGG: -
GO: -
PFAM: PF14541.9 PF14543.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065826.t1	XP_013468904.1	99.7	317	1	0	1	317	112	428	1.20E-184	655.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065826.t1	Q9S9K4	50.8	315	148	4	3	317	118	425	2.2e-91	337.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065826.t1	A0A072VMV4	99.7	317	1	0	1	317	112	428	8.5e-185	655.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049378	MS.gene065826	0.82894	6.80E-55	-1.69E-46
MS.gene050201	MS.gene065826	0.805681	1.19E-49	-1.69E-46
MS.gene050226	MS.gene065826	0.806912	6.53E-50	-1.69E-46
MS.gene050227	MS.gene065826	0.82662	2.45E-54	-1.69E-46
MS.gene050228	MS.gene065826	0.825907	3.63E-54	-1.69E-46
MS.gene050330	MS.gene065826	-0.818898	1.54E-52	-1.69E-46
MS.gene050558	MS.gene065826	0.806853	6.72E-50	-1.69E-46
MS.gene050719	MS.gene065826	0.80552	1.28E-49	-1.69E-46
MS.gene050721	MS.gene065826	0.800758	1.24E-48	-1.69E-46
MS.gene052176	MS.gene065826	0.868533	6.08E-66	-1.69E-46
MS.gene052389	MS.gene065826	0.851268	9.91E-61	-1.69E-46
MS.gene053811	MS.gene065826	0.806905	6.55E-50	-1.69E-46
MS.gene054468	MS.gene065826	0.845266	4.52E-59	-1.69E-46
MS.gene054930	MS.gene065826	0.81287	3.41E-51	-1.69E-46
MS.gene057026	MS.gene065826	0.808569	2.90E-50	-1.69E-46
MS.gene058739	MS.gene065826	0.812075	5.09E-51	-1.69E-46
MS.gene061040	MS.gene065826	-0.82738	1.62E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065826.t1	MTR_1g078240	99.685	317	1	0	1	317	112	428	0.0	654
MS.gene065826.t1	MTR_1g078240	99.371	318	1	1	1	317	112	429	0.0	649
MS.gene065826.t1	MTR_1g078240	100.000	268	0	0	1	268	112	379	0.0	552
MS.gene065826.t1	MTR_7g080230	68.454	317	99	1	1	317	44	359	8.46e-165	464
MS.gene065826.t1	MTR_7g080230	68.454	317	99	1	1	317	114	429	4.66e-163	463
MS.gene065826.t1	MTR_7g021510	55.486	319	139	2	1	317	115	432	4.42e-125	367
MS.gene065826.t1	MTR_7g102750	40.248	323	180	5	1	317	124	439	2.06e-74	237
MS.gene065826.t1	MTR_2g084550	41.176	323	178	5	1	317	120	436	3.85e-72	231
MS.gene065826.t1	MTR_4g056420	39.009	323	184	6	1	317	120	435	4.85e-72	230
MS.gene065826.t1	MTR_1g061940	39.144	327	180	8	1	317	126	443	5.64e-71	228
MS.gene065826.t1	MTR_7g102750	39.437	284	165	4	1	278	124	406	1.12e-62	205
MS.gene065826.t1	MTR_0050s0050	48.800	125	62	2	1	124	4	127	1.93e-33	121
MS.gene065826.t1	MTR_5g016260	31.804	327	181	15	6	317	131	430	1.03e-29	119
MS.gene065826.t1	MTR_5g016260	31.804	327	181	15	6	317	131	430	1.94e-29	118
MS.gene065826.t1	MTR_4g095270	31.741	293	165	13	41	317	149	422	5.05e-26	108
MS.gene065826.t1	MTR_4g095270	31.741	293	165	13	41	317	149	422	1.13e-25	107
MS.gene065826.t1	MTR_4g023650	26.866	335	200	11	5	317	107	418	1.74e-22	97.4
MS.gene065826.t1	MTR_5g072060	40.816	147	74	5	35	178	384	520	1.84e-22	98.2
MS.gene065826.t1	MTR_1g029810	26.524	328	207	13	5	317	100	408	1.64e-21	94.4
MS.gene065826.t1	MTR_1g029810	26.524	328	207	13	5	317	100	408	2.64e-21	94.0
MS.gene065826.t1	MTR_5g080890	26.398	322	201	13	5	313	128	426	7.07e-21	92.8
MS.gene065826.t1	MTR_4g007740	28.571	315	181	14	19	315	186	474	1.30e-20	92.4
MS.gene065826.t1	MTR_5g080960	26.087	322	202	13	5	313	128	426	1.44e-19	89.0
