Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065889.t1 | XP_024637973.1 | 95.7 | 537 | 22 | 1 | 1 | 536 | 1 | 537 | 2.00E-244 | 855.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065889.t1 | A0A396IBW1 | 95.7 | 537 | 22 | 1 | 1 | 536 | 1 | 537 | 1.4e-244 | 855.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene065889 | 0.801337 | 9.44E-49 | -1.69E-46 |
MS.gene051279 | MS.gene065889 | 0.823129 | 1.64E-53 | -1.69E-46 |
MS.gene053226 | MS.gene065889 | 0.812231 | 4.70E-51 | -1.69E-46 |
MS.gene054651 | MS.gene065889 | 0.804837 | 1.78E-49 | -1.69E-46 |
MS.gene05686 | MS.gene065889 | 0.805568 | 1.25E-49 | -1.69E-46 |
MS.gene060348 | MS.gene065889 | 0.80593 | 1.05E-49 | -1.69E-46 |
MS.gene060352 | MS.gene065889 | 0.801464 | 8.89E-49 | -1.69E-46 |
MS.gene060353 | MS.gene065889 | 0.801265 | 9.77E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065889.t1 | MTR_2g436140 | 44.565 | 92 | 49 | 1 | 176 | 267 | 48 | 137 | 2.76e-17 | 85.1 |
MS.gene065889.t1 | MTR_7g060170 | 48.780 | 82 | 40 | 1 | 354 | 435 | 6 | 85 | 1.09e-15 | 73.6 |
MS.gene065889.t1 | MTR_7g074083 | 47.826 | 69 | 36 | 0 | 345 | 413 | 24 | 92 | 4.53e-15 | 72.4 |
MS.gene065889.t1 | MTR_5g086820 | 53.704 | 54 | 25 | 0 | 360 | 413 | 39 | 92 | 1.18e-11 | 62.8 |
MS.gene065889.t1 | MTR_8g086980 | 28.070 | 171 | 118 | 2 | 106 | 276 | 201 | 366 | 2.84e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 235 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCCATCCAGTCACACTTTC+AGG | 0.156242 | 4.2:+32018023 | MS.gene065889:CDS |
CACCTCCATATGTGGAGTTT+TGG | 0.190669 | 4.2:-32017666 | None:intergenic |
AATTACGATTGGTCTTATTT+TGG | 0.195049 | 4.2:-32018373 | None:intergenic |
CTATCTCCTGCATCCCGTTC+TGG | 0.201986 | 4.2:-32018790 | None:intergenic |
GTCTGAAACTTGGAGAGTTT+TGG | 0.224219 | 4.2:-32017807 | None:intergenic |
CAAAGAATCATCAAGCTAAA+AGG | 0.225169 | 4.2:+32019728 | MS.gene065889:CDS |
CAAAGAATCATCAAGCTAAA+AGG | 0.225169 | 4.2:+32020019 | MS.gene065889:CDS |
CAAAGCAACATCATGCTAAA+AGG | 0.228413 | 4.2:+32019584 | MS.gene065889:CDS |
CTTTCAGCTTGATGATTCTT+TGG | 0.237633 | 4.2:-32019871 | None:intergenic |
CAAAGCAGCGTCAAGCTAAA+AGG | 0.248224 | 4.2:+32019515 | MS.gene065889:CDS |
ATCCTCTGTATGAGGAGTTT+TGG | 0.284042 | 4.2:-32017765 | None:intergenic |
TGGGTTTCAACTAAACTATT+TGG | 0.290355 | 4.2:+32017559 | MS.gene065889:CDS |
CTTATACGGCCCTGTGGTCT+AGG | 0.301558 | 4.2:+32017854 | MS.gene065889:CDS |
GACGAAGACAATTTGTTAGA+TGG | 0.302419 | 4.2:+32019769 | MS.gene065889:CDS |
TTGGCTAGAGATCTTTATAA+AGG | 0.321950 | 4.2:-32018354 | None:intergenic |
GAATATTGGTGGAAGTTGTT+TGG | 0.327898 | 4.2:+32018087 | MS.gene065889:CDS |
TGAGTTTGTTAGTGGAGTTC+AGG | 0.329607 | 4.2:+32017409 | MS.gene065889:CDS |
CTTTCAGCTTGATGATGCTT+TGG | 0.336556 | 4.2:-32019445 | None:intergenic |
GTGCTGCGGCAGCCTCTTTA+CGG | 0.338605 | 4.2:-32018997 | None:intergenic |
TCCTCCATATGAGGAACTTT+GGG | 0.343302 | 4.2:-32017704 | None:intergenic |
AATATTGGTGGAAGTTGTTT+GGG | 0.347492 | 4.2:+32018088 | MS.gene065889:CDS |
AAAGAATCATCAAGCTAAAA+GGG | 0.374571 | 4.2:+32019729 | MS.gene065889:CDS |
AAAGAATCATCAAGCTAAAA+GGG | 0.374571 | 4.2:+32020020 | MS.gene065889:CDS |
GAAACAACATTATCAGCATT+TGG | 0.377989 | 4.2:+32019081 | MS.gene065889:CDS |
CAATATTCCCTTACATCCTC+TGG | 0.378318 | 4.2:-32018072 | None:intergenic |
TTCAACTAAACTATTTGGTC+TGG | 0.381910 | 4.2:+32017564 | MS.gene065889:CDS |
TATCTCCTGCATCCCGTTCT+GGG | 0.384815 | 4.2:-32018789 | None:intergenic |
CATTCTGCTTGTCTGAAACT+TGG | 0.385118 | 4.2:-32017817 | None:intergenic |
TTCAGGGTCCTTTCTATCGC+TGG | 0.387154 | 4.2:+32018040 | MS.gene065889:CDS |
AAGGAGGTACAAACACAAAA+TGG | 0.387875 | 4.2:+32018758 | MS.gene065889:CDS |
ACGGTAATGACGACGGCAAC+GGG | 0.394028 | 4.2:-32020091 | None:intergenic |
GAAAGAAACATCTAGCTCTA+AGG | 0.395879 | 4.2:+32019299 | MS.gene065889:CDS |
AACGGGATGCAGGAGATAGA+TGG | 0.396181 | 4.2:+32018794 | MS.gene065889:CDS |
TTCCTCCATATGAGGAACTT+TGG | 0.401403 | 4.2:-32017705 | None:intergenic |
CAGAGGATGTAAGGGAATAT+TGG | 0.403849 | 4.2:+32018073 | MS.gene065889:CDS |
GGAGGCTGCCGCAGCACGTC+AGG | 0.404362 | 4.2:+32019024 | MS.gene065889:CDS |
TGATCACACCCACCACTATA+AGG | 0.408691 | 4.2:-32018944 | None:intergenic |
AAGAGTCGAGGTCGGTGTTA+TGG | 0.410049 | 4.2:+32018857 | MS.gene065889:CDS |
GTGAGACCCCAGAGGATGTA+AGG | 0.413212 | 4.2:+32018064 | MS.gene065889:CDS |
AGAGGCTGCCGCAGCACATC+AGG | 0.413600 | 4.2:+32019003 | MS.gene065889:CDS |
GTTTCGACTCAGCTGCCTCC+TGG | 0.416729 | 4.2:-32019063 | None:intergenic |
GGAGGAATCAGAAGAGGAGG+AGG | 0.416759 | 4.2:+32017721 | MS.gene065889:CDS |
ATAAAAGGAAGTCTGGCAAT+TGG | 0.418430 | 4.2:+32018600 | MS.gene065889:CDS |
TGCTTTGGTAAGACCCCGTC+TGG | 0.419898 | 4.2:-32019640 | None:intergenic |
TTAATGCAGGCTCAAGAACT+TGG | 0.423789 | 4.2:+32018539 | MS.gene065889:intron |
GGAGGCAGCCACAGCACGCC+AGG | 0.425194 | 4.2:+32019045 | MS.gene065889:CDS |
TGCTTTGGTAAAACCCCATC+TGG | 0.426446 | 4.2:-32019931 | None:intergenic |
CGCAGGGGACGCCAATCAGC+AGG | 0.428309 | 4.2:+32019187 | MS.gene065889:CDS |
ATGGTAAGGCCTCCCAGAAC+GGG | 0.431393 | 4.2:+32018777 | MS.gene065889:CDS |
CTCTTTACGGACTGCATCAA+TGG | 0.432826 | 4.2:-32018984 | None:intergenic |
GCTTGGGATCCTCGTGATCA+TGG | 0.433534 | 4.2:+32018191 | MS.gene065889:CDS |
TTGAACTATGAGTTTGTTAG+TGG | 0.434300 | 4.2:+32017401 | MS.gene065889:CDS |
AAAGAATCATCAAGCTGAAA+GGG | 0.439093 | 4.2:+32019873 | MS.gene065889:CDS |
AAAGCAACATCATGCTAAAA+GGG | 0.442573 | 4.2:+32019585 | MS.gene065889:CDS |
CTGATGGGAAGGTTCTTATA+CGG | 0.442619 | 4.2:+32017840 | MS.gene065889:CDS |