MS.gene065826.t1	MTR_3g096930	25.455	330	200	13	5	314	127	430	1.76e-18	85.9
MS.gene065826.t1	MTR_8g038280	26.769	325	198	13	5	313	128	428	2.85e-18	85.1
MS.gene065826.t1	MTR_2g105300	26.087	322	204	12	5	313	77	377	5.07e-18	84.0
MS.gene065826.t1	MTR_8g096990	27.385	325	190	16	6	313	129	424	5.17e-18	84.3
MS.gene065826.t1	MTR_3g097150	28.395	324	191	16	5	313	144	441	1.90e-17	82.8
MS.gene065826.t1	MTR_3g087780	25.857	321	215	11	2	317	5	307	1.95e-17	82.4
MS.gene065826.t1	MTR_3g028120	27.829	327	200	13	5	317	131	435	2.34e-17	82.4
MS.gene065826.t1	MTR_3g087780	25.857	321	215	11	2	317	41	343	2.50e-17	82.4
MS.gene065826.t1	MTR_3g087780	25.857	321	215	11	2	317	147	449	4.45e-17	82.0
MS.gene065826.t1	MTR_3g053710	28.875	329	187	14	5	313	160	461	5.12e-17	81.6
MS.gene065826.t1	MTR_2g063110	24.768	323	213	12	8	314	196	504	8.09e-17	81.3
MS.gene065826.t1	MTR_2g028190	27.844	334	184	14	5	313	145	446	1.02e-16	80.9
MS.gene065826.t1	MTR_8g075010	25.077	323	208	13	1	315	150	446	1.15e-16	80.9
MS.gene065826.t1	MTR_5g091130	27.545	334	197	15	6	313	234	548	1.40e-16	80.5
MS.gene065826.t1	MTR_2g059460	28.395	324	192	17	5	313	101	399	2.03e-16	79.7
MS.gene065826.t1	MTR_5g008070	27.778	324	192	16	5	313	123	419	3.03e-16	79.3
MS.gene065826.t1	MTR_4g023630	26.957	345	187	17	5	317	107	418	1.60e-15	77.0
MS.gene065826.t1	MTR_5g038360	28.308	325	192	13	5	313	130	429	1.88e-15	77.0
MS.gene065826.t1	MTR_5g061690	24.458	323	214	11	2	317	10	309	7.24e-15	75.1
MS.gene065826.t1	MTR_5g061690	24.458	323	214	11	2	317	149	448	1.17e-14	74.7
MS.gene065826.t1	MTR_8g094590	25.382	327	203	15	5	313	116	419	1.57e-14	74.3
MS.gene065826.t1	MTR_3g046300	29.619	341	182	20	6	314	140	454	2.93e-14	73.6
MS.gene065826.t1	MTR_2g067830	24.847	326	203	12	5	313	99	399	4.76e-14	72.8
MS.gene065826.t1	MTR_6g084710	26.962	293	179	12	41	313	268	545	1.02e-13	72.0
MS.gene065826.t1	MTR_8g038250	24.540	326	195	14	14	313	108	408	6.50e-13	69.3
MS.gene065826.t1	MTR_8g103880	24.214	318	199	11	4	308	157	445	7.26e-13	69.3
MS.gene065826.t1	MTR_1g060750	25.000	320	212	12	2	314	72	370	6.48e-12	66.2
MS.gene065826.t1	MTR_0036s0110	26.300	327	202	14	2	313	133	435	8.61e-12	65.9
MS.gene065826.t1	MTR_6g085010	24.214	318	205	13	5	314	198	487	1.64e-11	65.1
MS.gene065826.t1	MTR_0036s0070	27.077	325	192	17	2	314	129	420	2.06e-11	64.7
MS.gene065826.t1	MTR_2g022480	26.180	233	142	8	102	305	179	410	2.23e-11	64.7
MS.gene065826.t1	MTR_4g109760	26.316	323	195	14	6	313	97	391	2.70e-11	64.3
MS.gene065826.t1	MTR_2g022490	27.039	233	140	8	102	305	173	404	6.88e-11	63.2
MS.gene065826.t1	MTR_3g014290	26.250	320	198	16	4	312	118	410	8.28e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065826.t1	AT1G05840	57.729	317	133	1	1	317	122	437	1.32e-133	389
MS.gene065826.t1	AT5G36260	53.333	315	143	3	3	317	122	432	1.43e-120	355
MS.gene065826.t1	AT3G02740	52.681	317	146	3	1	317	51	363	6.42e-114	336
MS.gene065826.t1	AT3G02740	52.681	317	146	3	1	317	126	438	3.99e-113	336
MS.gene065826.t1	AT1G65240	50.794	315	148	4	3	317	118	425	2.46e-111	331
MS.gene065826.t1	AT2G36670	38.820	322	185	4	1	317	76	390	8.67e-72	229