AAAGCAGCGTCAAGCTAAAA+GGG | 0.443246 | 4.2:+32019516 | MS.gene065889:CDS |
GCCACCCATAAAAGGAAGTC+TGG | 0.448504 | 4.2:+32018593 | MS.gene065889:CDS |
TAAAAGGAAGTCTGGCAATT+GGG | 0.451077 | 4.2:+32018601 | MS.gene065889:CDS |
ATCGAATAGCAGTAGACATA+TGG | 0.451262 | 4.2:+32017631 | MS.gene065889:CDS |
AACTCCACATATGGAGGTGC+AGG | 0.452320 | 4.2:+32017670 | MS.gene065889:CDS |
CTTGAGCAAAATATTTGTCT+AGG | 0.452483 | 4.2:+32017602 | MS.gene065889:CDS |
GCTCTAGAGCGCCAATCAGC+AGG | 0.461373 | 4.2:+32019139 | MS.gene065889:CDS |
GGAAGGGTCTTAATGTCCAT+TGG | 0.462610 | 4.2:+32018321 | MS.gene065889:CDS |
TCTTCTGATTCCTCCATATG+AGG | 0.463683 | 4.2:-32017713 | None:intergenic |
CTCTCAAAAGTGAGGAAGAA+GGG | 0.464033 | 4.2:+32018266 | MS.gene065889:CDS |
GCAGCAGCAGGCGCCGCGCT+AGG | 0.466466 | 4.2:-32017991 | None:intergenic |
TTCGCTGACTCAGGAGTCTC+GGG | 0.469281 | 4.2:+32018919 | MS.gene065889:CDS |
ACGAAGACAATTTGTTAGAT+GGG | 0.469400 | 4.2:+32019770 | MS.gene065889:CDS |
CATCCTCACTATGATAATGA+TGG | 0.471233 | 4.2:+32019826 | MS.gene065889:CDS |
TCTTCCTGCACCTCCATATG+TGG | 0.472883 | 4.2:-32017674 | None:intergenic |
GGATCCCAAAGTTCCTCATA+TGG | 0.475777 | 4.2:+32017700 | MS.gene065889:CDS |
GGATCCCAAAACTCCACATA+TGG | 0.476165 | 4.2:+32017661 | MS.gene065889:CDS |
AAAGCATCATCAAGCTGAAA+GGG | 0.476885 | 4.2:+32019447 | MS.gene065889:CDS |
TGCAGATAATGGATCGTAGT+TGG | 0.477132 | 4.2:+32017345 | None:intergenic |
GCGTGTTTAATCGCAGCAGC+AGG | 0.479484 | 4.2:-32018003 | None:intergenic |
CAGACTTTGCTTTAAACCTC+CGG | 0.479735 | 4.2:+32018885 | MS.gene065889:CDS |
GAAGGGTCTTAATGTCCATT+GGG | 0.482860 | 4.2:+32018322 | MS.gene065889:CDS |
GTCTCACTCCAGCGATAGAA+AGG | 0.483175 | 4.2:-32018048 | None:intergenic |
TAGTTCAAGCCTTTCCTATG+TGG | 0.485535 | 4.2:-32017386 | None:intergenic |
AGTTCAGGAGTTTATTAAGA+AGG | 0.488470 | 4.2:+32017424 | MS.gene065889:CDS |
CTATGATGATGAGGATTCGC+TGG | 0.489767 | 4.2:+32019411 | MS.gene065889:CDS |
CTTCGCTGACTCAGGAGTCT+CGG | 0.490441 | 4.2:+32018918 | MS.gene065889:CDS |
GGCCTCCCAGAACGGGATGC+AGG | 0.492623 | 4.2:+32018784 | MS.gene065889:CDS |
AGAAGGGGACGAGACCTCAT+TGG | 0.497085 | 4.2:+32018282 | MS.gene065889:CDS |
TCTTCTGAATCCTCTGTATG+AGG | 0.497193 | 4.2:-32017773 | None:intergenic |
CAGTAGACATATGGAGGAGG+AGG | 0.497751 | 4.2:+32017640 | MS.gene065889:CDS |
GAGCCTTGCGGCCTGTGGTG+TGG | 0.498769 | 4.2:-32018415 | None:intergenic |
ATTGGATATGTGAAGAGGCT+TGG | 0.499061 | 4.2:+32018300 | MS.gene065889:CDS |
GGAGGAGGAATCAGAAGAGG+AGG | 0.501572 | 4.2:+32017736 | MS.gene065889:CDS |
CAAGTGTGAGTCAAGCTCGC+AGG | 0.505729 | 4.2:+32019170 | MS.gene065889:CDS |
CAAGTGTGAGTCAAGCTCGC+AGG | 0.505729 | 4.2:+32019218 | MS.gene065889:CDS |
GCCTTTACACGAATTACGAT+TGG | 0.507806 | 4.2:-32018384 | None:intergenic |
GGCTGCCGCAGCACGTCAGG+AGG | 0.508722 | 4.2:+32019027 | MS.gene065889:CDS |
AGCTGCCTCCTGGCGTGCTG+TGG | 0.510431 | 4.2:-32019053 | None:intergenic |
GATATGTGAAGAGGCTTGGA+AGG | 0.511244 | 4.2:+32018304 | MS.gene065889:CDS |
TCAGACAAGCAGAATGCTGA+TGG | 0.511382 | 4.2:+32017824 | MS.gene065889:CDS |
ATCCTCACTATGATAATGAT+GGG | 0.512412 | 4.2:+32019827 | MS.gene065889:CDS |
CAAAGAATCATCAAGCTGAA+AGG | 0.512957 | 4.2:+32019872 | MS.gene065889:CDS |
AATATTCCCTTACATCCTCT+GGG | 0.513122 | 4.2:-32018071 | None:intergenic |
AGAGGATTCAGAAGAGGAGG+AGG | 0.520308 | 4.2:+32017781 | MS.gene065889:CDS |
ACCAATCGTAATTCGTGTAA+AGG | 0.522365 | 4.2:+32018383 | MS.gene065889:CDS |
CTAAGAACTCGTCTAGTGAA+TGG | 0.523574 | 4.2:-32019264 | None:intergenic |
TTGAGCAAAATATTTGTCTA+GGG | 0.524348 | 4.2:+32017603 | MS.gene065889:CDS |
AAAACTCATTTGTACAAGAG+TGG | 0.525014 | 4.2:+32017539 | MS.gene065889:CDS |
TGGTGTAACTTCGCTGACTC+AGG | 0.525580 | 4.2:+32018910 | MS.gene065889:CDS |
GGAGGAATCAGAAGAGGAGG+AGG | 0.525843 | 4.2:+32017739 | MS.gene065889:CDS |
ACGGGATGCAGGAGATAGAT+GGG | 0.528666 | 4.2:+32018795 | MS.gene065889:CDS |
TAATGACGACGGCAACGGGC+TGG | 0.528740 | 4.2:-32020087 | None:intergenic |
AAGTGTGAGTCAAGCTCGCA+GGG | 0.528888 | 4.2:+32019171 | MS.gene065889:CDS |
AAGTGTGAGTCAAGCTCGCA+GGG | 0.528888 | 4.2:+32019219 | MS.gene065889:CDS |
ATGATGACGATTTGCCAGAC+GGG | 0.529560 | 4.2:+32019626 | MS.gene065889:CDS |
CAAAGCATCATCAAGCTGAA+AGG | 0.530065 | 4.2:+32019446 | MS.gene065889:CDS |
CTAGATGTTTCTTTCTTCGA+CGG | 0.530644 | 4.2:-32019291 | None:intergenic |
GCGAATCCTCGTCATTATCA+TGG | 0.530875 | 4.2:-32019690 | None:intergenic |
ACATATGGAGGTGCAGGAAG+AGG | 0.531104 | 4.2:+32017676 | MS.gene065889:CDS |
TAAGACCTCGTCTAGTGAAT+CGG | 0.531398 | 4.2:-32020064 | None:intergenic |
TTATACGGCCCTGTGGTCTA+GGG | 0.531997 | 4.2:+32017855 | MS.gene065889:CDS |
TTGTGAAAGCACCTGCTGAT+TGG | 0.534635 | 4.2:-32019150 | None:intergenic |
AAACTCATTTGTACAAGAGT+GGG | 0.538219 | 4.2:+32017540 | MS.gene065889:CDS |
CTTGGGATCCTCGTGATCAT+GGG | 0.539317 | 4.2:+32018192 | MS.gene065889:CDS |
AGGATGTAAGGGAATATTGG+TGG | 0.540950 | 4.2:+32018076 | MS.gene065889:CDS |
GAAACTTGAATTGTGGAAAG+AGG | 0.542708 | 4.2:+32018823 | MS.gene065889:CDS |
TTGTGAAAGCACCTGCTGAT+TGG | 0.546159 | 4.2:-32019198 | None:intergenic |
TACGGTAATGACGACGGCAA+CGG | 0.549951 | 4.2:-32020092 | None:intergenic |
GGCGGAGCAGTCCACACCAC+AGG | 0.552096 | 4.2:+32018404 | MS.gene065889:CDS |
TATAACTTACCCTAGACCAC+AGG | 0.552243 | 4.2:-32017864 | None:intergenic |
TATTTGGTCTGGACTGAGCA+TGG | 0.553267 | 4.2:+32017575 | MS.gene065889:CDS |
ACACACTTGCACATTGCACA+TGG | 0.554386 | 4.2:-32017491 | None:intergenic |
CTCGGGAACCTTATAGTGGT+GGG | 0.556218 | 4.2:+32018936 | MS.gene065889:CDS |
TCTCGGGAACCTTATAGTGG+TGG | 0.557452 | 4.2:+32018935 | MS.gene065889:CDS |
GCTCTCAAAAGTGAGGAAGA+AGG | 0.557493 | 4.2:+32018265 | MS.gene065889:CDS |
CATTGATGCAGTCCGTAAAG+AGG | 0.559031 | 4.2:+32018985 | MS.gene065889:CDS |
TAATGCAGGCTCAAGAACTT+GGG | 0.559518 | 4.2:+32018540 | MS.gene065889:intron |
ATCGTAGTTGGATGTATGAT+AGG | 0.563873 | 4.2:+32017357 | MS.gene065889:CDS |
CGAAGACAATTTGTTAGATG+GGG | 0.565203 | 4.2:+32019771 | MS.gene065889:CDS |
GGCTGCCGCAGCACATCAGG+AGG | 0.566647 | 4.2:+32019006 | MS.gene065889:CDS |
GAGTCTCGGGAACCTTATAG+TGG | 0.570097 | 4.2:+32018932 | MS.gene065889:CDS |
TAAAGGCTTCACCCTCCCAA+TGG | 0.571271 | 4.2:-32018337 | None:intergenic |
ATGATGACGATTTGCCAGAT+GGG | 0.572276 | 4.2:+32019917 | MS.gene065889:CDS |
GAATTGTGGAAAGAGGTTGC+TGG | 0.573145 | 4.2:+32018830 | MS.gene065889:CDS |
TACAGAGGATTCAGAAGAGG+AGG | 0.573871 | 4.2:+32017778 | MS.gene065889:CDS |
GGCAGCCACAGCACGCCAGG+AGG | 0.574306 | 4.2:+32019048 | MS.gene065889:CDS |
AATGGTAAGGCCTCCCAGAA+CGG | 0.574382 | 4.2:+32018776 | MS.gene065889:CDS |
TGATGAGGATTCACTAGATG+AGG | 0.576767 | 4.2:+32019486 | MS.gene065889:CDS |
AAGGACCCTGAAAGTGTGAC+TGG | 0.578783 | 4.2:-32018029 | None:intergenic |
ATCAAAACCAAACTCAACTA+CGG | 0.579654 | 4.2:-32020110 | None:intergenic |
CAAGCAGAATGCTGATGGGA+AGG | 0.582859 | 4.2:+32017829 | MS.gene065889:CDS |
GGTACAAACACAAAATGGTA+AGG | 0.583099 | 4.2:+32018763 | MS.gene065889:CDS |
CCGCAAGGCTCATGTTGATG+TGG | 0.585666 | 4.2:+32018427 | MS.gene065889:CDS |
GAATCGGTGTCATCATAAAG+AGG | 0.589843 | 4.2:-32020048 | None:intergenic |
TGAGACCCCAGAGGATGTAA+GGG | 0.590171 | 4.2:+32018065 | MS.gene065889:CDS |
GATGATGACGATTTGCCAGA+TGG | 0.590733 | 4.2:+32019916 | MS.gene065889:CDS |
TCAAGAACTTGGGCGGTCTG+TGG | 0.591187 | 4.2:+32018550 | MS.gene065889:CDS |
GCCATCCAGTCACACTTTCA+GGG | 0.595008 | 4.2:+32018024 | MS.gene065889:CDS |
GGAGTTTATTAAGAAGGCCA+AGG | 0.597232 | 4.2:+32017430 | MS.gene065889:CDS |
GGCAGCCTCCTGATGTGCTG+CGG | 0.601804 | 4.2:-32019011 | None:intergenic |
TTGTAGGTGGGCTCCTAGCG+CGG | 0.605332 | 4.2:+32017978 | MS.gene065889:intron |
TATGGAGGTGCAGGAAGAGG+AGG | 0.606341 | 4.2:+32017679 | MS.gene065889:CDS |
AACATGAGCCTTGCGGCCTG+TGG | 0.606679 | 4.2:-32018420 | None:intergenic |
ACAATATCACGATCGTCTGA+AGG | 0.608845 | 4.2:+32018739 | MS.gene065889:CDS |
AGAGGAGGAGGAATCAGAAG+AGG | 0.608992 | 4.2:+32017733 | MS.gene065889:CDS |
TATGGAGGAATCAGAAGAGG+AGG | 0.610115 | 4.2:+32017718 | MS.gene065889:CDS |
GGCTGCCTCCTGACGTGCTG+CGG | 0.610961 | 4.2:-32019032 | None:intergenic |
AGTCCACACCACAGGCCGCA+AGG | 0.611297 | 4.2:+32018412 | MS.gene065889:CDS |
GGGCGACGAAACTTGAATTG+TGG | 0.613873 | 4.2:+32018816 | MS.gene065889:CDS |
ACATCCTCGCTACGATGATG+AGG | 0.614505 | 4.2:+32019471 | MS.gene065889:CDS |
ATATTGGTGGAAGTTGTTTG+GGG | 0.616097 | 4.2:+32018089 | MS.gene065889:CDS |
TGTTGATGTGGCACTTAGCA+TGG | 0.616336 | 4.2:+32018439 | MS.gene065889:CDS |
AGGATCAATCCACATAGGAA+AGG | 0.616671 | 4.2:+32017377 | MS.gene065889:CDS |
TAGCAGTAGACATATGGAGG+AGG | 0.616879 | 4.2:+32017637 | MS.gene065889:CDS |
ACATTATCACTATGATGATG+AGG | 0.618914 | 4.2:+32019402 | MS.gene065889:CDS |
TTACATATGTTGTTTGAGAG+CGG | 0.620785 | 4.2:-32018631 | None:intergenic |
TCCCAAAACTCCTCATACAG+AGG | 0.621524 | 4.2:+32017763 | MS.gene065889:CDS |
CAGATATGCTCTCAAAAGTG+AGG | 0.622705 | 4.2:+32018258 | MS.gene065889:CDS |
ACCTCATTGGATATGTGAAG+AGG | 0.624423 | 4.2:+32018295 | MS.gene065889:CDS |
TCCTCGTCATTATCATGGTG+AGG | 0.625583 | 4.2:-32019685 | None:intergenic |
GATGATGACGATTTGCCAGA+CGG | 0.628419 | 4.2:+32019625 | MS.gene065889:CDS |
GGGTCTTAATGTCCATTGGG+AGG | 0.630554 | 4.2:+32018325 | MS.gene065889:CDS |
GAATAGCAGTAGACATATGG+AGG | 0.630715 | 4.2:+32017634 | MS.gene065889:CDS |
TCCTCATCATTATCATAGTG+AGG | 0.630997 | 4.2:-32019976 | None:intergenic |
TTGATATACCCATGATCACG+AGG | 0.631630 | 4.2:-32018200 | None:intergenic |
TGATGAGGATTCGCTACATG+AGG | 0.633190 | 4.2:+32019990 | MS.gene065889:CDS |
GCCTCTTCACATATCCAATG+AGG | 0.635189 | 4.2:-32018296 | None:intergenic |
TCATACAGAGGATTCAGAAG+AGG | 0.636032 | 4.2:+32017775 | MS.gene065889:CDS |
TCCCAAAACTCCACATATGG+AGG | 0.637455 | 4.2:+32017664 | MS.gene065889:CDS |
GGTCTTAATGTCCATTGGGA+GGG | 0.637833 | 4.2:+32018326 | MS.gene065889:CDS |
TGATCATGCTATGCATCTAG+AGG | 0.639265 | 4.2:+32018961 | MS.gene065889:CDS |
TCCCCATCATTATCATAGTG+AGG | 0.639323 | 4.2:-32019829 | None:intergenic |
CAGACAAGCAGAATGCTGAT+GGG | 0.640959 | 4.2:+32017825 | MS.gene065889:CDS |
AAGAATCATCAAGCTGAAAG+GGG | 0.641028 | 4.2:+32019874 | MS.gene065889:CDS |
TCATATGGAGGAATCAGAAG+AGG | 0.642617 | 4.2:+32017715 | MS.gene065889:CDS |
ATGATAGGATCAATCCACAT+AGG | 0.644088 | 4.2:+32017372 | MS.gene065889:CDS |
TGATGGGGATTCGTTACATG+AGG | 0.644762 | 4.2:+32019843 | MS.gene065889:CDS |
AAGCAACATCATGCTAAAAG+GGG | 0.645171 | 4.2:+32019586 | MS.gene065889:CDS |
ACAACATTATCAGCATTTGG+AGG | 0.645179 | 4.2:+32019084 | MS.gene065889:CDS |
AAGCATCATCAAGCTGAAAG+GGG | 0.649585 | 4.2:+32019448 | MS.gene065889:CDS |
ACCCTGAAAGTGTGACTGGA+TGG | 0.650411 | 4.2:-32018025 | None:intergenic |
CTCAACTACGGTAATGACGA+CGG | 0.650510 | 4.2:-32020098 | None:intergenic |
TCCCAAAGTTCCTCATATGG+AGG | 0.653546 | 4.2:+32017703 | MS.gene065889:CDS |
TCCTCACTATGATAATGATG+AGG | 0.654946 | 4.2:+32019975 | MS.gene065889:CDS |
CCACATCAACATGAGCCTTG+CGG | 0.654991 | 4.2:-32018427 | None:intergenic |
TGATGACGATTTGCCAGATG+GGG | 0.655451 | 4.2:+32019918 | MS.gene065889:CDS |
AAAGTCTTTAACTCCAAGAG+AGG | 0.657096 | 4.2:+32017514 | MS.gene065889:CDS |
ATATGTGAAGAGGCTTGGAA+GGG | 0.657558 | 4.2:+32018305 | MS.gene065889:CDS |