MS.gene065826.t1	AT2G36670	38.820	322	185	4	1	317	76	390	8.67e-72	229
MS.gene065826.t1	AT5G22850	39.938	323	182	5	1	317	123	439	2.17e-71	229
MS.gene065826.t1	AT2G36670	38.820	322	185	4	1	317	142	456	3.38e-71	229
MS.gene065826.t1	AT2G36670	38.820	322	185	4	1	317	147	461	3.49e-71	229
MS.gene065826.t1	AT1G08210	38.820	322	184	7	1	317	126	439	1.32e-63	209
MS.gene065826.t1	AT1G08210	38.820	322	184	7	1	317	160	473	3.04e-63	209
MS.gene065826.t1	AT1G08210	38.820	322	184	7	1	317	174	487	6.53e-63	208
MS.gene065826.t1	AT1G08210	36.337	344	189	8	1	317	126	466	1.19e-58	196
MS.gene065826.t1	AT5G43100	28.875	329	187	15	6	317	118	416	7.54e-26	107
MS.gene065826.t1	AT5G43100	28.875	329	187	16	6	317	118	416	1.88e-25	107
MS.gene065826.t1	AT2G17760	29.321	324	194	13	1	315	149	446	6.34e-24	102
MS.gene065826.t1	AT4G33490	28.221	326	196	14	5	313	102	406	8.50e-24	101
MS.gene065826.t1	AT3G50050	29.755	326	190	14	6	317	135	435	1.10e-23	101
MS.gene065826.t1	AT3G12700	28.421	285	170	10	38	306	182	448	4.98e-23	99.4
MS.gene065826.t1	AT3G25700	28.190	337	202	13	4	315	125	446	1.36e-21	95.1
MS.gene065826.t1	AT1G44130	24.540	326	209	12	6	315	92	396	5.16e-19	87.4
MS.gene065826.t1	AT3G42550	32.418	182	98	6	150	317	218	388	6.18e-19	87.0
MS.gene065826.t1	AT5G10080	25.155	322	212	11	2	314	148	449	8.88e-19	87.0
MS.gene065826.t1	AT3G54400	26.154	325	196	15	5	315	127	421	2.09e-17	82.8
MS.gene065826.t1	AT4G33490	28.223	287	172	12	5	275	99	367	2.35e-17	82.4
MS.gene065826.t1	AT2G23945	26.935	323	200	13	5	311	139	441	1.01e-15	77.8
MS.gene065826.t1	AT3G59080	31.004	229	131	10	5	214	211	431	1.37e-14	74.7
MS.gene065826.t1	AT3G51330	28.483	323	194	14	3	313	151	448	4.50e-14	72.8
MS.gene065826.t1	AT3G51330	28.483	323	194	14	3	313	151	448	4.83e-14	73.2
MS.gene065826.t1	AT1G25510	24.688	320	202	12	5	314	189	479	5.42e-14	72.8
MS.gene065826.t1	AT4G35880	23.547	327	212	15	1	317	152	450	5.98e-14	72.8
MS.gene065826.t1	AT5G37540	24.198	343	200	14	4	315	122	435	6.82e-14	72.4
MS.gene065826.t1	AT5G10770	23.975	317	211	11	5	313	174	468	9.97e-14	72.0
MS.gene065826.t1	AT1G77480	26.433	314	198	12	17	313	117	414	4.85e-13	69.7
MS.gene065826.t1	AT1G77480	26.433	314	198	12	17	313	117	414	5.19e-13	69.7
MS.gene065826.t1	AT3G51360	24.024	333	204	13	1	317	9	308	8.28e-13	68.6
MS.gene065826.t1	AT3G51360	24.024	333	204	13	1	317	9	308	8.28e-13	68.6
MS.gene065826.t1	AT3G51360	24.024	333	204	13	1	317	51	350	9.17e-13	68.9
MS.gene065826.t1	AT3G51360	24.024	333	204	13	1	317	135	434	9.39e-13	68.9
MS.gene065826.t1	AT2G03200	26.190	336	191	16	5	313	148	453	1.04e-12	68.9
MS.gene065826.t1	AT3G51360	24.024	333	204	13	1	317	145	444	1.23e-12	68.6
MS.gene065826.t1	AT5G33340	26.875	320	202	12	5	313	131	429	1.76e-12	68.2
MS.gene065826.t1	AT1G79720	25.915	328	198	14	5	312	174	476	1.87e-12	68.2
MS.gene065826.t1	AT4G30030	26.335	281	178	10	41	311	151	412	1.01e-11	65.9
MS.gene065826.t1	AT1G09750	26.129	310	192	15	17	312	156	442	2.44e-11	64.7
MS.gene065826.t1	AT4G35880	25.094	267	170	13	1	258	152	397	2.47e-11	64.7
MS.gene065826.t1	AT2G39710	26.071	280	159	14	4	253	101	362	2.95e-11	64.3
MS.gene065826.t1	AT2G35615	25.000	332	207	13	5	313	126	438	8.10e-11	63.2

Find 85 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGGAGTTGTTCTGACTTT+TGG	0.238222	1.3:-56030944	None:intergenic
GATTAATGAACATACATATT+TGG	0.242714	1.3:-56030971	None:intergenic
GAAGCCCTTGATGGAATAAT+TGG	0.245572	1.3:+56030794	MS.gene065826:CDS
CCCTCGGATATATTTGATTC+TGG	0.259620	1.3:+56032926	MS.gene065826:CDS
TGTCCTTTCCATCCTTAGTT+TGG	0.271260	1.3:-56034576	None:intergenic
GATATATTTGATTCTGGAAA+TGG	0.285563	1.3:+56032932	MS.gene065826:CDS
TGACTATCTGTTCCAATATA+AGG	0.288332	1.3:+56034102	MS.gene065826:CDS
CTTGATGGAATAATTGGTTT+TGG	0.295754	1.3:+56030800	MS.gene065826:CDS
CTTGTACGATCTTGAGAATA+TGG	0.302586	1.3:+56038029	MS.gene065826:CDS
TCTCCATAAGTTATGCTATA+GGG	0.307360	1.3:-56030272	None:intergenic
GTCCTTTCCATCCTTAGTTT+GGG	0.310111	1.3:-56034575	None:intergenic
ACATATGATGGTCCGATTCC+TGG	0.332528	1.3:+56030227	MS.gene065826:CDS
ATGCGAGCTAATTTCAATTC+AGG	0.348914	1.3:-56033118	None:intergenic
GGAAAGGACATGACACTTCT+TGG	0.353144	1.3:+56034589	MS.gene065826:CDS
AAGTTCATACCACCTTATAT+TGG	0.354647	1.3:-56034114	None:intergenic
CAAATACCTTTGGAATTAGT+TGG	0.360512	1.3:-56033015	None:intergenic
AATATTTGCCATAGGGGAAT+TGG	0.388793	1.3:+56030916	MS.gene065826:CDS
TATTCCATCAAGGGCTTCTT+CGG	0.390964	1.3:-56030789	None:intergenic
TAGCCTGGTGTCCGATGTAT+TGG	0.397365	1.3:+56034535	MS.gene065826:intron
TGCCCCTATAGCATAACTTA+TGG	0.404144	1.3:+56030269	MS.gene065826:CDS
TCAAAATGTAGTTTGACAAC+TGG	0.411155	1.3:-56034049	None:intergenic
GATCTTGAGAATATGGCTAT+TGG	0.412629	1.3:+56038036	MS.gene065826:CDS
TTGAAGAATATTGAAGTTGA+TGG	0.419885	1.3:+56032887	MS.gene065826:CDS
TCTGAAGTATGAGATCCCTT+TGG	0.425665	1.3:-56030170	None:intergenic
TCTTCCGAAGAAGCCCTTGA+TGG	0.436173	1.3:+56030785	MS.gene065826:CDS
CTGAAGTATGAGATCCCTTT+GGG	0.444221	1.3:-56030169	None:intergenic
ATCTCCATAAGTTATGCTAT+AGG	0.446865	1.3:-56030273	None:intergenic
ATAAGTTATGCTATAGGGGC+AGG	0.450756	1.3:-56030267	None:intergenic
CAACTACTGGATACTATGTC+AGG	0.454687	1.3:+56030303	MS.gene065826:CDS
ATATATTTGATTCTGGAAAT+GGG	0.463580	1.3:+56032933	MS.gene065826:CDS
TTGTAACCTTGCAGTGTTGA+TGG	0.473520	1.3:+56034019	MS.gene065826:intron
TCCGCCTTACAACCAGGAAT+CGG	0.485297	1.3:-56030239	None:intergenic
TGGTTCCACCAATTCCCCTA+TGG	0.487442	1.3:-56030924	None:intergenic
GCTGTACAATCTGGCACATT+GGG	0.492450	1.3:+56030758	MS.gene065826:CDS
CACTGCCTTGACAATATTCG+TGG	0.504030	1.3:+56030887	MS.gene065826:CDS
CAAAACCAATTATTCCATCA+AGG	0.505616	1.3:-56030799	None:intergenic
CGCTGTACAATCTGGCACAT+TGG	0.507679	1.3:+56030757	MS.gene065826:CDS
ATTTGCCATAGGGGAATTGG+TGG	0.515298	1.3:+56030919	MS.gene065826:CDS
TGGTCCGATTCCTGGTTGTA+AGG	0.515945	1.3:+56030235	MS.gene065826:CDS
TAATTTCAATTCAGGCTGAC+GGG	0.516305	1.3:-56033110	None:intergenic
TATAGCATAACTTATGGAGA+TGG	0.523472	1.3:+56030275	MS.gene065826:CDS
GGAGATGGAAGTGCAACTAC+TGG	0.525159	1.3:+56030290	MS.gene065826:CDS
AGTTGGTCATAGACTATGAC+AGG	0.528228	1.3:-56032998	None:intergenic
AAAACCAATTATTCCATCAA+GGG	0.529475	1.3:-56030798	None:intergenic
TATGGAGATTTCCGTTGATC+CGG	0.531316	1.3:-56030343	None:intergenic
AAGGGCACAGTGATTGATAG+TGG	0.533492	1.3:+56032956	MS.gene065826:CDS