TGCAGGCTCAAGAACTTGGG+CGG | 0.659117 | 4.2:+32018543 | MS.gene065889:intron |
ATAACTTACCCTAGACCACA+GGG | 0.660044 | 4.2:-32017863 | None:intergenic |
TTGTGGAAAGAGGTTGCTGG+TGG | 0.660274 | 4.2:+32018833 | MS.gene065889:CDS |
AAGAATCATCAAGCTAAAAG+GGG | 0.661347 | 4.2:+32019730 | MS.gene065889:CDS |
AAGAATCATCAAGCTAAAAG+GGG | 0.661347 | 4.2:+32020021 | MS.gene065889:CDS |
TTTGCTTTAAACCTCCGGTG+TGG | 0.663712 | 4.2:+32018890 | MS.gene065889:CDS |
TCGTCATCATCGTCATAGTG+AGG | 0.664947 | 4.2:-32019613 | None:intergenic |
CTGGTGGAAAGAGTCGAGGT+CGG | 0.666255 | 4.2:+32018849 | MS.gene065889:CDS |
TCTCAAAAGTGAGGAAGAAG+GGG | 0.667382 | 4.2:+32018267 | MS.gene065889:CDS |
TGACGAGGATTCGCTACATG+AGG | 0.668713 | 4.2:+32019699 | MS.gene065889:CDS |
AAGCAGCGTCAAGCTAAAAG+GGG | 0.671751 | 4.2:+32019517 | MS.gene065889:CDS |
TTGTCTTCGTCATCATAGTG+AGG | 0.672385 | 4.2:-32019757 | None:intergenic |
CGACGACGACTCTCTAGATG+AGG | 0.674837 | 4.2:+32019555 | MS.gene065889:CDS |
TCCTCACTATGATAATGATG+GGG | 0.674907 | 4.2:+32019828 | MS.gene065889:CDS |
CTCCTGCATCCCGTTCTGGG+AGG | 0.677042 | 4.2:-32018786 | None:intergenic |
CGGGATGCAGGAGATAGATG+GGG | 0.677483 | 4.2:+32018796 | MS.gene065889:CDS |
GTTGCTGGTGGAAAGAGTCG+AGG | 0.681260 | 4.2:+32018845 | MS.gene065889:CDS |
AATCGTAATTCGTGTAAAGG+CGG | 0.682791 | 4.2:+32018386 | MS.gene065889:CDS |
GAATGGTCATCATCATAGCG+AGG | 0.683926 | 4.2:-32019247 | None:intergenic |
GCGAAGTTACACCACACCGG+AGG | 0.685594 | 4.2:-32018901 | None:intergenic |
ATATCACGATCGTCTGAAGG+AGG | 0.686760 | 4.2:+32018742 | MS.gene065889:CDS |
TCCTCACCATGATAATGACG+AGG | 0.694396 | 4.2:+32019684 | MS.gene065889:CDS |
GAATCCTCATCATCGTAGCG+AGG | 0.696997 | 4.2:-32019475 | None:intergenic |
AAGGTTCTTATACGGCCCTG+TGG | 0.700616 | 4.2:+32017848 | MS.gene065889:CDS |
TGATGACGATTTGCCAGACG+GGG | 0.703928 | 4.2:+32019627 | MS.gene065889:CDS |
TGACACCGATTCACTAGACG+AGG | 0.704444 | 4.2:+32020059 | MS.gene065889:CDS |
TCAGCGAAGTTACACCACAC+CGG | 0.719304 | 4.2:-32018904 | None:intergenic |
AGTGTGAGTCAAGCTCGCAG+GGG | 0.725594 | 4.2:+32019172 | MS.gene065889:CDS |
AGTGTGAGTCAAGCTCGCAG+GGG | 0.725594 | 4.2:+32019220 | MS.gene065889:CDS |
ATATTCCCTTACATCCTCTG+GGG | 0.728189 | 4.2:-32018070 | None:intergenic |
TCGCTGGAGTGAGACCCCAG+AGG | 0.762521 | 4.2:+32018056 | MS.gene065889:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTGTTTTTTAATTTAATGC+AGG | + | chr4.2:32018526-32018545 | MS.gene065889:intron | 20.0% |
! | AAACAACATATGTAAGTTGT+TGG | + | chr4.2:32018639-32018658 | MS.gene065889:intron | 25.0% |
! | AAAGAATCATCAAGCTAAAA+GGG | + | chr4.2:32019729-32019748 | MS.gene065889:CDS | 25.0% |
! | CTCTTGAACAAAATGATATT+AGG | + | chr4.2:32018694-32018713 | MS.gene065889:intron | 25.0% |
! | TAACTAGTTATCGTTATGTA+GGG | - | chr4.2:32018148-32018167 | None:intergenic | 25.0% |
! | TTGAGCAAAATATTTGTCTA+GGG | + | chr4.2:32017603-32017622 | MS.gene065889:CDS | 25.0% |
!!! | AATTACGATTGGTCTTATTT+TGG | - | chr4.2:32018376-32018395 | None:intergenic | 25.0% |
!!! | ACTAGTTAGATTCCTTTTTT+AGG | + | chr4.2:32018160-32018179 | MS.gene065889:intron | 25.0% |
!!! | ATTTAGTTTGGACTTTTTGT+AGG | + | chr4.2:32017962-32017981 | MS.gene065889:intron | 25.0% |
!!! | TGATATTGTTTCTGGAAAAA+AGG | - | chr4.2:32018728-32018747 | None:intergenic | 25.0% |
AAAAAGACGTTTCAAACAAG+AGG | + | chr4.2:32018221-32018240 | MS.gene065889:CDS | 30.0% | |
AAAACTCATTTGTACAAGAG+TGG | + | chr4.2:32017539-32017558 | MS.gene065889:CDS | 30.0% | |
AAACTCATTTGTACAAGAGT+GGG | + | chr4.2:32017540-32017559 | MS.gene065889:CDS | 30.0% | |
AAAGAATCATCAAGCTGAAA+GGG | + | chr4.2:32019873-32019892 | MS.gene065889:CDS | 30.0% | |
AAAGCAACATCATGCTAAAA+GGG | + | chr4.2:32019585-32019604 | MS.gene065889:CDS | 30.0% | |
AACTAGTTATCGTTATGTAG+GGG | - | chr4.2:32018147-32018166 | None:intergenic | 30.0% | |
AAGAATCATCAAGCTAAAAG+GGG | + | chr4.2:32019730-32019749 | MS.gene065889:CDS | 30.0% | |
AAGCAATCTTGTCCTAAAAA+AGG | - | chr4.2:32018175-32018194 | None:intergenic | 30.0% | |
AATATTGGTGGAAGTTGTTT+GGG | + | chr4.2:32018088-32018107 | MS.gene065889:CDS | 30.0% | |
AGTTCAGGAGTTTATTAAGA+AGG | + | chr4.2:32017424-32017443 | MS.gene065889:CDS | 30.0% | |
CAAAGAATCATCAAGCTAAA+AGG | + | chr4.2:32019728-32019747 | MS.gene065889:CDS | 30.0% | |
CTAACTAGTTATCGTTATGT+AGG | - | chr4.2:32018149-32018168 | None:intergenic | 30.0% | |
CTTGAGCAAAATATTTGTCT+AGG | + | chr4.2:32017602-32017621 | MS.gene065889:CDS | 30.0% | |
GAAACAACATTATCAGCATT+TGG | + | chr4.2:32019081-32019100 | MS.gene065889:CDS | 30.0% | |
TGGGTTTCAACTAAACTATT+TGG | + | chr4.2:32017559-32017578 | MS.gene065889:CDS | 30.0% | |
TTCAACTAAACTATTTGGTC+TGG | + | chr4.2:32017564-32017583 | MS.gene065889:CDS | 30.0% | |
TTGGCTAGAGATCTTTATAA+AGG | - | chr4.2:32018357-32018376 | None:intergenic | 30.0% | |
! | ACATTATCACTATGATGATG+AGG | + | chr4.2:32019402-32019421 | MS.gene065889:CDS | 30.0% |
! | ATCCTCACTATGATAATGAT+GGG | + | chr4.2:32019827-32019846 | MS.gene065889:CDS | 30.0% |
! | TTACATATGTTGTTTGAGAG+CGG | - | chr4.2:32018634-32018653 | None:intergenic | 30.0% |
! | TTGATGGTTGACATTTAGTT+TGG | + | chr4.2:32017950-32017969 | MS.gene065889:intron | 30.0% |
!! | ACGAAGACAATTTGTTAGAT+GGG | + | chr4.2:32019770-32019789 | MS.gene065889:CDS | 30.0% |
!! | TTGAACTATGAGTTTGTTAG+TGG | + | chr4.2:32017401-32017420 | MS.gene065889:CDS | 30.0% |
!!! | CTTTTAGCTTGATGATTCTT+TGG | - | chr4.2:32019730-32019749 | None:intergenic | 30.0% |
!!! | TTTTTAGGACAAGATTGCTT+GGG | + | chr4.2:32018175-32018194 | MS.gene065889:intron | 30.0% |
!!! | TTTTTTAGGACAAGATTGCT+TGG | + | chr4.2:32018174-32018193 | MS.gene065889:intron | 30.0% |
AAAGTCTTTAACTCCAAGAG+AGG | + | chr4.2:32017514-32017533 | MS.gene065889:CDS | 35.0% | |
AAGAATCATCAAGCTGAAAG+GGG | + | chr4.2:32019874-32019893 | MS.gene065889:CDS | 35.0% | |
AAGCAACATCATGCTAAAAG+GGG | + | chr4.2:32019586-32019605 | MS.gene065889:CDS | 35.0% | |
AATATTCCCTTACATCCTCT+GGG | - | chr4.2:32018074-32018093 | None:intergenic | 35.0% | |
AATCGTAATTCGTGTAAAGG+CGG | + | chr4.2:32018386-32018405 | MS.gene065889:CDS | 35.0% | |
ACAACATTATCAGCATTTGG+AGG | + | chr4.2:32019084-32019103 | MS.gene065889:CDS | 35.0% | |
ACCAATCGTAATTCGTGTAA+AGG | + | chr4.2:32018383-32018402 | MS.gene065889:CDS | 35.0% | |
ATAAAAGGAAGTCTGGCAAT+TGG | + | chr4.2:32018600-32018619 | MS.gene065889:CDS | 35.0% | |
ATATTGGTGGAAGTTGTTTG+GGG | + | chr4.2:32018089-32018108 | MS.gene065889:CDS | 35.0% | |
ATCGAATAGCAGTAGACATA+TGG | + | chr4.2:32017631-32017650 | MS.gene065889:CDS | 35.0% | |
ATCGTAGTTGGATGTATGAT+AGG | + | chr4.2:32017357-32017376 | MS.gene065889:CDS | 35.0% | |
ATGATAGGATCAATCCACAT+AGG | + | chr4.2:32017372-32017391 | MS.gene065889:CDS | 35.0% | |
CAAAGAATCATCAAGCTGAA+AGG | + | chr4.2:32019872-32019891 | MS.gene065889:CDS | 35.0% | |
CAAAGCAACATCATGCTAAA+AGG | + | chr4.2:32019584-32019603 | MS.gene065889:CDS | 35.0% | |
CTAGATGTTTCTTTCTTCGA+CGG | - | chr4.2:32019294-32019313 | None:intergenic | 35.0% | |
GAAACTTGAATTGTGGAAAG+AGG | + | chr4.2:32018823-32018842 | MS.gene065889:CDS | 35.0% | |
GAATATTGGTGGAAGTTGTT+TGG | + | chr4.2:32018087-32018106 | MS.gene065889:CDS | 35.0% | |
GGTACAAACACAAAATGGTA+AGG | + | chr4.2:32018763-32018782 | MS.gene065889:CDS | 35.0% | |
TAAAAGGAAGTCTGGCAATT+GGG | + | chr4.2:32018601-32018620 | MS.gene065889:CDS | 35.0% | |
TCATCATCATCATCATAGTG+AGG | - | chr4.2:32019904-32019923 | None:intergenic | 35.0% | |
TCCTCATCATTATCATAGTG+AGG | - | chr4.2:32019979-32019998 | None:intergenic | 35.0% | |
TTTCTCTCAGACAAAAAGCA+GGG | - | chr4.2:32017461-32017480 | None:intergenic | 35.0% | |
! | AAAGCATCATCAAGCTGAAA+GGG | + | chr4.2:32019447-32019466 | MS.gene065889:CDS | 35.0% |
! | AAATGAGTTTTCACCTCTCT+TGG | - | chr4.2:32017530-32017549 | None:intergenic | 35.0% |
! | AAGGAGGTACAAACACAAAA+TGG | + | chr4.2:32018758-32018777 | MS.gene065889:CDS | 35.0% |
! | AATTGCCAGACTTCCTTTTA+TGG | - | chr4.2:32018601-32018620 | None:intergenic | 35.0% |
! | AGTTTGGACTTTTTGTAGGT+GGG | + | chr4.2:32017966-32017985 | MS.gene065889:intron | 35.0% |
! | ATTGCCAGACTTCCTTTTAT+GGG | - | chr4.2:32018600-32018619 | None:intergenic | 35.0% |
! | CATCCTCACTATGATAATGA+TGG | + | chr4.2:32019826-32019845 | MS.gene065889:CDS | 35.0% |
! | CTTTCAGCTTGATGATTCTT+TGG | - | chr4.2:32019874-32019893 | None:intergenic | 35.0% |
! | TAGTTTGGACTTTTTGTAGG+TGG | + | chr4.2:32017965-32017984 | MS.gene065889:intron | 35.0% |
! | TCCTCACTATGATAATGATG+AGG | + | chr4.2:32019828-32019847 | MS.gene065889:CDS | 35.0% |
! | TCCTCACTATGATAATGATG+GGG | + | chr4.2:32019828-32019847 | MS.gene065889:CDS | 35.0% |
! | TCTTGTGAGCTTGATGTTTT+TGG | - | chr4.2:32019381-32019400 | None:intergenic | 35.0% |
!! | CGAAGACAATTTGTTAGATG+GGG | + | chr4.2:32019771-32019790 | MS.gene065889:CDS | 35.0% |
!! | CTTTTAGCATGATGTTGCTT+TGG | - | chr4.2:32019586-32019605 | None:intergenic | 35.0% |
!! | CTTTTGAGAGCATATCTGAA+AGG | - | chr4.2:32018256-32018275 | None:intergenic | 35.0% |
!! | GAAAGAAACATCTAGCTCTA+AGG | + | chr4.2:32019299-32019318 | MS.gene065889:CDS | 35.0% |
!! | GACGAAGACAATTTGTTAGA+TGG | + | chr4.2:32019769-32019788 | MS.gene065889:CDS | 35.0% |
!! | TCTGAAACTTGGAGAGTTTT+GGG | - | chr4.2:32017809-32017828 | None:intergenic | 35.0% |
!! | TCTTTTTAGCCACCCATAAA+AGG | + | chr4.2:32018585-32018604 | MS.gene065889:CDS | 35.0% |
!!! | TTTTTAGCTTGACGTTGCTT+TGG | - | chr4.2:32019949-32019968 | None:intergenic | 35.0% |
!!! | TTTTTAGCTTGAGGTTGCTT+TGG | - | chr4.2:32019802-32019821 | None:intergenic | 35.0% |
!!! | TTTTTAGCTTGTCGTTGCTT+TGG | - | chr4.2:32019658-32019677 | None:intergenic | 35.0% |
AAAGCAGCGTCAAGCTAAAA+GGG | + | chr4.2:32019516-32019535 | MS.gene065889:CDS | 40.0% | |
AAGCATCATCAAGCTGAAAG+GGG | + | chr4.2:32019448-32019467 | MS.gene065889:CDS | 40.0% | |
ACAATATCACGATCGTCTGA+AGG | + | chr4.2:32018739-32018758 | MS.gene065889:CDS | 40.0% | |
ACCTCATTGGATATGTGAAG+AGG | + | chr4.2:32018295-32018314 | MS.gene065889:CDS | 40.0% | |
AGCAACGACAAGCTAAAAAG+CGG | + | chr4.2:32019659-32019678 | MS.gene065889:CDS | 40.0% | |
AGGATCAATCCACATAGGAA+AGG | + | chr4.2:32017377-32017396 | MS.gene065889:CDS | 40.0% | |
AGGATGTAAGGGAATATTGG+TGG | + | chr4.2:32018076-32018095 | MS.gene065889:CDS | 40.0% | |
ATAACTTACCCTAGACCACA+GGG | - | chr4.2:32017866-32017885 | None:intergenic | 40.0% | |
ATATGTGAAGAGGCTTGGAA+GGG | + | chr4.2:32018305-32018324 | MS.gene065889:CDS | 40.0% | |
ATATTCCCTTACATCCTCTG+GGG | - | chr4.2:32018073-32018092 | None:intergenic | 40.0% | |
ATTGGATATGTGAAGAGGCT+TGG | + | chr4.2:32018300-32018319 | MS.gene065889:CDS | 40.0% | |
CAATATTCCCTTACATCCTC+TGG | - | chr4.2:32018075-32018094 | None:intergenic | 40.0% | |
CAGAGGATGTAAGGGAATAT+TGG | + | chr4.2:32018073-32018092 | MS.gene065889:CDS | 40.0% | |
CAGATATGCTCTCAAAAGTG+AGG | + | chr4.2:32018258-32018277 | MS.gene065889:CDS | 40.0% | |
CTAAGAACTCGTCTAGTGAA+TGG | - | chr4.2:32019267-32019286 | None:intergenic | 40.0% | |
CTCTCAAAAGTGAGGAAGAA+GGG | + | chr4.2:32018266-32018285 | MS.gene065889:CDS | 40.0% | |
CTGATGGGAAGGTTCTTATA+CGG | + | chr4.2:32017840-32017859 | MS.gene065889:CDS | 40.0% | |
CTTTCTCTCAGACAAAAAGC+AGG | - | chr4.2:32017462-32017481 | None:intergenic | 40.0% | |