GGTGGTGGAATATTTGCCAT+AGG	0.534159	1.3:+56030908	MS.gene065826:CDS
GTGGTGGAATATTTGCCATA+GGG	0.535995	1.3:+56030909	MS.gene065826:CDS
TTTGATTCTGGAAATGGGAA+GGG	0.536848	1.3:+56032938	MS.gene065826:CDS
GAAAAGTGTGACCCAAACTA+AGG	0.537843	1.3:+56034564	MS.gene065826:CDS
CTCCATAAGTTATGCTATAG+GGG	0.541427	1.3:-56030271	None:intergenic
GATTGATAGTGGAACAACCT+TGG	0.548951	1.3:+56032967	MS.gene065826:CDS
CTAATTTCAATTCAGGCTGA+CGG	0.548990	1.3:-56033111	None:intergenic
ATTTGATTCTGGAAATGGGA+AGG	0.551449	1.3:+56032937	MS.gene065826:CDS
ACAGCTTGCTGCATCTCGAA+AGG	0.556530	1.3:+56030847	MS.gene065826:CDS
AGTGTGACCCAAACTAAGGA+TGG	0.559654	1.3:+56034568	MS.gene065826:CDS
GGTGTTTCCGCCTTACAACC+AGG	0.561933	1.3:-56030245	None:intergenic
TAACCTTGCAGTGTTGATGG+TGG	0.562260	1.3:+56034022	MS.gene065826:intron
ACATACATATTTGGTACCAA+TGG	0.562501	1.3:-56030962	None:intergenic
AGGTGTGGCGCTGTACAATC+TGG	0.571318	1.3:+56030749	MS.gene065826:intron
ATGGCGTACTTTCCAGCATA+CGG	0.571746	1.3:-56033163	None:intergenic
TTGAGAATATGGCTATTGGA+TGG	0.573054	1.3:+56038040	MS.gene065826:CDS
CAGCCAATACATCGGACACC+AGG	0.583592	1.3:-56034538	None:intergenic
AAAAGTCAGAACAACTCCAT+TGG	0.586123	1.3:+56030946	MS.gene065826:CDS
CTTGACAATATTCGTGGTGG+TGG	0.588390	1.3:+56030893	MS.gene065826:CDS
TTGACTCTCTATGACCCAAA+GGG	0.594661	1.3:+56030155	MS.gene065826:CDS
AGGAATCGGACCATCATATG+TGG	0.599832	1.3:-56030225	None:intergenic
CTGGTGTCCGATGTATTGGC+TGG	0.602129	1.3:+56034539	MS.gene065826:CDS
AAGGACATGACACTTCTTGG+AGG	0.602130	1.3:+56034592	MS.gene065826:CDS
GACCCAAACTAAGGATGGAA+AGG	0.607035	1.3:+56034573	MS.gene065826:CDS
CCAGAATCAAATATATCCGA+GGG	0.608496	1.3:-56032926	None:intergenic
ATTGAAATTAGCTCGCATTG+AGG	0.611001	1.3:+56033123	MS.gene065826:CDS
TCCAGAATCAAATATATCCG+AGG	0.613600	1.3:-56032927	None:intergenic
TGATGTTCTACAGCTTCCCT+CGG	0.625997	1.3:+56032910	MS.gene065826:CDS
CTTGACTCTCTATGACCCAA+AGG	0.636415	1.3:+56030154	MS.gene065826:CDS
TAAGTTATGCTATAGGGGCA+GGG	0.637715	1.3:-56030266	None:intergenic
CTATGACCAACTAATTCCAA+AGG	0.638550	1.3:+56033009	MS.gene065826:CDS
TCCGATTCCTGGTTGTAAGG+CGG	0.644021	1.3:+56030238	MS.gene065826:CDS
CACCACCACGAATATTGTCA+AGG	0.649946	1.3:-56030892	None:intergenic
AACTACTGGATACTATGTCA+GGG	0.651961	1.3:+56030304	MS.gene065826:CDS
TGGTGGAATATTTGCCATAG+GGG	0.652757	1.3:+56030910	MS.gene065826:CDS
TATGACAGGAAGATAAGCCA+AGG	0.661057	1.3:-56032984	None:intergenic
TTGTAGGGCACATTACAATG+TGG	0.689913	1.3:+56032862	MS.gene065826:intron
TATTGGAACAGATAGTCATG+AGG	0.699625	1.3:-56034097	None:intergenic
TGCCTTGACAATATTCGTGG+TGG	0.718049	1.3:+56030890	MS.gene065826:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	56030149	56038075	56030149	ID=MS.gene065826
chr1.3	mRNA	56030149	56038075	56030149	ID=MS.gene065826.t1;Parent=MS.gene065826
chr1.3	exon	56030149	56030396	56030149	ID=MS.gene065826.t1.exon1;Parent=MS.gene065826.t1
chr1.3	CDS	56030149	56030396	56030149	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1
chr1.3	exon	56030751	56030978	56030751	ID=MS.gene065826.t1.exon2;Parent=MS.gene065826.t1
chr1.3	CDS	56030751	56030978	56030751	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1