GAAGGGTCTTAATGTCCATT+GGG | + | chr4.2:32018322-32018341 | MS.gene065889:CDS | 40.0% | |
GAATAGCAGTAGACATATGG+AGG | + | chr4.2:32017634-32017653 | MS.gene065889:CDS | 40.0% | |
GACGATCGTGATATTGTTTC+TGG | - | chr4.2:32018736-32018755 | None:intergenic | 40.0% | |
GCCTTTACACGAATTACGAT+TGG | - | chr4.2:32018387-32018406 | None:intergenic | 40.0% | |
GGAGTTTATTAAGAAGGCCA+AGG | + | chr4.2:32017430-32017449 | MS.gene065889:CDS | 40.0% | |
TAAGACCTCGTCTAGTGAAT+CGG | - | chr4.2:32020067-32020086 | None:intergenic | 40.0% | |
TAATGCAGGCTCAAGAACTT+GGG | + | chr4.2:32018540-32018559 | MS.gene065889:intron | 40.0% | |
TAGTTCAAGCCTTTCCTATG+TGG | - | chr4.2:32017389-32017408 | None:intergenic | 40.0% | |
TATAACTTACCCTAGACCAC+AGG | - | chr4.2:32017867-32017886 | None:intergenic | 40.0% | |
TCATACAGAGGATTCAGAAG+AGG | + | chr4.2:32017775-32017794 | MS.gene065889:CDS | 40.0% | |
TCATATGGAGGAATCAGAAG+AGG | + | chr4.2:32017715-32017734 | MS.gene065889:CDS | 40.0% | |
TCCCCATCATTATCATAGTG+AGG | - | chr4.2:32019832-32019851 | None:intergenic | 40.0% | |
TCCTCCATATGAGGAACTTT+GGG | - | chr4.2:32017707-32017726 | None:intergenic | 40.0% | |
TCTCAAAAGTGAGGAAGAAG+GGG | + | chr4.2:32018267-32018286 | MS.gene065889:CDS | 40.0% | |
TCTTCTGAATCCTCTGTATG+AGG | - | chr4.2:32017776-32017795 | None:intergenic | 40.0% | |
TCTTCTGATTCCTCCATATG+AGG | - | chr4.2:32017716-32017735 | None:intergenic | 40.0% | |
TGATCATGCTATGCATCTAG+AGG | + | chr4.2:32018961-32018980 | MS.gene065889:CDS | 40.0% | |
TGATGAGGATTCACTAGATG+AGG | + | chr4.2:32019486-32019505 | MS.gene065889:CDS | 40.0% | |
TTAATGCAGGCTCAAGAACT+TGG | + | chr4.2:32018539-32018558 | MS.gene065889:intron | 40.0% | |
TTCCTCCATATGAGGAACTT+TGG | - | chr4.2:32017708-32017727 | None:intergenic | 40.0% | |
TTGATATACCCATGATCACG+AGG | - | chr4.2:32018203-32018222 | None:intergenic | 40.0% | |
TTGTCTTCGTCATCATAGTG+AGG | - | chr4.2:32019760-32019779 | None:intergenic | 40.0% | |
! | ACCTCCATATGTGGAGTTTT+GGG | - | chr4.2:32017668-32017687 | None:intergenic | 40.0% |
! | ATCCTCTGTATGAGGAGTTT+TGG | - | chr4.2:32017768-32017787 | None:intergenic | 40.0% |
! | ATGATGACGATTTGCCAGAT+GGG | + | chr4.2:32019917-32019936 | MS.gene065889:CDS | 40.0% |
! | CAAAGCATCATCAAGCTGAA+AGG | + | chr4.2:32019446-32019465 | MS.gene065889:CDS | 40.0% |
! | CAGACTTTGCTTTAAACCTC+CGG | + | chr4.2:32018885-32018904 | MS.gene065889:CDS | 40.0% |
! | CATTCTGCTTGTCTGAAACT+TGG | - | chr4.2:32017820-32017839 | None:intergenic | 40.0% |
! | TCCTCTGTATGAGGAGTTTT+GGG | - | chr4.2:32017767-32017786 | None:intergenic | 40.0% |
!! | CTTTCAGCTTGATGATGCTT+TGG | - | chr4.2:32019448-32019467 | None:intergenic | 40.0% |
!! | GAATCGGTGTCATCATAAAG+AGG | - | chr4.2:32020051-32020070 | None:intergenic | 40.0% |
!! | GTCTGAAACTTGGAGAGTTT+TGG | - | chr4.2:32017810-32017829 | None:intergenic | 40.0% |
!! | TGAGTTTGTTAGTGGAGTTC+AGG | + | chr4.2:32017409-32017428 | MS.gene065889:CDS | 40.0% |
AAGCAGCGTCAAGCTAAAAG+GGG | + | chr4.2:32019517-32019536 | MS.gene065889:CDS | 45.0% | |
ACACACTTGCACATTGCACA+TGG | - | chr4.2:32017494-32017513 | None:intergenic | 45.0% | |
ATATCACGATCGTCTGAAGG+AGG | + | chr4.2:32018742-32018761 | MS.gene065889:CDS | 45.0% | |
CAAAAAGCAGGGTTGTTCCT+TGG | - | chr4.2:32017450-32017469 | None:intergenic | 45.0% | |
CAAAGCAGCGTCAAGCTAAA+AGG | + | chr4.2:32019515-32019534 | MS.gene065889:CDS | 45.0% | |
CAGACAAGCAGAATGCTGAT+GGG | + | chr4.2:32017825-32017844 | MS.gene065889:CDS | 45.0% | |
CATTGATGCAGTCCGTAAAG+AGG | + | chr4.2:32018985-32019004 | MS.gene065889:CDS | 45.0% | |
GAATGGTCATCATCATAGCG+AGG | - | chr4.2:32019250-32019269 | None:intergenic | 45.0% | |
GAATTGTGGAAAGAGGTTGC+TGG | + | chr4.2:32018830-32018849 | MS.gene065889:CDS | 45.0% | |
GATATGTGAAGAGGCTTGGA+AGG | + | chr4.2:32018304-32018323 | MS.gene065889:CDS | 45.0% | |
GCCTCTTCACATATCCAATG+AGG | - | chr4.2:32018299-32018318 | None:intergenic | 45.0% | |
GCGAATCCTCGTCATTATCA+TGG | - | chr4.2:32019693-32019712 | None:intergenic | 45.0% | |
GCTCTCAAAAGTGAGGAAGA+AGG | + | chr4.2:32018265-32018284 | MS.gene065889:CDS | 45.0% | |
GGAAGGGTCTTAATGTCCAT+TGG | + | chr4.2:32018321-32018340 | MS.gene065889:CDS | 45.0% | |
GGATCCCAAAACTCCACATA+TGG | + | chr4.2:32017661-32017680 | MS.gene065889:CDS | 45.0% | |
GGATCCCAAAGTTCCTCATA+TGG | + | chr4.2:32017700-32017719 | MS.gene065889:CDS | 45.0% | |
GGTCTTAATGTCCATTGGGA+GGG | + | chr4.2:32018326-32018345 | MS.gene065889:CDS | 45.0% | |
GGTGGCTAAAAAGAGCTCAT+CGG | - | chr4.2:32018579-32018598 | None:intergenic | 45.0% | |
GTGGCTAAAAAGAGCTCATC+GGG | - | chr4.2:32018578-32018597 | None:intergenic | 45.0% | |
TACAGAGGATTCAGAAGAGG+AGG | + | chr4.2:32017778-32017797 | MS.gene065889:CDS | 45.0% | |
TAGCAGTAGACATATGGAGG+AGG | + | chr4.2:32017637-32017656 | MS.gene065889:CDS | 45.0% | |
TATGGAGGAATCAGAAGAGG+AGG | + | chr4.2:32017718-32017737 | MS.gene065889:CDS | 45.0% | |
TATTTGGTCTGGACTGAGCA+TGG | + | chr4.2:32017575-32017594 | MS.gene065889:CDS | 45.0% | |
TCAGACAAGCAGAATGCTGA+TGG | + | chr4.2:32017824-32017843 | MS.gene065889:CDS | 45.0% | |
TCCCAAAACTCCACATATGG+AGG | + | chr4.2:32017664-32017683 | MS.gene065889:CDS | 45.0% | |
TCCCAAAACTCCTCATACAG+AGG | + | chr4.2:32017763-32017782 | MS.gene065889:CDS | 45.0% | |
TCCCAAAGTTCCTCATATGG+AGG | + | chr4.2:32017703-32017722 | MS.gene065889:CDS | 45.0% | |
TCCTCGTCATTATCATGGTG+AGG | - | chr4.2:32019688-32019707 | None:intergenic | 45.0% | |
TCGTCATCATCGTCATAGTG+AGG | - | chr4.2:32019616-32019635 | None:intergenic | 45.0% | |
TGATCACACCCACCACTATA+AGG | - | chr4.2:32018947-32018966 | None:intergenic | 45.0% | |
TGATGAGGATTCGCTACATG+AGG | + | chr4.2:32019990-32020009 | MS.gene065889:CDS | 45.0% | |
TGATGGGGATTCGTTACATG+AGG | + | chr4.2:32019843-32019862 | MS.gene065889:CDS | 45.0% | |
TGCTTTGGTAAAACCCCATC+TGG | - | chr4.2:32019787-32019806 | None:intergenic | 45.0% | |
TGTTGATGTGGCACTTAGCA+TGG | + | chr4.2:32018439-32018458 | MS.gene065889:CDS | 45.0% | |
! | ATGATGACGATTTGCCAGAC+GGG | + | chr4.2:32019626-32019645 | MS.gene065889:CDS | 45.0% |
! | CACCTCCATATGTGGAGTTT+TGG | - | chr4.2:32017669-32017688 | None:intergenic | 45.0% |
! | CTATGATGATGAGGATTCGC+TGG | + | chr4.2:32019411-32019430 | MS.gene065889:CDS | 45.0% |
! | CTCTTTACGGACTGCATCAA+TGG | - | chr4.2:32018987-32019006 | None:intergenic | 45.0% |
! | GATGATGACGATTTGCCAGA+CGG | + | chr4.2:32019625-32019644 | MS.gene065889:CDS | 45.0% |
! | GATGATGACGATTTGCCAGA+TGG | + | chr4.2:32019625-32019644 | MS.gene065889:CDS | 45.0% |
! | TCCTCACCATGATAATGACG+AGG | + | chr4.2:32019684-32019703 | MS.gene065889:CDS | 45.0% |
! | TGATGACGATTTGCCAGATG+GGG | + | chr4.2:32019918-32019937 | MS.gene065889:CDS | 45.0% |
! | TTTGCTTTAAACCTCCGGTG+TGG | + | chr4.2:32018890-32018909 | MS.gene065889:CDS | 45.0% |
!! | TTGTGAAAGCACCTGCTGAT+TGG | - | chr4.2:32019153-32019172 | None:intergenic | 45.0% |
!!! | CTTTTAGCTTGACGCTGCTT+TGG | - | chr4.2:32019517-32019536 | None:intergenic | 45.0% |
!!! | GAGCTTGATGTTTTTGGCGA+CGG | - | chr4.2:32019375-32019394 | None:intergenic | 45.0% |
!!! | GATGTTTTTGGCGACGGTTT+GGG | - | chr4.2:32019369-32019388 | None:intergenic | 45.0% |
!!! | GGATGTCGCTTTTTAGCTTG+AGG | - | chr4.2:32019811-32019830 | None:intergenic | 45.0% |
!!! | TGATGTTTTTGGCGACGGTT+TGG | - | chr4.2:32019370-32019389 | None:intergenic | 45.0% |
!! | ATATGATATAAAAAATATAA+GGG | - | chr4.2:32018665-32018684 | None:intergenic | 5.0% |
!! | TATATGATATAAAAAATATA+AGG | - | chr4.2:32018666-32018685 | None:intergenic | 5.0% |
AACGGGATGCAGGAGATAGA+TGG | + | chr4.2:32018794-32018813 | MS.gene065889:CDS | 50.0% | |
AAGGTTCTTATACGGCCCTG+TGG | + | chr4.2:32017848-32017867 | MS.gene065889:CDS | 50.0% | |
AAGTGTGAGTCAAGCTCGCA+GGG | + | chr4.2:32019171-32019190 | MS.gene065889:CDS | 50.0% | |
AATGGTAAGGCCTCCCAGAA+CGG | + | chr4.2:32018776-32018795 | MS.gene065889:CDS | 50.0% | |
ACATCCTCGCTACGATGATG+AGG | + | chr4.2:32019471-32019490 | MS.gene065889:CDS | 50.0% | |
ACGGGATGCAGGAGATAGAT+GGG | + | chr4.2:32018795-32018814 | MS.gene065889:CDS | 50.0% | |
AGAGGAGGAGGAATCAGAAG+AGG | + | chr4.2:32017733-32017752 | MS.gene065889:CDS | 50.0% | |
AGAGGATTCAGAAGAGGAGG+AGG | + | chr4.2:32017781-32017800 | MS.gene065889:CDS | 50.0% | |
CAAGCAGAATGCTGATGGGA+AGG | + | chr4.2:32017829-32017848 | MS.gene065889:CDS | 50.0% | |
CAGTAGACATATGGAGGAGG+AGG | + | chr4.2:32017640-32017659 | MS.gene065889:CDS | 50.0% | |
CCACATCAACATGAGCCTTG+CGG | - | chr4.2:32018430-32018449 | None:intergenic | 50.0% | |
CTCGGGAACCTTATAGTGGT+GGG | + | chr4.2:32018936-32018955 | MS.gene065889:CDS | 50.0% | |
CTTGGGATCCTCGTGATCAT+GGG | + | chr4.2:32018192-32018211 | MS.gene065889:CDS | 50.0% | |
GAATCCTCATCATCGTAGCG+AGG | - | chr4.2:32019478-32019497 | None:intergenic | 50.0% | |
GAGTCTCGGGAACCTTATAG+TGG | + | chr4.2:32018932-32018951 | MS.gene065889:CDS | 50.0% | |
GCCACCCATAAAAGGAAGTC+TGG | + | chr4.2:32018593-32018612 | MS.gene065889:CDS | 50.0% | |
GCCATCCAGTCACACTTTCA+GGG | + | chr4.2:32018024-32018043 | MS.gene065889:CDS | 50.0% | |
GGGCGACGAAACTTGAATTG+TGG | + | chr4.2:32018816-32018835 | MS.gene065889:CDS | 50.0% | |
GGGTCTTAATGTCCATTGGG+AGG | + | chr4.2:32018325-32018344 | MS.gene065889:CDS | 50.0% | |
GTCTCACTCCAGCGATAGAA+AGG | - | chr4.2:32018051-32018070 | None:intergenic | 50.0% | |
TAAAGGCTTCACCCTCCCAA+TGG | - | chr4.2:32018340-32018359 | None:intergenic | 50.0% | |
TACGGTAATGACGACGGCAA+CGG | - | chr4.2:32020095-32020114 | None:intergenic | 50.0% | |
TATCTCCTGCATCCCGTTCT+GGG | - | chr4.2:32018792-32018811 | None:intergenic | 50.0% | |
TCAGCGAAGTTACACCACAC+CGG | - | chr4.2:32018907-32018926 | None:intergenic | 50.0% | |
TCTCGGGAACCTTATAGTGG+TGG | + | chr4.2:32018935-32018954 | MS.gene065889:CDS | 50.0% | |
TCTTCCTGCACCTCCATATG+TGG | - | chr4.2:32017677-32017696 | None:intergenic | 50.0% | |
TGACGAGGATTCGCTACATG+AGG | + | chr4.2:32019699-32019718 | MS.gene065889:CDS | 50.0% | |
TGAGACCCCAGAGGATGTAA+GGG | + | chr4.2:32018065-32018084 | MS.gene065889:CDS | 50.0% | |
TGCGTGTGTGTGTGTGTTGA+TGG | + | chr4.2:32017934-32017953 | MS.gene065889:intron | 50.0% | |
TTATACGGCCCTGTGGTCTA+GGG | + | chr4.2:32017855-32017874 | MS.gene065889:CDS | 50.0% | |
TTCAGGGTCCTTTCTATCGC+TGG | + | chr4.2:32018040-32018059 | MS.gene065889:CDS | 50.0% | |
TTGTGGAAAGAGGTTGCTGG+TGG | + | chr4.2:32018833-32018852 | MS.gene065889:CDS | 50.0% | |
! | AACTCCACATATGGAGGTGC+AGG | + | chr4.2:32017670-32017689 | MS.gene065889:CDS | 50.0% |
! | AAGGACCCTGAAAGTGTGAC+TGG | - | chr4.2:32018032-32018051 | None:intergenic | 50.0% |
! | ACATATGGAGGTGCAGGAAG+AGG | + | chr4.2:32017676-32017695 | MS.gene065889:CDS | 50.0% |
! | ACCCTGAAAGTGTGACTGGA+TGG | - | chr4.2:32018028-32018047 | None:intergenic | 50.0% |
! | GCCAGACTTCCTTTTATGGG+TGG | - | chr4.2:32018597-32018616 | None:intergenic | 50.0% |
! | TGATGACGATTTGCCAGACG+GGG | + | chr4.2:32019627-32019646 | MS.gene065889:CDS | 50.0% |
!! | AAGAGTCGAGGTCGGTGTTA+TGG | + | chr4.2:32018857-32018876 | MS.gene065889:CDS | 50.0% |
!! | TGACACCGATTCACTAGACG+AGG | + | chr4.2:32020059-32020078 | MS.gene065889:CDS | 50.0% |