chr1.3	exon	56032868	56033030	56032868	ID=MS.gene065826.t1.exon3;Parent=MS.gene065826.t1
chr1.3	CDS	56032868	56033030	56032868	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1
chr1.3	exon	56033103	56033176	56033103	ID=MS.gene065826.t1.exon4;Parent=MS.gene065826.t1
chr1.3	CDS	56033103	56033176	56033103	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1
chr1.3	exon	56034033	56034123	56034033	ID=MS.gene065826.t1.exon5;Parent=MS.gene065826.t1
chr1.3	CDS	56034033	56034123	56034033	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1
chr1.3	exon	56034538	56034613	56034538	ID=MS.gene065826.t1.exon6;Parent=MS.gene065826.t1
chr1.3	CDS	56034538	56034613	56034538	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1
chr1.3	exon	56038004	56038075	56038004	ID=MS.gene065826.t1.exon7;Parent=MS.gene065826.t1
chr1.3	CDS	56038004	56038075	56038004	ID=cds.MS.gene065826.t1;Parent=MS.gene065826.t1

Gene Sequence

>MS.gene065826

ATGGACTTGACTCTCTATGACCCAAAGGGATCTCATACTTCAGAGTTAATTTCTTGTGATCATGAGTTTTGCTCTTCCACATATGATGGTCCGATTCCTGGTTGTAAGGCGGAAACACCCTGCCCCTATAGCATAACTTATGGAGATGGAAGTGCAACTACTGGATACTATGTCAGGGACTATCTTACTTTTGACCGGATCAACGGAAATCTCCATACCGCACCGCAAAATAGCAGCATCATTTTTGGGTGAGAATTGTTATTTCTTATACTCCACAATTTACATTGTATTGTATGTTGTTGAGTTTTCGGGCGATCATGTATGTTGTGTTAGTGTCATTGTTGTTGAATTGAATTAGGGGGTTTTGTTATTTTTTCTCATGAGTGGGTTATCTTCGGCTGTAGACAAAATTTCCGTTGCCTTTTTGAATTAACTGTTTTATGGTACTAAAATATTTTCCATTCAAGTGGCGAGTTTAAGTGGGTCAATTTATTTAGAAACATTCATCTTCCTAGATTGATAAAGAATTAAAGAATAAAATCACTGGCTTGACATTTTTATTCCCCTCTTTTGCATCTCTGTGGGTCTTCGCTTGCTGACAGGTGTGGCGCTGTACAATCTGGCACATTGGGTGCATCTTCCGAAGAAGCCCTTGATGGAATAATTGGTTTTGGACAGGAAAATTCTTCTGTGCTTTCACAGCTTGCTGCATCTCGAAAGGTGAAAAAAATATTTTCACACTGCCTTGACAATATTCGTGGTGGTGGAATATTTGCCATAGGGGAATTGGTGGAACCAAAAGTCAGAACAACTCCATTGGTACCAAATATGTATGTTCATTAATCTAGTCTTTTGATCTCATGCCTTGATATTGGTTGTCATGTAAATCCAAGGGCAAAGCTTGTTGACACATAATTTCAAAAGTATCAATAATGAAATTGTTATATAACCTCATTTCACGATCAATTGATCATAATATTGTTTAAGTTGATATGCAATTAAAGTAGGGAGCAGTACTTACTATAAGTTGAAGAAAATAAATTTTCTAGTTGTGGATTTTATTTTTGGGAAGCCTTGGCGCAACGGTAAAGTTGTTGTCACATGACTAAAAGGTCACGGATTCAAATCCTGTAAACAGCCTCTTGTGTAAAAAACAGCATAAGGCTGCATACAATACACCAATTGGTGGGACCCCTCCCAGACCCTGCGTATGCGAGAGCTTTAGTGCACCGGGCTGCCATTTTTTTTATTGGATTTTATTTTTGTTCTTTGATGGGAATCCTCATAGGTATGGCTGCAAGTTAACCTTGGCTAAGATTGCTAGTTAGGTAAAGCCGTCTTCAGAGGCGTAGTTCTAGGGTTCATACCCTTGACATTGCAGGTAAAGCTTGCCGAGATTCATGACCACTATTAAAACCAACCACTGTAGGGCTAGATTTGCATTTTTCTATCCATTTGGATAAATGTTTTAGTGGTGAGACTCAGAAGCCCACTACATTGATTTTAAGTGTTCATTGATAGTGCAGCATTTAAGCCACGGCCCGAAGCCATGGATGGTATATTTCAGAAAAGAGAGAAGAGGGACACGTGAAAGAGATTTAGTGGGAGAGATGTTTATACTAACTGGAAATCGAGTAGGGCCTAGGAGTAATAAATGAAAGGTGACCAGACTCAGGAGCTCAATACAGTAACTGATGTTAAGGGCCTATTATTGTAGCAGTTAAGCTATGGCCCCAAGGAGTTGGAGGTATATTCCAAAAATGAGGGAAAGAGGAACACATGGAGTAGACTTAGTGGGAGAGACAATGTTAAGTGGAAATTTGAGAGGGTCCCAGTAGTAATAGATGAAAGGAGGTGGTTATGAAGAGGCCAGAGACATGAATATGGAGGAAGGAAGGCAAATTTTTGTTTATGGGTATATGCGCTGGGTTTGGGCAGGAAGTAGGAATCTACTGTTGTTTCTTGTGATTCTTCTTTTCATTTTCTTGTTCGCAATTCTTCTTGTTTTTATTTGGTACCAATATACTCATATGTTCACAGTTTGAGTTCAATGTAACTCCCTTTCGCATCTTCTTTGGCATTTCTATTATTGTGGTCTGTATCAATAAGATCCGAACATCTACCTCAATACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAACCATTTAAATGATACATAAAATGAAGTAAAAAAAACTTCATCTTAAAGACAAATTTATAAATGGTTGATATGGGAGAAACAAAGCATTCATACTAATTATTTTTTATGAATTTTCATTTGTATATTACCATCAAATATCTTGCTTTTAATCAAATATCATTAGAATAGGTGTGATTAGCTAATCAATCTTTTCATGTTTTTTTTGTCACACCCTTGTTGGATCTGGTGCGCTTATTTCAATTTTTAAACTGTAGAGAGTTTTGCGTATGTGAAATTCTATCTCTATCATTCTAGCTAGTTGTTATATGCATGATAGCTCCGTTGGTTTTCTGTAGTTCACTAGAAGGGCAATTAAGTCCCATAGGATATATCCATCTTAGACTGCTTTGAAAACTTTCCATGAATATTCTTTCAGTTGGTCATGATGTATTTGATATTCAGTTTAGCTCTTGGGATTGTAATTATGTTATCACCGCAGTCTGTTGTTGACTATTGTAGGGCACATTACAATGTGGTTTTGAAGAATATTGAAGTTGATGGTGATGTTCTACAGCTTCCCTCGGATATATTTGATTCTGGAAATGGGAAGGGCACAGTGATTGATAGTGGAACAACCTTGGCTTATCTTCCTGTCATAGTCTATGACCAACTAATTCCAAAGGTATTTGTATCTAGAAAATATTAATTCAATTAATATTTCTTCTGGAGTACTTATGGTTGTTCTTTTTGATAGATTTTTGCCCGTCAGCCTGAATTGAAATTAGCTCGCATTGAGGAACAATTTAAATGTTTTCCGTATGCTGGAAAGTACGCCATTTACCATTGTAACATTTTTGTATAGAAATTTCAATTTTCTCTGTTATATCTGAGTTATTATTGTTTGCAAATATTAGGGTGTGATCTATTTGTTTGATTCATCATTGTTTTTTTATTGACTGAAGATATCTCAAATAATTTATCAGAGATACTAGAGATTTATGTCATTATTCATTTTTCCTATTGGGTATGGTGACAACATCATATTTTCATTTAATTATATCTTCCCAAATGTCATATTTTGCTGTTTTGATAATATTAGTAATCCAATATTTTGAAGCCTGCTGGAGGAAAAAGATTAGTATAAAATAAAATAGAGGACATATGACAGTAGCAAGTAGGATTCAGTTAATATATTAGGGACTGTATCATGATTAACTTTTGCACTTGAGCAAGGACATAGCTTTAACAAAAATTGAGTTGTTGACAAAATTACTGATTAGCTTCTTGATGAAGTGACCACATTATGTGCTATAAAAAATTCATTAAACAGAGAAAGAGTGCTAATTCCTTTTTTCGGTCCTTTTCATTTTCTTTTTTGGGCTTTGTTGTCCATTTCCTTAGTTTGTTAAGGGAGTAATTGAGTGGGTTGAATTGTTATCTGCAGATAGTTGTATACATGATTATTTTAAGTAGACTATAGATATATAGACTTTTTGTTGCTACAAAAGAGCCATTTAAGATTGTTCTTTAAAATTTTATTTAACTAGGTATAAACTGTTCAAATGATGCTTGCTTTTTTACATTTTGAAAGCTGAATTTCATCAATTCATGAAAGCCACAAGTGCACTTGATTCTCTGGCATATGGTTGAGCTCTTAAATTTTTTGACCGTTGTAACCTTGCAGTGTTGATGGTGGATTTCCAGTTGTCAAACTACATTTTGAGGGTTCTCTTTCTCTGACAGTTTATCCTCATGACTATCTGTTCCAATATAAGGTGGTATGAACTTATTTATTTACTGTAGATGTACACTGACTCTAAACTGAGAAGCTTTGTAGATGCTAGAAACCCAAATTTCAATTTTGTACAAGTTTAACATGTCTGAAATGATTTCTCCCTCTCCGAACTGTACCCAGGTCCCAGGTGTTTTGTGTGTTATATCATACATGCTTATTAAGTGCCATATATTATATGTGTAGAGACATCATGTGATTGTAAATTAAATGGCCTGATGATCTATCCTTTGTTAACTCTTGACTTCGATGATGATCTAAATTGCCATATGGAGAATTTTACTGATATATTATGTATGTTTTCAATTTATTTTTTAATAGCTTATTTTGTTACACTTGTTGCTAGTGTGTACTATTATGTTTCTTGATATTATTTTTCCTTAATTTTGTCCTCTAGCCTGGTGTCCGATGTATTGGCTGGCAGAAAAGTGTGACCCAAACTAAGGATGGAAAGGACATGACACTTCTTGGAGGTACACTTTAAAATTAAATATCACTATTAAATACTTAAGACTGAAAATATTTTATTCCTCATATTGAACCAAATGGAATGCTCAATAGCTATTGTTGATTATTTTTCGATTTATTAGGATAGATTTAGTTTCCTTATTTGCTTATAAGTTTGCACAATCTCATTGTGAAATAAAAGTTGATCATTCTAAACTATTCAACTTGGTATCTAGAGCAAGGTTCAAAATCCTATTTTTTTTATCTGCGCGTTCAGTCTTCGTTTAGGCTGCCCTAGTTTATTTTTCAGTTCTATCATTCATTAAAAAAAGACTTCTATTTCTTCTGCCGCCATCACCAACTGAGATACCGCCACACGACTGTGACCGGACACTGCTGATCTGCCATCGTCTGAAACCCTGCCGTTGAACACCCTTTCATGCGCCTCCACACTCCGAACGTCTTTTTGGCACGTGAATTACATGCAGCCTTCTGAGCGTACATTTGCGACGCCGTTTGTTCCAGCTGGCTCGCCTTCTCCTATTTTTGTTGGGACAACTTCCAGTGTGTGGGTCCCACGTTTGACACGTGTTTTGGAGGTTCTTTTGTTGTTTTATCACTGTGAATGTTGTCCTGAGGCTCATTGCTGCAGTGTTTTTGGTCTTTTGTCACTGGTATCGCATCACAAGGTCTACTGGTTCATAATTTGGATCCTTGATAACTGTGTTATTTGTGTTGTGTCGTCACACCGTTGTTGGAACGTTTGTGATCTGCACTTGCTTTGTTTTTTTGGTTCGTTGTATGATGGTTGTCCAATACATTTCATCTCCAGCCACTTTGGCTCATTTTGGTAATTCTACGATTTATCTATCTAACTTTGTGGGATCATGGAATTTAGACTGGTGCTTCGGATCATGTCGTTGGTAATCCCTCTCTTTATCTCTAACTTGGCACCTCCTAAAATACATCACAACATCACCCTTGCTAATGGTTCCAAGGCACAAGTTACTGGTATTGGTCAAGTTTCACCTTTGTCATCTCTATCTCTGAATTATGTGTTACTTGTACTTGGTTCTCCTTTTAATTTGATTTCAACCAGTAAACTTACTCGCTCTCTCAATTTAATTTGATTTCAACACTTCCCCTCAAAAAGCTTGTTACAAATGTAAGTTATTTGAGGACCCCACAAAGATTTGGTGACGATATCAGCAAGCTAATCCTTCAAACAAGTATATGATGTTTTGTTGATTCCAAAGAGGATCTTCTCTCTAATTAAGTACCAGTCAACTTCTATATGTTTTGTTCTCTGATGAAAGATTGGACTGGACGAAAGGTACGAAGTTGGCTGGTTATCACATTCTAGTTCCATAGGACCAATTTCACTGAAATGCAACTCTTGCAGTAAATGTCTCGACCACAAAAGCTCACATATGGCGTGAGCCATAACCCGGTATTCAGCCTTTGTACTTGGCCGTGTATTAATAACTTGCTTACTACTCTTCCACTAAATTATACTTCCACCCATGAAAAGACAATAACCTGAAGTCAGCCGTCTATGCCTGAAAGCTACTGCTCAATTGGCATTTGTATATCCAACAATGTCAATATGATTCCCATCGGTGTAAACGAGCTCCTTTCGAGGCGTGAGCCATAACCCGGTATTCAGCCTTTGTACTCGGCCGTGTATTAACAACCTGCTTACTACTCTTCCACTAAATTATACTTCCACCCATGAAAAGACAATAACCTGAAGTCAGCCGTCTATGCCTGAAAGCTACTGTTCAATTGGCATTTGTATATCCAACAATGTCAATATGATTCCTATCGGTGTAAACGAGCTCCTTTCGAGGTGATCCTTTGTAGAAATTTGGGGCCTAACTCATCCTTACAAAACCGGCTTGTAAGGTGAGGAGTGCCTCCTGTTTATAAACTCTTATCAAGAGTCCTATCTAATTGGCATTTATACTTCCACCCATGAAAAGACAATAACCTGAAGTCAGCCGTCTATGCCTGAAAGCTACTGTTCAATTGGCATTTGTATATCCAACAATGTCAATATGATTCCTATCGGTGTAAACGAGCTCCTTTCGAGGTGATCCTTTGTAGAAATTTGGGGCCTAACTCATCCTTACAAAACCGGCTTGTAAGGTGAGGAGTGCCTCCTGTTTATAAACTCATATCAAGAGTCCTATCTAACCAATGTGGGACTAAATCCACCCCCTCAAAGCCAACACAAGGCAATTAGGGGAAGATCGCAATAAAGGTGGGATTACCAACACACCCCCTCACGCTCGGGGCGGGATTTCCAACATCCTTTTATGCATTTGATAATTTGAATAACCGATGCCAATAACTATCATGAGGAGAGATGAAAAACTACCTTGTCACATCGGCATAATACGACACATCTGGCCTGATCACAGTGAGATAGTTCAATTTACCGAGCAATTTTCGATATCTCCTCTAACTCACCATGCAAAACAACATTTTTTATGTCCAACTGTGCTTCATCACTAAAAAGAAGCAAACAAATGACATATTCACAATTGGTGATAAGGTCTCACTATAATCTTGACCATAGGCTGTGTATACCCCCTTGCTTTGGCGGGCTTTCAATCGGTCCACGTGGCCACCAGTGTCTATCTAAACATTCAACACCCATCTCATCAGTCATGGATTATCTCCACACTGAATGGGATACTTCCTGAGCTATGTTATGAATCGAGACAGACGAAAGAGTATAAACAAAAGCATAATAGGTGGGAGATAATCGACAGCATGGTACCAAATTATAAATGGAATGAAGGTTAAGAGTAGAATGTTTATTTTTGTGAATGGCAATAGTAAAATCAGCAGACGATGATGGAGCCAGATTAGGGGTAGGAGCGCCTAAAACATGAGCTGAAACACATGGTCCACACCGTCATTCATAAGTGACACCAAACCTATTCAAAGGGGAGGTGATTCTGGTGGTGTGATGAAGCACCACAAGAATAACATATGATAAATATTAATTGAATAAGTGCTTAATGAAGTTCTTTACCCATACCCCCCTCAATCATGGTACTGTATAGCATCCTATTAATAATATGTTGGTCTAAGCTTTAAATTGTTTAGCCATTTGTGTTAAACCTTGAGCATTCTCTCTCTGATGTTAAAATTCATTTTGGAAATCCCGTCTCACAAGCGTTTTTTTCCCCCTTTCTTCCTTAATTTTCTCTTATAGGCTTTAAAATGTTGAGCCATTTGGTGTTAATTTAAGAATTGTGTACTTGCATTTAATTTAAAGTGTAAACCTTGATCCTCATTTTCTCTCTCTTTTTCTCTCTAATGCTAGAATTCATTTGGGAAAATCCTTCTCACAAGTATTGGATGTGTTAATATCATTTATTAACTTTTATTATTTTCAATTTCAGATTTGGTACTTTCAAACAAACTTGTCTTGTACGATCTTGAGAATATGGCTATTGGATGGACTGAATACAATT

Protein sequence

>MS.gene065826.t1

MDLTLYDPKGSHTSELISCDHEFCSSTYDGPIPGCKAETPCPYSITYGDGSATTGYYVRDYLTFDRINGNLHTAPQNSSIIFGCGAVQSGTLGASSEEALDGIIGFGQENSSVLSQLAASRKVKKIFSHCLDNIRGGGIFAIGELVEPKVRTTPLVPNMAHYNVVLKNIEVDGDVLQLPSDIFDSGNGKGTVIDSGTTLAYLPVIVYDQLIPKIFARQPELKLARIEEQFKCFPYAGNVDGGFPVVKLHFEGSLSLTVYPHDYLFQYKPGVRCIGWQKSVTQTKDGKDMTLLGDLVLSNKLVLYDLENMAIGWTEYN