!! | TGGTGTAACTTCGCTGACTC+AGG | + | chr4.2:32018910-32018929 | MS.gene065889:CDS | 50.0% |
ACGGTAATGACGACGGCAAC+GGG | - | chr4.2:32020094-32020113 | None:intergenic | 55.0% | |
AGAAGGGGACGAGACCTCAT+TGG | + | chr4.2:32018282-32018301 | MS.gene065889:CDS | 55.0% | |
AGTGTGAGTCAAGCTCGCAG+GGG | + | chr4.2:32019172-32019191 | MS.gene065889:CDS | 55.0% | |
ATGGTAAGGCCTCCCAGAAC+GGG | + | chr4.2:32018777-32018796 | MS.gene065889:CDS | 55.0% | |
CAAGTGTGAGTCAAGCTCGC+AGG | + | chr4.2:32019170-32019189 | MS.gene065889:CDS | 55.0% | |
CCGCAAGGCTCATGTTGATG+TGG | + | chr4.2:32018427-32018446 | MS.gene065889:CDS | 55.0% | |
CGACGACGACTCTCTAGATG+AGG | + | chr4.2:32019555-32019574 | MS.gene065889:CDS | 55.0% | |
CGCCATCCAGTCACACTTTC+AGG | + | chr4.2:32018023-32018042 | MS.gene065889:CDS | 55.0% | |
CGGGATGCAGGAGATAGATG+GGG | + | chr4.2:32018796-32018815 | MS.gene065889:CDS | 55.0% | |
CTATCTCCTGCATCCCGTTC+TGG | - | chr4.2:32018793-32018812 | None:intergenic | 55.0% | |
CTGGTGGAAAGAGTCGAGGT+CGG | + | chr4.2:32018849-32018868 | MS.gene065889:CDS | 55.0% | |
CTTATACGGCCCTGTGGTCT+AGG | + | chr4.2:32017854-32017873 | MS.gene065889:CDS | 55.0% | |
GCGTGTTTAATCGCAGCAGC+AGG | - | chr4.2:32018006-32018025 | None:intergenic | 55.0% | |
GCTTGGGATCCTCGTGATCA+TGG | + | chr4.2:32018191-32018210 | MS.gene065889:CDS | 55.0% | |
GGAGGAATCAGAAGAGGAGG+AGG | + | chr4.2:32017721-32017740 | MS.gene065889:CDS | 55.0% | |
GGAGGAGGAATCAGAAGAGG+AGG | + | chr4.2:32017736-32017755 | MS.gene065889:CDS | 55.0% | |
GTGAGACCCCAGAGGATGTA+AGG | + | chr4.2:32018064-32018083 | MS.gene065889:CDS | 55.0% | |
GTTGCTGGTGGAAAGAGTCG+AGG | + | chr4.2:32018845-32018864 | MS.gene065889:CDS | 55.0% | |
TCAAGAACTTGGGCGGTCTG+TGG | + | chr4.2:32018550-32018569 | MS.gene065889:CDS | 55.0% | |
TGCAGGCTCAAGAACTTGGG+CGG | + | chr4.2:32018543-32018562 | MS.gene065889:intron | 55.0% | |
TGCTTTGGTAAGACCCCGTC+TGG | - | chr4.2:32019643-32019662 | None:intergenic | 55.0% | |
! | TATGGAGGTGCAGGAAGAGG+AGG | + | chr4.2:32017679-32017698 | MS.gene065889:CDS | 55.0% |
!! | CTTCGCTGACTCAGGAGTCT+CGG | + | chr4.2:32018918-32018937 | MS.gene065889:CDS | 55.0% |
!! | TTCGCTGACTCAGGAGTCTC+GGG | + | chr4.2:32018919-32018938 | MS.gene065889:CDS | 55.0% |
AACATGAGCCTTGCGGCCTG+TGG | - | chr4.2:32018423-32018442 | None:intergenic | 60.0% | |
GCGAAGTTACACCACACCGG+AGG | - | chr4.2:32018904-32018923 | None:intergenic | 60.0% | |
GTGCTGCGGCAGCCTCTTTA+CGG | - | chr4.2:32019000-32019019 | None:intergenic | 60.0% | |
GTTTCGACTCAGCTGCCTCC+TGG | - | chr4.2:32019066-32019085 | None:intergenic | 60.0% | |
TAATGACGACGGCAACGGGC+TGG | - | chr4.2:32020090-32020109 | None:intergenic | 60.0% | |
! | TTGTAGGTGGGCTCCTAGCG+CGG | + | chr4.2:32017978-32017997 | MS.gene065889:intron | 60.0% |
!! | GCTCTAGAGCGCCAATCAGC+AGG | + | chr4.2:32019139-32019158 | MS.gene065889:CDS | 60.0% |
AGAGGCTGCCGCAGCACATC+AGG | + | chr4.2:32019003-32019022 | MS.gene065889:CDS | 65.0% | |
AGTCCACACCACAGGCCGCA+AGG | + | chr4.2:32018412-32018431 | MS.gene065889:CDS | 65.0% | |
GGCAGCCTCCTGATGTGCTG+CGG | - | chr4.2:32019014-32019033 | None:intergenic | 65.0% | |
TCGCTGGAGTGAGACCCCAG+AGG | + | chr4.2:32018056-32018075 | MS.gene065889:CDS | 65.0% | |
! | CTCCTGCATCCCGTTCTGGG+AGG | - | chr4.2:32018789-32018808 | None:intergenic | 65.0% |
AGCTGCCTCCTGGCGTGCTG+TGG | - | chr4.2:32019056-32019075 | None:intergenic | 70.0% | |
CGCAGGGGACGCCAATCAGC+AGG | + | chr4.2:32019187-32019206 | MS.gene065889:CDS | 70.0% | |
GAGCCTTGCGGCCTGTGGTG+TGG | - | chr4.2:32018418-32018437 | None:intergenic | 70.0% | |
GGCCTCCCAGAACGGGATGC+AGG | + | chr4.2:32018784-32018803 | MS.gene065889:CDS | 70.0% | |
GGCGGAGCAGTCCACACCAC+AGG | + | chr4.2:32018404-32018423 | MS.gene065889:CDS | 70.0% | |
GGCTGCCGCAGCACATCAGG+AGG | + | chr4.2:32019006-32019025 | MS.gene065889:CDS | 70.0% | |
GGCTGCCTCCTGACGTGCTG+CGG | - | chr4.2:32019035-32019054 | None:intergenic | 70.0% | |
GGAGGCAGCCACAGCACGCC+AGG | + | chr4.2:32019045-32019064 | MS.gene065889:CDS | 75.0% | |
GGAGGCTGCCGCAGCACGTC+AGG | + | chr4.2:32019024-32019043 | MS.gene065889:CDS | 75.0% | |
GGCAGCCACAGCACGCCAGG+AGG | + | chr4.2:32019048-32019067 | MS.gene065889:CDS | 75.0% | |
GGCTGCCGCAGCACGTCAGG+AGG | + | chr4.2:32019027-32019046 | MS.gene065889:CDS | 75.0% | |
!! | GCAGCAGCAGGCGCCGCGCT+AGG | - | chr4.2:32017994-32018013 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 32017353 | 32020119 | 32017353 | ID=MS.gene065889 |
chr4.2 | mRNA | 32017353 | 32020119 | 32017353 | ID=MS.gene065889.t1;Parent=MS.gene065889 |
chr4.2 | exon | 32017353 | 32017876 | 32017353 | ID=MS.gene065889.t1.exon1;Parent=MS.gene065889.t1 |
chr4.2 | CDS | 32017353 | 32017876 | 32017353 | ID=cds.MS.gene065889.t1;Parent=MS.gene065889.t1 |
chr4.2 | exon | 32017984 | 32018110 | 32017984 | ID=MS.gene065889.t1.exon2;Parent=MS.gene065889.t1 |
chr4.2 | CDS | 32017984 | 32018110 | 32017984 | ID=cds.MS.gene065889.t1;Parent=MS.gene065889.t1 |
chr4.2 | exon | 32018182 | 32018460 | 32018182 | ID=MS.gene065889.t1.exon3;Parent=MS.gene065889.t1 |
chr4.2 | CDS | 32018182 | 32018460 | 32018182 | ID=cds.MS.gene065889.t1;Parent=MS.gene065889.t1 |
chr4.2 | exon | 32018548 | 32018649 | 32018548 | ID=MS.gene065889.t1.exon4;Parent=MS.gene065889.t1 |
chr4.2 | CDS | 32018548 | 32018649 | 32018548 | ID=cds.MS.gene065889.t1;Parent=MS.gene065889.t1 |
chr4.2 | exon | 32018737 | 32020119 | 32018737 | ID=MS.gene065889.t1.exon5;Parent=MS.gene065889.t1 |
chr4.2 | CDS | 32018737 | 32020119 | 32018737 | ID=cds.MS.gene065889.t1;Parent=MS.gene065889.t1 |
Gene Sequence |
Protein sequence |